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Article Evolutionary Dynamics of the OR Gene Repertoire in Teleost Fishes
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Article Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape Maxime Policarpo1, Katherine E Bemis2, James C Tyler3, Cushla J Metcalfe4, Patrick Laurenti5, Jean-Christophe Sandoz1, Sylvie Rétaux6 and Didier Casane*,1,7 1 Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France. 2 NOAA National Systematics Laboratory, National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A. 3Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, D.C., 20560, U.S.A. 4 Independent Researcher, PO Box 21, Nambour QLD 4560, Australia. 5 Université de Paris, Laboratoire Interdisciplinaire des Energies de Demain, Paris, France 6 Université Paris-Saclay, CNRS, Institut des Neurosciences Paris-Saclay, 91190, Gif-sur- Yvette, France. 7 Université de Paris, UFR Sciences du Vivant, F-75013 Paris, France. * Corresponding author: e-mail: [email protected]. !1 bioRxiv preprint doi: https://doi.org/10.1101/2021.03.09.434524; this version posted March 10, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Teleost fishes perceive their environment through a range of sensory modalities, among which olfaction often plays an important role. -
Landscape Analysis of Geographical Names in Hubei Province, China
Entropy 2014, 16, 6313-6337; doi:10.3390/e16126313 OPEN ACCESS entropy ISSN 1099-4300 www.mdpi.com/journal/entropy Article Landscape Analysis of Geographical Names in Hubei Province, China Xixi Chen 1, Tao Hu 1, Fu Ren 1,2,*, Deng Chen 1, Lan Li 1 and Nan Gao 1 1 School of Resource and Environment Science, Wuhan University, Luoyu Road 129, Wuhan 430079, China; E-Mails: [email protected] (X.C.); [email protected] (T.H.); [email protected] (D.C.); [email protected] (L.L.); [email protected] (N.G.) 2 Key Laboratory of Geographical Information System, Ministry of Education, Wuhan University, Luoyu Road 129, Wuhan 430079, China * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel: +86-27-87664557; Fax: +86-27-68778893. External Editor: Hwa-Lung Yu Received: 20 July 2014; in revised form: 31 October 2014 / Accepted: 26 November 2014 / Published: 1 December 2014 Abstract: Hubei Province is the hub of communications in central China, which directly determines its strategic position in the country’s development. Additionally, Hubei Province is well-known for its diverse landforms, including mountains, hills, mounds and plains. This area is called “The Province of Thousand Lakes” due to the abundance of water resources. Geographical names are exclusive names given to physical or anthropogenic geographic entities at specific spatial locations and are important signs by which humans understand natural and human activities. In this study, geographic information systems (GIS) technology is adopted to establish a geodatabase of geographical names with particular characteristics in Hubei Province and extract certain geomorphologic and environmental factors. -
Petrography and Origin of the Lower Ordovician Microbial Carbonates in the Songzi Area of Hubei Province, Middle Yangtze Region, China
Petroleum Science (2019) 16:956–971 https://doi.org/10.1007/s12182-019-0346-2 ORIGINAL PAPER Petrography and origin of the Lower Ordovician microbial carbonates in the Songzi Area of Hubei Province, middle Yangtze region, China Chuan‑Tao Xiao1 · Guo‑Qi Wei2 · Zhen‑Yu Song1 · Yun‑Peng Xiao1 · Wei Yang2 · Man Dong1 · Yun‑Fei Huang1 · Da Gao1 Received: 15 May 2018 / Published online: 16 August 2019 © The Author(s) 2019 Abstract This study is the frst systematic assessment of the Lower Ordovician microbial carbonates in Songzi, Hubei Province, China. This paper divides the microbial carbonates into two types according to growth patterns, namely nongranular and granular. The nongranular types include stromatolites, thrombolites, dendrolites, leiolites and laminites; the granular types are mainly oncolites and may include a small amount of microbiogenic oolite. According to their geometric features, the stromatolites can be divided into four types: stratiform, wavy, columnar and domal. Additionally, dipyramidal columnar stromatolites are identifed for the frst time and represent a new type of columnar stromatolite. The thrombolites are divided into three types: speckled, reticulated and banded. The grazing gastropod Ecculiomphalus and traces of bioturbation are observed in the speckled and reticulated thrombolites. This paper considers these two kinds of thrombolites to represent bioturbated thrombolites. These fndings not only fll gaps in the feld of domestic Ordovician bioturbated thrombolites but also provide new information for the study of thrombolites. Based on the analysis of the sedimentary characteristics of microbialites, the depositional environments of the various types of microbialites are described, and the distribution patterns of their depo‑ sitional environments are summarized. -
Network Group Psychological Education of College Students
Journal of Psychological Research | Volume 02 | Issue 03 | July 2020 Journal of Psychological Research https://ojs.bilpublishing.com/index.php/jpr REVIEW Network Group Psychological Education of College Students Zhenzi Han* Yonggang Li Babao Township Hospital, Songzi, Jingzhou, Hubei, 434000, China ARTICLE INFO ABSTRACT Article history Based on the perspective of psychology, this paper analyzes the causes and Received: 23 June 2020 characteristics of college students’ network mass incidents, explores the psychological factors of college students’ network mass incidents, and puts Accepted: 23 June 2020 forward the educational strategies to solve college students’ network mass Published Online: 30 July 2020 incidents: No.1. Adhere to humanism and take appeals as the center; Keywords: No.2. To improve the campus network public opinion guidance mechanism College students network group event psychological under the guidance of relevant social cognition theories; No.3. Strengthen communication and improve communication skills; analysis No.4. Promote information disclosure and transparency, and eliminate Education countermeasures uncertainty and ambiguity. 1. Foreword behavior, network group events is formed under the background of a certain social network community is a n recent years, with the frequent occurrence of mass social phenomenon and social issues of mutual interest incidents and related reports in various parts of China, focus in the discussion, through the network publishing, IPeople pay more and more attention to network group disseminating information and manufacturing network events, With the popularization and application of the net- public opinion, make the development of social events work, the network mass incidents of college students have conform to the collective behavior of his desire. -
One-Dimensional Steady Flow-Sediment Mathematic Models Helius and Their Application in the Three Gorges Project
US-CHINA WORKSHOP ON ADVANCED COMPUTATIONAL MODELLING IN HYDROSCIENCE & ENGINEERING September 19-21, Oxford, Mississippi, USA ONE-DIMENSIONAL STEADY FLOW-SEDIMENT MATHEMATIC MODELS HELIUS AND THEIR APPLICATION IN THE THREE GORGES PROJECT Yue Huang1 and Yuling Huang2 ABSTRACT In order to investigate the sediment problem of the Three Gorges Project (TGP), two 1-D steady flow-sediment mathematic models (i.e., HELIU-1 and HELIU-2) are developed gradually by Changjiang River Scientific Research Institute (CRSRI). Through calculation and verification for in situ measured data of large and medium scale reservoirs and channel reaches downstream of the dams in the Changjiang River Basin, it is found that they can give reasonable results to simulate reservoirs sedimentation and the downstream channel reaches’ deformation due to scour in long time period and long distance. Especially, after completion of TGP the models are also used to predict reservoir sedimentation in the TGP Reservoir (780 km long) and the channel reach (over 1100 km long) downstream of the TGP Dam. The calculated results have been referred by the technical design department of TGP. 1. INTRODUCTION At the beginning of the 1970s, a 1-D steady flow-sediment mathematic model HELIU-1 was developed for studying the sediment problem of the Three Gorges Project (TGP). This model was mainly used to study the scour and deposition of suspended sediment. It simulate reservoir sedimentation well, but it falls short of modeling the scour of river channel. Therefore, the model HELIU-2 was developed in the early 1990s. For HELIU-2, technical problems such as exchange of bed sediment and suspended sediment, river bed deformation and bed sediment composition have been taken into account. -
Microsatellite DNA Markers and Their Correlation with Growth Traits in Mandarin Fish (Siniperca Chuatsi)
Microsatellite DNA markers and their correlation with growth traits in mandarin fish (Siniperca chuatsi) L.F. Sun*, J. Li*, X.F. Liang, T.L. Yi, L. Fang, J. Sun, Y.H. He, X.N. Luo, Y.Q. Dou and M. Yang Key Lab of Freshwater Animal Breeding, College of Fisheries, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China *These authors contributed equally to this study. Corresponding author: X.F. Liang E-mail: [email protected] Genet. Mol. Res. 14 (4): 19128-19135 (2015) Received August 24, 2015 Accepted October 30, 2015 Published December 29, 2015 DOI http://dx.doi.org/10.4238/2015.December.29.22 ABSTRACT. The mandarin fish (Siniperca chuatsi) is a traditionally cultured freshwater fish with high commercial value in China. To facilitate marker- assisted selection in genetic improvement of this species, 120 microsatellite markers from the literature were characterized in the 25 largest and 25 smallest individuals. Eighteen polymorphic loci were then used to genotype 200 individuals, and the associations between their genotypes and growth traits were examined. We found that eight genotypes of six loci (AP 37-06, AP 37-11, AP 37-16, AP 37-48, AP 38-32, and AP 39-05) were positively correlated with growth traits (body weight, length, and height) in the mandarin fish population. The average observed and expected heterozygosities were 0.68 and 0.59, respectively, and the average PIC value was 0.50, indicating a population with high genetic diversity. Therefore, these markers could be useful for assisted selection in genetic breeding of this species and its related species. -
Amur Fish: Wealth and Crisis
Amur Fish: Wealth and Crisis ББК 28.693.32 Н 74 Amur Fish: Wealth and Crisis ISBN 5-98137-006-8 Authors: German Novomodny, Petr Sharov, Sergei Zolotukhin Translators: Sibyl Diver, Petr Sharov Editors: Xanthippe Augerot, Dave Martin, Petr Sharov Maps: Petr Sharov Photographs: German Novomodny, Sergei Zolotukhin Cover photographs: Petr Sharov, Igor Uchuev Design: Aleksey Ognev, Vladislav Sereda Reviewed by: Nikolai Romanov, Anatoly Semenchenko Published in 2004 by WWF RFE, Vladivostok, Russia Printed by: Publishing house Apelsin Co. Ltd. Any full or partial reproduction of this publication must include the title and give credit to the above-mentioned publisher as the copyright holder. No photographs from this publication may be reproduced without prior authorization from WWF Russia or authors of the photographs. © WWF, 2004 All rights reserved Distributed for free, no selling allowed Contents Introduction....................................................................................................................................... 5 Amur Fish Diversity and Research History ............................................................................. 6 Species Listed In Red Data Book of Russia ......................................................................... 13 Yellowcheek ................................................................................................................................... 13 Black Carp (Amur) ...................................................................................................................... -
Identification, Expression, and Functions of the Somatostatin Gene
G C A T T A C G G C A T genes Article Identification, Expression, and Functions of the Somatostatin Gene Family in Spotted Scat (Scatophagus argus) 1,2, 1,2,3, 1,2 1,2,3 Peizhe Feng y , Changxu Tian y , Xinghua Lin , Dongneng Jiang , Hongjuan Shi 1,2,3, Huapu Chen 1,2,3, Siping Deng 1,2,3, Chunhua Zhu 1,2,3 and Guangli Li 1,2,3,* 1 Fisheries College, Guangdong Ocean University, Zhanjiang 524088, China; [email protected] (P.F.); [email protected] (C.T.); [email protected] (X.L.); [email protected] (D.J.); [email protected] (H.S.); [email protected] (H.C.); [email protected] (S.D.); [email protected] (C.Z.) 2 Guangdong Research Center on Reproductive Control and Breeding Technology of Indigenous Valuable Fish Species, Zhanjiang 524088, China 3 Marine Ecology and Aquaculture Environment of Zhanjiang, Zhanjiang 524088, China * Correspondence: [email protected]; Tel.: +86-75-92-383-124; Fax: +86-75-92-382-459 These authors contributed equally to this work. y Received: 28 October 2019; Accepted: 7 February 2020; Published: 12 February 2020 Abstract: Somatostatins (SSTs) are a family of proteins consisting of structurally diverse polypeptides that play important roles in the growth regulation in vertebrates. In the present study, four somatostatin genes (SST1, SST3, SST5, and SST6) were identified and characterized in the spotted scat (Scatophagus argus). The open reading frames (ORFs) of SST1, SST3, SST5, and SST6 cDNA consist of 372, 384, 321, and 333 bp, respectively, and encode proteins of 123, 127, 106, and 110 amino acids, respectively. -
Financial Performance, Pollution Measures, and the Propensity To
Governing the Post-Socialist Transitional Commons: A Case from Rural China Shitong Qiao ABSTRACT When the collective declines, who manages the collective-owned land? When the socialist state fails, who possesses the state-owned river? This Article concerns the governance of land and natural resources that are still owned by collectives or the state in rural China. No effective community governance has evolved in rural China to fill the authority vacuum left by the dissolution of the people’s commune system. As a result, such land and natural resources have become real commons. In describing these I use the term “transitional commons” to indicate both the crucial influence of the transitional political legal environment in their emergence and evolution and their inherently transitional character. Transitional commons are often in crisis. The tragedy of the commons occurs when the cost of exclusive use is too high. When the benefit of exclusive use exceeds the cost, competing property claims arise over the J.S.D. Candidate, Yale Law School; Visiting Faculty and Director of Advanced Legal Studies, Peking University School of Transnational Law (2011–12 academic year). E- mail: [email protected]. The author wishes to express particular thanks to Professor Robert Ellickson, whose scholarship inspired this Article and whose diligent supervision improved it immensely, and to Professor Susan Rose-Ackerman, whose many suggestions were extremely on-point. In addition, discussions with Professor Paul Gewirtz, Noah Messing, Tian Lei, Wang Zhiqiang, Mickey Hyman, Noelle Lyle, and Liu Xiaotang contributed much to the development of this Article. Carol Pang, Xuan Gui, and Thomas Huang helped edit the language of earlier versions of this Article. -
Perspectives on Culture-Based Fisheries Developments in Asia
Culture-based fi sheries in lakes of the Yangtze River basin, China, with special reference to stocking of mandarin fi sh and Chinese mitten crab Qidong Wang1,2,3, Jiashou Liu1,3*, Zhongjie Li1,3 and Tanglin Zhang1,3 1. State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, 7 South Donghu Road, Wuhan 430072, Hubei, P.R. China. 2. University of the Chinese Academy of Sciences, Beijing 100049, P. R. China. 3. National Research Center for Freshwater Fisheries Engineering, Wuhan 430072, Hubei, P. R. China. * Corresponding author. Email: [email protected] Abstract: Lakes amount to 15% of the total freshwater surface area in China and are important for land-based fi sheries. More than 10 species are stocked into lakes to increase production and/or improve water quality. The most common species stocked are the Chinese major carps, i.e. silver carp, bighead carp, grass carp and black carp. In recent years, increasing amount of high valued species such as mandarin fi sh, mitten crab, yellow catfi sh and culters were stocked. However, the stocking of mandarin fi sh and mitten crab perhaps are the most successful because stock enhancement of these two species has been systematically conducted. In this paper, the culture-based fi sheries in lakes are presented, with special reference to mandarin fi sh and mitten crab stocking in lakes in China. The stocking rate of mandarin fi sh is determined by food consumption rates, which are mainly related to water temperature and fi sh size, and prey fi sh productivity. -
Findings of Middle Permian Radiolarian and Conodont Fossils from the Gufeng Formation of the Zigui Area, Hubei Province, China
Journal of Geosciences, Osaka City University Vol. 51, Aut. 2, p. 9-19, 11arch, 2008 Findings of Middle Permian radiolarian and conodont fossils from the Gufeng Formation of the Zigui area, Hubei Province, China 1 2 3 KUWAHARA Kiyoko1, YAO Akira , YAO Jianxin , FENG Shaonan , JI Zhansheng2 and YAO Huazhou3 I Department of Geosciences, Graduate School of Science, Osaka City University, Sumiyoshi-ku, Osaka 558-8585, Japan. 2 Institute of Geology, Chinese Academy of Geological Science, Beijing 100037, P. R. China 3 Yichang Institute of Geology and Mineral Resources, Ministry of Land and Resources, Yichang 443003, Hubei, P. R. China Abstract Middle Permian radiolarian and conodont fossils were found from the siliceous rocks of the Gufeng Formation in the Zigui area, the western part of Hubei Province, China. Radiolarians Pseudoalbaillella fusiformis and Follicucullus monacanthus were discovered from the Zhengjiawan and the Xiakou sections, respectively, and conodont Jinogondolella cf. postserrata was encountered from the Hongweiqiao section. The radiolarian-bearing strata of the Gufeng Formation in the Zhengjiawan section are correlated to the Pseudoalbaillella fusiformis-Pseudoalbaillella longtanensis Zone of Wang and Qi (1995), and that in the Xiakou section is correlated to the Follicucullus monacanthus Zone, respectively. Jinogondolella cf. postserrata from the Hongweiqiao section may indicate Capitanian in age. The Gufeng Formation of the Zigui area is correlated with the same formation of the Songzi-Wufeng area in Hubei Province and also in Anhui and Sichuan provinces on the basis of the radiolarian biostratigraphy. The onset of deposition of the Gufeng Formation coincides with the Pseudoalbaillella fusifonnis-Pseudoalbaillella longtanensis Zone at most sections in the Hubei, Anhui, and Sichuan provinces, while the end of the deposition differs in radiolarian zones from the Pseudoalbaillella fusiformis-Pseudoalbaillella longtanensis Zone to the Follicucullus scholasticus Zone in the Middle Permian. -
The Falsetto Tones of the Dialects in Hubei Province
The Falsetto Tones of the Dialects in Hubei Province C. Y. Wang 1, C. J. Tang 2 1 School of Humanities and Social Science, The Hong Kong University of Science and Technology, Hong Kong; School of Foreign Languages, Zhongnan University of Economics and Law, Wuhan, P. R. China. 2Foreign Language School, University of Electronic Science and Technology of China, Chengdu, P. R. China. [email protected], [email protected] In this research, falsetto tones are found in three places of Hubei Abstract Province 湖北省, i.e. Songzi 松滋, Jianli 监利 and Jingmen 荆 Falsetto phonation was applied to produce 上声 门 (hereafter the place may refer to its dialect). As shown in Fig. Shangsheng/Rising Tone in the early stage of Chinese tonal 1, they were marked in the circles on a map of Report on a development (ca. 400-700 AD) and this phonation type is still in Survey of the Dialects of Hupeh [1] which was based on the use in the tonal systems of several major Chinese dialect-groups fieldwork guided by Chao Yuen-Ren in 1930s. now. In Hubei 湖北 province, falsetto tones are found in three cities, Songzi 松滋, Jingmen 荆门 and Jianli 监利. In the tonal systems of these three dialects, the tone values show some noteworthy correspondences. In order to present the contemporary state of the falsetto tones and explore the tonal evolution through the synchronic field data, we conducted this research and chose Songzi as our starting point. Based on Evolutionary Phonology and the Multi-Register and Four-Level Tonal Model, three geographically connected and phonologically related dialects are found in Songzi: Weishui Type 洈水式 in the south, Nanhai Type 南海式 in the middle, and Songzihe Type 松滋河式 in the north.