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Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Adec Preview Generated PDF File
Records ofthc ¥Yestelll AlIstral/{1Il MlIsclIlIl19: 4h9-472 (1999) Short communication The distribution of Australian cave fishes W.F. Humphreys Museum of Natural Science, Western Australian Museum, Francis Street, Perth, Western Australia hOOD, Australia INTRODUCTION Barrow Island stygofauna have been sampled Worldwide only 84 species of fish are known to widely (W.F. Humphreys, unpublished). occur in hypogean waters with 13 instances of two The number of sites from which M. veritas has species and three instances of three species been recorded has increased steadily over time occurring in sympatry (Proudlove 1997; G.S. (Table 1: bottom line) and there is still an upward Proudlove, pers. comm. 1999). Two species of blind trend in comparable data for O. candidum. However, cave fish are known from Australia, namely the a number of access sites have been lost in the Blind Gudgeon, Milyeringa veritas Whitely, 1945 interval from infilling (Table 1; C361, AB5, Site D), (Perciformes: Gobiidae) and the Cave Eel, drying (C-282, C-362) or siltation (C-23), and a Ophisternon candidum (Mees, 1962) (Synbranch number of sites are close to planned developments iformes: Synbranchidae). They are found in (C25, AB5), are within periurban areas (C23, C27, sympatry on the Cape Range peninsula of C105, C282, C361, C-452, C-495, WC 15, WC 44), northwestern Australia. Both species are listed as or in an unmanaged military area (C28, C506, C endangered under Western Australian fauna 507). While there has been a significant extension of legislation. This note presents the known occurrence the range of M. veritas to Barrow Island, the of these cave fishes and includes a major range inclusive known range of the two species on the extension of M. -
Annotated Bibliography for Barrow Island Terrestrial Invertebrates
RECORDS OF THE WESTERN AUSTRALIAN MUSEUM 83 135–144 (2013) DOI: 10.18195/issn.0313-122x.83.2013.135-144 SUPPLEMENT Annotated bibliography for Barrow Island terrestrial invertebrates Christopher K. Taylor Department of Environment and Agriculture, Curtin University, GPO Box U1987, Perth, Western Australia 6845, Australia. Email: [email protected] ABSTRACT – A bibliography is provided of publications treating terrestrial invertebrates on Barrow Island. A brief overview is also given of natural history and invertebrate collections on Barrow Island. KEYWORDS: Arthropoda, Insecta, Arachnida, Gastropoda, publication history INTRODUCTION During the late 1800s Barrow Island was utilised at various times by pastoralists, guano miners, pearl As part of this special issue on the terrestrial and turtle fishers, and slavers (Hook et al. 2004; invertebrate fauna of Barrow Island in Western ‘Supreme Court—Civil Side’, West Australian, 26 Australia, we take the opportunity to present May 1887; ‘The native question’, Daily News [Perth], a bibliography of previous publications on the 16 February 1905). If any of these individuals subject. A more general bibliography of Barrow were interested in collecting invertebrates, their Island’s natural history was previously collated by endeavours in that field have not been recorded for Smith et al. (2006). The current bibliography differs posterity. from that in gathering not only publications for which Barrow Island was the primary focus, but J.T. Tunney of the Western Australian Museum also those in which Barrow Island specimens were spent six weeks on Barrow Island in 1901 (‘News considered as part of a broader study. and notes’, West Australian, 22 March 1901). -
Gorgon Gas Project Additional Area Subterranean Fauna Desktop Review
Gorgon Gas Project Additional Area Subterranean Fauna Desktop Review Prepared for Chevron Australia December 2013 Doc ID: G1-NT-REP00000221 Doc ID: G1-NT-REP00000221 Gorgon Gas Project Additional Areas Subterranean Fauna Desktop Review © Biota Environmental Sciences Pty Ltd 2013 ABN 49 092 687 119 Level 1, 228 Carr Place Leederville Western Australia 6007 Ph: (08) 9328 1900 Fax: (08) 9328 6138 Project No.: 950 Prepared by: Garth Humphreys Document Quality Checking History Version: 0 Peer review: Roy Teale Version: 0 Director review: Roy Teale Version: 0 Format review: Garth Humphreys Approved for issue: Garth Humphreys This document has been prepared to the requirements of the client identified on the cover page and no representation is made to any third party. It may be cited for the purposes of scientific research or other fair use, but it may not be reproduced or distributed to any third party by any physical or electronic means without the express permission of the client for whom it was prepared or Biota Environmental Sciences Pty Ltd. This report has been designed for double-sided printing. Hard copies supplied by Biota are printed on recycled paper. Doc ID: G1-NT-REP00000221 Cube:Current:950 (Additional Area Subfauna Review):Documents:Subfauna v3.docx 3 Gorgon Gas Project Additional Areas Subterranean Fauna Desktop Review 4 Cube:Current:950Doc ID: G1-NT-REP00000221 (Additional Area Subfauna Review):Documents:Subfauna v3.docx Gorgon Gas Project Additional Areas Subterranean Fauna Desktop Review Gorgon Gas Project Additional Areas -
The First Record of a Trans-Oceanic Sister-Group Relationship Between Obligate Vertebrate Troglobites
The First Record of a Trans-Oceanic Sister-Group Relationship between Obligate Vertebrate Troglobites Prosanta Chakrabarty1*, Matthew P. Davis2, John S. Sparks3 1 Louisiana State University, Museum of Natural Science, Department of Biological Sciences, Baton Rouge, Louisiana, United States of America, 2 The Field Museum, Department of Zoology, Chicago, Illinois, United States of America, 3 American Museum of Natural History, Department of Ichthyology, Division of Vertebrate Zoology, New York, New York, United States of America Abstract We show using the most complete phylogeny of one of the most species-rich orders of vertebrates (Gobiiformes), and calibrations from the rich fossil record of teleost fishes, that the genus Typhleotris, endemic to subterranean karst habitats in southwestern Madagascar, is the sister group to Milyeringa, endemic to similar subterranean systems in northwestern Australia. Both groups are eyeless, and our phylogenetic and biogeographic results show that these obligate cave fishes now found on opposite ends of the Indian Ocean (separated by nearly 7,000 km) are each others closest relatives and owe their origins to the break up of the southern supercontinent, Gondwana, at the end of the Cretaceous period. Trans-oceanic sister-group relationships are otherwise unknown between blind, cave-adapted vertebrates and our results provide an extraordinary case of Gondwanan vicariance. Citation: Chakrabarty P, Davis MP, Sparks JS (2012) The First Record of a Trans-Oceanic Sister-Group Relationship between Obligate Vertebrate Troglobites. PLoS ONE 7(8): e44083. doi:10.1371/journal.pone.0044083 Editor: Michael Schubert, Ecole Normale Supe´rieure de Lyon, France Received January 10, 2012; Accepted July 31, 2012; Published August 28, 2012 Copyright: ß 2012 Chakrabarty et al. -
Notes on the Genus Draculoides Harvey (Schizomida: Hubbardiidae), with the Description of a New Troglobitic Species
Records of the Westem Australian Museum Supplement No. 52: 183-189 (1995). Notes on the genus Draculoides Harvey (Schizomida: Hubbardiidae), with the description of a new troglobitic species Mark S. Harvey and W.F. Humphreys Western Australian Museum, Francis Street, Perth, Western Australia 6000, Australia Abstract -A second species of Draculoides, D. bramstokeri sp. nov., is described from coastal caves of Barrow Island and Cape Range, Western Australia. The species differs from D. vinei (Harvey) in the shape and setation of the male flagellum and the presence of a female gonopod. The diagnoses of Draculoides and D. vinei are emended. Both species included in the genus are cavernicoles. INTRODUCTION Type species The Australian schizomid fauna has recently Schizomus vinei Harvey, 1988, by original been shown to consist of a diverse assemblage of designation. species attributable to five genera (Harvey 1992). Amongst the most peculiar was a genus known Diagnosis only from a single cavernicolous species, Pedipalpal trochanter without mesal spur. Draculoides vinei (Harvey), which was shown to be Movable cheliceraI finger with 1-2 accessory teeth. abundant in the deep limestone caves of Cape Female genitalia with or without gonopod, and Range, Western Australia (Vine et al. 1988; with 4 anteriorly directed ducts, sometimes Humphreys et al. 1989; Humphreys 1990; Harvey subdivided, and sometimes connected basally et al. 1993). The discovery of a second species in before connection with bursa. Male flagellum the coastal caves of the Cape and in shallow laterally compressed. limestone caves on Barrow Island provides an opportunity to test the generic characters used by Remarks Harvey (1992) to define Draculoides, and to examine Draculoides was erected for a single species, D. -
Ms. Hollis M. Redding SBA Towers II LLC One Research Drive
Transportation Land Development Environmental S e r v i c e s 54 Tuttle Place Middletown, Connecticut 06457 860 632-1500 FAX 860 632-7879 Memorandum To: Ms. Hollis M. Redding Date: May 5, 2010 SBA Towers II LLC One Research Drive, Suite 200 C Westborough, MA 01581 Project No.: 40999.30 From: Linda Vanderveer, Biologist Re: Connecticut Siting Council Docket No. 396 Dean Gustafson, Senior Environmental Migratory Bird Impact Evaluation Scientist Proposed SBA Towers II LLC Facility 49 Brainerd Road, East Lyme, CT At the request of the Connecticut Siting Council at its Public Hearing on April 22, 2010 for Docket No. 396, Vanasse Hangen Brustlin, Inc. (VHB) provides the following summary of potential impacts to migratory birds from a proposed wireless telecommunications facility (Facility) proposed by SBA Towers II LLC (SBA) at 49 Brainerd Road in East Lyme, Connecticut. Summary Flyway: Facility is within the Atlantic Flyway Closest Waterfowl Focus Area: CT River/Tidal Wetlands Complex (4.5± miles west) Closest Important Bird Area: Connecticut College Arboretum (7± miles northeast) Closest Migratory Waterfowl/Critical Habitat Area: Pattagansett River (0.25± mile southeast) Potentially Impacted Species: American Black Duck, Mallard Recommended Seasonal Restriction(s): None Analysis of Potential Migratory Bird Impacts Provided below is a detailed analysis of potential impacts to migratory birds from the proposed SBA Facility. Flyways The proposed Facility is located in a forested and residentially developed area near the Connecticut coast, west of the Pattagansett River. The Connecticut coast is part of the Atlantic Flyway, one of four generalized regional pathways (Atlantic, Mississippi, Central, and Pacific) followed by migratory birds traveling to and from summering and wintering grounds. -
The Subterranean Fauna of Barrow Island, North-Western Australia: 10 Years On
RECORDS OF THE WESTERN AUSTRALIAN MUSEUM 83 145–158 (2013) SUPPLEMENT The subterranean fauna of Barrow Island, north-western Australia: 10 years on Garth Humphreys1,2,3,8, Jason Alexander1, Mark S. Harvey2,3,4,5,6 and William F. Humphreys2,3,7 1 Biota Environmental Sciences Pty Ltd, PO Box 155, Leederville, Western Australia 6903, Australia. 2 Department of Terrestrial Zoology, Western Australian Museum, Locked Bag 49, Welshpool DC, Western Australia 6986, Australia. 3 School of Animal Biology, University of Western Australia, Crawley, Western Australia 6009, Australia. 4 Division of Invertebrate Zoology, American Museum of Natural History, 79th Street at Central Park West, New York, New York 10024-5192, U.S.A. 5 Department of Entomology, California Academy of Sciences, Golden Gate Park, San Francisco, CA 94103-3009, U.S.A. 6 School of Natural Sciences, Edith Cowan University, Joondalup, Western Australia 6009, Australia. 7 School of Earth and Environmental Sciences, University of Adelaide, South Australia 5005, Australia 8 Corresponding author: Email: [email protected] ABSTRACT – Barrow Island, situated off the north-west Australian coast, is well recognised for its subterranean fauna values. Sampling for both stygobitic and troglobitic fauna has taken place on the island since 1991, and Humphreys (2001) summarised the then current state of knowledge of the island’s subterranean fauna. Sampling for impact assessment purposes on the island over the past decade has substantially increased the recorded species richness of Barrow Island. The number of documented stygal taxa has more than doubled since 2001, from 25 to 63 species now known. Troglobitic diversity has also substantially increased, with six species known in 2001 and 19 troglobitic taxa known today. -
American Museum Novitates
AMERICAN MUSEUM NOVITATES Number 3764, 28 pp. December 11, 2012 Revision of the Endemic Malagasy Cavefish Genus Typhleotris (Teleostei: Gobiiformes: Milyeringidae), with Discussion of its Phylogenetic Placement and Description of a New Species JOHN S. SPARKS1 AND Prosanta chakraBartY2 ABstract Troglobitic cavefishes of the genus Typhleotris, endemic to coastal southwestern Mada- gascar, are taxonomically reviewed and a new darkly pigmented species, Typhleotris mara- rybe, is described from an isolated karst sinkhole on the coastal plain below the Mahafaly Plateau. The new species, known only from Grotte de Vitane (Vitany) near the town of Itampolo, is unique among blind cavefishes in being uniformly darkly pigmented, rather than fully depigmented or exceptionally light in coloration. In addition to its dark coloration (vs. depigmented, translucent white body in congeners), the new species can be distinguished from its two congeners, Typhleotris madagascariensis and T. pauliani, by the sculpted, bony (vs. fleshy) appearance of its head with strongly protruding lateral ethmoid, sphenotic, and pterotic bones, and an elevated vertebral count. Key Words: Eocene, Grotte de Vitane, karst, Mahafaly Plateau, sinkhole, subterranean, Typhleotris mararybe, sp. nov., Vitany IntrodUction Troglobitic freshwater fishes, the typically blind and pigment-free obligate cave-dwelling lin- eages, represent an enigmatic and intriguing, yet poorly understood, group of vertebrates 1 American Museum of Natural History, Department of Ichthyology, Division of Vertebrate Zoology, Central Park West at 79th Street, New York, NY 10024. 2 Museum of Natural Science (Fish Section), Department of Biological Sciences, Louisiana State University, 119 Foster Hall, Baton Rouge, LA 70803. Copyright © American Museum of Natural History 2012 ISSN 0003-0082 2 American MUseUM Novitates NO. -
A New Genus and Species of Blind Sleeper (Teleostei: Eleotridae) from Oaxaca, Mexico: First Obligate Cave Gobiiform in the Western Hemisphere Author(S): Stephen J
A New Genus and Species of Blind Sleeper (Teleostei: Eleotridae) from Oaxaca, Mexico: First Obligate Cave Gobiiform in the Western Hemisphere Author(s): Stephen J. Walsh and Prosanta Chakrabarty Source: Copeia, 104(2):506-517. Published By: The American Society of Ichthyologists and Herpetologists DOI: http://dx.doi.org/10.1643/CI-15-275 URL: http://www.bioone.org/doi/full/10.1643/CI-15-275 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Copeia 104, No. 2, 2016, 506–517 A New Genus and Species of Blind Sleeper (Teleostei: Eleotridae) from Oaxaca, Mexico: First Obligate Cave Gobiiform in the Western Hemisphere Stephen J. Walsh1 and Prosanta Chakrabarty2 Caecieleotris morrisi, new genus and species of sleeper (family Eleotridae), is described from a submerged freshwater cave in a karst region of the northern portion of the State of Oaxaca, Mexico, R´ıo Papaloapan drainage, Gulf of Mexico basin. -
Notifiable Instrument
Australian Capital Territory Nature Conservation Protected Native Species List 2015 (No 1)* Notifiable Instrument NI2015–317 made under the Nature Conservation Act 2014 s 111 (Minister to make protected native species list) s 407 (Protected fish, invertebrates, native plants and native animals to be protected species) 1 Name of instrument This instrument is the Nature Conservation Protected Native Species List 2015 (No 1). 2 Commencement This instrument commences on the day after notification. 3 List of threatened species I make the protected native species list and relevant categories in the schedule. Note 1: Section 407 of the Nature Conservation Act 2014 (the Act) is a transitional provision. Section 407 refers to declarations made under section 34 of the former Nature Conservation Act 1980 (1980 Act) to the effect that a fish, invertebrate, native plant or native animal is protected. Under section 407 any fish, invertebrate, native plant or native animal so declared at the time of commencement of the Act is taken to be eligible to be included in the restricted trade category on the protected native species list under section 112 (Protected native species list—eligibility) of the Act. Note 2: The fish, invertebrates, native plants and native animals listed in the schedule were previously declared as protected under the 1980 Act (refer to Nature Conservation Declaration of Protected and Exempt Flora and Fauna 2002 (No 2) DI2003-6). Note 3: Section 111 of the Act requires the Minister to make a list of native species that are protected