2018 Cracking the Memory Code Since 1983
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Biology, Bioinformatics, Bioengineering, Biophysics, Biostatistics, Neuroscience, Medicine, Ophthalmology, and Dentistry
Biology, Bioinformatics, Bioengineering, Biophysics, Biostatistics, Neuroscience, Medicine, Ophthalmology, and Dentistry This section contains links to textbooks, books, and articles in digital libraries of several publishers (Springer, Elsevier, Wiley, etc.). Most links will work without login on any campus (or remotely using the institution’s VPN) where the institution (company) subscribes to those digital libraries. For De Gruyter and the associated university presses (Chicago, Columbia, Harvard, Princeton, Yale, etc.) you may have to go through your institution’s library portal first. A red title indicates an excellent item, and a blue title indicates a very good (often introductory) item. A purple year of publication is a warning sign. Titles of Open Access (free access) items are colored green. The library is being converted to conform to the university virtual library model that I developed. This section of the library was updated on 06 September 2021. Professor Joseph Vaisman Computer Science and Engineering Department NYU Tandon School of Engineering This section (and the library as a whole) is a free resource published under Attribution-NonCommercial-NoDerivatives 4.0 International license: You can share – copy and redistribute the material in any medium or format under the following terms: Attribution, NonCommercial, and NoDerivatives. https://creativecommons.org/licenses/by-nc-nd/4.0/ Copyright 2021 Joseph Vaisman Table of Contents Food for Thought Biographies Biology Books Articles Web John Tyler Bonner Morphogenesis Evolution -
The Similarity Structure of Real-World Memories
bioRxiv preprint doi: https://doi.org/10.1101/2021.01.28.428278; this version posted January 30, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. The Similarity Structure of Real-World Memories Tyler M. Tomita1, Morgan D. Barense 2;3 & Christopher J. Honey1 1Department of Psychological & Brain Sciences, Johns Hopkins University, Baltimore, MD, USA 2Department of Psychology, University of Toronto, Toronto ON, Canada 3Rotman Research Institute, Baycrest Hospital, Toronto ON, Canada How do we mentally organize our memories of life events? Two episodes may be connected because they share a similar location, time period, activity, spatial environment, or social and emotional content. However, we lack an understanding of how each of these dimensions contributes to the perceived similarity of two life memories. We addressed this question with a data-driven approach, eliciting pairs of real-life memories from participants. Participants annotated the social, purposive, spatial, temporal, and emotional characteristics of their memories. We found that the overall sim- ilarity of memories was influenced by all of these factors, but to very different extents. Emotional features were the most consistent single predictor of overall memory similarity. Memories with dif- ferent emotional tone were reliably perceived to be dissimilar, even when they occurred at similar times and places and involved similar people; conversely, memories with a shared emotional tone were perceived as similar even when they occurred at different times and places, and involved dif- ferent people. -
The Curious Complexity Between Confidence and Accuracy In
4 The Curious Complexity between Confi dence and Accuracy in Reports from Memory HENRY L. ROEDIGER III, JOHN H. WIXTED, AND K. ANDREW DESOTO Th e relation between the probability of remembering an event and one’s confi dence in it seems obvious: Th e more confi dent a person is in remember- ing an event, the more accurate he or she will be (and vice versa). Imagine giv- ing people a series of events to remember every day for a week, say 10 per day. Th e events could be sentences such as “Th e hippie touched the debutante in the park” or “Th e policeman arrested the homeless woman near the movie theater.” Th en, on the seventh day, people could be asked to recall (or recognize) all the sentences that had been presented that seventh day, and those from the third day of the experiment, and to rate the confi dence of each reported memory. It would surprise no one to learn that people would correctly remember more sentences from the seventh day than from the third day; surely they would be more accurate for the recent memories. In addition, there is no doubt that their confi dence would track their accuracy if confi dence were measured on, say, a 7-point rating scale (from 7 = sure the event happened to 1 = sure the event did not happen). People would be much more confi dent for the recently presented sentences than for those heard 4 days previously. Th e reason people can intuit the result of this experiment so accurately is that we essentially live this exper- iment every day of our lives. -
Extinction Learning with Social Support Depends on Protein Synthesis in Prefrontal Cortex but Not Hippocampus
Extinction learning with social support depends on protein synthesis in prefrontal cortex but not hippocampus Clarissa Penha Fariasa,b, Cristiane Regina Guerino Furinia,b, Eduarda Godfried Nachtigalla, Jonny Anderson Kielbovicz Behlinga, Eduardo Silva de Assis Brasila, Letícia Bühlera, Ivan Izquierdoa,b,1, and Jociane de Carvalho Myskiwa,b,1 aMemory Center, Brain Institute of Rio Grande do Sul, Pontifical Catholic University of Rio Grande do Sul, 90610-000 Porto Alegre, RS, Brazil; and bNational Institute of Translational Neuroscience (INNT), National Research Council of Brazil, Federal University of Rio de Janeiro, 21941-902 Rio de Janeiro, Brazil Contributed by Ivan Izquierdo, November 13, 2018 (sent for review September 13, 2018; reviewed by Michel Baudry and Benno Roozendaal) Extinction of contextual fear conditioning (CFC) in the presence of In the current paper, we first examined the effect of S by a a familiar nonfearful conspecific (social support), such as that of familiar nonfearful conspecific during an unreinforced retrieval on others tasks, can occur regardless of whether the original memory the extinction memory of contextual FC (CFC). Then, we study is retrieved during the extinction training. Extinction with social the effects of a ribosomal protein synthesis inhibitor, anisomycin support is blocked by the protein synthesis inhibitors anisomycin (Ani); a mammalian target of rapamycin- (Rapa-) (mTOR-) de- and rapamycin and by the inhibitor of gene expression 5,6-dichloro-1- pendent protein synthesis inhibitor, Rapa; and a gene expression β-D-ribofuranosylbenzimidazole infused immediately after extinction inhibitor, 5,6-dichloro-1-β-D-ribofuranosylbenzimidazole (DRB) training into the ventromedial prefrontal cortex (vmPFC) but unlike on fear extincion memory of CFC with S when infused into the regular CFC extinction not in the CA1 region of the dorsal hippocam- CA1 region of the dorsal hippocampus or ventromedial prefrontal pus. -
IN the PURSUIT of the FEAR ENGRAM: Identification of Neuronal Circuits Underlying the Treatment of Anxiety Disorder
IN THE PURSUIT OF THE FEAR ENGRAM: Identification of neuronal circuits underlying the treatment of anxiety disorder THÈSE NO 7642 (2017) PRÉSENTÉE LE 2 NOVEMBRE 2017 À LA FACULTÉ DES SCIENCES DE LA VIE CHAIRE NESTLÉ - UNITÉ DU PROF. GRÄFF PROGRAMME DOCTORAL EN NEUROSCIENCES ÉCOLE POLYTECHNIQUE FÉDÉRALE DE LAUSANNE POUR L'OBTENTION DU GRADE DE DOCTEUR ÈS SCIENCES PAR Ossama Mohamed Salah El-Dien El-Sayed Ibrahim KHALAF acceptée sur proposition du jury: Prof. W. Gerstner, président du jury Prof. J. Gräff, directeur de thèse Prof. D. de Quervain, rapporteur Prof. S. Josselyn , rapporteuse Prof. C. Sandi, rapporteuse Suisse 2017 In the midst of his laughter and glee, He had softly and suddenly vanished away— For the Snark was a Boojum, you see. -Lewis Caroll The Hunting of the Snark (1876) by Lewis Carroll Cover of the first edition by Henry Holiday. U Acknowledgements Science may set limits to knowledge, but should not set limits to imagination. -Bertrand Russell Gibran Khalil Gibran once argued that a pundit spends his life in the pursuit of knowledge, but if one day he said I have had it all, then this would be the moment of his utmost ignorance. In life, in this very journey, we all share the same start of nascence and the inevitable destination of death, yet the path one takes to complete this voyage is essentially different from one another. Many factors could influence shaping these routes, and serendipity was central in moulding mine! It all started when I have first heard the story of Phineas Gage - the most famous brain-injury survivor - at the master’s defense of my eldest neurosurgeon brother. -
Ivan Izquierdo
Ivan Izquierdo BORN: Buenos Aires, Argentina September 16, 1937 EDUCATION: University of Buenos Aires, M.D. (1961) University of Buenos Aires, Ph.D. (1962) APPOINTMENTS: Assistant Research Anatomist, UCLA (1964) Assistant Professor of Pharmacology, University of Buenos Aires (1965) Professor of Pharmacology, University of Córdoba (1966) Professor of Pharmacology, Federal University of Rio Grande do Sul, Brazil (1973) Professor of Physiology, Escola Paulista de Medicina, Sao Paulo (1975) Professor of Biochemistry, Federal University of Rio Grande do Sul, Brazil (1978) Professor of Neurology and Chairman of the Memory Center, Pontifi cal Catholic University of Rio Grande do Sul, Brazil (2004–present) HONORS AND AWARDS (SELECTED): Odol Prize for Junior Scientists, National Research Council of Argentina (1965) Honorary Professor, Universities of Buenos Aires (1991) and Córdoba (2006) Antonì Esteve Prize, Antonì Esteve Foundation, Barcelona (1992) Rheinboldt-Hauptmann Prize, University of Sao Paulo (1993) Basic Medicine Award, Academy of Sciences of the Developing World (1995) City of Porto Alegre Medal for outstanding services to the community (1996) Decorations: Great Cross, Order of Scientifi c Merit, (1996) and Order of Rio Branco (2007), both from the Government of Brazil, and Medal of Merit, State Legislature of Rio Grande do Sul (2009) John Simon Guggenheim Award (1997) Açorianos Literary Prize, the City of Porto Alegre (1999) Memorial Lectures: J.A. Izquierdo (1999), O. Orias (1999), A. Thomson (1999), M.R. Covian (2000), J. Flood (2000), R. Caputto (2000), C.P. Duncan (2001), S.C. Ferguson (2009) and H-J. Matthies (2010) Lifetime Awards: State Research Foundation, Porto Alegre (2001), International Neuropsychiatric Association (2005), Brazilian Neuroscience Society (2007) Honorary Citizen of Porto Alegre (2003) International Neuroscience Symposium for my 70th birthday, Curitiba (2007) Doctor Honoris Causa, Federal University of Parana, Curitiba (2007), and University of Cordoba (2011). -
A Mathematical Model of Forgetting and Amnesia
ORIGINAL RESEARCH ARTICLE published: 28 February 2013 doi: 10.3389/fpsyg.2013.00076 A mathematical model of forgetting and amnesia Jaap M. J. Murre*, Antonio G. Chessa and Martijn Meeter Department of Psychology, University of Amsterdam, Amsterdam, Netherlands Edited by: We describe a mathematical model of learning and memory and apply it to the dynamics Oliver Hardt, McGill University, of forgetting and amnesia. The model is based on the hypothesis that the neural systems Canada involved in memory at different time scales share two fundamental properties: (1) repre- Reviewed by: Florentin Wörgötter, University sentations in a store decline in strength (2) while trying to induce new representations in Goettingen, Germany higher-level more permanent stores. This paper addresses several types of experimental Marco Steinhauser, Catholic and clinical phenomena: (i) the temporal gradient of retrograde amnesia (Ribot’s Law), (ii) University of Eichstätt-Ingolstadt, forgetting curves with and without anterograde amnesia, and (iii) learning and forgetting Germany curves with impaired cortical plasticity. Results are in the form of closed-form expres- *Correspondence: Jaap M. J. Murre, Department of sions that are applied to studies with mice, rats, and monkeys. In order to analyze human Psychology, University of Amsterdam, data in a quantitative manner, we also derive a relative measure of retrograde amnesia Weesperplein 4, Amsterdam 1018 XA, that removes the effects of non-equal item difficulty for different time periods commonly Netherlands. found with clinical retrograde amnesia tests. Using these analytical tools, we review stud- e-mail: [email protected] ies of temporal gradients in the memory of patients with Korsakoff’s Disease, Alzheimer’s Dementia, Huntington’s Disease, and other disorders. -
Comentário À Entrevista De Fúlvio Scorza
Revista Brasileira de Psicanálise · Volume 43, n. 3, 27-31 · 2009 27 Comentário à entrevista de Fúlvio Scorza Leila Tannous Guimarães,1 Campo Grande Resumo: Este texto é um comentário da entrevista concedida pelo Prof. Fúlvio Scorza à Revista Brasileira de Psicanálise. Visando a interface da neurociência com a psicanálise, o comentário destacou a relação entre neuroplasticidade e memória, corpo/mente, utilização combinada de drogas e psicoterapias e, por fim, a relação entre o consumo de drogas (álcool e cocaína), além do stress, como fatores lesivos aos neurônios e impeditivos da neurogênese. Palavras-chave: neurociência; psicanálise; memória; neuroplasticidade. Inicialmente gostaria de agradecer à equipe editorial da Revista Brasileira de Psicanálise, o honroso convite para comentar a entrevista realizada com o Prof. Fúlvio Scorza. Acompanhando o clima entusiasmado da entrevista e os aspectos instigantes que surgem no decorrer da mesma, convidei uma colega de sociedade, a quem tanto estimo e respeito por sua competência psicanalítica e interesse pessoal pelo tema, dra. Lenita Osorio Araujo para refletirmos em conjunto as questões que podem instigar o pensamento psicanalítico na interface com a neurociência e manter, assim, a chama viva e entusiasmada deste debate. Creio que vale sublinhar que esta entrevista nos deixa perceber que a interação entre a neurociência e a psicanálise tende a ser mais estimulante do que antes, permitindo que cada disciplina possa contribuir com seus aportes sem aquele tom de rivalidade pretensiosa em que se buscava ser o dono da verdade científica que revela os mistérios da mente huma- na. Muitas linhas de pesquisas atuais estão centradas na interpretação neurobiológica da consciência, mas, como dizia Green (2002), “o inconsciente dos psicanalistas segue fora do alcance dos neurobiologistas”. -
Letter from the Chair
PsychologiCALPsychologiCAL WINTERFALL 2014 2015 Psychologi Letter From the Chair Greetings, finalized, we are now turning to what may be the trickier Our students are just part of the planning process, working out the details arriving back on campus for the different programs. Psychology has special after winter break, and challenges given our need for space in which to conduct we’re gearing up for experiments, provide clinical services and training, another semester. and have highly interactive labs. To date, it’s been a lot I’m also “re- of information-gathering, surveying the Psychology orienting” in a sense, community to figure out the priorities of faculty, staff, as this semester will be and students, and hearing presentations from the my last as Department architects who are educating us on 21st-century building Chair. I use the quotes concepts to promote collaboration in university and because there is just so much sprouting up around industrial settings. the Department that I haven’t had a moment to start Not what I had anticipated doing with my PhD thinking about life beyond my office in 3210 Tolman, in cognitive psychology. But a very interesting process, nor how to begin the transition to our incoming chair, and one that will truly end up being translational as our Ann Kring. new building rises up from a parking lot over the coming The main task at hand remains planning for the years. new building, or what we call the Berkeley Way Project. Funding fell into place when the Governor signed the Best wishes for the new year, State budget last June authorizing the university to Rich commit part of its annual allocation to a building that will house large parts of Psychology, Public Health, and Education. -
Falsas Memórias E Sistema Penal
FALSAS MEMÓRIAS E SISTEMA PENAL: A PROVA TESTEMUNHAL EM XEQUE www.lumenjuris.com.br Editores João de Almeida João Luiz da Silva Almeida Conselho Editorial Adriano Pilatti Helena Elias Pinto Marcellus Polastri Lima Alexandre Morais da Rosa Jean Carlos Fernandes Marco Aurélio Bezerra de Cezar Roberto Bitencourt João Carlos Souto Melo Diego Araujo Campos João Marcelo de Lima As- Marcos Chut Emerson Garcia safim Nilo Batista Firly Nascimento Filho Lúcio Antônio Chamon Ricardo Lodi Ribeiro Frederico Price Grechi Junior Rodrigo Klippel Geraldo L. M. Prado Luigi Bonizzato Salo de Carvalho Gustavo Sénéchal de Gof- Luis Carlos Alcoforado Sérgio André Rocha fredo Manoel Messias Peixinho Sidney Guerra Conselheiro benemérito: Marcos Juruena Villela Souto (in memoriam) Conselho Consultivo Andreya Mendes de Almeida Scherer Francisco de Assis M. Tavares Navarro Gisele Cittadino Antonio Carlos Martins Soares João Theotonio Mendes de Almeida Jr. Artur de Brito Gueiros Souza Ricardo Máximo Gomes Ferraz Caio de Oliveira Lima Filiais Sede: Rio de Janeiro Minas Gerais (Divulgação) Centro – Rua da Assembléia, 36, Sergio Ricardo de Souza salas 201 a 204. [email protected] CEP: 20011-000 – Centro - RJ Belo Horizonte - MG Tel. (21) 2224-0305 Tel. (31) 9296-1764 São Paulo (Distribuidor) Santa Catarina (Divulgação) Rua Correia Vasques, 48 – Cristiano Alfama Mabilia CEP: 04038-010 [email protected] Vila Clementino - São Paulo - SP Florianópolis - SC Telefax (11) 5908-0240 Tel. (48) 9981-9353 Gustavo Noronha de Ávila FALSAS MEMÓRIAS E SISTEMA PENAL: A PROVA TESTEMUNHAL EM XEQUE Editora Lumen Juris Rio de Janeiro 2013 Copyright © 2013 by Gustavo Noronha de Ávila Produção Editorial Livraria e Editora Lumen Juris Ltda. -
Abstracts (PDF)
Abstracts of the Psychonomic Society — Volume 4 — November 1999 40th Annual Meeting — November 18–21, 1999 — Los Angeles, California Posters 1–6 Thursday Evening Papers and Posters Presented at the 40th Annual Meeting of the Psychonomic Society Century Plaza Hotel, Los Angeles, California November 18–21, 1999 POSTER SESSION I other animal forms (e.g., birds, cats, horses). We will also report vari- California Showroom, Thursday Evening, 7:00–8:30 ations across these displays in the orientation specificity of sensitiv- ity, discussing possible implications for accounts of biological mo- •PERCEPTION • tion perception. (1) (4) Deficits of Complex Form Perception and Attention in a Patient Representing the “What” and the “Where” of Undetected With Partial Achromatopsia. RACHEL E. SHOUP, University of Change. IAN M. THORNTON, Nissan Cambridge Basic Research, California, Davis, & JAMIE A. MAZER & JACK L. GALLANT, & DIEGO FERNANDEZ-DUQUE, University of Oregon—Studies of University of California, Berkeley—Physiological studies in non- change blindness demonstrate that we are seldom aware of everything human primates suggest that cortical area V4 is important for the per- that is before our eyes. However, these studies may be telling us more ception of both color and form. Cells in V4 are also modulated by at- about the limits of visual awareness than about the limits of visual rep- tention. Because humans with V4 lesions typically exhibit severe resentation. Specifically, we have suggested that the explicit reports achromatopsia, most studies of these patients have focused on color used for most change blindness tasks underestimate the visual system’s vision. We assessed form vision and attention in a patient, A.R., with ability to represent change. -
Working with Distraction
HIGHLIGHTS HIGHLIGHT ADVISORS ALLAN BASBAUM ATTENTION UNIVERSITY OF CALIFORNIA SAN FRANCISCO, CA, USA RANDY BUCKNER Working with distraction WASHINGTON UNIVERSITY, MO, USA The interaction between attention DAVID CLAPHAM (the ability to focus on certain stimuli HARVARD MEDICAL SCHOOL, to the detriment of others) and work- MA, USA ing memory (the ability to hold and PIETRO DE CAMILLI manipulate information in mind) is a YALE UNIVERSITY SCHOOL OF complex subject. It has been suggested MEDICINE, CT, USA that working memory might be cru- BARRY EVERITT cial in selective attention, and this idea UNIVERSITY OF CAMBRIDGE, received some much needed experi- UK mental support from a recent paper GORDON FISHELL from a team led by Nilli Lavie show- SKIRBALL INSTITUTE, NY, USA ing a causal role for working memory MARY KENNEDY in the control of selective attention. CALIFORNIA INSTITUTE OF Lavie had proposed that because triggered in the visual cortex. As During periods of high working TECHNOLOGY, CA, USA selective attention depends on active expected, subjects were slower to clas- memory demand, the subjects were LYNN NADEL maintenance of stimulus priorities in sify names paired with incongruent less able to filter out the distracting UNIVERSITY OF ARIZONA, working memory, a high working faces than those paired with congru- faces to focus on the task of classifying AZ, USA memory load should result in greater ent faces, and the presence of distrac- the written names. The distractor DENNIS O’LEARY processing of irrelevant (low priority) tor faces enhanced activity in areas of faces produced greater interference THE SALK INSTITUTE FOR distractors. J. W.de Fockert and col- visual cortex that selectively respond during the naming task and greater BIOLOGICAL STUDIES, CA, USA leagues examined this issue using to faces.