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Monitoring Recovery Trends in Key Spring Chinook Habitat: Annual Report 2010 Publication Date: March 31, 2010

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Monitoring Recovery Trends in Key Spring Chinook Habitat: Annual Report 2010 Publication Date: March 31, 2010 Monitoring Recovery Trends in Key Spring Chinook Habitat: Annual Report 2010 publication date: March 31, 2010 Authors: Dale A. McCullough, Casey Justice, Seth White, Rishi Sharma, Denise Kelsey, David Graves, Nicole Tursich, Robert Lessard, and Henry Franzoni Technical Report 10-11 Columbia River Inter-Tribal Fish Commission 700 NE Multnomah St, Ste 1200, Portland OR 97232 · (503)238-0667 · www.critfc.org Funding for this work came from the Columbia Basin Fish Accords (2008-2018), a ten-year tribal/federal partnership between the Bonneville Power Administration, Bureau of Reclamation, Columbia River Inter-Tribal Fish Commission, The Confederated Tribes of the Umatilla Indian Reservation, The Confederated Tribes of the Warm Springs Reservation of Oregon, US Army Corps of Engineers, and The Confederated Tribes and Bands of the Yakama Nation. Annual Report (2010) Monitoring recovery trends in key spring Chinook habitat Columbia River Inter-Tribal Fish Commission Authors: Dale A. McCullough, Casey Justice, Seth White, Rishi Sharma, Denise Kelsey, David Graves, Nicole Tursich, Robert Lessard, and Henry Franzoni Project Number: 2009-004-00 Proposer: CRITFC Short Description: Monitoring recovery trends in key spring Chinook habitat Province(s): Blue Mountain Subbasin(s): Grande Ronde Contact Name: Dale A. McCullough Contact email: [email protected] 1 Table of Contents A : 165. Produce Environmental Compliance Documentation ..................................................................... 4 B : 191. Watershed Coordination - Coordinate with regional agencies, tribes, and landowners ................ 4 C : 148. Install Flow Measuring Device - Install flow depth gauges at two channel cross-sections ............. 8 D : 157. Collect/Generate/Validate Field and Lab Data – Collect water temperature and streamflow data ...................................................................................................................................................................... 8 E : 156. Develop RM&E Methods and Designs - Review and develop monitoring protocols and statistical designs ........................................................................................................................................................ 11 F : 160. Create/Manage/Maintain Database - Develop and manage fish habitat condition database ...... 17 G : 162. Analyze/Interpret Data - Summarize preliminary findings ............................................................ 17 H : 161. Disseminate Raw/Summary Data and Results -Present findings and procedures in professional meetings...................................................................................................................................................... 18 I : 183. Produce Journal Article - Produce journal publications on fish/habitat relationships ................... 20 J : 119. Manage and Administer Projects – Project Administration ........................................................... 23 K : 132. Produce (Annual) Progress Report - Annual Report ...................................................................... 24 List of Appendices Appendix A CRITFC Comments on CHaMP Appendix B HabitatEntryForms 1.2, User Manual, February 17, 2011 Appendix C Intragravel Dissolved Oxygen, Hydraulic Conductivity, and Vertical Hydraulic Gradient (head) Appendix D Evaluation of Surface Sediment Particle Composition using a GIS-Simulation of a Stream Reach 2 Appendix E Riparian metrics for potential natural vegetation mapping in the Grande Ronde River Appendix F Database Development Appendix G Notes on how the CTUIR water temperature data were collected Appendix H Conceptual Framework, Methods, and Field Test of a Stream Classification in the Grande Ronde River Basin Appendix I FLIR Data Collection and Analysis Appendix J Analysis of Sediment Size in Catherine Creek, Minam River, and Upper Grande Ronde River Appendix K Summary of Stream Temperature in the Upper Grande Ronde River and Catherine Creek during Summer 2010 Appendix L Summary of 2010 Stream Flow and Hydrologic Data Resources in the Grande Ronde River basin Appendix M List of Files in the Grande Ronde Geodatabase Appendix N ABR proposal for Macroinvertebrate Sample Processing and Analysis 3 A : 165. Produce Environmental Compliance Documentation Provide proof of all EC and permits to BPA permit-NOAA A. Stream work permit-NOAA B. Stream work permit-USFWS On June 2, 2010 the USFWS sent Jennifer Stolz a memo concerning the permit for our instream work in the Grande Ronde, Catherine Creek, and the Minam River. The memo subject was: proposed CRITFC Accord Monitoring Project, Grande Ronde Subbasin, Union and Wallowa Counties, Oregon-Informal Consultation (FWS reference 13420-2010-I-0112). This memo provided the USFWS’s concurrence on this project in accordance with the ESA of 1973. On June 8, 2010 we received a letter from William W. Stelle, Regional Administrator of NOAA in response to our May 24, 2010 permit request with the subject: Endangered Species Act Section 7 Informal Consultation and Magnuson-Stevens Fishery Conservation and Management Act Essential Fish Habitat Consultation for the Columbia River Inter-Tribal Fish Commission’s (CRITFC’s) proposal to conduct stream and riparian monitoring in the upper Grande Ronde River, Minam River, and Catherine Creek, Oregon. NOAA concurred that the proposed actions in our Accords habitat monitoring project are “not likely to adversely affect (NLAA) critical habitat or species listed as threatened or endangered under the Endangered Species Act (ESA).” B : 191. Watershed Coordination - Coordinate with regional agencies, tribes, and landowners Description: Coordination with other entities involved in M&E and data collection in the Grande Ronde and Upper Columbia under the ISEMP work. Agencies involved include NMFS, ODFW, CTUIR, Nez Perce Tribe, EPA, BOR, USGS. Coordination with the specified agencies in the Columbia is needed to initiate and sustain work. Provide peer review of monitoring plans of other agencies and tribes and seek peer review of CRITFC plans and progress. CRITFC participates in appropriate regional forums (e.g. PNAMP), and individually with other agencies to improve the comparability of results from tribal projects with similar efforts within the interior Columbia Basin. Share information, data, scientific literature, expertise in developing monitoring plans that have highly reliable methods and a spatially stratified and statistically sound sampling design. Host pre- and post-field-season workshops with habitat monitoring teams from member tribes and with the CHaMP group. These workshops will be used to standardize and refine sampling protocols, training material and methods, and sampling designs among our member tribes and associated partner agencies. This is essential as there are numerous BPA and NOAA projects doing similar work in other basins like the Upper Columbia, S.F. Salmon and the John Day. This project is akin to the others and will give us a better cross-sectional coverage to make inferences for the Columbia River (e.g., in evaluating whether habitat quality is adequate for salmonid survival to specific lifecycle stages). 4 Deliverable Specification: Coordination with the specified agencies in the Columbia is needed to initiate and sustain work. Provide peer review of monitoring plans of other agencies and tribes and seek peer review of CRITFC plans and progress. Participate in appropriate regional forums (e.g., PNAMP), and individually with other agencies, to improve the comparability of results from tribal projects with similar efforts within the interior Columbia Basin. Share information, data, scientific literature, expertise in developing monitoring plans that have highly reliable methods and a spatially stratified and statistically sound sampling design. Host pre- and post-field-season workshops with habitat monitoring teams from member tribes. These workshops will be used to standardize sampling protocols, training material and methods, and sampling designs among our member tribes. A. Coordinate with regional agencies, tribes, and landowners CRITFC coordinated with other entities involved in M&E and data collection in the Grande Ronde and Upper Columbia. Agencies involved will be NMFS, BPA, PNAMP, ODFW, Grande Ronde Watershed Council, Umatilla Tribe (CTUIR), and Nez Perce Tribe. Land owner co-ordination is essential as we will need to have owner permission to collect data in some areas. This will also require co-ordination with the USFS as it will be essential for data sharing. We also coordinated with BPA and NOAA when it became apparent that BPA would fund ODFW in addition to CRITFC for habitat monitoring in the Grande Ronde and Catherine Creek. NOAA is developing a procedure known as CHaMP (Columbia Habitat Monitoring Program), which is a Scientific Protocol for Salmonid Habitat Surveys. CRITFC staff reviewed three versions of CHaMP and provided written and verbal recommendations to the CHaMP development team for revisions. In addition, CRITFC attended a meeting of the ISRP on February 10, 2011 in which the CHaMP team presented an overview of their methodology. CRITFC was able to present written and verbal recommendations at this meeting for needed revisions to the monitoring protocol. See Appendix A for the CRITFC comments on CHaMP submitted to the ISEMP group and the ISRP. In late 2008 CRITFC hosted all four member tribal habitat staff for a meeting to discuss plans for tribal M&E. At this meeting CRITFC presented its proposed habitat
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