Temperate Macroalgae Impacts Tropical Fish Recruitment At
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Environmental Risk Limits for Triphenyltin in Water
Environmental risk limits for triphenyltin in water RIVM report 601714018/2012 R. van Herwijnen | C.T.A. Moermond | P.L.A. van Vlaardingen | F.M.W. de Jong | E.M.J. Verbruggen National Institute for Public Health and the Environment P.O. Box 1 | 3720 BA Bilthoven www.rivm.com Environmental risk limits for triphenyltin in water RIVM Report 601714018/2012 RIVM Report 601714018 Colophon © RIVM 2012 Parts of this publication may be reproduced, provided acknowledgement is given to the 'National Institute for Public Health and the Environment', along with the title and year of publication. R. van Herwijnen C.T.A. Moermond P.L.A. van Vlaardingen F.M.W. de Jong E.M.J. Verbruggen Contact: René van Herwijnen Expertise Centre for Substances [email protected] This investigation has been performed by order and for the account of the Ministry of Infrastructure and the Environment, Directorate for Sustainability, within the framework of the project 'Chemical aspects of the Water Framework Directive and the Directive on Priority Substances'. Page 2 of 104 RIVM Report 601714018 Abstract Environmental risk limits for triphenyltin in water RIVM has, by order of the Ministry of Infrastructure and the Environment, derived environmental risk limits for triphenyltin. This was necessary because the current risk limts have not been derived according to the most recent methodology. Main uses of triphenyltin were for wood preservation and as antifouling on ships. The use as antifouling has been banned within Europe since 2003. The Dutch Steering Committee for Substances will set new standards on the basis of the scientific advisory values in this report. -
(Actinopterygii: Pomacentridae) from Micronesia, with Comments on Its Phylogenetic Relationships Shang-Yin Vanson Liu1,2*†, Hsuan-Ching Hans Ho3† and Chang-Feng Dai1
Liu et al. Zoological Studies 2013, 52:6 http://www.zoologicalstudies.com/content/52/1/6 RESEARCH Open Access A new species of Pomacentrus (Actinopterygii: Pomacentridae) from Micronesia, with comments on its phylogenetic relationships Shang-Yin Vanson Liu1,2*†, Hsuan-Ching Hans Ho3† and Chang-Feng Dai1 Abstract Background: Many widely distributed coral reef fishes exhibit cryptic lineages across their distribution. Previous study revealed a cryptic lineage of Pomacentrus coelestis mainly distributed in the area of Micronesia. Herein, we attempted to use molecular and morphological approaches to descript a new species of Pomacentrus. Results: The morphological comparisons have been conducted between cryptic species and P. coelestis. Pomacentrus micronesicus sp. nov. is characterized by 13 to 16 (typically 15) anal fin rays (vs. 13 to 15, typically 14 rays in P. coelestis) and 15 or 16 rakers on the lower limb of the first gill arch (vs. 13 or 14 rakers in P. coelestis). Divergence in cytochrome oxidase subunit I sequences of 4.3% is also indicative of species-level separation of P. micronesicus and P. coelestis. Conclusions: P. micronesicus sp.nov.isdescribedfromtheMarshallIslands, Micronesia on the basis of 21 specimens. Both morphological and genetic evidences support its distinction as a separate species from P. coelestis. Keywords: Cryptic species; Pomacentrus micronesicus; Speciation Background Japan and is widely distributed in the Indo-Pacific region Marine organisms that are morphologically undistinguish- (Allen 1991). Liu et al. (2012) conducted a phylogeographic able but genetically distinct are known as ‘cryptic species’ study of P. coelestis across its distribution using both (Knowlton 2000). In the past decade, DNA sequencing the mtDNA control region and microsatellite loci as has provided an independent means of testing the validity genetic markers and revealed two deeply divergent clades; of existing taxonomic units, revealing cases of inappropriate the first clade was shown to encompass the ‘true’ P. -
Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Assessing the Presence of Chitinases in the Digestive Tract and Their Relationship to Diet and Morphology in Freshwater Fish
Assessing the Presence of Chitinases in the Digestive Tract and their Relationship to Diet and Morphology in Freshwater Fish Word count: 25 157 Andy Vervaet Student number: 01000500 Supervisor: Prof. dr. Ir. Geert Janssens Supervisor: Dr. Arturo Muñoz Saravia A dissertation submitted to Ghent University in partial fulfilment of the requirements for the degree of Master of Veterinary Medicine Academic year: 2018 - 2019 Ghent University, its employees and/or students, give no warranty that the information provided in this thesis is accurate or exhaustive, nor that the content of this thesis will not constitute or result in any infringement of third-party rights. Ghent University, its employees and/or students do not accept any liability or responsibility for any use which may be made of the content or information given in the thesis, nor for any reliance which may be placed on any advice or information provided in this thesis. ACKNOWLEDGEMENTS Writing this work would not have been possible without all the guidance, help and motivation I received during the process. I offer my sincerest gratitude to all the people who played a role in finishing the thesis. First, I would like to thank both my promotors; prof. dr. ir. Geert Janssens and dr. Arturo Muñoz Saravia. For offering me the opportunity to work on this exciting subject and allowing me to get an invaluable experience of learning to work in challenging conditions abroad. Their guidance and expertise on different issues were integral to finishing this work. Secondly, I would like to thank all the people who helped me during certain parts of the study; the people at IDP-Pacu who made their lab facilities for me in Bolivia, Donna Vanhauteghem for helping me to process my samples, and Stefania Magnusdottir and Joanna Wolthuis of UMC Utrecht for performing the data analysis of the DI-MS samples. -
Pomacentridae): Structural and Expression Variation in Opsin Genes
Molecular Ecology (2017) 26, 1323–1342 doi: 10.1111/mec.13968 Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes SARA M. STIEB,*† FABIO CORTESI,*† LORENZ SUEESS,* KAREN L. CARLETON,‡ WALTER SALZBURGER† and N. J. MARSHALL* *Sensory Neurobiology Group, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia, †Zoological Institute, University of Basel, Basel 4051, Switzerland, ‡Department of Biology, The University of Maryland, College Park, MD 20742, USA Abstract Coral reefs belong to the most diverse ecosystems on our planet. The diversity in col- oration and lifestyles of coral reef fishes makes them a particularly promising system to study the role of visual communication and adaptation. Here, we investigated the evolution of visual pigment genes (opsins) in damselfish (Pomacentridae) and exam- ined whether structural and expression variation of opsins can be linked to ecology. Using DNA sequence data of a phylogenetically representative set of 31 damselfish species, we show that all but one visual opsin are evolving under positive selection. In addition, selection on opsin tuning sites, including cases of divergent, parallel, conver- gent and reversed evolution, has been strong throughout the radiation of damselfish, emphasizing the importance of visual tuning for this group. The highest functional variation in opsin protein sequences was observed in the short- followed by the long- wavelength end of the visual spectrum. Comparative gene expression analyses of a subset of the same species revealed that with SWS1, RH2B and RH2A always being expressed, damselfish use an overall short-wavelength shifted expression profile. Inter- estingly, not only did all species express SWS1 – a UV-sensitive opsin – and possess UV-transmitting lenses, most species also feature UV-reflective body parts. -
OSTRACIIDAE Boxfishes by K
click for previous page 3948 Bony Fishes OSTRACIIDAE Boxfishes by K. Matsuura iagnostic characters: Small to medium-sized (to 40 cm) fishes; body almost completely encased Din a bony shell or carapace formed of enlarged, thickened scale plates, usually hexagonal in shape and firmly sutured to one another; no isolated bony plates on caudal peduncle. Carapace triangular, rectangular, or pentangular in cross-section, with openings for mouth, eyes, gill slits, pectoral, dorsal, and anal fins, and for the flexible caudal peduncle. Scale-plates often with surface granulations which are prolonged in some species into prominent carapace spines over eye or along ventrolateral or dorsal angles of body. Mouth small, terminal, with fleshy lips; teeth moderate, conical, usually less than 15 in each jaw. Gill opening a moderately short, vertical to oblique slit in front of pectoral-fin base. Spinous dorsal fin absent; most dorsal-, anal-, and pectoral-fin rays branched; caudal fin with 8 branched rays; pelvic fins absent. Lateral line inconspicuous. Colour: variable, with general ground colours of either brown, grey, or yellow, usually with darker or lighter spots, blotches, lines, and reticulations. carapace no bony plates on caudal peduncle 8 branched caudal-fin rays Habitat, biology, and fisheries: Slow-swimming, benthic-dwelling fishes occurring on rocky and coral reefs and over sand, weed, or sponge-covered bottoms to depths of 100 m. Feed on benthic invertebrates. Taken either by trawl, other types of nets, or traps. Several species considered excellent eating in southern Japan, although some species are reported to have toxic flesh and are also able to secrete a substance when distressed that is highly toxic, both to other fishes and themselves in enclosed areas such as holding tanks. -
Fishes Collected During the 2017 Marinegeo Assessment of Kāne
Journal of the Marine Fishes collected during the 2017 MarineGEO Biological Association of the ā ‘ ‘ ‘ United Kingdom assessment of K ne ohe Bay, O ahu, Hawai i 1 1 1,2 cambridge.org/mbi Lynne R. Parenti , Diane E. Pitassy , Zeehan Jaafar , Kirill Vinnikov3,4,5 , Niamh E. Redmond6 and Kathleen S. Cole1,3 1Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, PO Box 37012, MRC 159, Washington, DC 20013-7012, USA; 2Department of Biological Sciences, National University of Singapore, Original Article Singapore 117543, 14 Science Drive 4, Singapore; 3School of Life Sciences, University of Hawai‘iatMānoa, 2538 McCarthy Mall, Edmondson Hall 216, Honolulu, HI 96822, USA; 4Laboratory of Ecology and Evolutionary Biology of Cite this article: Parenti LR, Pitassy DE, Jaafar Aquatic Organisms, Far Eastern Federal University, 8 Sukhanova St., Vladivostok 690091, Russia; 5Laboratory of Z, Vinnikov K, Redmond NE, Cole KS (2020). 6 Fishes collected during the 2017 MarineGEO Genetics, National Scientific Center of Marine Biology, Vladivostok 690041, Russia and National Museum of assessment of Kāne‘ohe Bay, O‘ahu, Hawai‘i. Natural History, Smithsonian Institution DNA Barcode Network, Smithsonian Institution, PO Box 37012, MRC 183, Journal of the Marine Biological Association of Washington, DC 20013-7012, USA the United Kingdom 100,607–637. https:// doi.org/10.1017/S0025315420000417 Abstract Received: 6 January 2020 We report the results of a survey of the fishes of Kāne‘ohe Bay, O‘ahu, conducted in 2017 as Revised: 23 March 2020 part of the Smithsonian Institution MarineGEO Hawaii bioassessment. We recorded 109 spe- Accepted: 30 April 2020 cies in 43 families. -
Annotated Checklist of the Fish Species (Pisces) of La Réunion, Including a Red List of Threatened and Declining Species
Stuttgarter Beiträge zur Naturkunde A, Neue Serie 2: 1–168; Stuttgart, 30.IV.2009. 1 Annotated checklist of the fish species (Pisces) of La Réunion, including a Red List of threatened and declining species RONALD FR ICKE , THIE rr Y MULOCHAU , PA tr ICK DU R VILLE , PASCALE CHABANE T , Emm ANUEL TESSIE R & YVES LE T OU R NEU R Abstract An annotated checklist of the fish species of La Réunion (southwestern Indian Ocean) comprises a total of 984 species in 164 families (including 16 species which are not native). 65 species (plus 16 introduced) occur in fresh- water, with the Gobiidae as the largest freshwater fish family. 165 species (plus 16 introduced) live in transitional waters. In marine habitats, 965 species (plus two introduced) are found, with the Labridae, Serranidae and Gobiidae being the largest families; 56.7 % of these species live in shallow coral reefs, 33.7 % inside the fringing reef, 28.0 % in shallow rocky reefs, 16.8 % on sand bottoms, 14.0 % in deep reefs, 11.9 % on the reef flat, and 11.1 % in estuaries. 63 species are first records for Réunion. Zoogeographically, 65 % of the fish fauna have a widespread Indo-Pacific distribution, while only 2.6 % are Mascarene endemics, and 0.7 % Réunion endemics. The classification of the following species is changed in the present paper: Anguilla labiata (Peters, 1852) [pre- viously A. bengalensis labiata]; Microphis millepunctatus (Kaup, 1856) [previously M. brachyurus millepunctatus]; Epinephelus oceanicus (Lacepède, 1802) [previously E. fasciatus (non Forsskål in Niebuhr, 1775)]; Ostorhinchus fasciatus (White, 1790) [previously Apogon fasciatus]; Mulloidichthys auriflamma (Forsskål in Niebuhr, 1775) [previously Mulloidichthys vanicolensis (non Valenciennes in Cuvier & Valenciennes, 1831)]; Stegastes luteobrun- neus (Smith, 1960) [previously S. -
University of California, San Diego Global
UNIVERSITY OF CALIFORNIA, SAN DIEGO GLOBAL ASSESSMENT OF THE STATUS OF CORAL REEF HERBIVOROUS FISHES: EVIDENCE FOR FISHING EFFECTS A Thesis submitted in partial satisfaction of the requirements for the degree Master of Science in Biology by Clinton Brook Edwards Committee in charge: Professor Jennifer Smith, Chair Professor Jonathan Shurin, Co-Chair Professor Joshua Kohn Professor Stuart Sandin 2013 The Thesis of Clinton Brook Edwards is approved and it is acceptable in quality and form for publication on microfilm and electronically: _____________________________________________________________________ _____________________________________________________________________ _____________________________________________________________________ Co-Chair _____________________________________________________________________ Chair University of California, San Diego 2013 iii Dedication To my sister Katee, who never had the opportunity to grow old and define new dreams as old ones were reached. I will carry your purple spirit with me wherever I go. To my sister Shannon…nobody makes me more mad or proud!!!! I love you!! To Brandon…..my co-conspirator, brother and best friend. You taught me to be proud of being smart, to be bold in my opinions and to truly love people. Thank you. To Seamus, Nagy, Neil, Pete, Pat, Mikey B and Spence dog. Learning to surf with you guys has been one of the true honors of my life. To the madmen, Ed, Sean, Garth, Pig Dog and Theo. Not sure if thanking you guys is necessarily the most appropriate course of action but I am certain that I would not be here without you guys…. To my parents and Rozy…..this is as much your thesis as it is mine. iv Epigraph No man is an island, Entire of itself. -
Review of the Sharpnose Pufferfishes (Subfamily Canthigasterinae) of the Indo-Pacific
AUSTRALIAN MUSEUM SCIENTIFIC PUBLICATIONS Allen, Gerald R., and J. E. Randall, 1977. Review of the sharpnose pufferfishes (Subfamily Canthigasterinae) of the Indo-Pacific. Records of the Australian Museum 30(17): 475–517. [31 December 1977]. doi:10.3853/j.0067-1975.30.1977.192 ISSN 0067-1975 Published by the Australian Museum, Sydney naturenature cultureculture discover discover AustralianAustralian Museum Museum science science is is freely freely accessible accessible online online at at www.australianmuseum.net.au/publications/www.australianmuseum.net.au/publications/ 66 CollegeCollege Street,Street, SydneySydney NSWNSW 2010,2010, AustraliaAustralia REVIEW OF THE SHARPNOSE PUFFERFISHES (SUBFAMILY CANTHIGASTERINAE) OF THE INDO-PAClFIC GERALD R. ALLEN Department of Fishes, Western Australian Museum, Perth and JOHN E. RANDALL Fish Division, Bernice P. Bishop Museum, Honolulu SUMMARY Twenty-two species of Canthigaster (Tetraodontidae; Canthigasterinae), including seven which are described as new, are recognized from the tropical Indo-Pacific: C. amboinensis (widespread Indo-Pacific), C. bennetti (widespread Indo-W. Pacific), C. callisterna (New South Wales; Lord Howe, Norfolk, and Kermadec islands; northern New Zealand), C. compressa (E. Indies; Melanesia; Philippine Islands), C. coronata (widespread Indo-W. Pacific), C. epilampra (W. Pacific), C. inframacula n. sp. (Hawaiian Islands), C. investigatoris (Andaman Islands), C. jactator (Hawaiian Islands), C. janthinoptera (widespread Indo-W. Pacific), C. margaritata (Red Sea), C. marquesensis n. sp. (Marquesas Islands), C. nata/ensis (Mauritius; South Africa), C. ocellicincta n. sp. (Melanesia; Great Barrier Reef), C. punctatissima (eastern Pacific), C. pygmaea n. sp. (Red Sea), C. rapaensis n. sp. (Rapa), C. rivulata (widespread Indo-W. Pacific), C. smithae n.sp. (Mauritius, and South Africa), C. -
Co-Occurrence of Tetrodotoxin and Saxitoxins and Their Intra-Body Distribution in the Pufferfish Canthigaster Valentini
toxins Article Co-Occurrence of Tetrodotoxin and Saxitoxins and Their Intra-Body Distribution in the Pufferfish Canthigaster valentini Hongchen Zhu 1, Takayuki Sonoyama 2, Misako Yamada 1, Wei Gao 1, Ryohei Tatsuno 3, Tomohiro Takatani 1 and Osamu Arakawa 1,* 1 Graduate School of Fisheries and Environmental Sciences, Nagasaki University. 1-14, Bunkyo-machi, Nagasaki, Nagasaki 852-8521, Japan; [email protected] (H.Z.); [email protected] (M.Y.); [email protected] (W.G.); [email protected] (T.T.) 2 Shimonoseki Marine Science Museum. 6-1, Arcaport, Shimonoseki, Yamaguchi 750-0036, Japan; [email protected] 3 Department of Food Science and Technology, National Fisheries University, Japan Fisheries Research and Education Agency. 2-7-1, Nagatahonmachi, Shimonoseki, Yamaguchi 759-6595, Japan; tatsuno@fish-u.ac.jp * Correspondence: [email protected]; Tel.: +81-95-819-2844 Received: 9 June 2020; Accepted: 2 July 2020; Published: 3 July 2020 Abstract: Pufferfish of the family Tetraodontidae possess tetrodotoxin (TTX) and/or saxitoxins (STXs), but the toxin ratio differs, depending on the genus or species. In the present study, to clarify the distribution profile of TTX and STXs in Tetraodontidae, we investigated the composition and intra-body distribution of the toxins in Canthigaster valentini. C. valentini specimens (four male and six female) were collected from Amami-Oshima Island, Kagoshima Prefecture, Japan, and the toxins were extracted from the muscle, liver, intestine, gallbladder, gonads, and skin. Analysis of the extracts for TTX by liquid chromatography tandem mass spectrometry and of STXs by high-performance liquid chromatography with post-column fluorescence derivatization revealed TTX, as well as a large amount of STXs, with neoSTX as the main component and dicarbamoylSTX and STX itself as minor components, in the skin and ovary. -
Pacific Reef Assessment and Monitoring Program Data Report
Pacific Reef Assessment and Monitoring Program Data Report Ecological monitoring 2012–2013—reef fishes and benthic habitats of the main Hawaiian Islands, American Samoa, and Pacific Remote Island Areas A. Heenan1, P. Ayotte1, A. Gray1, K. Lino1, K. McCoy1, J. Zamzow1, and I. Williams2 1 Joint Institute for Marine and Atmospheric Research University of Hawaii at Manoa 1000 Pope Road Honolulu, HI 96822 2 Pacific Islands Fisheries Science Center National Marine Fisheries Service NOAA Inouye Regional Center 1845 Wasp Boulevard, Building 176 Honolulu, HI 96818 ______________________________________________________________ NOAA Pacific Islands Fisheries Science Center PIFSC Data Report DR-14-003 Issued 1 April 2014 This report outlines some of the coral reef monitoring surveys conducted by the National Oceanic and Atmospheric Administration (NOAA) Pacific Islands Fisheries Science Center’s Coral Reef Ecosystem Division in 2012 and 2013. This includes the following regions: American Samoa, the main Hawaiian Islands and the Pacific Remote Island Areas. 2 Acknowledgements Thanks to all those onboard the NOAA ships Hi`ialakai and Oscar Elton Sette for their logistical and field support during the 2012-2013 Pacific Reef Assessment and Monitoring Program (Pacific RAMP) research cruises and to the following divers for their assistance with data collection; Senifa Annandale, Jake Asher, Marie Ferguson, Jonatha Giddens, Louise Giuseffi, Mark Manuel, Marc Nadon, Hailey Ramey, Ben Richards, Brett Schumacher, Kosta Stamoulis and Darla White. We thank Rusty Brainard for his tireless support of Pacific RAMP and the staff of NOAA PIFSC CRED for assistance in the field and data management. This work was funded by the NOAA Coral Reef Conservation Program and the Pacific Islands Fisheries Science Center.