Effects of Knowledge, Attitudes, and Practices of Primary Care Providers on Antibiotic Selection, United States Guillermo V

Total Page:16

File Type:pdf, Size:1020Kb

Effects of Knowledge, Attitudes, and Practices of Primary Care Providers on Antibiotic Selection, United States Guillermo V Effects of Knowledge, Attitudes, and Practices of Primary Care Providers on Antibiotic Selection, United States Guillermo V. Sanchez, Rebecca M. Roberts, Alison P. Albert, Darcia D. Johnson, and Lauri A. Hicks Appropriate selection of antibiotic drugs is critical to not clear whether nonadherence is related to lack of famil- optimize treatment of infections and limit the spread of iarity with clinical practice guidelines or if other factors in- antibiotic resistance. To better inform public health efforts fluence antibiotic selection once a diagnosis is established. to improve prescribing of antibiotic drugs, we conducted Published qualitative studies that have examined an- in-depth interviews with 36 primary care providers in the tibiotic selection among primary care providers (PCPs) United States (physicians, nurse practitioners, and physi- are outdated and focus on non-US–based physicians; they cian assistants) to explore knowledge, attitudes, and self- reported practices regarding antibiotic drug resistance and do not include nurse practitioners or physician assistants, antibiotic drug selection for common infections. Participants who together comprise >25% of the US primary care work- were generally familiar with guideline recommendations for force (15–22). The objectives of this study are to explore antibiotic drug selection for common infections but did not US PCP knowledge, attitudes, and self-reported practices always comply with them. Reasons for nonadherence in- (KAPs) concerning antibiotic therapy, assess factors that cluded the belief that nonrecommended agents are more influence provider antibiotic choice, and provide an update likely to cure an infection, concern for patient or parent sat- on PCP attitudes regarding antibiotic resistance. isfaction, and fear of infectious complications. Providers inconsistently defined broad- and narrow-spectrum antibi- Methods otic agents. There was widespread concern for antibiotic We conducted in-depth interviews by digitally record- resistance; however, it was not commonly considered when ed telephone calls, and transcribed the recordings to text to selecting therapy. Strategies to encourage use of first-line agents are needed in addition to limiting unnecessary pre- accurately and reliably assess PCP KAPs. The qualitative scribing of antibiotic drugs. method of an open-ended interview by telephone was cho- sen to ensure candid and truthful answers from participants. We composed a screening questionnaire to recruit physi- ntibiotic prescribing guidelines establish standards of cians, nurse practitioners (NPs), and physician assistants Acare, help focus efforts on quality improvement, and (PAs) from a nationwide marketing database in the United have been shown to improve patient outcomes (1–3). Many States. We initially contacted and screened potential partic- guidelines emphasize the importance of diagnostic certain- ipants (online Technical Appendix Section A, wwwnc.cdc. ty for the management of bacterial upper respiratory tract gov/EID/article/20/12/14-0331-Techapp1.pdf) using tele- infections and promote β-lactam agents, such as amoxicil- phones, email, and fax transmission of documents. Inclu- lin or amoxicillin-clavulanate, as the preferred first-line sion criteria included self-reporting of spending >50% of therapy (4–6). Studies indicate that health care providers medical practice time in direct patient contact in a primary often do not adhere to established clinical practice guide- care setting, >30 years of age, and fluency in the English lines for the management of common infections (7–9). Pre- language. Interviewees were excluded from this study if scribing rates for second-line, broad-spectrum antibiotics they had an immediate family member who was employed among outpatients have increased, contributing to a grow- in an industry that could represent a conflict of interest, in- ing problem of antibiotic-resistant infections (10–14). It is cluding advertising or public relations, the federal govern- ment, market research, news media, or the pharmaceutical Author affiliation: Centers for Disease Control and Prevention, industry; if they had board certification in a subspecialty Atlanta, Georgia, USA outside of primary care; or if they had practiced medicine DOI: http://dx.doi.org/10.3201/eid2012.140331 >30 years at the time of recruitment. Emerging Infectious Diseases • www.cdc.gov/eid • Vol. 20, No. 12, December 2014 2041 RESEARCH Thirty-six PCPs were selected for the study. Special- was given a clinical vignette about a patient (online Tech- ties for the 27 physician participants selected included nical Appendix, Section C) who had a diagnosis of an pediatrics (n = 9), family medicine (n = 9), and internal acute bacterial infection: acute otitis media (AOM) for medicine (n = 9). Among PAs (n = 4) and NPs (n = 5), pediatricians, acute bacterial rhinosinusitis for internists, 6 practiced in family medicine settings and 3 practiced in acute uncomplicated cystitis for family practitioners, and pediatrics. Provider specialty, years in practice, and demo- group A streptococcal pharyngitis for PAs and NPs. The graphic information are described in Table 1. participant was asked to explain his or her rationale in Interviews were conducted during May 2013. One choosing an antibiotic agent and why other PCPs might professional moderator who had >25 years of moderating choose nonrecommended antibiotics. For the purposes of experience conducted all interviews. Based on a discussion this study, antibiotics considered to be broad-spectrum guide prepared by our research team (data not shown), par- include penicillins containing β-lactamase inhibitors ticipants were first informed of the sponsoring organization (e.g., amoxicillin/clavulanate), second through fifth gen- (Centers for Disease Control and Prevention, Atlanta, GA, eration cephalosporins, macrolides, quinolones, and lin- USA), the planned use of data, and presence of listeners; comycin derivatives. Narrow-spectrum agents include they were then asked “warm-up” questions about the prac- penicillins (e.g., amoxicillin), first generation cephalospo- tice setting in which the participant worked and the patient rins, sulfonamides, and nitrofurantoin. Each participant populations whom they served. Next, each interview pro- received a cash incentive after the interview in exchange ceeded through an ordered list of open-ended questions on for participating. self-reported antibiotic prescribing practices, perceived Interviews were transcribed by project staff, and each prescribing practices of their peers, attitudes toward clini- member of the research team either listened to interview cal practice guidelines for common bacterial infections, recordings or read corresponding interview transcripts. knowledge of narrow- versus broad-spectrum antibiotic Relevant excerpts were coded into compilations of refer- agents, preferred resources and methods for medical edu- ences to specific themes and were used to identify the most cation and antibiotic treatment, and attitudes toward anti- frequent responses to discussion topics outlined in the dis- biotic resistance. cussion guide. We identified common themes using both Participants were provided a worksheet before the inductive and deductive methods that were reviewed by interview (online Technical Appendix, Section B) which all authors. Author disagreement on theme selections were asked them to rank each of 12 factors on the basis of discussed until a consensus was met. If no consensus was its perceived influence on antibiotic selection when an met by most study authors, the theme was excluded from antibiotic is indicated (e.g., illness severity, patient de- our results. We performed in-depth analyses of themes by mand for an antibiotic, or clinical practice guidelines). reading and coding transcribed responses using Nvivo 9 Worksheet answers were discussed and recorded during (QSR International, Burlington, MA). This study was re- the interview. viewed and approved for exemption status by the Human To assess compliance with clinical practice guidelines Research Protection Office of the Centers for Disease Con- and to evaluate clinical decision-making, each participant trol and Prevention. Table 1. Characteristisc of primary care providers interviewed for Results knowledge, attitudes, and practices in antibiotic drug selection, We conducted 36 interviews, each lasting ≈45 min- United States* Characteristic Physician, n = 27 NP or PA, n = 9 utes. Through analysis of provider in-depth interviews, Sex several common themes regarding antibiotic prescribing M 18 1 and antibiotic resistance were identified (Table 2). F 9 8 Race/ethnicity White 18 9 Antibiotic Selection Black 4 0 PCPs generally cited little difficulty selecting anti- Asian 3 0 biotic treatments for common infections, but indicated Hispanic 1 0 Other 1 0 that allergies, complicated medical histories, and recur- Years in practice rent infections regularly make antibiotic selection more <10 5 5 challenging. Previous experience and familiarity with an 10–20 11 3 21–30 11 1 agent were frequently cited as influential factors when Medical specialty choosing antibiotic therapy. Results from the ranking ex- Pediatrics 9 3 ercise suggest that illness severity, medical history, and Family medicine 9 6 clinical practice guidelines were important considerations Internal medicine 9 0 *NP, nurse practitioner; PA, physician assistant. across all specialties. 2042 Emerging Infectious Diseases • www.cdc.gov/eid • Vol. 20, No. 12, December
Recommended publications
  • Antibiotic Use Guidelines for Companion Animal Practice (2Nd Edition) Iii
    ii Antibiotic Use Guidelines for Companion Animal Practice (2nd edition) iii Antibiotic Use Guidelines for Companion Animal Practice, 2nd edition Publisher: Companion Animal Group, Danish Veterinary Association, Peter Bangs Vej 30, 2000 Frederiksberg Authors of the guidelines: Lisbeth Rem Jessen (University of Copenhagen) Peter Damborg (University of Copenhagen) Anette Spohr (Evidensia Faxe Animal Hospital) Sandra Goericke-Pesch (University of Veterinary Medicine, Hannover) Rebecca Langhorn (University of Copenhagen) Geoffrey Houser (University of Copenhagen) Jakob Willesen (University of Copenhagen) Mette Schjærff (University of Copenhagen) Thomas Eriksen (University of Copenhagen) Tina Møller Sørensen (University of Copenhagen) Vibeke Frøkjær Jensen (DTU-VET) Flemming Obling (Greve) Luca Guardabassi (University of Copenhagen) Reproduction of extracts from these guidelines is only permitted in accordance with the agreement between the Ministry of Education and Copy-Dan. Danish copyright law restricts all other use without written permission of the publisher. Exception is granted for short excerpts for review purposes. iv Foreword The first edition of the Antibiotic Use Guidelines for Companion Animal Practice was published in autumn of 2012. The aim of the guidelines was to prevent increased antibiotic resistance. A questionnaire circulated to Danish veterinarians in 2015 (Jessen et al., DVT 10, 2016) indicated that the guidelines were well received, and particularly that active users had followed the recommendations. Despite a positive reception and the results of this survey, the actual quantity of antibiotics used is probably a better indicator of the effect of the first guidelines. Chapter two of these updated guidelines therefore details the pattern of developments in antibiotic use, as reported in DANMAP 2016 (www.danmap.org).
    [Show full text]
  • HEDIS®1 Public Comment Overview
    HEDIS®1 Public Comment Overview HEDIS Overview HEDIS is a set of standardized performance measures designed to ensure that purchasers and consumers can reliably compare the performance of health plans. It also serves as a model for emerging systems of performance measurement in other areas of health care delivery. HEDIS is maintained by NCQA, a not-for-profit organization committed to evaluating and publicly reporting on the quality of health plans, ACOs, physicians, and other organizations. The HEDIS measurement set consists of 92 measures across 6 domains of care. Items available for public comment are being considered for HEDIS Measurement Year 2022, which will be published in August 2021. HEDIS Measure Development Process NCQA’s consensus development process involves rigorous review of published guidelines and scientific evidence, as well as feedback from multi-stakeholder advisory panels. The NCQA Committee on Performance Measurement, a diverse panel of independent scientists and representatives from health plans, consumers, federal policymakers, purchasers and clinicians, oversees the evolution of the HEDIS measurement set. Numerous measurement advisory panels provide clinical and technical knowledge required to develop the measures. Additional HEDIS expert panels and the Technical Measurement Advisory Panel provide invaluable assistance by identifying methodological issues and giving feedback on new and existing measures. Synopsis NCQA seeks public feedback on proposed new HEDIS measures, revisions to existing measures and proposed measure retirement. Reviewers are asked to submit comments to NCQA in writing via the Public Comment website by 11:59 p.m. (ET), Thursday, March 11. Submitting Comments Submit all comments via NCQA’s Public Comment website at https://my.ncqa.org/ Note: NCQA does not accept comments via mail, email or fax.
    [Show full text]
  • Situation Report on the Active Substance Amoxicillin
    INSPECTION DIVISION Starting materials inspection division Date: 30/03/2016 Version: 1 public Status: Final SITUATION REPORT ON THE ACTIVE SUBSTANCE AMOXICILLIN I. INTRODUCTION .................................................................................................................................. 2 II. BACKGROUND .................................................................................................................................. 3 III. APPLICABLE REGULATIONS/GUIDELINES IN FORCE ................................................................ 3 IV. AMOXICILLIN SUPPLY .................................................................................................................... 3 IV.1. Process for obtaining amoxicillin ................................................................................................ 3 IV.2. Sources of supply of medicinal product manufacturing sites in France ..................................... 5 V. EVALUATION OF AMOXICILLIN MANUFACTURERS BY PHARMACEUTICAL SITE .................. 8 VI. REVIEW OF RECENT INSPECTIONS .............................................................................................. 8 VI.1. Collaboration between competent authorities ............................................................................ 8 VI.2. Monitoring of amoxicillin (sodium or trihydrate) manufacturing sites by international authorities since 2010 ..........................................................................................................................................
    [Show full text]
  • Employment and Activity Limitations Among Adults with Chronic Obstructive Pulmonary Disease — United States, 2013
    Morbidity and Mortality Weekly Report Weekly / Vol. 64 / No. 11 March 27, 2015 Employment and Activity Limitations Among Adults with Chronic Obstructive Pulmonary Disease — United States, 2013 Anne G. Wheaton, PhD1, Timothy J. Cunningham, PhD1, Earl S. Ford, MD1, Janet B. Croft, PhD1 (Author affiliations at end of text) Chronic obstructive pulmonary disease (COPD) is a group a random-digit–dialed telephone survey (landline and cell of progressive respiratory conditions, including emphysema phone) of noninstitutionalized civilian adults aged ≥18 years and chronic bronchitis, characterized by airflow obstruction that includes various questions about respondents’ health and and symptoms such as shortness of breath, chronic cough, risk behaviors. Response rates for BRFSS are calculated using and sputum production. COPD is an important contributor standards set by the American Association of Public Opinion to mortality and disability in the United States (1,2). Healthy Research Response Rate Formula #4.† The response rate is the People 2020 has several COPD-related objectives,* including number of respondents who completed the survey as a pro- to reduce activity limitations among adults with COPD. To portion of all eligible and likely eligible persons. The median assess the state-level prevalence of COPD and the associa- survey response rate for all states, territories, and DC in 2013 tion of COPD with various activity limitations among U.S. was 46.4%, and ranged from 29.0% to 60.3%. Additional adults, CDC analyzed data from the 2013 Behavioral Risk information is presented in the BRFSS 2013 Summary Data Factor Surveillance System (BRFSS). Among U.S. adults in Quality Report.§ all 50 states, the District of Columbia (DC), and two U.S.
    [Show full text]
  • The Selection and Use of Essential Medicines
    WHO Technical Report Series 1006 The Selection and Use of Essential Medicines Report of the WHO Expert Committee, 2017 (including the 20th WHO Model List of Essential Medicines and the 6th Model List of Essential Medicines for Children) WHO Technical Report Series 1006 The Selection and Use of Essential Medicines Report of the WHO Expert Committee, 2017 (including the 20th WHO Model List of Essential Medicines and the 6th WHO Model List of Essential Medicines for Children) This report contains the collective views of an international group of experts and does not necessarily represent the decisions or the stated policy of the World Health Organization The selection and use of essential medicines: report of the WHO Expert Committee, 2017 (including the 20th WHO model list of essential medicines and the 6th WHO model list of essential medicines for children). (WHO technical report series ; no. 1006) ISBN 978-92-4-121015-7 ISSN 0512-3054 © World Health Organization 2017 Some rights reserved. This work is available under the Creative Commons Attribution-NonCommercial- ShareAlike 3.0 IGO licence (CC BY-NC-SA 3.0 IGO; https://creativecommons.org/licenses/by-nc-sa/3.0/igo). Under the terms of this licence, you may copy, redistribute and adapt the work for non-commercial purposes, provided the work is appropriately cited, as indicated below. In any use of this work, there should be no suggestion that WHO endorses any specific organization, products or services. The use of the WHO logo is not permitted. If you adapt the work, then you must license your work under the same or equivalent Creative Commons licence.
    [Show full text]
  • Together, Let's Save Antibiotics
    TOGETHER, LET’S SAVE ANTIBIOTICS Proposals of the special working group for keeping antibiotics effective Together, let’s save antibiotics Written by : Dr Jean CARLET and Pierre LE COZ 2 TOGETHER, LET’S SAVE ANTIBIOTICS REPORT FROM THE SPECIAL WORKING GROUP FOR KEEPING ANTIBIOTICS EFFECTIVE June 2015 TOGETHER, LET’S SAVE ANTIBIOTICS 3 Acknowledgements My sincere thanks go first and foremost to Marisol Touraine, the French Minister of Social Affairs, Health and Women’s Rights, for entrusting me with this assignment. I would also like to thank the cabinet ministers, especially Professor Djillali Annane and Dr Jérôme Salomon for their well-informed advice. I am grateful to Professor Benoît Vallet, Director-General for Health, for his encouragements throughout this assignment, and to Dr Marie-Hélène Loulergue, Deputy-Director of Infection Risk Prevention, her assistant Dr Bernadette Worms and their team for their warm welcome. I would like to highlight the involvement and commitment of the working group coordinators, Dr Bruno Coignard, Deputy Director of the Department of Infectious Diseases at the French Institute for Public Health Surveillance (InVS), Professor Céline Pulcini, infectious diseases consultant at Nancy Teaching Hospital (CHU), Ms Claude Rambaud, Vice-President of the Collectif Inter-associatif Sur la Santé (CISS), Mr Alain-Michel Ceretti, Founder and Chairman of LIEN, Professor Jocelyne Arquembourg, lecturer at the University of Paris III – Sorbonne Nouvelle, Ms Florence Séjourné, Managing Director of the biotech Da Volterra,
    [Show full text]
  • Towards a New Global Business Model for Antibiotics
    Towards a New Global Business Model for Antibiotics Global Business Model for a New Towards Chatham House Report Edited by Charles Clift, Unni Gopinathan, Chantal Morel, Kevin Outterson, John-Arne Røttingen and Anthony So Towards a New Global Business Model for Antibiotics Edited by Charles Clift, Gopinathan, and Anthony John-ArneSo Outterson, Charles Chantal Unni Kevin Røttingen by Morel, Edited Delinking Revenues from Sales Report from the Chatham House Working Group on New Antibiotic Business Models Chatham House Chatham House Report Edited by Charles Clift, Unni Gopinathan, Chantal Morel, Kevin Outterson, John-Arne Røttingen and Anthony So October 2015 Towards a New Global Business Model for Antibiotics Delinking Revenues from Sales Report from the Chatham House Working Group on New Antibiotic Business Models Chatham House, the Royal Institute of International Affairs, is an independent policy institute based in London. Our mission is to help build a sustainably secure, prosperous and just world. The Royal Institute of International Affairs Chatham House 10 St James’s Square London SW1Y 4LE T: +44 (0) 20 7957 5700 F: + 44 (0) 20 7957 5710 www.chathamhouse.org Charity Registration No. 208223 © The Royal Institute of International Affairs, 2015 Chatham House, the Royal Institute of International Affairs, does not express opinions of its own. The opinions expressed in this publication are the responsibility of the authors. All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means, electronic or mechanical including photocopying, recording or any information storage or retrieval system, without the prior written permission of the copyright holder.
    [Show full text]
  • (12) Patent Application Publication (10) Pub. No.: US 2010/0028334 A1 Cottarel Et Al
    US 20100028334A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2010/0028334 A1 Cottarel et al. (43) Pub. Date: Feb. 4, 2010 (54) COMPOSITIONS AND METHODS TO Publication Classification POTENTIATE COLISTIN ACTIVITY (51) Int. Cl. A638/12 (2006.01) (75) Inventors: Guillaume Cottarel, Mountain AOIN 37/00 (2006.01) View, CA (US); Jamey A 6LX 39/395 (2006.01) Wierzbowski, Stoneham, MA (US) A6IP3L/04 (2006.01) Correspondence Address: CI2O I/68 (2006.01) RONALDI. EISENSTEIN (52) U.S. Cl. ................... 424/130.1: 514/2: 514/9: 435/6 100 SUMMER STREET, NIXON PEABODY LLP BOSTON, MA 02110 (US) (57) ABSTRACT A pharmaceutical composition comprising an antimicrobial (73) Assignee: TRUSTEES OF BOSTON agent and an enhancer of an antimicrobial agent, wherein the UNIVERSITY, Boston, MA (US) enhancer of an antimicrobial agent is an inhibitor of gene, that by inactivating the gene product potentiates the effectiveness (21) Appl. No.: 12/519,336 of the antimicrobial agent. In some embodiments, the phar maceutical composition further comprises a pharmaceuti (22) PCT Filed: Dec. 13, 2007 cally acceptable carrier. In some embodiments, the antimi crobial agent is an antimicrobial peptide Such as a polymyxin, (86). PCT No.: PCT/US07/87397 for example but not limited to colistin. In some embodiments of the present invention provides methods to treat and/or S371 (c)(1), prevent infection of a Subject with a microorganism by (2), (4) Date: Jun. 15, 2009 administering a pharmaceutical composition comprising an antimicrobial agent and an enhancer of an antimicrobial Related U.S. Application Data agent. In some embodiments, the present invention provides (60) Provisional application No.
    [Show full text]
  • Synergistic Effect of Abietic Acid with Oxacillin Against Methicillin-Resistant Staphylococcus Pseudintermedius
    antibiotics Article Synergistic Effect of Abietic Acid with Oxacillin against Methicillin-Resistant Staphylococcus pseudintermedius Elisabetta Buommino 1,* , Adriana Vollaro 2 , Francesca P. Nocera 3, Francesca Lembo 1, Marina DellaGreca 4 , Luisa De Martino 3 and Maria R. Catania 2 1 Department of Pharmacy, University of Naples Federico II, 80131 Naples, Italy; [email protected] 2 Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, 80131 Naples, Italy; [email protected] (A.V.); [email protected] (M.R.C.) 3 Department of Veterinary Medicine and Animal Production, University of Naples Federico II, 80137 Naples, Italy; [email protected] (F.P.N.); [email protected] (L.D.M.) 4 Department of Chemical Sciences, University of Naples Federico II, 80126 Naples, Italy; [email protected] * Correspondence: [email protected]; Tel.: +39-081-678510 Abstract: Resin acids are valued in traditional medicine for their antiseptic properties. Among these, abietic acid has been reported to be active against methicillin-resistant Staphylococcus aureus (MRSA) strains. In veterinary healthcare, the methicillin-resistant Staphylococcus pseudintermedius (MRSP) strain is an important reservoir of antibiotic resistance genes including mecA. The incidence of MRSP has been increasing, and treatment options in veterinary medicine are partial. Here, we investigated the antimicrobial and antibiofilm properties of abietic acid against three MRSP and two methicillin- susceptible Staphylococcus pseudintermedius (MSSP) strains, isolated from diseased pet animals and human wound samples. Abietic acid showed a significant minimal inhibitory concentration (MIC) value ranging from 32 to 64 µg/mL (MRSPs) and 8 µg/mL (MSSP). By checkerboard method we demonstrated that abietic acid increased oxacillin susceptibility of MRSP strains, thus showing a Citation: Buommino, E.; Vollaro, A.; synergistic interaction with oxacillin.
    [Show full text]
  • THESIS for DOCTORAL DEGREE (Ph.D.)
    From the DEPARTMENT OF LABORATORY MEDICINE Karolinska Institutet, Stockholm, Sweden MULTIDRUG-RESISTANT ENTEROBACTERALES IN OMAN: MOLECULAR EPIDEMIOLOGY AND THERAPEUTIC INSIGHTS Hissa M. Al-Farsi Stockholm 2021 Cover image: A scanning electron microscopic (SEM) of extended-spectrum β-lactamase- producing (ESBL) Escherichia coli. The image was created by Alissa Eckert (2013) and obtained from the Public Health Image Library (PHIL) with no copyright restrictions. All previously published papers were reproduced with permission from the publisher. Published by Karolinska Institutet. Printed by US-AB, Stockholm, Sweden. © Hissa M. Al-Farsi, 2021 ISBN 978-91-8016-088-9 Multidrug-resistant Enterobacterales in Oman: Molecular Epidemiology and Therapeutic Insights THESIS FOR DOCTORAL DEGREE (Ph.D.) By Hissa M. Al-Farsi Principal Supervisor: Opponent: Prof. Christian Giske Dr. Teresa Coque Karolinska Institutet Ramón y Cajal Institute for Bio Health Research Department of Laboratory Medicine (IRYCIS), Madrid, Spain. Division of Clinical Microbiology Department of Microbiology Division of Microbial Biology and Infections Co-supervisor(s): Assoc. Prof. Peter Bergman Examination Board: Karolinska Institutet Assoc. Prof. Åsa Sjöling Department of Laboratory Medicine Karolinska Institutet Division of Clinical Microbiology Department of Microbiology, Tumor and Cell Biology. Stockholm, Sweden. Dr. Maarten Coorens Karolinska University Hospital Prof. Mikael Rhen Department of clinical Microbiology Karolinska Institutet Department of Microbiology, Tumor
    [Show full text]
  • The Antibiotic Crisis: Time to Wake Up!
    THE ANTIBIOTIC CRISIS: TIME TO WAKE UP! The extent of the problem is enormous and alarming: In the European Union alone, 30,000 people die every year due to antibiotic resistance. In the United States, this figure is at least 23,000. Many more spend their lives suffering from significant physical disabilities. The still widespread idea that antibiotic resistance is some vague negative scenario of the future is clearly no longer true. The threat is real, it‘s here to stay and the time to act is now. Get an overview of the extent of the antibiotic crisis: how resistance develops, how it spreads and what role we all play - and what it specifically means today and in the future. Listen and watch what leading experts have to say and the alternatives and smart solutions on which researchers are currently working to outwit highly adaptable pathogens. Scientists, governments and global organizations are collecting data, attempting to formulate rules and action plans and implement programs to curb antibiotic resistance and its consequen- ces. The fight has already begun, its outcome has yet to be determined. To prevent falling back to the medical Middle Ages where every infection would potentially be a death sentence, every one of us needs to be aware of our responsibility - and face up to it. ANTIBIOTIC RESISTANCE What does “antibiotic resistance” mean to you? A severely ill patient in hospital, suffering from a germ that cannot be killed by any antibiotic known to man? This image is of course true, but it is only part of the picture.
    [Show full text]
  • Genome Mining and Prospects for Antibiotic Discovery 1
    Available online at www.sciencedirect.com ScienceDirect Genome mining and prospects for antibiotic discovery 1 Lucy Foulston Natural products are a rich source of bioactive compounds that NPs are synthesized by dedicated enzymes, which are have been used successfully in the areas of human health from usually encoded by genes co-located in a region of the infectious disease to cancer; however, traditional fermentation- bacterial genome known as a biosynthetic gene cluster based screening has provided diminishing returns over the last (BGC). In the age of high-throughput genome sequencing, 20–30 years. Solutions to the unmet need of resistant bacterial it has become apparent that microbial genomes can encode infection are critically required. Technological advances in large numbers of BGCs, suggesting that they have the high-throughput genomic sequencing, coupled with ever- potential to produce many more NPs than have been decreasing cost, are now presenting a unique opportunity for identified through conventional fermentation-based the reinvigoration of natural product discovery. Bioinformatic screening [1]. The assignment of known NPs to the BGCs methods can predict the propensity of a microbial strain to that encode their production has enabled the determina- produce molecules with novel chemical structures that could tion of the ‘rules’ governing their synthesis (‘Retrospective have new mechanisms of action in bacterial growth inhibition. Genome Mining’; Figure 1). In turn, this has facilitated the This review highlights how this potential can be harnessed; with development of BGC predictive tools such as antiSMASH a focus on engineering the expression of silent biosynthetic [3] and PRISM [4], and the establishment of BGC data- gene clusters predicted to encode novel antibiotics.
    [Show full text]