Light and Vision in the Deep-Sea Benthos: I
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Petition to List the Black Teatfish, Holothuria Nobilis, Under the U.S. Endangered Species Act
Before the Secretary of Commerce Petition to List the Black Teatfish, Holothuria nobilis, under the U.S. Endangered Species Act Photo Credit: © Philippe Bourjon (with permission) Center for Biological Diversity 14 May 2020 Notice of Petition Wilbur Ross, Secretary of Commerce U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected], [email protected] Dr. Neil Jacobs, Acting Under Secretary of Commerce for Oceans and Atmosphere U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected] Petitioner: Kristin Carden, Oceans Program Scientist Sarah Uhlemann, Senior Att’y & Int’l Program Director Center for Biological Diversity Center for Biological Diversity 1212 Broadway #800 2400 NW 80th Street, #146 Oakland, CA 94612 Seattle,WA98117 Phone: (510) 844‐7100 x327 Phone: (206) 324‐2344 Email: [email protected] Email: [email protected] The Center for Biological Diversity (Center, Petitioner) submits to the Secretary of Commerce and the National Oceanographic and Atmospheric Administration (NOAA) through the National Marine Fisheries Service (NMFS) a petition to list the black teatfish, Holothuria nobilis, as threatened or endangered under the U.S. Endangered Species Act (ESA), 16 U.S.C. § 1531 et seq. Alternatively, the Service should list the black teatfish as threatened or endangered throughout a significant portion of its range. This species is found exclusively in foreign waters, thus 30‐days’ notice to affected U.S. states and/or territories was not required. The Center is a non‐profit, public interest environmental organization dedicated to the protection of native species and their habitats. -
Aposematic Coloration
Preprint for: Joron, M. 2003. In Encyclopedia of insects (R. T. Cardé & V. H. Resh, eds), pp. 39-45. Academic Press, New York. Aposematic Coloration Mathieu Joron Leiden University nsects attract collectors’ attention because they are ex- tremely diverse and often bear spectacular colors. To I biologists, however, bright coloration has been a con- stantly renewed puzzle because it makes an insect a highly FIGURE 1 Pseudosphinx tetrio hawk moth caterpillar from the Peruvian conspicuous prey to prospective predators. Charles Darwin Amazon showing a combination of red and black, classical colors used by aposematic insects. These larvae feed on toxic latex-sapped trees in understood that bright colors or exaggerated morphologies the Apocynaceae. Length 14 cm. (Photograph © M. Joron, 1999.) could evolve via sexual selection. However, he felt sexual selection could not account for the conspicuous color pattern Unprofitability is difficult to define, and even more difficult of non-reproductive larvae in, for example, Pseudosphinx to measure. It is certainly contextually defined, because the hawk moth caterpillars (Fig. 1). In a reply to Darwin about propensity of an animal to eat something is highly dependent this puzzle, Alfred R. Wallace proposed that bright colors on its level of hunger and its ability to use the prey for energy could advertise the unpalatability of the caterpillars to experi- once eaten. Palatability (i.e., the predator’s perception of prey enced predators. Indeed, prey that are not edible to predators profitability), greatly determines whether the predator will or are predicted to gain by exhibiting conspicuous and very rec- will not eat the prey. -
Diversity and Phylogeography of Southern Ocean Sea Stars (Asteroidea)
Diversity and phylogeography of Southern Ocean sea stars (Asteroidea) Thesis submitted by Camille MOREAU in fulfilment of the requirements of the PhD Degree in science (ULB - “Docteur en Science”) and in life science (UBFC – “Docteur en Science de la vie”) Academic year 2018-2019 Supervisors: Professor Bruno Danis (Université Libre de Bruxelles) Laboratoire de Biologie Marine And Dr. Thomas Saucède (Université Bourgogne Franche-Comté) Biogéosciences 1 Diversity and phylogeography of Southern Ocean sea stars (Asteroidea) Camille MOREAU Thesis committee: Mr. Mardulyn Patrick Professeur, ULB Président Mr. Van De Putte Anton Professeur Associé, IRSNB Rapporteur Mr. Poulin Elie Professeur, Université du Chili Rapporteur Mr. Rigaud Thierry Directeur de Recherche, UBFC Examinateur Mr. Saucède Thomas Maître de Conférences, UBFC Directeur de thèse Mr. Danis Bruno Professeur, ULB Co-directeur de thèse 2 Avant-propos Ce doctorat s’inscrit dans le cadre d’une cotutelle entre les universités de Dijon et Bruxelles et m’aura ainsi permis d’élargir mon réseau au sein de la communauté scientifique tout en étendant mes horizons scientifiques. C’est tout d’abord grâce au programme vERSO (Ecosystem Responses to global change : a multiscale approach in the Southern Ocean) que ce travail a été possible, mais aussi grâce aux collaborations construites avant et pendant ce travail. Cette thèse a aussi été l’occasion de continuer à aller travailler sur le terrain des hautes latitudes à plusieurs reprises pour collecter les échantillons et rencontrer de nouveaux collègues. Par le biais de ces trois missions de recherches et des nombreuses conférences auxquelles j’ai activement participé à travers le monde, j’ai beaucoup appris, tant scientifiquement qu’humainement. -
Swimming Deep-Sea Holothurians (Echinodermata: Holothuroidea) on the Northern Mid-Atlantic Ridge*
Zoosymposia 7: 213–224 (2012) ISSN 1178-9905 (print edition) www.mapress.com/zoosymposia/ ZOOSYMPOSIA Copyright © 2012 · Magnolia Press ISSN 1178-9913 (online edition) Swimming deep-sea holothurians (Echinodermata: Holothuroidea) on the northern Mid-Atlantic Ridge* ANTONINA ROGACHEVA1,3, ANDREY GEBRUK1 & CLAUDIA H.S. ALT2 1 P.P. Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia 2 National Oceanography Centre, University of Southampton, Southampton, United Kingdom 3 Corresponding author, E-mail: [email protected] *In: Kroh, A. & Reich, M. (Eds.) Echinoderm Research 2010: Proceedings of the Seventh European Conference on Echinoderms, Göttingen, Germany, 2–9 October 2010. Zoosymposia, 7, xii + 316 pp. Abstract The ability to swim was recorded in 17 of 32 species of deep-sea holothurians during the RRS James Cook ECOMAR cruise in 2010 to the Mid-Atlantic Ridge. Holothurians were observed, photographed, and video recorded using the ROV Isis at four sites around the Charlie-Gibbs Fracture Zone at approximate depths of 2,200–2,800 m. For eleven species swimming is reported for the first time. A number of swimming species were observed on rocks, cliffs and steep slopes with taluses. These habitats are unusual for deep-sea holothurians, which are traditionally common on flat areas with soft sediment rich in detritus. Three species were found exclusively on cliffs. Swimming may provide an advantage in cliff habitats that are inaccessible to most epibenthic deposit-feeders. Key words: sea cucumbers, benthopelagic species, diversity, Northern Atlantic Ocean Introduction Mid-ocean ridges remain one of the least studied environments in the ocean. They are characterised by remoteness, high relief, very complicated topography and complex current regimes. -
Excretion of Zooplankton and Benthos
PART IV: ASSIMILAT ION EFF ICI ENCY, EGESTION, AND EXCRETION OF ZOOPLANKTON AND BENTHOS I ntroduction 203 . Assimilat ion (A) i s t he f ood absorbed f rom a n i ndividual 's digestive syst em. Assimilation efficiency (A/G) is the proportion o f co ns umption (G) actuall y ab sorbed (Sushchenya 1969 , Odum 19 71, Wetzel 1975 ) . Although the t e rm A/G i s usua lly used in reference t o i ndividual o r ga ni sms , it also can be app lied to popu lations. Ege stion i s food that is not ass imi lated by the gu t a nd whi ch is elimina ted as feces (Pe nna k 1964 ). By co n t r ast , excretion is a waste product formed from assimilated f ood a nd gener a l ly i s e l imi nated in a d i s s o l ved form. 204 . Energy f low refe r s t o the assimilat ion of a population and i s de signated a s t he s um of produ cti on (P) and r espiration (R) , i .e ., A = P + R (Sus hchenya 1969 ; Odum 1971) . The e fficiency o f energy flow in a popul ation, p ~ R , may be approx ima tely e qua l t o the a ssimi l a tion efficiency of an i nd i vidua l in t hat population (Sushchenya 1969) . However , since A/G o f t en de pends on age (Sch indler 1968, Waldbaue r 1968 , Winberg et al . -
Meiobenthos of the Discovery Bay Lagoon, Jamaica, with an Emphasis on Nematodes
Meiobenthos of the discovery Bay Lagoon, Jamaica, with an emphasis on nematodes. Edwards, Cassian The copyright of this thesis rests with the author and no quotation from it or information derived from it may be published without the prior written consent of the author For additional information about this publication click this link. https://qmro.qmul.ac.uk/jspui/handle/123456789/522 Information about this research object was correct at the time of download; we occasionally make corrections to records, please therefore check the published record when citing. For more information contact [email protected] UNIVERSITY OF LONDON SCHOOL OF BIOLOGICAL AND CHEMICAL SCIENCES Meiobenthos of The Discovery Bay Lagoon, Jamaica, with an emphasis on nematodes. Cassian Edwards A thesis submitted for the degree of Doctor of Philosophy March 2009 1 ABSTRACT Sediment granulometry, microphytobenthos and meiobenthos were investigated at five habitats (white and grey sands, backreef border, shallow and deep thalassinid ghost shrimp mounds) within the western lagoon at Discovery Bay, Jamaica. Habitats were ordinated into discrete stations based on sediment granulometry. Microphytobenthic chlorophyll-a ranged between 9.5- and 151.7 mg m -2 and was consistently highest at the grey sand habitat over three sampling occasions, but did not differ between the remaining habitats. It is suggested that the high microphytobenthic biomass in grey sands was related to upwelling of nutrient rich water from the nearby main bay, and the release and excretion of nutrients from sediments and burrowing heart urchins, respectively. Meiofauna abundance ranged from 284- to 5344 individuals 10 cm -2 and showed spatial differences depending on taxon. -
The Sea Stars (Echinodermata: Asteroidea): Their Biology, Ecology, Evolution and Utilization OPEN ACCESS
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/328063815 The Sea Stars (Echinodermata: Asteroidea): Their Biology, Ecology, Evolution and Utilization OPEN ACCESS Article · January 2018 CITATIONS READS 0 6 5 authors, including: Ferdinard Olisa Megwalu World Fisheries University @Pukyong National University (wfu.pknu.ackr) 3 PUBLICATIONS 0 CITATIONS SEE PROFILE Some of the authors of this publication are also working on these related projects: Population Dynamics. View project All content following this page was uploaded by Ferdinard Olisa Megwalu on 04 October 2018. The user has requested enhancement of the downloaded file. Review Article Published: 17 Sep, 2018 SF Journal of Biotechnology and Biomedical Engineering The Sea Stars (Echinodermata: Asteroidea): Their Biology, Ecology, Evolution and Utilization Rahman MA1*, Molla MHR1, Megwalu FO1, Asare OE1, Tchoundi A1, Shaikh MM1 and Jahan B2 1World Fisheries University Pilot Programme, Pukyong National University (PKNU), Nam-gu, Busan, Korea 2Biotechnology and Genetic Engineering Discipline, Khulna University, Khulna, Bangladesh Abstract The Sea stars (Asteroidea: Echinodermata) are comprising of a large and diverse groups of sessile marine invertebrates having seven extant orders such as Brisingida, Forcipulatida, Notomyotida, Paxillosida, Spinulosida, Valvatida and Velatida and two extinct one such as Calliasterellidae and Trichasteropsida. Around 1,500 living species of starfish occur on the seabed in all the world's oceans, from the tropics to subzero polar waters. They are found from the intertidal zone down to abyssal depths, 6,000m below the surface. Starfish typically have a central disc and five arms, though some species have a larger number of arms. The aboral or upper surface may be smooth, granular or spiny, and is covered with overlapping plates. -
Understanding Bioluminescence in Dinoflagellates—How Far Have We Come?
Microorganisms 2013, 1, 3-25; doi:10.3390/microorganisms1010003 OPEN ACCESS microorganisms ISSN 2076-2607 www.mdpi.com/journal/microorganisms Review Understanding Bioluminescence in Dinoflagellates—How Far Have We Come? Martha Valiadi 1,* and Debora Iglesias-Rodriguez 2 1 Department of Evolutionary Ecology, Max Planck Institute for Evolutionary Biology, August-Thienemann-Strasse, Plӧn 24306, Germany 2 Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, CA 93106, USA; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected] or [email protected]; Tel.: +49-4522-763277; Fax: +49-4522-763310. Received: 3 May 2013; in revised form: 20 August 2013 / Accepted: 24 August 2013 / Published: 5 September 2013 Abstract: Some dinoflagellates possess the remarkable genetic, biochemical, and cellular machinery to produce bioluminescence. Bioluminescent species appear to be ubiquitous in surface waters globally and include numerous cosmopolitan and harmful taxa. Nevertheless, bioluminescence remains an enigmatic topic in biology, particularly with regard to the organisms’ lifestyle. In this paper, we review the literature on the cellular mechanisms, molecular evolution, diversity, and ecology of bioluminescence in dinoflagellates, highlighting significant discoveries of the last quarter of a century. We identify significant gaps in our knowledge and conflicting information and propose some important research questions -
Author's Accepted Manuscript
Author’s Accepted Manuscript This is the accepted version of the following article: Rakka, M., Bilan, M., Godinho, A., Movilla, J., Orejas, C., & Carreiro-Silva, M. (2019). First description of polyp bailout in cold-water octocorals under aquaria maintenance. Coral Reefs, 38(1), 15-20, which has been published in final form at https://doi.org/10.1007/s00338-018-01760- x. This article may be used for non-commercial purposes in accordance with Springer Terms and Conditions for Use of Self-Archived Versions 1 First description of polyp bail-out in cold-water octocorals under aquaria maintenance Maria Rakka1,2,3, Meri Bilan1,2,3, Antonio Godinho1,2,3,Juancho Movilla4,5, Covadonga Orejas4, Marina Carreiro-Silva1,2,3 1 MARE – Marine and Environmental Sciences Centre and Centre of the Institute of Marine Research 2 IMAR – University of the Azores, Rua Frederico Machado 4, 9901-862 Horta, Portugal 3 OKEANOS Research Unit, Faculty of Science and Technology, University of the Azores, 9901-862, Horta, Portugal 4 Instituto Español de Oceanografía, Centro Oceanográfico de Baleares, Moll de Ponent s/n, 07015 Palma, Spain 5 Instituto de Ciencias del Mar (ICM-CSIC). Passeig Maritim de la Barceloneta 37-49, 08003 Barcelona, Spain Corresponding author: Maria Rakka, [email protected], +351915407062 2 Abstract Cnidarians, characterized by high levels of plasticity, exhibit remarkable mechanisms to withstand or escape unfavourable conditions including reverse development which describes processes of transformation of adult stages into early developmental stages with higher mobility. Polyp bail-out is a stress-escape response common among scleractinian species, consisting of massive detachment of live polyps and subsequent death of the mother colony. -
I. Introduction
Bathymetric distribution of the species .... 210 2. Penetration of species into the Bathymetric zonation of the deep sea ...... 210 Mediterranean deep sea ............. 235 Bathymetric distribution and taxonomic 3. Comparison with other groups ....... 235 relationship .......................... 214 Sediments and nutrient conditions ........ 235 Number of species and individuals in Hydrostatic pressure ..................... 237 relation to depth ...................... 217 Currents ............................... 238 Topography ............................ 238 E. Geographic distribution .................. 219 Conclusion ............................. 239 The exploration of the different geographic regions ............................... 219 G. The hadal fauna ........................ 239 The bathyal fauna ...................... 220 The hadal environment .................. 239 The abyssal fauna ....................... 221 General features of the hadal fauna ....... 240 1. World-wide distributions ............ 223 2. The Antarctic Ocean ................ 224 H. Evolutionary aspects .................... 243 3. The North Atlantic ................. 225 Evolution within the deep sea versus 4. The South Atlantic ................. 227 immigration from shallower depths .... 243 5. The Indian Ocean .................. 22; Geographic variation .................... 244 6. The Indonesian seas ................ 228 1. Clines ............................. 245 7. The Pacific Ocean .................. 231 2. Local variation ..................... 245 8. The Arctic -
Ecological Characterization of Bioluminescence in Mangrove Lagoon, Salt River Bay, St. Croix, USVI
Ecological Characterization of Bioluminescence in Mangrove Lagoon, Salt River Bay, St. Croix, USVI James L. Pinckney (PI)* Dianne I. Greenfield Claudia Benitez-Nelson Richard Long Michelle Zimberlin University of South Carolina Chad S. Lane Paula Reidhaar Carmelo Tomas University of North Carolina - Wilmington Bernard Castillo Kynoch Reale-Munroe Marcia Taylor University of the Virgin Islands David Goldstein Zandy Hillis-Starr National Park Service, Salt River Bay NHP & EP 01 January 2013 – 31 December 2013 Duration: 1 year * Contact Information Marine Science Program and Department of Biological Sciences University of South Carolina Columbia, SC 29208 (803) 777-7133 phone (803) 777-4002 fax [email protected] email 1 TABLE OF CONTENTS INTRODUCTION ............................................................................................................................................... 4 BACKGROUND: BIOLUMINESCENT DINOFLAGELLATES IN CARIBBEAN WATERS ............................................... 9 PROJECT OBJECTIVES ..................................................................................................................................... 19 OBJECTIVE I. CONFIRM THE IDENTIY OF THE BIOLUMINESCENT DINOFLAGELLATE(S) AND DOMINANT PHYTOPLANKTON SPECIES IN MANGROVE LAGOON ........................................................................ 22 OBJECTIVE II. COLLECT MEASUREMENTS OF BASIC WATER QUALITY PARAMETERS (E.G., TEMPERATURE, SALINITY, DISSOLVED O2, TURBIDITY, PH, IRRADIANCE, DISSOLVED NUTRIENTS) FOR CORRELATION WITH PHYTOPLANKTON -
Bioluminescence and Fluorescence of Three Sea Pens in the North-West
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.08.416396; this version posted December 9, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Bioluminescence and fluorescence of three sea pens in the north-west Mediterranean sea Warren R Francis* 1, Ana¨ısSire de Vilar 1 1: Dept of Biology, University of Southern Denmark, Odense, Denmark Corresponding author: [email protected] Abstract Bioluminescence of Mediterranean sea pens has been known for a long time, but basic parameters such as the emission spectra are unknown. Here we examined bioluminescence in three species of Pennatulacea, Pennatula rubra, Pteroeides griseum, and Veretillum cynomorium. Following dark adaptation, all three species could easily be stimulated to produce green light. All species were also fluorescent, with bioluminescence being produced at the same sites as the fluorescence. The shape of the fluorescence spectra indicates the presence of a GFP closely associated with light production, as seen in Renilla. Our videos show that light proceeds as waves along the colony from the point of stimulation for all three species, as observed in many other octocorals. Features of their bioluminescence are strongly suggestive of a \burglar alarm" function. Introduction Bioluminescence is the production of light by living organisms, and is extremely common in the marine environment [Haddock et al., 2010, Martini et al., 2019]. Within the phylum Cnidaria, biolumiescence is widely observed among the Medusazoa (true jellyfish and kin), but also among the Octocorallia, and especially the Pennatulacea (sea pens).