Redefining Microascus, Scopulariopsis and Allied Genera
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EPPO Standards
EPPO Standards DIAGNOSTIC PROTOCOLS FOR REGULATED PESTS CERATOCYSTIS FAGACEARUM PM 7/1(1) English oepp eppo European and Mediterranean Plant Protection Organization 1, rue Le Nôtre, 75016 Paris, France APPROVAL EPPO Standards are approved by EPPO Council. The date of approval appears in each individual standard. In the terms of Article II of the IPPC, EPPO Standards are Regional Standards for the members of EPPO. REVIEW EPPO Standards are subject to periodic review and amendment. The next review date for this EPPO Standard is decided by the EPPO Working Party on Phytosanitary Regulations. AMENDMENT RECORD Amendments will be issued as necessary, numbered and dated. The dates of amendment appear in each individual standard (as appropriate). DISTRIBUTION EPPO Standards are distributed by the EPPO Secretariat to all EPPO member governments. Copies are available to any interested person under particular conditions upon request to the EPPO Secretariat. SCOPE EPPO Diagnostic Protocols for Regulated Pests are intended to be used by National Plant Protection Organizations, in their capacity as bodies responsible for the application of phytosanitary measures, to detect and identify the regulated pests of the EPPO and/or European Union lists. In 1998, EPPO started a new programme to prepare diagnostic protocols for the regulated pests of the EPPO region (including the EU). The work is conducted by the EPPO Panel on Diagnostics and other specialist Panels. The objective of the programme is to develop an internationally agreed diagnostic protocol for each regulated pest. The protocols are based on the many years of experience of EPPO experts. The first drafts are prepared by an assigned expert author(s). -
Bretziella, a New Genus to Accommodate the Oak Wilt Fungus
A peer-reviewed open-access journal MycoKeys 27: 1–19 (2017)Bretziella, a new genus to accommodate the oak wilt fungus... 1 doi: 10.3897/mycokeys.27.20657 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Bretziella, a new genus to accommodate the oak wilt fungus, Ceratocystis fagacearum (Microascales, Ascomycota) Z. Wilhelm de Beer1, Seonju Marincowitz1, Tuan A. Duong2, Michael J. Wingfield1 1 Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa 2 Department of Genetics, Forestry and Agricultural Bio- technology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa Corresponding author: Z. Wilhelm de Beer ([email protected]) Academic editor: T. Lumbsch | Received 28 August 2017 | Accepted 6 October 2017 | Published 20 October 2017 Citation: de Beer ZW, Marincowitz S, Duong TA, Wingfield MJ (2017) Bretziella, a new genus to accommodate the oak wilt fungus, Ceratocystis fagacearum (Microascales, Ascomycota). MycoKeys 27: 1–19. https://doi.org/10.3897/ mycokeys.27.20657 Abstract Recent reclassification of the Ceratocystidaceae (Microascales) based on multi-gene phylogenetic infer- ence has shown that the oak wilt fungus Ceratocystis fagacearum does not reside in any of the four genera in which it has previously been treated. In this study, we resolve typification problems for the fungus, confirm the synonymy ofChalara quercina (the first name applied to the fungus) andEndoconidiophora fagacearum (the name applied when the sexual state was discovered). Furthermore, the generic place- ment of the species was determined based on DNA sequences from authenticated isolates. The original specimens studied in both protologues and living isolates from the same host trees and geographical area were examined and shown to represent the same species. -
Development and Evaluation of Rrna Targeted in Situ Probes and Phylogenetic Relationships of Freshwater Fungi
Development and evaluation of rRNA targeted in situ probes and phylogenetic relationships of freshwater fungi vorgelegt von Diplom-Biologin Christiane Baschien aus Berlin Von der Fakultät III - Prozesswissenschaften der Technischen Universität Berlin zur Erlangung des akademischen Grades Doktorin der Naturwissenschaften - Dr. rer. nat. - genehmigte Dissertation Promotionsausschuss: Vorsitzender: Prof. Dr. sc. techn. Lutz-Günter Fleischer Berichter: Prof. Dr. rer. nat. Ulrich Szewzyk Berichter: Prof. Dr. rer. nat. Felix Bärlocher Berichter: Dr. habil. Werner Manz Tag der wissenschaftlichen Aussprache: 19.05.2003 Berlin 2003 D83 Table of contents INTRODUCTION ..................................................................................................................................... 1 MATERIAL AND METHODS .................................................................................................................. 8 1. Used organisms ............................................................................................................................. 8 2. Media, culture conditions, maintenance of cultures and harvest procedure.................................. 9 2.1. Culture media........................................................................................................................... 9 2.2. Culture conditions .................................................................................................................. 10 2.3. Maintenance of cultures.........................................................................................................10 -
Entomopathogenic Fungi and Bacteria in a Veterinary Perspective
biology Review Entomopathogenic Fungi and Bacteria in a Veterinary Perspective Valentina Virginia Ebani 1,2,* and Francesca Mancianti 1,2 1 Department of Veterinary Sciences, University of Pisa, viale delle Piagge 2, 56124 Pisa, Italy; [email protected] 2 Interdepartmental Research Center “Nutraceuticals and Food for Health”, University of Pisa, via del Borghetto 80, 56124 Pisa, Italy * Correspondence: [email protected]; Tel.: +39-050-221-6968 Simple Summary: Several fungal species are well suited to control arthropods, being able to cause epizootic infection among them and most of them infect their host by direct penetration through the arthropod’s tegument. Most of organisms are related to the biological control of crop pests, but, more recently, have been applied to combat some livestock ectoparasites. Among the entomopathogenic bacteria, Bacillus thuringiensis, innocuous for humans, animals, and plants and isolated from different environments, showed the most relevant activity against arthropods. Its entomopathogenic property is related to the production of highly biodegradable proteins. Entomopathogenic fungi and bacteria are usually employed against agricultural pests, and some studies have focused on their use to control animal arthropods. However, risks of infections in animals and humans are possible; thus, further studies about their activity are necessary. Abstract: The present study aimed to review the papers dealing with the biological activity of fungi and bacteria against some mites and ticks of veterinary interest. In particular, the attention was turned to the research regarding acarid species, Dermanyssus gallinae and Psoroptes sp., which are the cause of severe threat in farm animals and, regarding ticks, also pets. -
Fungal Planet Description Sheets: 716–784 By: P.W
Fungal Planet description sheets: 716–784 By: P.W. Crous, M.J. Wingfield, T.I. Burgess, G.E.St.J. Hardy, J. Gené, J. Guarro, I.G. Baseia, D. García, L.F.P. Gusmão, C.M. Souza-Motta, R. Thangavel, S. Adamčík, A. Barili, C.W. Barnes, J.D.P. Bezerra, J.J. Bordallo, J.F. Cano-Lira, R.J.V. de Oliveira, E. Ercole, V. Hubka, I. Iturrieta-González, A. Kubátová, M.P. Martín, P.-A. Moreau, A. Morte, M.E. Ordoñez, A. Rodríguez, A.M. Stchigel, A. Vizzini, J. Abdollahzadeh, V.P. Abreu, K. Adamčíková, G.M.R. Albuquerque, A.V. Alexandrova, E. Álvarez Duarte, C. Armstrong-Cho, S. Banniza, R.N. Barbosa, J.-M. Bellanger, J.L. Bezerra, T.S. Cabral, M. Caboň, E. Caicedo, T. Cantillo, A.J. Carnegie, L.T. Carmo, R.F. Castañeda-Ruiz, C.R. Clement, A. Čmoková, L.B. Conceição, R.H.S.F. Cruz, U. Damm, B.D.B. da Silva, G.A. da Silva, R.M.F. da Silva, A.L.C.M. de A. Santiago, L.F. de Oliveira, C.A.F. de Souza, F. Déniel, B. Dima, G. Dong, J. Edwards, C.R. Félix, J. Fournier, T.B. Gibertoni, K. Hosaka, T. Iturriaga, M. Jadan, J.-L. Jany, Ž. Jurjević, M. Kolařík, I. Kušan, M.F. Landell, T.R. Leite Cordeiro, D.X. Lima, M. Loizides, S. Luo, A.R. Machado, H. Madrid, O.M.C. Magalhães, P. Marinho, N. Matočec, A. Mešić, A.N. Miller, O.V. Morozova, R.P. Neves, K. Nonaka, A. Nováková, N.H. -
De Novo Assembly and Genome Analyses of the Marine-Derived
De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain LF580 Unravels Life-Style Traits and Anticancerous Scopularide Biosynthetic Gene Cluster Abhishek Kumar, Bernard Henrissat, Mikko Arvas, Muhammad Fahad Syed, Nils Thieme, J. Philipp Benz, Jens Laurids Sorensen, Eric Record, Stefanie Poeggeler, Frank Kempken To cite this version: Abhishek Kumar, Bernard Henrissat, Mikko Arvas, Muhammad Fahad Syed, Nils Thieme, et al.. De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain LF580 Unravels Life-Style Traits and Anticancerous Scopularide Biosynthetic Gene Cluster. PLoS ONE, Public Library of Science, 2015, 10 (10), 10.1371/journal.pone.0140398. hal-01439026 HAL Id: hal-01439026 https://hal.archives-ouvertes.fr/hal-01439026 Submitted on 17 Sep 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License RESEARCH ARTICLE De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain -
Ceratocystis Fimbriata Infecting Eucalyptus Grandis in Uruguay
CSIRO PUBLISHING www.publish.csiro.au/journals/app Australasian Plant Pathology, 2003, 32, 361–366 Ceratocystis fimbriata infecting Eucalyptus grandis in Uruguay I. BarnesA,D, J. RouxA, B. D. WingfieldB, M. O’NeillC and M. J. WingfieldA ADepartment of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa. BDepartment of Genetics, University of Pretoria, Pretoria, South Africa. CUruguaya S. A. Forestry Company, Rivera, Uruguay. DCorresponding author: [email protected] Abstract. Uruguay has a rapidly growing forestry industry consisting mainly of exotic Pinus and Eucalyptus spp. Recently, there have been reports of individual E. grandis trees wilting and dying rapidly in plantations. The aim of this investigation was to survey the dying E. grandis in the Rivera area of Uruguay and to determine the cause of the Eucalyptus wilt. Sap-staining symptoms were observed on recently pruned E. grandis. Discs of discoloured wood were cut from these pruned trees and from the stems of dying trees. These disks were stored in a moist environment to induce fungal sporulation. Ascomata, typical of a Ceratocystis sp., were found covering the edges of the wood where streaking symptoms occurred. Morphologically, the fungus resembles C. fimbriata. The internal transcribed spacer regions of the ribosomal RNA operon of the Ceratocystis sp. were amplified and sequenced. Sequence data confirmed placement of this fungus amongst other isolates of C. fimbriata. Furthermore, the sequence data showed that the Uruguay isolates are most closely related to those from diseased Eucalyptus spp. in Brazil, Congo and Uganda. C. fimbriata is a well-known pathogen of many woody plants and could constitute a serious threat to intensively managed E. -
Isolation of Scopulariopsis Brevicaulis from Wistar Rats
Etlik Vet Mikrobiyol Derg, 2020; 31 (2): 196-200 Case Report doi: https://doi.org/10.35864/evmd.768818 Olgu Sunumu Case report: Isolation of Scopulariopsis brevicaulis from Wistar Rats Özlem Şahan Yapıcıer1* , Mehmet Kaya2 , Zeki Erol3 , Dilek Öztürk4 1,2,4 Faculty of Veterinary Medicine, Mehmet Akif Ersoy University, Department of Microbiology, Burdur, TURKEY 3 Mehmet Akif Ersoy University, Experimental Animal Production and Experimental Research Center, Burdur, TURKEY Geliş Tarihi / Received: 13.07.2020, Kabul tarihi / Accepted: 07.12.2020 Abstract: Scopulariopsis brevicaulis is a saprophytic fungus that has wide geographic distribution. This study de- scribes a case of hair loss and skin lesions observed in male and female Wistar rats due to Scopulariopsis brevicaulis infection in Turkey. Skin scrapings and hair samples from three male and two female rats were provided by the Experimental Animal Production and Experimental Research Center of Mehmet Akif Ersoy University to the Faculty of Veterinary Medicine, Department of Microbiology Laboratory in Burdur for analysis in July 2019. Microbiological methods were used for species identification andScopulariopsis brevicaulis was isolated from all of the samples. The rats completely recovered without treatment and had no recurrence of clinical signs at one month post-sampling. This study is the first report ofS. brevicaulis causing an infection in Wistar rats in Turkey. Keywords: Laboratory animals, mycological examination, rats, saprophyte, Scopulariopsis sp Olgu sunumu: Wistar Ratlarından Scopulariopsis brevicularis izolasyonu Özet: Scopulariopsis brevicaulis, geniş coğrafi dağılımı olan saprofitik bir mantardır. Bu olgu, Türkiye’deki erkek ve dişi Wistar ratlarında Scopulariopsis brevicaulis infeksiyonuna bağlı olarak gözlenen tüy kaybı ve deri lezyonlarını tanımlamaktadır. -
Microascaceae)
PERSOONIA Published by the Rijksherbarium, Leiden Part. Volume 7, 3, 367-375 (1973) The genera Petriellidium and Pithoascus (Microascaceae) J.A. von Arx Centraalbureau The Netherlands voor Schimmelcultures, Baarn, the and the of Keys are given to genera of the Microascaceae to species Petriellidium and Pithoascus. In Petriellidium six species are accepted, P. desertorum, P. ellipsoideum, P. fusoideum, and P. africanum are described as new. In Pithoascus also six species are enumerated, P. platysporus and P. stoveri are the described as new, for Microascus exsertus Skou combination Pithoascus exsertus is proposed. Introduction The family Microascaceae, covering five genera of ascomycetes, has been treated by for Malloch (1970). Microascus, Petriella and Lophotrichus are accepted species with non-ostiolate classifiedin Kerniaand the ostiolateascomata; the counterparts are new Petriellidium. A further Pithoascus has been Arx genus genus proposed by von (1973) for some species hitherto classified in Microascus. The Microascaceae be the characteristics ofthe can easily recognized by ascospores, which are one-celled, smooth, relatively small, yellowish, straw coloured, reddish or dextrinoid when and with often indistinct copper coloured, young, an or inconspi- both ends. The formationof conidia is characteristic in of cuous germ pore at most the genera. Typical Microascus and Kernia species include a Scopulariopsis or War- have like conidial domyces conidialstate; all Petriella species a Graphium- state, and in ali Petriellidium and oftenalso conidial is species a Scedosporium- a Graphium- state present. No conidial states are known in Lophotrichus- and Pithoascus-species. The latter genus also be the slow of the colonies and can recognized by very growth by glabrous which be ostiolate non-ostiolate. -
A Higher-Level Phylogenetic Classification of the Fungi
mycological research 111 (2007) 509–547 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres A higher-level phylogenetic classification of the Fungi David S. HIBBETTa,*, Manfred BINDERa, Joseph F. BISCHOFFb, Meredith BLACKWELLc, Paul F. CANNONd, Ove E. ERIKSSONe, Sabine HUHNDORFf, Timothy JAMESg, Paul M. KIRKd, Robert LU¨ CKINGf, H. THORSTEN LUMBSCHf, Franc¸ois LUTZONIg, P. Brandon MATHENYa, David J. MCLAUGHLINh, Martha J. POWELLi, Scott REDHEAD j, Conrad L. SCHOCHk, Joseph W. SPATAFORAk, Joost A. STALPERSl, Rytas VILGALYSg, M. Catherine AIMEm, Andre´ APTROOTn, Robert BAUERo, Dominik BEGEROWp, Gerald L. BENNYq, Lisa A. CASTLEBURYm, Pedro W. CROUSl, Yu-Cheng DAIr, Walter GAMSl, David M. GEISERs, Gareth W. GRIFFITHt,Ce´cile GUEIDANg, David L. HAWKSWORTHu, Geir HESTMARKv, Kentaro HOSAKAw, Richard A. HUMBERx, Kevin D. HYDEy, Joseph E. IRONSIDEt, Urmas KO˜ LJALGz, Cletus P. KURTZMANaa, Karl-Henrik LARSSONab, Robert LICHTWARDTac, Joyce LONGCOREad, Jolanta MIA˛ DLIKOWSKAg, Andrew MILLERae, Jean-Marc MONCALVOaf, Sharon MOZLEY-STANDRIDGEag, Franz OBERWINKLERo, Erast PARMASTOah, Vale´rie REEBg, Jack D. ROGERSai, Claude ROUXaj, Leif RYVARDENak, Jose´ Paulo SAMPAIOal, Arthur SCHU¨ ßLERam, Junta SUGIYAMAan, R. Greg THORNao, Leif TIBELLap, Wendy A. UNTEREINERaq, Christopher WALKERar, Zheng WANGa, Alex WEIRas, Michael WEISSo, Merlin M. WHITEat, Katarina WINKAe, Yi-Jian YAOau, Ning ZHANGav aBiology Department, Clark University, Worcester, MA 01610, USA bNational Library of Medicine, National Center for Biotechnology Information, -
Composition and Diversity of Fungal Decomposers of Submerged Wood in Two Lakes in the Brazilian Amazon State of Para´
Hindawi International Journal of Microbiology Volume 2020, Article ID 6582514, 9 pages https://doi.org/10.1155/2020/6582514 Research Article Composition and Diversity of Fungal Decomposers of Submerged Wood in Two Lakes in the Brazilian Amazon State of Para´ Eveleise SamiraMartins Canto ,1,2 Ana Clau´ dia AlvesCortez,3 JosianeSantana Monteiro,4 Flavia Rodrigues Barbosa,5 Steven Zelski ,6 and João Vicente Braga de Souza3 1Programa de Po´s-Graduação da Rede de Biodiversidade e Biotecnologia da Amazoˆnia Legal-Bionorte, Manaus, Amazonas, Brazil 2Universidade Federal do Oeste do Para´, UFOPA, Santare´m, Para´, Brazil 3Instituto Nacional de Pesquisas da Amazoˆnia, INPA, Laborato´rio de Micologia, Manaus, Amazonas, Brazil 4Museu Paraense Emilio Goeldi-MPEG, Bele´m, Para´, Brazil 5Universidade Federal de Mato Grosso, UFMT, Sinop, Mato Grosso, Brazil 6Miami University, Department of Biological Sciences, Middletown, OH, USA Correspondence should be addressed to Eveleise Samira Martins Canto; [email protected] and Steven Zelski; [email protected] Received 25 August 2019; Revised 20 February 2020; Accepted 4 March 2020; Published 9 April 2020 Academic Editor: Giuseppe Comi Copyright © 2020 Eveleise Samira Martins Canto et al. *is is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Aquatic ecosystems in tropical forests have a high diversity of microorganisms, including fungi, which -
Collecting and Recording Fungi
British Mycological Society Recording Network Guidance Notes COLLECTING AND RECORDING FUNGI A revision of the Guide to Recording Fungi previously issued (1994) in the BMS Guides for the Amateur Mycologist series. Edited by Richard Iliffe June 2004 (updated August 2006) © British Mycological Society 2006 Table of contents Foreword 2 Introduction 3 Recording 4 Collecting fungi 4 Access to foray sites and the country code 5 Spore prints 6 Field books 7 Index cards 7 Computers 8 Foray Record Sheets 9 Literature for the identification of fungi 9 Help with identification 9 Drying specimens for a herbarium 10 Taxonomy and nomenclature 12 Recent changes in plant taxonomy 12 Recent changes in fungal taxonomy 13 Orders of fungi 14 Nomenclature 15 Synonymy 16 Morph 16 The spore stages of rust fungi 17 A brief history of fungus recording 19 The BMS Fungal Records Database (BMSFRD) 20 Field definitions 20 Entering records in BMSFRD format 22 Locality 22 Associated organism, substrate and ecosystem 22 Ecosystem descriptors 23 Recommended terms for the substrate field 23 Fungi on dung 24 Examples of database field entries 24 Doubtful identifications 25 MycoRec 25 Recording using other programs 25 Manuscript or typescript records 26 Sending records electronically 26 Saving and back-up 27 Viruses 28 Making data available - Intellectual property rights 28 APPENDICES 1 Other relevant publications 30 2 BMS foray record sheet 31 3 NCC ecosystem codes 32 4 Table of orders of fungi 34 5 Herbaria in UK and Europe 35 6 Help with identification 36 7 Useful contacts 39 8 List of Fungus Recording Groups 40 9 BMS Keys – list of contents 42 10 The BMS website 43 11 Copyright licence form 45 12 Guidelines for field mycologists: the practical interpretation of Section 21 of the Drugs Act 2005 46 1 Foreword In June 2000 the British Mycological Society Recording Network (BMSRN), as it is now known, held its Annual Group Leaders’ Meeting at Littledean, Gloucestershire.