Isolation of Bioluminescent Bacteria and Their Application in Toxicity Testing of Chromium in Water

Total Page:16

File Type:pdf, Size:1020Kb

Isolation of Bioluminescent Bacteria and Their Application in Toxicity Testing of Chromium in Water Int.J.Curr.Microbiol.App.Sci (2015) 4(10): 23-32 ISSN: 2319-7706 Volume 4 Number 10 (2015) pp. 23-32 http://www.ijcmas.com Original Research Article Isolation of Bioluminescent Bacteria and Their Application in Toxicity Testing of Chromium in Water Varsha Shivaji Kulkarni* and Bhagyashree Shashikant Kulkarni Department of Microbiology, Sinhgad College of Science, Ambegaon (Bk), Pune-411046, India *Corresponding author A B S T R A C T Nature has its own beauty and phenomenon called bioluminescence proves it. Marine fishes like Japanese Threadfin brin (Nemipterus japonicas), Indian Mackerel (Restrelliger kanagurta) and Anchovy (Engraulis japonicas) were chosen as source of bioluminescent bacteria. Scales, gills and eye portion along with gut region of Indian Mackerel were suspended overnight in sterile sea salt saline and from this loopful suspension were streak inoculated on sterile Photobacterium agar, LA, Sea water agar and Boss Agar. By subsequent subculturing two luminescent isolates K e y w o r d s named as C1, C2 were obtaining on LA plate from the gut portion of the Indian Mackerel. They were used for further study. Morphological and biochemical Biolumine- characterization along with observation of PHB granules under light microscope scence, suggests that the isolates may belong to Genus Vibrio. To reconfirm these results the Luciferase, isolates were inoculated on TCBS agar which is the highly specific media for the Auto- Vibrio identification and confirmation; which confirmed that the isolate C1 may be induction, late sucrose fermenter Vibrio species. This isolate showed green coloured colonies Pollutant after 36hrs of incubation. The TSI slant examination stated that the organisms were chromium, Gram negative enteric pathogen that ferments glucose, lactose and sucrose by acid Toxicity production without accumulation of gas. After examination of growth pattern of both testing isolates; C1 and C2 were used for the checking toxicity of the chemical pollutant cultivation chromium in water. According to the United States Environmental Protection Agency for primary drinking water the standard Maximum Contaminant Level is 0.1 mg/L for total chromium. Standard protocols were used to determine total chromium level in water. Performance of the TVC of the both isolates lead to the results that the pollutant chromium inhibits the growth of bioluminescent bacteria and also affects the luminescence intensity. This whole study provides eco friendly and cost effective examination of pollutant chromium. The method can also be used to measure other chemicals, metal salts like mercuric chloride, zinc chloride and lead acetate etc. Introduction Bioluminescence a Greek word ( Bios for This type of chemiluminescent phenomenon living and Latin word lumen for light ) have been seen in many types of organisms which literally means a living light. (bacteria, fungi, fishes, squid, 23 Int.J.Curr.Microbiol.App.Sci (2015) 4(10): 23-32 dinoflagellates) and have always gained an bacteria and algae gaining the attention for a attention of scientists because of their toxicity evaluation as a model organisms beauty, physiology, biochemistry, genetics (Roda et al., 2004; Boynton, 2009). As well and ease of detection (Lee 2008; known; general metabolism, operon Vedprakash et al., 2014). In late 19th century expression, bacterial growth, cultural Raphael Dubois experimentally extracted condition affects the luminescence activity; the two key components, enzyme from which one can articulate that the luciferase and luciferine of bioluminescent organisms are very much bioluminescence reaction which are able to sensitive to any change (e.g. physical, generate light (Makemson, 1986; Lee, chemical, radiological, etc.) in environment. 2008). Many bacteria regulate their set of Bioluminescent bacterial tests have been lux genes by the mechanism of quorum successfully used previously in determining sensing or autoinduction in which the toxicity of aquatic samples, sediments, autoinducers (AI) evoke the characteristic and soils (Lapota et al., 1998; Kurvet et al., response from the cell (Rees et al., 1998; 2005). Nyholm et al., 2004; Walker et al., 2006). In bioluminescence after achieving specific Materials and Methods Anchovy (local name: Mandeli); Indian threshold value (conc. of AI 10 cell mL ¹ in Mackerel (local name: Bangda); and Threadfin brin (local name: Raja Rani) these three fresh marine water fishes were selected culture media) it triggers the synthesis of as a source of bioluminescent bacteria and enzyme luciferase and other enzymes were obtained from fish market near Alpna involved in luminescence (Cao and Meighen Talkies, Camp, Pune. They were kept on ice and soon after brought to the laboratory for further processes. 1989; Rees et al., 1998 Walker et al., 2006; Following fish parts were used as a source for luminescent bacteria (Table 1) (Walker et al., 2006, web links). Berleman, 2009 . This sensing (AI level) Table.1 Fish parts used for luminescent bacteria help to ensure that the luminescence Eye Gill Scales Fin Gut production is enough high to cause an portion region impact in environment and making the Anchovy - Used Used - - process cost effective (Nealson et al., 1970; Mackerel - Used Used - Used Visick et al., 2000). As the production of the Fim Used Used Used Dorsal - luminose enzyme increases ultimately light bream fin generation also increases (Nealson et al., 1970; Cao and Meighen, 1989; Berleman, These different parts were suspended in 2009). sterile sea saline that is 3.5g of sea salt in 100ml distilled water for 24hrs and from this Due to the issues raised by animal rights and loopful suspension was streaked for human rights, the use of microbes like isolation (Web link) on sterile 24 Int.J.Curr.Microbiol.App.Sci (2015) 4(10): 23-32 Photobacterium agar (PBA) casein enzyme selective for Vibrios and differential due to hydrolysate 5g/L, yeast extract 2g/L, presence of sucrose and the dyes. TCBS ammonium chloride 0.3g/L, magnesium agar (proteose peptone 10g/L, yeast extract sulfate 0.3g/L, ferric chloride 0.01g/L, 5g/L, sodium thiosuphate 10g/L, sodium calcium chloride 1g/L, potassium phosphate citrate 10g/L, oxagall 8g/L, sucrose 20g/L, (monobasic) 3g/L, sodium glycerophosphate NaCl 10g/L, ferric citrate 1g/L, 23.5g/L, sodium chloride 30g/L, agar 15g/L bromothymol blue 0.40g/L, thymol blue (web link), sea water agar Part A: yeast 0.40g/L, agar 15g/L, pH 8.6±0.2 at 25 C, extract 5g/L, peptic digests of animal tissue formula adjusted, standardized) is highly 5g/L, beef extract 3g/L, agar 15g/L, Part B: selective, meets the nutritional requirements sodium chloride 24g/L, potassium chloride of Vibrio spp., and allows Vibrios to 0.7g/L, magnesium chloride. 6H O 5.3g/L, compete with intestinal flora (Engebrech et magnesium sulfate. 7H O.7g/L, calcium al., 1983; Musa et al., 2008; Ransanga et al., chloride0.1g/L, pH 7.3 +/ 0.2 (web link), 2012; Kannahi and Shivshankari, 2014) Luminus agar (LA) sodium chloride 10g/L, TCBS Agar is recommended by APHA yeast extract 5g/L, peptone10g/L, (American Public Health Association) for agar15g/L, pH 7.3 (web link) and the selective isolation of V. cholerae and V. bioluminescent agar (Boss agar) sodium parahaemolyticus. Enrichment in alkaline chloride30g/L, glycerol1g/L, peptone10g/L, peptone water (M618), followed by isolation meat extract3g/L, pH 7.3 plates (web link). on TCBS Agar is routinely used for isolation Plates were incubated at RT for 48 72hrs of V. cholerae. Vibrios are natural and observed for bioluminescence (web inhabitants of sea water (Kumar, 2010). It is link). possible that a few sucrose-positive Proteus strains can grow to form yellow colonies. Identification of isolated bioluminescent Vibrio parahaemolyticus is a sucrose non- species fermenting organism and produces blue- green colonies, as does Vibrio vulnificus Two isolates were obtained by subsequent (Engebrech et al., 1983; Musa et al., 2008; sub-culturing on sterile LA plates. The Orengo et al., 2010; Ransanga et al., 2012; isolated were named as C1 and C2. After Kannahi and Shivshankari, 2014). morphological colony characterization, Gram staining, motility and Poly- -hydroxy- Triple sugar iron agar (TSI) butyrate staining (by Sudan Black B method) were performed (Bergey s manual TSI is recommended in the identification of 9th edition, web link). Bergey s Manual of gram-negative enteric pathogens in routine determinative Bacteriology 9th edition was examination of faeces. This medium referred and accordingly biochemical tests indicates the ability of an organism to like IMViC, amylase, oxidase, nitrate ferment lactose, sucrose and glucose with reduction were performed and fermentation formation of acid and gas and also its ability of sugars were also checked with 12 to produce hydrogen sulfide gas (Musa et different sugars (Table 2). al., 2008; Kumar, 2010; Ransanga et al., 2012; Kannahi and Shivshankari, 2014) Growth on Thiosulfate Citrate Bile (Table 3 and 4). Sucrose Agar (TCBS) Growth curve TCBS Agar is both differential and highly 25 Int.J.Curr.Microbiol.App.Sci (2015) 4(10): 23-32 Loopful of 24 hr old culture of isolate C1 Orange Indicator solution, Conc. and isolate C2 were inoculated in 50 ml Ammonium hydroxide, Potassium Sterile Luminous Broth(LB) and were kept permanganate solution: Dissolve 4 g overnight till absorbance reached 0.1 at 600 KMnO in 100ml water, Diphenylcarbazide nm. After 0.1 absorbance was reached, solution: Dissolve 250 mg in 50ml acetone growth curve experiment was performed by and Store in brown
Recommended publications
  • FDA: "Glowing" Seafood?
    FDA: "Glowing" Seafood? http://web.archive.org/web/20080225162926/http://vm.cfsan.fda.gov/~ea... U.S. Food and Drug Administration Seafood Products Research Center July 1998 "GLOWING" SEAFOOD? by Patricia N. Sado* Introduction Seafood that produces a bright, blue-green light in the dark could be a meal from outer space or haute cuisine in a science fiction novel. The U. S. Food and Drug Administration (FDA) has received many consumer complaints about various seafood products "glowing" in the dark. Some of these consumers called their local health departments, poison control centers, and their U.S. Senator because they thought they had been poisoned by radiation. These consumers said they had trouble convincing people that their seafood was emitting light. One consumer took his imitation crabmeat to a local television station. Unfortunately his seafood had dried out and did not glow for the television reporters. Several consumers said that it took them many weeks before they found phone numbers for various government agencies to make inquiries. Several consumers thought their "glowing" seafood was due to phosphorescing phytoplankton, or even fluorescence. The consumers' seafood products "glowing" in the dark were not due to radiation or to fluorescence, which requires an ultraviolet light to trigger the reaction. These seafood products exhibited luminescence due to the presence of certain bacteria that are capable of emitting light. Luminescence by bacteria is due to a chemical reaction catalyzed by luciferase, a protein similar to that found in fireflies. The reaction involves oxidation of a reduced flavin mononucleotide and a long chain aliphatic aldehyde by molecular oxygen to produce oxidized flavin plus fatty acid and light (5, 12).
    [Show full text]
  • Developments in Aquatic Microbiology
    INTERNATL MICROBIOL (2000) 3: 203–211 203 © Springer-Verlag Ibérica 2000 REVIEW ARTICLE Samuel P. Meyers Developments in aquatic Department of Oceanography and Coastal Sciences, Louisiana State University, microbiology Baton Rouge, LA, USA Received 30 August 2000 Accepted 29 September 2000 Summary Major discoveries in marine microbiology over the past 4-5 decades have resulted in the recognition of bacteria as a major biomass component of marine food webs. Such discoveries include chemosynthetic activities in deep-ocean ecosystems, survival processes in oligotrophic waters, and the role of microorganisms in food webs coupled with symbiotic relationships and energy flow. Many discoveries can be attributed to innovative methodologies, including radioisotopes, immunofluores- cent-epifluorescent analysis, and flow cytometry. The latter has shown the key role of marine viruses in marine system energetics. Studies of the components of the “microbial loop” have shown the significance of various phagotrophic processes involved in grazing by microinvertebrates. Microbial activities and dissolved organic carbon are closely coupled with the dynamics of fluctuating water masses. New biotechnological approaches and the use of molecular biology techniques still provide new and relevant information on the role of microorganisms in oceanic and estuarine environments. International interdisciplinary studies have explored ecological aspects of marine microorganisms and their significance in biocomplexity. Studies on the Correspondence to: origins of both life and ecosystems now focus on microbiological processes in the Louisiana State University Station. marine environment. This paper describes earlier and recent discoveries in marine Post Office Box 19090-A. Baton Rouge, LA 70893. USA (aquatic) microbiology and the trends for future work, emphasizing improvements Tel.: +1-225-3885180 in methodology as major catalysts for the progress of this broadly-based field.
    [Show full text]
  • Diversity and Evolution of Bacterial Bioluminescence Genes in the Global Ocean Thomas Vannier, Pascal Hingamp, Floriane Turrel, Lisa Tanet, Magali Lescot, Y
    Diversity and evolution of bacterial bioluminescence genes in the global ocean Thomas Vannier, Pascal Hingamp, Floriane Turrel, Lisa Tanet, Magali Lescot, Y. Timsit To cite this version: Thomas Vannier, Pascal Hingamp, Floriane Turrel, Lisa Tanet, Magali Lescot, et al.. Diversity and evolution of bacterial bioluminescence genes in the global ocean. NAR Genomics and Bioinformatics, Oxford University Press, 2020, 2 (2), 10.1093/nargab/lqaa018. hal-02514159 HAL Id: hal-02514159 https://hal.archives-ouvertes.fr/hal-02514159 Submitted on 21 Mar 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Published online 14 March 2020 NAR Genomics and Bioinformatics, 2020, Vol. 2, No. 2 1 doi: 10.1093/nargab/lqaa018 Diversity and evolution of bacterial bioluminescence genes in the global ocean Thomas Vannier 1,2,*, Pascal Hingamp1,2, Floriane Turrel1, Lisa Tanet1, Magali Lescot 1,2,* and Youri Timsit 1,2,* 1Aix Marseille Univ, Universite´ de Toulon, CNRS, IRD, MIO UM110, 13288 Marseille, France and 2Research / Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022 Tara GOSEE, 3 rue Michel-Ange, Downloaded from https://academic.oup.com/nargab/article-abstract/2/2/lqaa018/5805306 by guest on 21 March 2020 75016 Paris, France Received October 21, 2019; Revised February 14, 2020; Editorial Decision March 02, 2020; Accepted March 06, 2020 ABSTRACT ganisms and is particularly widespread in marine species (7–9).
    [Show full text]
  • Short Communication Isolation of Bioluminescent Bacteria From
    Indian Journal of Geo Marine Sciences Vol. 49 (03), March 2020, pp. 471-476 Short Communication Isolation of bioluminescent bacteria from widely distributed light emitting organisms are marine organisms luminescent bacteria. Such bioluminescent bacteria are either found in planktonic form in the ocean6-12 or Paritosh Parmar, Arpit Shukla, Meenu Saraf & Baldev Patel* in symbiotic relationship with the marine host for instance certain fishes and squids2,8,13-17. Department of Microbiology & Biotechnology, University School of Sciences, Gujarat University, Ahmedabad-380 009, India The reaction which is responsible for emission of *[E-mail: [email protected]] light involves the enzyme luciferase that oxidizes long chain aliphatic aldehyde (RCHO), reduced flavin Received 31 July 2018; 05 October 2018 mononucleotide (FMNH2), and oxygen (O2) to a long chain aliphatic acid (RCOOH), oxidized flavin Bioluminescence is an emission of cold light by enzyme driven reaction within certain living organisms. The most mononucleotide (FMN), and water (H2O). In this abundant and widely distributed light emitting organisms are process, the excess energy is liberated and emitted as luminescent bacteria. Such organisms are either found as free- luminescent blue-green light of 490 nm (Fig. 1)4. All living in the ocean or in symbiotic relationship with the marine luminescent bacteria are distributed among three host. To employ bioluminescence in environmental monitoring, 4,18 isolation of bioluminescent bacteria from the two different marine genera Vibrio, Photobacterium, Xenorhabdus . samples (sea water sample and various organs of squid and fish) However, recently one more genera Kurthia has also were collected from different sites of Veraval seashore and fish been reported to be luminescent19.
    [Show full text]
  • Isolation and Identification of Bioluminescent Bacteria in Squid and Water of Malaysia
    Int'l Journal of Advances in Agricultural & Environmental Engg. (IJAAEE) Vol. 1, Issue 2 (2014) ISSN 2349-1523 EISSN 2349-1531 Isolation And Identification Of Bioluminescent Bacteria In Squid And Water Of Malaysia Noor Aini Yaser1, Mohd Faiz Foong Abdullah2, Aslizah Mohd Aris3, Iwana Izni Zainudin3 also in marine ecosystem. Abstract— Bioluminescence is an emission of light that produce These bioluminescent bacteria reported belong to the class by chemical reaction of enzymatic activity and biochemical of the Gammaproteobacteria. Among the bioluminescent bacteria living organism. The most abundant and widely distributed light reported, 17 bioluminescent species were currently known [7]. emitting organism is luminous bacteria either found as free-living in The luminous bacteria were also classified into three genera the ocean or gut symbiont in the host. These sets of species are diversely spread in terrestrial environment, freshwater and also in which are Vibrio, Photobacterium and Xenorhabdus marine ecosystem. These species of bacteria emit blue-green light (Photorhabdus) and the species within the genus Vibrio and provoked by the enzyme luciferase and regulated by the lux gene Photobacterium are usually exist in marine environment and operon and emitted at 490 nm. Some of the uses of the Xenorhabdus belong to terrestrial environment. bioluminescence are as genetic reporters and biosensors. General Some of the natural important of the bioluminescence in microbiological techniques have been used to isolate bioluminescent nature is in attracting prey, camouflage, deterring predators bacteria from water samples and squid. The characterization of 6 isolates bioluminescent bacteria was conducted macroscopic and and in aiding in hunting [8]. microscopically and was further analyses at molecular level using Bioluminescence is the phenomenon that consists of light 16sDNA and sequenced for species identification.
    [Show full text]
  • Shedding Light on the Bioluminescence “Paradox” Although Luminescence Provides Host Squids with Obvious Advantages, How Does It Benefit Light-Producing Bacteria?
    Shedding Light on the Bioluminescence “Paradox” Although luminescence provides host squids with obvious advantages, how does it benefit light-producing bacteria? Eric V. Stabb he fascinating biochemistry, genetics, have special significance for this bacterium. Bi- and cell density-dependent regula- oluminescence offers many such puzzles, and it tion of bacterial bioluminescence is unlikely a single solution will solve them all. T provoke a challenging question. Nonetheless, it is an exciting moment in bio- What good is it to bioluminescent luminescence research, with recent advances of- bacteria? fering the promise of answering the longstand- There may be no single answer to this seem- ing question, “how can bioluminescence ingly simple question. However, two recent ad- help bacteria?” Although researchers learned vances shed new light on the problem. First, nearly a century ago that luminescence reduces studies of the symbiosis between the biolumines- oxygen and that symbiotic bacteria inhabit the cent bacterium Vibrio fischeri and the Hawaiian light organs of squids, what was unimaginable bobtail squid bring an ecologically relevant until very recently is our ability to analyze the V. niche for a bioluminescent bacterium into focus fischeri genome sequence and to combine this under the discerning lens of controlled labora- knowledge with the ability to genetically manip- tory experimentation. Second, progress in under- ulate these bacteria and observe them under standing the genetics of V. fischeri, including controlled laboratory conditions in the ecologi- genomic sequencing of a squid symbiont, is en- cally relevant environment of a natural squid abling researchers to analyze how luminescence host. integrates into the physiology of this bacterial species and to test specific hypotheses about Biochemistry and Genetics of what advantage light production confers on the V.
    [Show full text]
  • Diversity and Evolution of Bacterial
    Published online 14 March 2020 NAR Genomics and Bioinformatics, 2020, Vol. 2, No. 2 1 doi: 10.1093/nargab/lqaa018 Diversity and evolution of bacterial bioluminescence genes in the global ocean Thomas Vannier 1,2,*, Pascal Hingamp1,2, Floriane Turrel1, Lisa Tanet1, Magali Lescot 1,2,* and Youri Timsit 1,2,* 1Aix Marseille Univ, Universite´ de Toulon, CNRS, IRD, MIO UM110, 13288 Marseille, France and 2Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 3 rue Michel-Ange, 75016 Paris, France Received October 21, 2019; Revised February 14, 2020; Editorial Decision March 02, 2020; Accepted March 06, 2020 ABSTRACT ganisms and is particularly widespread in marine species (7–9). The luciferase enzymes that catalyze the emission Although bioluminescent bacteria are the most abun- of photons have evolved independently over 30 times, by dant and widely distributed of all light-emitting or- convergence from non-luminescent enzymes (10,11). Al- ganisms, the biological role and evolutionary history though bioluminescent bacteria are the most abundant and of bacterial luminescence are still shrouded in mys- widely distributed of all light-emitting organisms (7,12), tery. Bioluminescence has so far been observed in certain functional and evolutionary aspects of bacterial lu- the genomes of three families of Gammaproteobac- minescence still remain enigmatic, such as its biological role teria in the form of canonical lux operons that adopt which remains a matter of debate (13). Early on biolumines- the CDAB(F)E(G) gene order. LuxA and luxB encode cence was proposed to have evolved from ancient oxygen- the two subunits of bacterial luciferase responsi- detoxifying mechanisms (14–16).
    [Show full text]
  • Culture Parameters Affect the Light Emitting Property of Organisms Isolated from Two Marine Fishes
    ACTA SCIENTIFIC MICROBIOLOGY (ISSN: 2581-3226) Volume 3 Issue 5 May 2020 Research Article Culture Parameters Affect the Light Emitting Property of Organisms Isolated from Two Marine Fishes Anuradha Pandey Dubey and Madhuri Sharon* Received: March 04, 2020 Walchand Centre for Research in Nanotechnology and Bionanotechnology, Published: April 16, 2020 WCAS, Solapur, Maharashtra India © All rights are reserved by Anuradha *Corresponding Author: Madhuri Sharon, Walchand Centre for Research in Pandey Dubey and Madhuri Sharon. Nanotechnology and Bionanotechnology, WCAS, Solapur, Maharashtra India. Abstract Stolephorus indicus and Nemipterus japonicus Organisms were isolated and cultured from two marine fishes ( ) that were exhibiting - Bioluminescence. Identification and assessment of impact of five different culture media on the growth and light emission properties gested that the microbes belonged to Vibrio spp and Photobacterium were studied. Isolates from both the fishes showed microbes to be gram negative Coccobacilli, Partial gene sequencing analysis sug - spp. Biochemical analysis of both the bacterial isolates exhibited difference in sugar (Mannitol and Lactose), LDC, Indole and Urea content; suggesting that the two isolated colonies are different bio of luminescence of the bacteria and eventually loss of luminescence property occurred. However, luminescence was revived when luminescent bacteria. Repeated subculture (to obtain pure colonies) of both the isolates resulted in gradual reduction in the intensity they were grown in aerated condition. Keywords: Bioluminescence; Anchovy Fish; Threadfin Bream Fish; Growth Curve; Lux Operon; Luciferase; Boss Medium Introduction Many attempts have been made by researchers to apply bio- Bioluminescence has attracted interest of researchers due to its luminescent reactions in practice including environmental pro- immense applications in the near future.
    [Show full text]
  • Structure of Bacterial Luciferase Thomas O Baldwin, Jon a Christopher, Frank M Raushel, James F Sinclair, Miriam M Ziegler, Andrew J Fisher and Ivan Rayment
    Structure of bacterial luciferase Thomas O Baldwin, Jon A Christopher, Frank M Raushel, James F Sinclair, Miriam M Ziegler, Andrew J Fisher and Ivan Rayment Texas A&M University, College Station and University of Wisconsin, Madison, USA The generation of light by living organisms such as fireflies, glow-worms, mushrooms, fish, or bacteria growing on decaying materials has been a subject of fascination throughout the ages, partly because it occurs without the need for high temperatures. The chemistry behind the numerous bioluminescent systems is quite varied, and the enzymes that catalyze the reactions, the luciferases, are a large and evolutionarily diverse group. The structure of the best understood of these intriguing enzymes, bacterial luciferase, has recently been determined, allowing discussion of features of the protein in structural terms for the first time. Current Opinion in Structural Biology 1995, 5:798-809 Introduction formation of C4a hydroxyflavin (the flavin pseudobase) in the excited state (Fig. 1). Light emission apparently Luciferase is a generic name for any enzyme that occurs from the pseudobase, which then dehydrates to catalyzes a reaction that results in the enfission of light of yield FMN, the flavin product, which dissociates from sufficient intensity to be of biological consequence; that the enzyme. The reaction has been discussed in detail in is, bright enough to be observed by another organism. a recent review [2]. The purpose of the present review Other than catalyzing light emission, different luciferases is to discuss various features of bacterial luciferase and have little in common. All luciferases catalyze oxidative the luciferase-catalyzed reaction in the context of the processes in which an intermediate (or product) is recently-determined high-resolution structure [3°°].
    [Show full text]
  • Bacterial Bioluminescence – Ecology and Impact in the Biological Carbon Pump
    Biogeosciences, 17, 3757–3778, 2020 https://doi.org/10.5194/bg-17-3757-2020 © Author(s) 2020. This work is distributed under the Creative Commons Attribution 4.0 License. Reviews and syntheses: Bacterial bioluminescence – ecology and impact in the biological carbon pump Lisa Tanet1;, Séverine Martini1;, Laurie Casalot1, and Christian Tamburini1 1Aix Marseille Univ., Université de Toulon, CNRS, IRD, MIO UM 110, 13288 Marseille, France These authors contributed equally to this work. Correspondence: Christian Tamburini ([email protected]) Received: 21 February 2020 – Discussion started: 19 March 2020 Revised: 5 June 2020 – Accepted: 14 June 2020 – Published: 17 July 2020 Abstract. Around 30 species of marine bacteria can emit 1 Introduction light, a critical characteristic in the oceanic environment is mostly deprived of sunlight. In this article, we first review current knowledge on bioluminescent bacteria symbiosis in Darkness constitutes the main feature of the ocean. Indeed, light organs. Then, focusing on gut-associated bacteria, we the dark ocean represents more than 94 % of the Earth’s hab- highlight that recent works, based on omics methods, con- itable volume (Haddock et al., 2017). Moreover, the surface firm previous claims about the prominence of biolumines- waters are also in dim light or darkness during nighttime. cent bacterial species in fish guts. Such host–symbiont re- Organisms living in the dark ocean biome are disconnected lationships are relatively well-established and represent im- from the planet’s primary source of light. They must adapt portant knowledge in the bioluminescence field. However, to a continuous decrease in sunlight reaching total darkness the consequences of bioluminescent bacteria continuously beyond a few hundred meters.
    [Show full text]
  • Quorum Sensing in Vibrios and Cross-Species Activation Of
    University of Wisconsin Milwaukee UWM Digital Commons Theses and Dissertations May 2013 Quorum Sensing in Vibrios and Cross-Species Activation of Bioluminescence Lux Genes by Vibrio Harveyi LuxR in an Arabinose-Inducible Escherichia Coli Expression System Anne Marie Wannamaker University of Wisconsin-Milwaukee Follow this and additional works at: https://dc.uwm.edu/etd Part of the Evolution Commons, Microbiology Commons, and the Molecular Biology Commons Recommended Citation Wannamaker, Anne Marie, "Quorum Sensing in Vibrios and Cross-Species Activation of Bioluminescence Lux Genes by Vibrio Harveyi LuxR in an Arabinose-Inducible Escherichia Coli Expression System" (2013). Theses and Dissertations. 177. https://dc.uwm.edu/etd/177 This Thesis is brought to you for free and open access by UWM Digital Commons. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of UWM Digital Commons. For more information, please contact [email protected]. QUORUM SENSING IN VIBRIOS AND CROSS-SPECIES ACTIVATION OF BIOLUMINESCENCE LUX GENES BY VIBRIO HARVEYI LUXR IN AN ARABINOSE-INDUCIBLE ESCHERICHIA COLI EXPRESSION SYSTEM by Anne Marie Wannamaker A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science in Biological Sciences at The University of Wisconsin-Milwaukee May 2013 ABSTRACT QUORUM SENSING IN VIBRIOS AND CROSS-SPECIES ACTIVATION OF BIOLUMINESCENCE LUX GENES BY VIBRIO HARVEYI LUXR IN AN ARABINOSE-INDUCIBLE ESCHERICHIA EXPRESSION SYSTEM by Anne Marie Wannamaker The University of Wisconsin-Milwaukee, 2013 Under the Supervision of Dr. Charles Wimpee Bacterial bioluminescence is observed in over twenty known species, primarily in the family Vibrionaceae. However, only Vibrio fischeri and Vibrio harveyi bioluminescence expression mechanisms are well studied.
    [Show full text]
  • Bacterial Bioluminescence: Light Emission in Photobacterium Phosphoreum Is Not Under Quorum-Sensing Control
    fmicb-10-00365 March 1, 2019 Time: 12:13 # 1 ORIGINAL RESEARCH published: 04 March 2019 doi: 10.3389/fmicb.2019.00365 Bacterial Bioluminescence: Light Emission in Photobacterium phosphoreum Is Not Under Quorum-Sensing Control Lisa Tanet, Christian Tamburini, Chloé Baumas, Marc Garel, Gwénola Simon and Laurie Casalot* Aix Marseille Univ., Université de Toulon, CNRS, IRD, MIO UM 110, Marseille, France Bacterial-bioluminescence regulation is often associated with quorum sensing. Indeed, many studies have been made on this subject and indicate that the expression of the light-emission-involved genes is density dependent. However, most of these Edited by: James Cotner, studies have concerned two model species, Aliivibrio fischeri and Vibrio campbellii. University of Minnesota Twin Cities, Very few works have been done on bioluminescence regulation for the other United States bacterial genera. Yet, according to the large variety of habitats of luminous marine Reviewed by: Jürgen Tomasch, bacteria, it would not be surprising to find different light-regulation systems. In this Helmholtz Association of German study, we used Photobacterium phosphoreum ANT-2200, a piezophilic bioluminescent Research Centres (HZ), Germany strain isolated from Mediterranean deep-sea waters (2200-m depth). To answer the Elisa Michelini, University of Bologna, Italy question of whether or not the bioluminescence of P. phosphoreum ANT-2200 is *Correspondence: under quorum-sensing control, we focused on the correlation between growth and Laurie Casalot light emission through physiological, genomic and, transcriptomic approaches. Unlike [email protected]; [email protected] A. fischeri and V. campbellii, the light of P. phosphoreum ANT-2200 immediately increases from its initial level.
    [Show full text]