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Insect Imaging at the ANKA Synchrotron Radiation Facility 147
Insect Imaging at the ANKA Synchrotron Radiation Facility 147 Entomologie heute 25 (2013): 147-160 Insect Imaging at the ANKA Synchrotron Radiation Facility Bildgebung von Insekten an der Synchrotronstrahlungsquelle ANKA THOMAS VAN DE KAMP, ALEXEY ERSHOV, TOMY DOS SANTOS ROLO, ALEXANDER RIEDEL & TILO BAUMBACH Summary: Internal structures of biological samples are often diffi cult to visualize by traditional morphological methods like light and electron microscopy. In insects, a robust cuticle often impedes examination. Three-dimensional visualization of anatomical details based on light microscopy photo graphs is particularly challenging, because the necessary creation of a series of “perfect” slices often proves to be impossible in the case of hard-shelled specimens. Synchrotron-based X-ray imaging provides a pool of techniques well-suited for morphological studies. As it allows examin- ing millimeter-sized non-translucent objects, it is particularly valuable for the multidimensional visualization of insects and became increasingly popular among entomologists. A synchrotron is a cyclic particle accelerator. In high vacuum electrons are accelerated up to nearly light speed, injected into a storage ring and deviated by bending magnets. When the electron beam changes its direction due to magnetic infl uence, electromagnetic radiation is transmitted tangentially, which is used in attached experimental stations (“beamlines”). Synchrotron radiation has a broad spectrum ranging from microwaves to hard X-rays, the latter being used for most synchrotron imaging techniques. The high intensity of these X-rays facilitates high special and temporal resolutions. An important method is synchrotron X-ray microtomography (SR-μCT). Here, a series of 2D X-ray projections of a rotating sample is used to calculate a 3D volume. -
The Mt Halimun-Salak Malaise Trap Project - Releasing the Most Species Rich DNA Barcode Library for Indonesia
Biodiversity Data Journal 6: e29927 doi: 10.3897/BDJ.6.e29927 Research Article The Mt Halimun-Salak Malaise Trap project - releasing the most species rich DNA Barcode library for Indonesia Bruno Cancian de Araujo‡, Stefan Schmidt‡‡, Olga Schmidt , Thomas von Rintelen§, Rosichon Ubaidillah|, Michael Balke ‡ ‡ SNSB-Zoologische Staatssammlung München, Munich, Germany § Museum für Naturkunde, Leibniz-Institut für Evolutions- und Biodiversitätsforschung, Berlin, Germany | Museum Zoologicum Bogoriense, Research Center for Biology, Indonesian Institute of Sciences, Cibinong, Indonesia Corresponding author: Bruno Cancian de Araujo ([email protected]) Academic editor: Gergin Blagoev Received: 20 Sep 2018 | Accepted: 28 Nov 2018 | Published: 19 Dec 2018 Citation: Cancian de Araujo B, Schmidt S, Schmidt O, von Rintelen T, Ubaidillah R, Balke M (2018) The Mt Halimun-Salak Malaise Trap project - releasing the most species rich DNA Barcode library for Indonesia. Biodiversity Data Journal 6: e29927. https://doi.org/10.3897/BDJ.6.e29927 Abstract The Indonesian archipelago features an extraordinarily rich biota. However, the actual taxonomic inventory of the archipelago remains highly incomplete and there is hardly any significant taxonomic activity that utilises recent technological advances. The IndoBioSys project was established as a biodiversity information system aiming at, amongst other goals, creating inventories of the Indonesian entomofauna using DNA barcoding. Here, we release the first large scale assessment of the megadiverse insect groups that occur in the Mount Halimun-Salak National Park, one of the largest tropical rain-forest ecosystem in West Java, with a focus on Hymenoptera, Coleoptera, Diptera and Lepidoptera collected with Malaise traps. From September 2015 until April 2016, 34 Malaise traps were placed in different localities in the south-eastern part of the Halimun-Salak National Park. -
Article Soup to Tree: the Phylogeny of Beetles Inferred by Mitochondrial
Soup to Tree: The Phylogeny of Beetles Inferred by Mitochondrial Metagenomics of a Bornean Rainforest Sample Alex Crampton-Platt,*,1,2 Martijn J.T.N. Timmermans,y,1,3 Matthew L. Gimmel,4 Sujatha Narayanan Kutty,z,1 Timothy D. Cockerill,1,5 Chey Vun Khen,6 and Alfried P. Vogler1,3,* 1Department of Life Sciences, Natural History Museum, London, United Kingdom 2Department of Genetics, Evolution and Environment, Faculty of Life Sciences, University College London, London, United Kingdom 3Division of Biology, Imperial College London, Silwood Park Campus, Ascot, United Kingdom 4Department of Biology, Faculty of Education, Palacky University, Olomouc, Czech Republic 5Department of Zoology, University of Cambridge, Cambridge, United Kingdom 6Entomology Section, Forest Research Centre, Forestry Department, Sandakan, Sabah, Malaysia yPresent address: Department of Natural Sciences, Hendon Campus, Middlesex University, London, United Kingdom zPresent address: Department of Biological Sciences, National University of Singapore, Singapore. *Corresponding author: E-mail: [email protected]; [email protected]. Associate editor: Claudia Russo Abstract In spite of the growth of molecular ecology, systematics and next-generation sequencing, the discovery and analysis of diversity is not currently integrated with building the tree-of-life. Tropical arthropod ecologists are well placed to accelerate this process if all specimens obtained through mass-trapping, many of which will be new species, could be incorporated routinely into phylogeny reconstruction. Here we test a shotgun sequencing approach, whereby mitochon- drial genomes are assembled from complex ecological mixtures through mitochondrial metagenomics, and demonstrate how the approach overcomes many of the taxonomic impediments to the study of biodiversity. -
A Secret Secondary Defence of an Aposematic Insect Lu-Yi Wang1,*, Wen-San Huang2,*, Hsin-Chieh Tang3, Lung-Chun Huang3 and Chung-Ping Lin1,4,‡
© 2018. Published by The Company of Biologists Ltd | Journal of Experimental Biology (2018) 221, jeb172486. doi:10.1242/jeb.172486 RESEARCH ARTICLE Too hard to swallow: a secret secondary defence of an aposematic insect Lu-Yi Wang1,*, Wen-San Huang2,*, Hsin-Chieh Tang3, Lung-Chun Huang3 and Chung-Ping Lin1,4,‡ ABSTRACT uneatable by small insectivorous animals; some have a disgusting … Anti-predator strategies are significant components of adaptation in taste ; others have such a hard and stony covering that they …’ prey species. Aposematic prey are expected to possess effective cannot be crushed or digested; defences that have evolved simultaneously with their warning Alfred Russel Wallace, 1867 colours. This study tested the hypothesis of the defensive function and ecological significance of the hard body in aposematic Predation is one of the most visible selective forces driving the Pachyrhynchus weevils pioneered by Alfred Russel Wallace nearly ecology and evolution of organisms in nature (Abrams, 2000). 150 years ago. We used predation trials with Japalura tree lizards to Therefore, evolving effective anti-predator strategies is a significant assess the survivorship of ‘hard’ (mature) versus ‘soft’ (teneral) and component of adaptation for many prey species. Diverse defensive ‘clawed’ (intact) versus ‘clawless’ (surgically removed) weevils. The strategies have evolved in a range of specific stages in the ecological significance of the weevil’s hard body was evaluated by encounters between predators and preys (Stevens, 2013). These ‘ ’ assessing the hardness of the weevils, the local prey insects, and the anti-predator strategies can be classified as primary and ‘ ’ bite forces of the lizard populations. The existence of toxins or secondary defences, depending on the timing in which they are deterrents in the weevil was examined by gas chromatography-mass performed (Ruxton et al., 2004). -
BUKU SDA 2019 Fix Watermark.Pdf
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Small Genome Symbiont Underlies Cuticle Hardness in Beetles
Small genome symbiont underlies cuticle hardness PNAS PLUS in beetles Hisashi Anbutsua,b,1,2, Minoru Moriyamaa,1, Naruo Nikohc,1, Takahiro Hosokawaa,d, Ryo Futahashia, Masahiko Tanahashia, Xian-Ying Menga, Takashi Kuriwadae,f, Naoki Morig, Kenshiro Oshimah, Masahira Hattorih,i, Manabu Fujiej, Noriyuki Satohk, Taro Maedal, Shuji Shigenobul, Ryuichi Kogaa, and Takema Fukatsua,m,n,2 aBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukuba 305-8566, Japan; bComputational Bio Big-Data Open Innovation Laboratory, National Institute of Advanced Industrial Science and Technology, Tokyo 169-8555, Japan; cDepartment of Liberal Arts, The Open University of Japan, Chiba 261-8586, Japan; dFaculty of Science, Kyushu University, Fukuoka 819-0395, Japan; eNational Agriculture and Food Research Organization, Kyushu Okinawa Agricultural Research Center, Okinawa 901-0336, Japan; fFaculty of Education, Kagoshima University, Kagoshima 890-0065, Japan; gDivision of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan; hGraduate School of Frontier Sciences, University of Tokyo, Chiba 277-8561, Japan; iGraduate School of Advanced Science and Engineering, Waseda University, Tokyo 169-8555, Japan; jDNA Sequencing Section, Okinawa Institute of Science and Technology Graduate University, Okinawa 904-0495, Japan; kMarine Genomics Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa 904-0495, Japan; lNIBB Core Research Facilities, National Institute for Basic Biology, Okazaki 444-8585, Japan; mDepartment of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo 113-0033, Japan; and nGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan Edited by Nancy A. Moran, University of Texas at Austin, Austin, TX, and approved August 28, 2017 (received for review July 19, 2017) Beetles, representing the majority of the insect species diversity, are symbiont transmission over evolutionary time (4, 6, 7). -
En La Nomenclatura De Taxones Paleontológicos Y Zoológicos
Bol. R. Soc. Esp. Hist. Nat., 114, 2020: 177-209 Desenfado (e incluso humor) en la nomenclatura de taxones paleontológicos y zoológicos Casualness (and even humor) in the nomenclature of paleontological and zoological taxa Juan Carlos Gutiérrez-Marco Instituto de Geociencias (CSIC, UCM) y Área de Paleontología GEODESPAL, Facultad CC. Geológicas, José Antonio Novais 12, 28040 Madrid. [email protected] Recibido: 25 de mayo de 2020. Aceptado: 7 de agosto de 2020. Publicado electrónicamente: 9 de agosto de 2020. PALABRAS CLAVE: Nombres científicos, Nomenclatura binominal, CINZ, Taxonomía, Paleontología, Zoología. KEY WORDS: Scientific names, Binominal nomenclature, ICZN, Taxonomy, Paleontology, Zoology. RESUMEN Se presenta una recopilación de más de un millar de taxones de nivel género o especie, de los que 486 corresponden a fósiles y 595 a organismos actuales, que fueron nombrados a partir de personajes reales o imaginarios, objetos, compañías comerciales, juegos de palabras, divertimentos sonoros o expresiones con doble significado. Entre las personas distinguidas por estos taxones destacan notablemente los artistas (músicos, actores, escritores, pintores) y, en menor medida, políticos, grandes científicos o divulgadores, así como diversos activistas. De entre los personajes u obras de ficción resaltan los derivados de ciertas obras literarias, películas o series de televisión, además de variadas mitologías propias de las diversas culturas. Los taxones que conllevan una terminología erótica o sexual más o menos explícita, también ocupan un lugar destacado en estas listas. Obviamente, el conjunto de estas excentricidades nomenclaturales, muchas de las cuales bordean el buen gusto y puntualmente rebasan las recomendaciones éticas de los códigos internacionales de nomenclatura, representan una ínfima minoría entre los casi dos millones de especies descritas hasta ahora. -
Insects of Guam-I CURCULIONIDAE of Gual\1 73 This Report, Based On
Insects of Guam-I 73 CURCULIONIDAE OF GUAl\1 By ELWOOD C. ZIMMERMAN EN'l'OMOLOGIS'l', BERNICE P. BISHOP MUSEUM INTRODUCTION SCOPE This report, based on collections made by several entomologists on the island of Guam, includes all of the Curculionidae known to inhabit the island. These number 49 species, included in 34 genera, of which 33 species and 8 genera are described as new. One new cossonid is described from the Marquesas, and several new combinations and new generic and specific synonyms are made. A number of described species are for the first time recorded from Guam, and the known geographical distribution of · several genera is greatly enlarged. Two species are removed from the list, one because of an incorrect citation of locality, and one because of a misidentification. I have examined types of the previously described endemic species and rede scribed them. The holotypes and allotypes of the new species are in the type collection of Bernice P. Bishop Museum, unless otherwise indicated. The measurements of the lengths of all specimens exclude the head and rostrum; all measurements were made with the aid of an eyepiece micrometer. PREVIOUS w ORK The first authentic collection of Guam weevils was reported upon by Bahe man in "Eugenies Resa" in 1859. In that paper were described Trigonops sub fasciata (Boheman), Trigonops impura (Boheman), and M enectetorus setu losus (Boheman). Boheman (in Schoenherr's Gen. Spec. Cure., 1B43) described Trigonops insularis ("Celeuthetes"), but that insect is not Guaman. From 1859 until this writing there have been no data recorded concerning the endemic Curculionidae of Guam. -
Deciphering the Evolution of Birdwing Butterflies 150 Years After Alfred Russel Wallace Received: 02 April 2015 1 2 3 Accepted: 29 May 2015 Fabien L
www.nature.com/scientificreports OPEN Deciphering the evolution of birdwing butterflies 150 years after Alfred Russel Wallace Received: 02 April 2015 1 2 3 Accepted: 29 May 2015 Fabien L. Condamine , Emmanuel F. A. Toussaint , Anne-Laure Clamens , 3 1,† 3,† Published: 02 July 2015 Gwenaelle Genson , Felix A. H. Sperling & Gael J. Kergoat One hundred and fifty years after Alfred Wallace studied the geographical variation and species diversity of butterflies in the Indomalayan-Australasian Archipelago, the processes responsible for their biogeographical pattern remain equivocal. We analysed the macroevolutionary mechanisms accounting for the temporal and geographical diversification of the charismatic birdwing butterflies (Papilionidae), a major focus of Wallace’s pioneering work. Bayesian phylogenetics and dating analyses of the birdwings were conducted using mitochondrial and nuclear genes. The combination of maximum likelihood analyses to estimate biogeographical history and diversification rates reveals that diversity-dependence processes drove the radiation of birdwings, and that speciation was often associated with founder-events colonizing new islands, especially in Wallacea. Palaeo-environment diversification models also suggest that high extinction rates occurred during periods of elevated sea level and global warming. We demonstrated a pattern of spatio-temporal habitat dynamics that continuously created or erased habitats suitable for birdwing biodiversity. Since birdwings were extinction-prone during the Miocene (warmer temperatures and elevated sea levels), the cooling period after the mid-Miocene climatic optimum fostered birdwing diversification due to the release of extinction. This also suggests that current global changes may represent a serious conservation threat to this flagship group. “[…] for the purpose of investigating the phenomena of geographical distribution and of local or general variation, […] several groups differ greatly in their value and importance. -
Zootaxa, Annotated Checklist of Weevils from the Papuan Region
ZOOTAXA 1536 Annotated checklist of weevils from the Papuan region (Coleoptera, Curculionoidea) GREGORY P. SETLIFF Magnolia Press Auckland, New Zealand Zootaxa 1536 © 2007 Magnolia Press · 1 Gregory P. Setliff Annotated checklist of weevils from the Papuan region (Coleoptera, Curculionoidea) (Zootaxa 1536) 296 pp.; 30 cm. 30 July 2007 ISBN 978-1-86977-139-3 (paperback) ISBN 978-1-86977-140-9 (Online edition) FIRST PUBLISHED IN 2007 BY Magnolia Press P.O. Box 41-383 Auckland 1346 New Zealand e-mail: [email protected] http://www.mapress.com/zootaxa/ © 2007 Magnolia Press All rights reserved. No part of this publication may be reproduced, stored, transmitted or disseminated, in any form, or by any means, without prior written permission from the publisher, to whom all requests to reproduce copyright material should be directed in writing. This authorization does not extend to any other kind of copying, by any means, in any form, and for any purpose other than private research use. ISSN 1175-5326 (Print edition) ISSN 1175-5334 (Online edition) 2 · Zootaxa 1536 © 2007 Magnolia Press SETLIFF Zootaxa 1536: 1–296 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 · Magnolia Press ISSN 1175-5334 (online edition) Annotated checklist of weevils from the Papuan region (Coleoptera, Curculionoidea) GREGORY P. SETLIFF Department of Entomology, University of Minnesota, 219 Hodson, 1980 Folwell Avenue, St. Paul, Minnesota 55108 U.S.A. & The New Guinea Binatang Research Center, P. O. Box 604, Madang, Papua New Guinea. -
The Prevalence of Single-Specimen/Locality Species in Insect Taxonomy: an Empirical Analysis
diversity Article The Prevalence of Single-Specimen/Locality Species in Insect Taxonomy: An Empirical Analysis Jun Deng, Yanqing Guo, Zhentao Cheng, Congcong Lu and Xiaolei Huang * State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China * Correspondence: [email protected] Received: 18 June 2019; Accepted: 4 July 2019; Published: 6 July 2019 Abstract: Although about two million species have been named, our knowledge about the biodiversity of many taxonomic groups remains inadequate and incomplete. There has been increased taxonomic effort for the discovery of more species and their geographical distribution information. During this process, species collected only from a single specimen/locality often appear. However, there are very few empirical data available to understand the current situation of single specimen/locality species in insect taxonomy. In this paper, we collected 1261 articles containing 4811 insect species from ZooKeys between 2009 and 2017, and we extracted data, including the publication date, number of specimens/locality, and DNA usage. Our analyses demonstrated that 21.53% and 21.74% of new species were described from only one specimen and one locality, respectively, and approximately half of all new species were published based on fewer than five specimens. Meanwhile, the rate of single-specimen species in papers with or without DNA data was 15.06% and 23.43%, respectively, which indicates that incorporating DNA data in species descriptions might effectively decrease the occurrence of single-specimen species. We suggest that taxonomists should adopt more beneficial practices, such as increasing specimen diversity, incorporating DNA data, and improving international collaboration, in the description of new species. -
Staatliches Museum Für Naturkunde Karlsruhe – Rückblick Auf Das Jahr 2011 145-201 ©Staatl
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Carolinea - Beiträge zur naturkundlichen Forschung in Südwestdeutschland Jahr/Year: 2012 Band/Volume: 70 Autor(en)/Author(s): Lenz Norbert Artikel/Article: Staatliches Museum für Naturkunde Karlsruhe – Rückblick auf das Jahr 2011 145-201 ©Staatl. Mus. f. Naturkde Karlsruhe & Naturwiss. Ver. Karlsruhe e.V.; download unter www.zobodat.at carolinea, 70 (2012): 145-201, 55 Abb.; 4 Farbtaf.; Karlsruhe, 19.12.2012 145 Staatliches Museum für Naturkunde Karlsruhe – Rückblick auf das Jahr 2011 1 Überblick seum genutzten Räume des Museumsgebäudes erfolgen. Nach intensiven Planungen und weiteren vorbe- Zum vorbeugenden Brandschutz gehören alle reitenden Arbeiten begann im August 2011 die Maßnahmen, welche im Voraus die Entste- bereits seit Jahren angekündigte Umsetzung hung, Ausbreitung sowie die Auswirkung(en) von Brandschutzmaßnahmen im Hauptgebäu- von Bränden verhindern bzw. einschränken. Das de des Staatlichen Museums für Naturkunde Amt Karlsruhe von Vermögen und Bau Baden- Karlsruhe (SMNK). Der Baubeginn dieser Maß- Württemberg hat das Büro Kessler De Jonge nahmen stellte durchaus einen Einschnitt in der Architekten und Partner aus Heidelberg mit Geschichte des SMNK dar, läutete er doch nach der Planung und Bauleitung der Brandschutz- Jahren eines gewissen baulichen Stillstands eine maßnahmen beauftragt. Dazu gehören u.a. die Phase ein, in der das Museum eine Dauerbau- Fluchtwegplanung, ein Konzept zur Aufteilung stelle ist. Denn im Anschluss an die Umsetzung des Gebäudes in Brandabschnitte, die durch der Brandschutzmaßnahmen soll die ebenfalls Brandwände oder -schutztüren (mit oder ohne schon seit Jahren diskutierte Anbindung des Offenhaltung) getrennt sind, die Untersuchung Westflügels an die derzeit vom Naturkundemu- und im Bedarfsfall Optimierung von Baustoffen Abbildung 1.