Community Planning and Economic Development Creating Solutions for Our Future Joshua Cummings, Director
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Cyclotides Evolve
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 218 Cyclotides evolve Studies on their natural distribution, structural diversity, and activity SUNGKYU PARK ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6192 ISBN 978-91-554-9604-3 UPPSALA urn:nbn:se:uu:diva-292668 2016 Dissertation presented at Uppsala University to be publicly examined in B/C4:301, BMC, Husargatan 3, Uppsala, Friday, 10 June 2016 at 09:00 for the degree of Doctor of Philosophy (Faculty of Pharmacy). The examination will be conducted in English. Faculty examiner: Professor Mohamed Marahiel (Philipps-Universität Marburg). Abstract Park, S. 2016. Cyclotides evolve. Studies on their natural distribution, structural diversity, and activity. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 218. 71 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-554-9604-3. The cyclotides are a family of naturally occurring peptides characterized by cyclic cystine knot (CCK) structural motif, which comprises a cyclic head-to-tail backbone featuring six conserved cysteine residues that form three disulfide bonds. This unique structural motif makes cyclotides exceptionally resistant to chemical, thermal and enzymatic degradation. They also exhibit a wide range of biological activities including insecticidal, cytotoxic, anti-HIV and antimicrobial effects. The cyclotides found in plants exhibit considerable sequence and structural diversity, which can be linked to their evolutionary history and that of their host plants. To clarify the evolutionary link between sequence diversity and the distribution of individual cyclotides across the genus Viola, selected known cyclotides were classified using signature sequences within their precursor proteins. By mapping the classified sequences onto the phylogenetic system of Viola, we traced the flow of cyclotide genes over evolutionary history and were able to estimate the prevalence of cyclotides in this genus. -
Producción De Forraje Y Competencia Interespecífica Del Cultivo Asociado De Avena (Avena Sativa) Con Vicia (Vicia Sativa) En Condiciones De Secano Y Gran Altitud
Rev Inv Vet Perú 2018; 29(4): 1237-1248 http://dx.doi.org/10.15381/rivep.v29i4.15202 Producción de forraje y competencia interespecífica del cultivo asociado de avena (Avena sativa) con vicia (Vicia sativa) en condiciones de secano y gran altitud Forage production and interspecific competition of oats (Avena sativa) and common vetch (Vicia sativa) association under dry land and high-altitude conditions Francisco Espinoza-Montes1,2,4, Wilfredo Nuñez-Rojas1, Iraida Ortiz-Guizado3, David Choque-Quispe2 RESUMEN Se experimentó el cultivo asociado de avena (Avena sativa) y vicia común (Vicia sativa) en condiciones de secano, a 4035 m sobre el nivel del mar, para conocer su comportamiento y efectos en el rendimiento, calidad de forraje y competencia interespecífica. En promedio, el rendimiento de forraje verde, materia seca y calidad de forraje fueron superiores al del monocultivo de avena (p<0.05). El porcentaje de proteína cruda se incrementó en la medida que creció la proporción de vicia común en la asocia- ción, acompañado de una disminución del contenido de fibra. En cuanto a los índices de competencia, el cultivo asociado de avena con vicia favorece el rendimiento relativo total de forraje (LERtotal>1). Ninguna de las especies manifestó comportamiento agresivo (A=0). Se observó mayor capacidad competitiva de la vicia común (CR>1) comparado con la capacidad competitiva de la avena. Palabras clave: cultivo asociado; rendimiento; calidad de forraje; competencia interespecífica ABSTRACT The oats (Avena sativa) and common vetch (Vicia sativa) cultivated in association was evaluated under dry land conditions at 4035 m above sea level to determine its performance and effects on yield, forage quality and interspecific competition. -
Final Report on Valley Silverspot Butterfly (Speyeria Zerene Bremnerii) Surveys in the Suislaw National Forest and Salem District BLM
Final report on Valley silverspot butterfly (Speyeria zerene bremnerii) surveys in the Suislaw National Forest and Salem District BLM Assistance agreement L08AC13768, Modification 7 Mill Creek proposed ACEC, Polk County, OR. Photo by Alexa Carleton Field work, background research, and report completed by Alexa Carleton, Candace Fallon, and Sarah Foltz Jordan, The Xerces Society for Invertebrate Conservation October 30, 2012 Table of Contents Summary ….…………………………………………………………………………………………………………………………..…. 3 Introduction …….………………………………………………………………………………………….…………………….….… 3 Survey protocol …….………..…………………………………………………………………………………………………….… 4 Sites surveyed and survey results …..…….…………………………………………………………………………….…… 6 Northern Polk County sites (July 23) …………………………………………………………………………….. 6 Northern Benton County sites (July 24) ………………………………………………………………….….… 8 Southern Polk County sites (July 31) ………………………………………………………………………….. 11 Yamhill County sites (August 7)…………………………………………………………………………………… 12 Southern Benton County sites (August 12) ……………………………………………………………….… 13 Mary’s Peak, Benton County (August 15) ……………………………………………………….………..… 15 Potential future survey work…………….……………………………………………………………………………………. 20 Acknowledgments …………………………………………………………………………………………………………………. 22 References .…………….……………………………………………………………………………………………………………… 22 Appendix I: Historic records of S. z. bremnerii in Oregon………………………………………………………... 23 Appendix II: Summary table of sites surveyed …….…………………………………………………………………. 27 Appendix III: Maps of sites surveyed ………………………………………………………..………………………….… -
Davis Expedition Fund Report on Expedition / Project
DAVIS EXPEDITION FUND REPORT ON EXPEDITION / PROJECT Expedition/Project Title: Biogeography and Systematics of South American Vicia (Leguminosae) Travel Dates: 28/09/2010 – 12/11/2010 Location: Northern Chile and northern Argentina Group Members: Paulina Hechenleitner Collection of research material of Vicia in the form of Aims: herbarium specimens, habitat data, digital images, silica- dried leaf samples, and base-line data on the IUCN conservation status of Vicia. Outcome (not less than 300 words):- See attached report. Report for the Davis Expedition Fund Biogeography and Systematics of South American Vicia (Leguminosae) Botanical fieldwork to northern Chile and northern Argentina 28th of Sep to 12th of November 2010 Paulina Hechenleitner January 2011 Introduction Vicia is one of five genera in tribe Fabeae, and contains some of humanity's oldest crop plants, and is thus of great economic importance. The genus contains around 160 spp. (Lewis et al. 2005) distributed throughout temperate regions of the northern hemisphere and in temperate S America. Its main centre of diversity is the Mediterranean with smaller centres in North and South America (Kupicha, 1976). The South American species are least known taxonomically. Vicia, together with Lathyrus and a number of other temperate plant genera share an anti- tropical disjunct distribution. This biogeographical pattern is intriguing (Raven, 1963): were the tropics bridged by long distance dispersal between the temperate regions of the hemispheres, or were once continuous distributions through the tropics severed in a vicariance event? Do the similar patterns seen in other genera reflect similar scenarios or does the anti-tropical distribution arise in many different ways? The parallels in distribution, species numbers and ecology between Lathyrus and Vicia are particularly striking. -
Mardon Skipper Site Management Plans
Mardon Skipper (Polites mardon) Site Management Plans Gifford Pinchot National Forest Service Cowlitz Valley Ranger District Prepared by John Jakubowski North Zone Wildlife Biologist Reviewed by Rich Hatfield, The Xerces Society for Invertebrate Conservation October 2, 2015 Cowlitz Valley Ranger District Mardon Skipper Sites Group Meadow Longitude Latitude Area (acres) Elevation (ft.) Midway Midway 121 32.0 46 21.2 8 4,313 Midway PCT 121 31.1 46 21.1 2 4,530 Midway 115 Spur 121 30.9 46 21.0 3 4,494 Midway Grapefern 121 30.9 46 21.5 3 4,722 Midway 7A North 121 31.4 46 21.5 2 4,657 Midway 7A South 121 31.5 46 21.4 2 4,625 Midway 7A 121 31.1 46 21.4 7 4,676 Muddy Muddy 121 32.2 46.18.5 4 4,450 Muddy Lupine 121 31.8 46 18.7 3 4,398 Spring Cr Spring Cr. 121 33.5 46 20.4 unknown 3,900 Goal of the Management Plans Maintain and improve grassland/forb habitat at known occupancy meadow sites to ensure continued occupancy by mardon skipper butterfly as well as other important pollinator species such as western bumble bee. 1 Introduction On the Gifford Pinchot National Forest (GPNF), mardon skippers were first detected on the Mt. Adams Ranger District (MTA) in 2000 and on Cowlitz Valley Ranger District (CVRD) in 2002. Mardon skippers are known to inhabit ten, upland dry grassy meadows on the CVRD. Portions of the meadows are mesic and are unsuitable mardon skipper habitat. -
Prairie Lupine (Lupinus Lepidus) Is a Perennial Herb That Grows 20-45 Cm Tall
COSEWIC Assessment and Update Status Report on the Prairie Lupine Lupinus lepidus in Canada ENDANGERED 2009 COSEWIC status reports are working documents used in assigning the status of wildlife species suspected of being at risk. This report may be cited as follows: COSEWIC. 2009. COSEWIC assessment and update status report on the Prairie Lupine Lupinus lepidus in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. vi + 34 pp. (www.sararegistry.gc.ca/status/status_e.cfm). Previous reports: COSEWIC 2000. COSEWIC assessment and status on the Prairie Lupine Lupinus lepidus var. lepidus in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. vi + 18 pp. (www.sararegistry.gc.ca/status/status_e.cfm) Ryan, M., and G.W. Douglas. 1996. COSEWIC status report on the Prairie Lupine Lupinus lepidus var. lepidus in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. 1-18 pp. Production note: COSEWIC acknowledges Carrina Maslovat for writing the update status report on Prairie Lupine, Lupinis lepidus in Canada, prepared under contract with Environment Canada, overseen and edited by Erich Haber, Co-chair, COSEWIC Vascular Plants Specialist Subcommittee For additional copies contact: COSEWIC Secretariat c/o Canadian Wildlife Service Environment Canada Ottawa, ON K1A 0H3 Tel.: 819-953-3215 Fax: 819-994-3684 E-mail: COSEWIC/[email protected] http://www.cosewic.gc.ca Également disponible en français sous le titre Ếvaluation et Rapport de situation du COSEPAC sur le lupin élégant (Lupinus lepidus) au Canada – Mise à jour. Cover photo: Prairie Lupine — used with permission from H. Roemer. ©Her Majesty the Queen in Right of Canada, 2009. -
Overview of Vicia (Fabaceae) of Mexico
24 LUNDELLIA DECEMBER, 2014 OVERVIEW OF VICIA (FABACEAE) OF MEXICO Billie L. Turner Plant Resources Center, The University of Texas, 110 Inner Campus Drive, Stop F0404, Austin TX 78712-1711 [email protected] Abstract: Vicia has 12 species in Mexico; 4 of the 12 are introduced. Two new names are proposed: Vicia mullerana B.L. Turner, nom. & stat. nov., (based on V. americana subsp. mexicana C.R. Gunn, non V. mexicana Hemsl.), and V. ludoviciana var. occidentalis (Shinners) B.L. Turner, based on V. occidentalis Shinners, comb. nov. Vicia pulchella Kunth subsp. mexicana (Hemsley) C.R. Gunn is better treated as V. sessei G. Don, the earliest name at the specific level. A key to the taxa is provided along with comments upon species relationships, and maps showing distributions. Keywords: Vicia, V. americana, V. ludoviciana, V. pulchella, V. sessei, Mexico. Vicia, with about 140 species, is widely (1979) provided an exceptional treatment distributed in temperate regions of both of the Mexican taxa, nearly all of which were hemispheres (Kupicha, 1982). Some of the illustrated by full-page line sketches. As species are important silage, pasture, and treated by Gunn, eight species are native to green-manure legumes. Introduced species Mexico and four are introduced. I largely such as V. faba, V. hirsuta, V. villosa, and follow Gunn’s treatment, but a few of his V. sativa are grown as winter annuals in subspecies have been elevated to specific Mexico, but are rarely collected. Gunn rank, or else treated as varieties. KEY TO THE SPECIES OF VICIA IN MEXICO (largely adapted from Gunn, 1979) 1. -
Yorkhill Green Spaces Wildlife Species List
Yorkhill Green Spaces Wildlife Species List April 2021 update Yorkhill Green Spaces Species list Draft list of animals, plants, fungi, mosses and lichens recorded from Yorkhill, Glasgow. Main sites: Yorkhill Park, Overnewton Park and Kelvinhaugh Park (AKA Cherry Park). Other recorded sites: bank of River Kelvin at Bunhouse Rd/ Old Dumbarton Rd, Clyde Expressway path, casual records from streets and gardens in Yorkhill. Species total: 711 Vertebrates: Amhibians:1, Birds: 57, Fish: 7, Mammals (wild): 15 Invertebrates: Amphipods: 1, Ants: 3, Bees: 26, Beetles: 21, Butterflies: 11, Caddisflies: 2, Centipedes: 3, Earthworms: 2, Earwig: 1, Flatworms: 1, Flies: 61, Grasshoppers: 1, Harvestmen: 2, Lacewings: 2, Mayflies: 2, Mites: 4, Millipedes: 3, Moths: 149, True bugs: 13, Slugs & snails: 21, Spiders: 14, Springtails: 2, Wasps: 13, Woodlice: 5 Plants: Flowering plants: 174, Ferns: 5, Grasses: 13, Horsetail: 1, Liverworts: 7, Mosses:17, Trees: 19 Fungi and lichens: Fungi: 24, Lichens: 10 Conservation Status: NameSBL - Scottish Biodiversity List Priority Species Birds of Conservation Concern - Red List, Amber List Last Common name Species Taxon Record Common toad Bufo bufo amphiban 2012 Australian landhopper Arcitalitrus dorrieni amphipod 2021 Black garden ant Lasius niger ant 2020 Red ant Myrmica rubra ant 2021 Red ant Myrmica ruginodis ant 2014 Buff-tailed bumblebee Bombus terrestris bee 2021 Garden bumblebee Bombus hortorum bee 2020 Tree bumblebee Bombus hypnorum bee 2021 Heath bumblebee Bombus jonellus bee 2020 Red-tailed bumblebee Bombus -
Chapter17 Appendixiii Species List.Pub
Appendix 3: Species List English Latin French PLANTS Acadian quillwort Isoetes acadiensis Isoète acadien Alder Alnus sp. Aulne Alpine bilberry (bog blueberry) Vaccinium uliginosum Airelle des marécages Alternate-leaved dogwood Cornus alternifolia Cornouiller à feuilles alternes American mountain-ash Sorbus americana Sorbier d’Amérique (cormier) American red currant Ribes triste Gadellier amer Arctic sweet coltsfoot Petasites frigidus Pétasite palmé (pétasite hybride) Arrow-grass Triglochin sp. Troscart Ash Fraxinus sp. Frêne Aspen Populus sp. Tremble Atlantic manna grass Glyceria obtusa Glycérie Awlwort Subularia aquatica Subulaire aquatique Back’s sedge Carex backii Carex de Back Bake-apple (cloudberry) Rubus chamaemorus Ronce petit-mûrier (mûres blanches) Balsam fir Abies balsamea Sapin baumier Balsam poplar Populus balsamifera Peuplier baumier (liard) Basswood (American linden) Tilia americana Tilleul d’Amérique (bois blanc) Bathurst saltmarsh aster Aster subulatus var. obtusifolius Aster subulé Beaked hazelnut Corylus cornuta Noisetier à long bec Beech (American beech) Fagus grandifolia Hêtre à grandes feuilles (hêtre américain) Bigelow’s sedge Carex bigelowii Carex de Bigelow Birch Betula sp. Bouleau Black ash Fraxinus nigra Frêne noir Black cherry Prunus serotina Cerisier Tardif Black crowberry Empetrum nigrum Camarine noire (Graines à corbigeaux) Black grass Juncus gerardii Jonc de Gérard Black spruce Picea mariana Épinette noire Black willow Salix nigra Saule noir Bloodroot Sanguinaria canadensis Sanguinaire du Canada (sang-dragon) -
Alaska LNG Environmental Impact Statement
APPENDIX P Special Status Species Lists APPENDIX P: Special Status Species Lists Table of Contents Table P-1 Bureau of Land Management (BLM) Sensitive and Watch List Species Associated with the Mainline Facilities ............................................................................................ P-1 Table P-2 Alaska Species of Greatest Conservation Need ............................................................ P-11 TABLE P-1 Bureau of Land Management (BLM) Sensitive and Watch List Species Associated with the Mainline Facilities Species a BLM Status Description Alaska Region b Habitat Birds Aleutian tern Sensitive Medium-sized tern; underparts are Restricted to coastal areas throughout the Breeding habitat includes vegetated (Onychoprion aleuticus) white, crown and mantle speckled white, Aleutian Islands, north to the southeastern islands, shrub-tundra, grass and and tail gray with white sides; Chukchi Sea and east to the Alaska Peninsula, sedge meadows, and freshwater differentiated from similar species by Yakutat, and Glacier Bay; most of the Alaska marshes; habitat during migration is dark bar on secondaries. population is concentrated in the Gulf of pelagic Alaska American golden plover Watch List Stocky, medium-sized shorebird with a Breeds through north and central Alaska, Nests on grassy tundra preferring dry (Pluvialis dominica) short bill; breeding males have a white including Seward Peninsula, then south along upland areas; nest in sparse lower crown stripe extending down the side of Norton Sound to Cape Romanzof. -
UC Berkeley UC Berkeley Electronic Theses and Dissertations
UC Berkeley UC Berkeley Electronic Theses and Dissertations Title Disturbance Macroecology: An Information Entropy Approach for Cross-System Comparisons of Ecosystems in Transition Permalink https://escholarship.org/uc/item/7rd5d4hv Author Newman, Erica A. Publication Date 2016 Peer reviewed|Thesis/dissertation eScholarship.org Powered by the California Digital Library University of California Disturbance Macroecology: An Information Entropy Approach for Cross-System Comparisons of Ecosystems in Transition by Erica Anna Newman A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in the Energy and Resources Group in the Graduate Division of the University of California, Berkeley Committee in charge: Professor John Harte, Co-Chair Professor Max Alan Moritz, Co-Chair Professor Steven R. Beissinger Professor Scott L. Stephens Spring 2016 Abstract Disturbance Macroecology: An Information Entropy Approach for Cross-System Comparisons of Ecosystems in Transition by Erica Anna Newman Doctor of Philosophy in Energy and Resources University of California, Berkeley Professor John Harte, Co-Chair Professor Max Alan Moritz, Co-Chair Little is known about how metrics of biodiversity and abundance scale in ecologically disturbed and disrupted systems. Natural disturbances have a fundamental role in structuring ecological communities, and the study of these processes and extension to novel ecological disruptions is of increasing importance due to global change and mounting human impacts. Numerous studies have demonstrated the importance of natural disturbance in determining basic ecological properties of an ecosystem, including species diversity, membership, and relative abundances of those species, as well as overall productivity. Although estimating ecological metrics at both the species and community level is of critical importance to conservation goals, predicting the impacts of disturbance and disruption, including anthropogenic changes, on ecosystems is a major problem for ecological theory for several reasons. -
W a Sh in G to N Na Tu Ra L H Er Itag E Pr Og Ra M
PROGRAM HERITAGE NATURAL Conservation Status Ranks of Washington’s Ecological Systems Prepared for Washington Dept. of Fish and WASHINGTON Wildlife Prepared by F. Joseph Rocchio and Rex. C. Crawford August 04, 2015 Natural Heritage Report 2015-03 Conservation Status Ranks for Washington’s Ecological Systems Washington Natural Heritage Program Report Number: 2015-03 August 04, 2015 Prepared by: F. Joseph Rocchio and Rex C. Crawford Washington Natural Heritage Program Washington Department of Natural Resources Olympia, Washington 98504-7014 .ON THE COVER: (clockwise from top left) Crab Creek (Inter-Mountain Basins Big Sagebrush Steppe and Columbia Basin Foothill Riparian Woodland and Shrubland Ecological Systems); Ebey’s Landing Bluff Trail (North Pacific Herbaceous Bald and Bluff Ecological System and Temperate Pacific Tidal Salt and Brackish Marsh Ecological Systems); and Judy’s Tamarack Park (Northern Rocky Mountain Western Larch Savanna). Photographs by: Joe Rocchio Table of Contents Page Table of Contents ............................................................................................................................ ii Tables ............................................................................................................................................. iii Introduction ..................................................................................................................................... 4 Methods..........................................................................................................................................