Mitochondria Targeting As an Effective Strategy for Cancer Therapy
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www.nature.com/scientificreports OPEN Potent antitumor activity of a glutamyltransferase‑derived peptide via an activation of oncosis pathway Cheng Fang1,7, Wenhui Li2,7, Ruozhe Yin3,7, Donglie Zhu3, Xing Liu4, Huihui Wu4, Qingqiang Wang3, Wenwen Wang4, Quan Bai5, Biliang Chen6, Xuebiao Yao4* & Yong Chen3* Hepatocellular carcinoma (HCC) still presents poor prognosis with high mortality rate, despite of the improvement in the management. The challenge for precision treatment was due to the fact that little targeted therapeutics are available for HCC. Recent studies show that metabolic and circulating peptides serve as endogenous switches for correcting aberrant cellular plasticity. Here we explored the antitumor activity of low molecular components in human umbilical serum and identifed a high abundance peptide VI‑13 by peptidome analysis, which was recognized as the part of glutamyltransferase signal peptide. We modifed VI‑13 by inserting four arginines and obtained an analog peptide VI‑17 to improve its solubility. Our analyses showed that the peptide VI‑17 induced rapid context‑dependent cell death, and exhibited a higher sensitivity on hepatoma cells, which is attenuated by polyethylene glycol but not necrotic inhibitors such as z‑VAD‑fmk or necrostatin‑1. Morphologically, VI‑17 induced cell swelling, blebbing and membrane rupture with release of cellular ATP and LDH into extracellular media, which is hallmark of oncotic process. Mechanistically, VI‑17 induced cell membrane pore formation, degradation of α‑tubulin via infux of calcium ion. These results indicated that the novel peptide VI‑17 induced oncosis in HCC cells, which could serve as a promising lead for development of therapeutic intervention of HCC. -
Ftsh Is Required for Proteolytic Elimination of Uncomplexed Forms
Proc. Natl. Acad. Sci. USA Vol. 92, pp. 4532-4536, May 1995 Cell Biology FtsH is required for proteolytic elimination of uncomplexed forms of SecY, an essential protein translocase subunit (protein translocation/quality control/proteolysis/AAA family/membrane protein) AKIO KIHARA, YOSHINORI AKIYAMA, AND KOREAKI ITO Department of Cell Biology, Institute for Virus Research, Kyoto University, Kyoto 606-01, Japan Communicated by Randy Schekman, University of California, Berkeley, CA, February 13, 1995 (receivedfor review December 5, 1994) ABSTRACT When secY is overexpressed over secE or secE Overexpression of SecY from a plasmid does not lead to is underexpressed, a fraction of SecY protein is rapidly significant overaccumulation of SecY (2, 12). Under such degraded in vivo. This proteolysis was unaffected in previously conditions, the majority of SecY is degraded with a half-life of described protease-defective mutants examined. We found, about 2 min, whereas the other fraction that corresponds to the however, that some mutations inftsH, encoding a membrane amount seen in the wild-type cell remains stable (2). When protein that belongs to the AAA (ATPase associated with a SecE is co-overproduced, oversynthesized SecY is stabilized variety ofcellular activities) family, stabilized oversynthesized completely (2, 12). Mutational reduction of the quantity of SecY. This stabilization was due to a loss ofFtsH function, and SecE is accompanied by destabilization of the corresponding overproduction of the wild-type FtsH protein accelerated the fraction of newly synthesized SecY molecules (2). These degradation. The ftsH mutations also suppressed, by allevi- observations indicate that uncomplexed SecY is recognized ating proteolysis of an altered form of SecY, the temperature and hydrolyzed by a protease and that SecE can antagonize the sensitivity of the secY24 mutation, which alters SecY such that proteolysis. -
Mitochondrial Metabolism and Cancer
Cell Research (2018) 28:265-280. REVIEW www.nature.com/cr Mitochondrial metabolism and cancer Paolo Ettore Porporato1, *, Nicoletta Filigheddu2, *, José Manuel Bravo-San Pedro3, 4, 5, 6, 7, Guido Kroemer3, 4, 5, 6, 7, 8, 9, Lorenzo Galluzzi3, 10, 11 1Department of Molecular Biotechnology and Health Sciences, Molecular Biotechnology Center, 10124 Torino, Italy; 2Department of Translational Medicine, University of Piemonte Orientale, 28100 Novara, Italy; 3Université Paris Descartes/Paris V, Sorbonne Paris Cité, 75006 Paris, France; 4Université Pierre et Marie Curie/Paris VI, 75006 Paris, France; 5Equipe 11 labellisée par la Ligue contre le Cancer, Centre de Recherche des Cordeliers, 75006 Paris, France; 6INSERM, U1138, 75006 Paris, France; 7Meta- bolomics and Cell Biology Platforms, Gustave Roussy Comprehensive Cancer Institute, 94805 Villejuif, France; 8Pôle de Biologie, Hopitâl Européen George Pompidou, AP-HP, 75015 Paris, France; 9Department of Women’s and Children’s Health, Karolinska University Hospital, 17176 Stockholm, Sweden; 10Department of Radiation Oncology, Weill Cornell Medical College, New York, NY 10065, USA; 11Sandra and Edward Meyer Cancer Center, New York, NY 10065, USA Glycolysis has long been considered as the major metabolic process for energy production and anabolic growth in cancer cells. Although such a view has been instrumental for the development of powerful imaging tools that are still used in the clinics, it is now clear that mitochondria play a key role in oncogenesis. Besides exerting central bioen- ergetic functions, mitochondria provide indeed building blocks for tumor anabolism, control redox and calcium ho- meostasis, participate in transcriptional regulation, and govern cell death. Thus, mitochondria constitute promising targets for the development of novel anticancer agents. -
Cancer and Mitochondrial Function Revista De La Facultad De Medicina, Vol
Revista de la Facultad de Medicina ISSN: 2357-3848 ISSN: 0120-0011 Universidad Nacional de Colombia Freyre-Bernal, Sofía Isabel; Saavedra-Torres, Jhan Sebastian; Zúñiga-Cerón, Luisa Fernanda; Díaz-Córdoba, Wilmer Jair; Pinzón-Fernández, María Virginia Cancer and mitochondrial function Revista de la Facultad de Medicina, vol. 66, no. 1, 2018, January-March, pp. 83-86 Universidad Nacional de Colombia DOI: 10.15446/revfacmed.v66n1.59898 Available in: http://www.redalyc.org/articulo.oa?id=576364217013 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Journal's webpage in redalyc.org Portugal Project academic non-profit, developed under the open access initiative Rev. Fac. Med. 2017 Vol. 66 No. 1: 83-6 83 ARTÍCULO DE REFLEXIÓN DOI: http://dx.doi.org/10.15446/revfacmed.v66n1.59898 Cancer and mitochondrial function El cáncer en la función mitocondrial Recibido: 3/9/2016. Aceptado: 28/10/2016. Sofía Isabel Freyre-Bernal1 • Jhan Sebastian Saavedra-Torres2,3 • Luisa Fernanda Zúñiga-Cerón2,3 • Wilmer Jair Díaz-Córdoba2,3 • María Virginia Pinzón-Fernández4 1 Universidad del Cauca - Faculty of Health Sciences - Department of Physiological Sciences - Popayán - Colombia. 2 Corporación Del Laboratorio al Campo - Research Seedling Unit - Popayán - Colombia. 3 Universidad del Cauca - Faculty of Health Sciences - Health Research Group - Popayán - Colombia. 4 Universidad del Cauca - Faculty of Health Sciences - Internal Medicine Department - Popayán - Colombia. Corresponding author: Jhan Sebastian Saavedra-Torres. Health Research Group, Faculty of Health Sciences, Universidad del Cauca. Colombia, Cauca. Carrera 6 Nº 13N-50 de Popayán, sector de La Estancia. -
Mice Carrying a Human GLUD2 Gene Recapitulate Aspects of Human Transcriptome and Metabolome Development
Mice carrying a human GLUD2 gene recapitulate aspects of human transcriptome and metabolome development Qian Lia,b,1, Song Guoa,1, Xi Jianga, Jaroslaw Brykc,2, Ronald Naumannd, Wolfgang Enardc,3, Masaru Tomitae, Masahiro Sugimotoe, Philipp Khaitovicha,c,f,4, and Svante Pääboc,4 aChinese Academy of Sciences Key Laboratory of Computational Biology, Chinese Academy of Sciences-Max Planck Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 200031 Shanghai, China; bUniversity of Chinese Academy of Sciences, 100049 Beijing, China; cMax Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany; dMax Planck Institute of Molecular Cell Biology and Genetics, D-01307 Dresden, Germany; eInstitute for Advanced Biosciences, Keio University, 997-0035 Tsuruoka, Yamagata, Japan; and fSkolkovo Institute for Science and Technology, 143025 Skolkovo, Russia Edited by Joshua M. Akey, University of Washington, Seattle, WA, and accepted by the Editorial Board April 1, 2016 (received for review September 28, 2015) Whereas all mammals have one glutamate dehydrogenase gene metabolic flux from glucose and glutamine to lipids by way of the (GLUD1), humans and apes carry an additional gene (GLUD2), TCA cycle (12). which encodes an enzyme with distinct biochemical properties. To investigate the physiological role the GLUD2 gene may We inserted a bacterial artificial chromosome containing the human play in human and ape brains, we generated mice transgenic for GLUD2. GLUD2 gene into mice and analyzed the resulting changes in the a genomic region containing human We compared effects transcriptome and metabolome during postnatal brain development. on gene expression and metabolism during postnatal development Effects were most pronounced early postnatally, and predominantly of the frontal cortex of the brain in these mice and their wild-type genes involved in neuronal development were affected. -
Citric Acid Cycle
CHEM464 / Medh, J.D. The Citric Acid Cycle Citric Acid Cycle: Central Role in Catabolism • Stage II of catabolism involves the conversion of carbohydrates, fats and aminoacids into acetylCoA • In aerobic organisms, citric acid cycle makes up the final stage of catabolism when acetyl CoA is completely oxidized to CO2. • Also called Krebs cycle or tricarboxylic acid (TCA) cycle. • It is a central integrative pathway that harvests chemical energy from biological fuel in the form of electrons in NADH and FADH2 (oxidation is loss of electrons). • NADH and FADH2 transfer electrons via the electron transport chain to final electron acceptor, O2, to form H2O. Entry of Pyruvate into the TCA cycle • Pyruvate is formed in the cytosol as a product of glycolysis • For entry into the TCA cycle, it has to be converted to Acetyl CoA. • Oxidation of pyruvate to acetyl CoA is catalyzed by the pyruvate dehydrogenase complex in the mitochondria • Mitochondria consist of inner and outer membranes and the matrix • Enzymes of the PDH complex and the TCA cycle (except succinate dehydrogenase) are in the matrix • Pyruvate translocase is an antiporter present in the inner mitochondrial membrane that allows entry of a molecule of pyruvate in exchange for a hydroxide ion. 1 CHEM464 / Medh, J.D. The Citric Acid Cycle The Pyruvate Dehydrogenase (PDH) complex • The PDH complex consists of 3 enzymes. They are: pyruvate dehydrogenase (E1), Dihydrolipoyl transacetylase (E2) and dihydrolipoyl dehydrogenase (E3). • It has 5 cofactors: CoASH, NAD+, lipoamide, TPP and FAD. CoASH and NAD+ participate stoichiometrically in the reaction, the other 3 cofactors have catalytic functions. -
Large Sex Differences in Chicken Behavior and Brain Gene Expression Coincide with Few Differences in Promoter DNA-Methylation
Large Sex Differences in Chicken Behavior and Brain Gene Expression Coincide with Few Differences in Promoter DNA-Methylation Daniel Na¨tt1,2*, Beatrix Agnvall1, Per Jensen1 1 IFM Biology, AVIAN Behaviour and Genomics group, Linko¨ping University, Linko¨ping, Sweden, 2 Department of Clinical and Experimental Medicine, Laboratory of Integrative and Behavioral Neuroscience, Linko¨ping University, Linko¨ping, Sweden Abstract While behavioral sex differences have repeatedly been reported across taxa, the underlying epigenetic mechanisms in the brain are mostly lacking. Birds have previously shown to have only limited dosage compensation, leading to high sex bias of Z-chromosome gene expression. In chickens, a male hyper-methylated region (MHM) on the Z-chromosome has been associated with a local type of dosage compensation, but a more detailed characterization of the avian methylome is limiting our interpretations. Here we report an analysis of genome wide sex differences in promoter DNA-methylation and gene expression in the brain of three weeks old chickens, and associated sex differences in behavior of Red Junglefowl (ancestor of domestic chickens). Combining DNA-methylation tiling arrays with gene expression microarrays we show that a specific locus of the MHM region, together with the promoter for the zinc finger RNA binding protein (ZFR) gene on chromosome 1, is strongly associated with sex dimorphism in gene expression. Except for this, we found few differences in promoter DNA-methylation, even though hundreds of genes were robustly differentially expressed across distantly related breeds. Several of the differentially expressed genes are known to affect behavior, and as suggested from their functional annotation, we found that female Red Junglefowl are more explorative and fearful in a range of tests performed throughout their lives. -
Spontaneous Tyrosinase Mutations Identified in Albinos of Three Wild Frog Species
Genes Genet. Syst. (2017) 92, p. 189–196 Albino tyrosinase mutations in frogs 189 Spontaneous tyrosinase mutations identified in albinos of three wild frog species Ikuo Miura1*, Masataka Tagami2, Takeshi Fujitani3 and Mitsuaki Ogata4 1Amphibian Research Center, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8526, Japan 2Gifu World Freshwater Aquarium, 1453 Kawashima-Kasadamachi, Kakamigahara, Gifu 501-6021, Japan 3Higashiyama Zoo and Botanical Gardens Information, 3-70 Higashiyama-Motomachi, Chikusa-ku, Nagoya, Aichi 464-0804, Japan 4Preservation and Research Center, The City of Yokohama, 155-1 Kawaijuku-cho Asahi-ku, Yokohama, Kanagawa 241-0804, Japan (Received 1 November 2016, accepted 9 March 2017; J-STAGE Advance published date: 30 June 2017) The present study reports spontaneous tyrosinase gene mutations identi- fied in oculocutaneous albinos of three Japanese wild frog species, Pelophylax nigromaculatus, Glandirana rugosa and Fejervarya kawamurai. This repre- sents the first molecular analyses of albinic phenotypes in frogs. Albinos of P. nigromaculatus collected from two different populations were found to suffer from frameshift mutations. These mutations were caused by the insertion of a thymine residue within each of exons 1 and 4, while albinos in a third popula- tion lacked three nucleotides encoding lysine in exon 1. Albinos from the former two P. nigromaculatus populations were also associated with splicing variants of mRNA that lacked either exons 2–4 or exon 4. In the other two frog species exam- ined, missense mutations that resulted in amino acid substitutions from glycine to arginine and glycine to aspartic acid were identified in exons 1 and 3, respec- tively. The two glycines in F. -
Identification of Transcriptomic Differences Between Lower
International Journal of Molecular Sciences Article Identification of Transcriptomic Differences between Lower Extremities Arterial Disease, Abdominal Aortic Aneurysm and Chronic Venous Disease in Peripheral Blood Mononuclear Cells Specimens Daniel P. Zalewski 1,*,† , Karol P. Ruszel 2,†, Andrzej St˛epniewski 3, Dariusz Gałkowski 4, Jacek Bogucki 5 , Przemysław Kołodziej 6 , Jolanta Szyma ´nska 7 , Bartosz J. Płachno 8 , Tomasz Zubilewicz 9 , Marcin Feldo 9,‡ , Janusz Kocki 2,‡ and Anna Bogucka-Kocka 1,‡ 1 Chair and Department of Biology and Genetics, Medical University of Lublin, 4a Chod´zkiSt., 20-093 Lublin, Poland; [email protected] 2 Chair of Medical Genetics, Department of Clinical Genetics, Medical University of Lublin, 11 Radziwiłłowska St., 20-080 Lublin, Poland; [email protected] (K.P.R.); [email protected] (J.K.) 3 Ecotech Complex Analytical and Programme Centre for Advanced Environmentally Friendly Technologies, University of Marie Curie-Skłodowska, 39 Gł˛ebokaSt., 20-612 Lublin, Poland; [email protected] 4 Department of Pathology and Laboratory Medicine, Rutgers-Robert Wood Johnson Medical School, One Robert Wood Johnson Place, New Brunswick, NJ 08903-0019, USA; [email protected] 5 Chair and Department of Organic Chemistry, Medical University of Lublin, 4a Chod´zkiSt., Citation: Zalewski, D.P.; Ruszel, K.P.; 20-093 Lublin, Poland; [email protected] St˛epniewski,A.; Gałkowski, D.; 6 Laboratory of Diagnostic Parasitology, Chair and Department of Biology and Genetics, Medical University of Bogucki, J.; Kołodziej, P.; Szyma´nska, Lublin, 4a Chod´zkiSt., 20-093 Lublin, Poland; [email protected] J.; Płachno, B.J.; Zubilewicz, T.; Feldo, 7 Department of Integrated Paediatric Dentistry, Chair of Integrated Dentistry, Medical University of Lublin, M.; et al. -
Title Flap Loop of Glud2 Binds to Cbln1 and Induces Presynaptic
Flap loop of GluD2 binds to Cbln1 and induces presynaptic Title differentiation Author(s) Kuroyanagi, Tomoaki; Hirano, Tomoo Biochemical and biophysical research communications (2010), Citation 398(3): 537-541 Issue Date 2010-07-30 URL http://hdl.handle.net/2433/128851 © 2010 Elsevier Inc.; This is not the published version. Please cite only the published version.; この論文は出版社版であり Right ません。引用の際には出版社版をご確認ご利用ください 。 Type Journal Article Textversion author Kyoto University Flap loop of GluD2 binds to Cbln1 and induces presynaptic differentiation Tomoaki Kuroyanagi and Tomoo Hirano Department of Biophysics, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan Department of Biophysics, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan Correspondence should be addressed to: T. Hirano Tel, 81-75-753-4237 Fax, 81-75-753-4227 E-mail, [email protected] (Tomoaki Kuroyanagi); [email protected] (Tomoo Hirano) 1 Abstract Glutamate receptor δ2 (GluD2) is selectively expressed on the postsynaptic spines at parallel-fiber (PF)-Purkinje neuron (PN) synapses. GluD2 knockout mice show a reduced number of PF-PN synapses, suggesting that GluD2 is involved in synapse formation. Recent studies revealed that GluD2 induces presynaptic differentiation in a manner dependent on its N-terminal domain (NTD) through binding of Cbln1 secreted from cerebellar granule neurons. However, the underlying mechanism of the specific binding of the NTD to Cbln1 remains elusive. Here, we have identified the flap loop (Arg321-Trp339) in the NTD of GluD2 (GluD2-NTD) as a crucial region for the binding to Cbln1 and the induction of presynaptic differentiation. -
Signal Peptide Hydrophobicity Modulates Interaction with the Twin
bioRxiv preprint doi: https://doi.org/10.1101/135103; this version posted May 7, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Signal peptide hydrophobicity modulates interaction with the twin- 2 arginine translocase 3 4 Qi Huang and Tracy Palmer 5 6 7 8 Division of Molecular Microbiology, School of Life Sciences, University of Dundee, Dundee 9 DD1 5EH, UK 10 11 12 13 †For correspondence telephone +44 (0)1382 386464, fax +44 (0)1382 388216, e-mail 14 [email protected] 15 16 17 1 bioRxiv preprint doi: https://doi.org/10.1101/135103; this version posted May 7, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 18 Abstract 19 The general secretory pathway (Sec) and twin-arginine translocase (Tat) operate in parallel to 20 export proteins across the cytoplasmic membrane of prokaryotes and the thylakoid membrane 21 of plant chloroplasts. Substrates are targeted to their respective machineries by N-terminal 22 signal peptides that share a common tripartite organization, however Tat signal peptides 23 harbor a conserved and almost invariant arginine pair that are critical for efficient targeting to 24 the Tat machinery. Tat signal peptides interact with a membrane-bound receptor complex 25 comprised of TatB and TatC components, with TatC containing the twin-arginine recognition 26 site. -
Sarcoma Metabolomics: Current Horizons and Future Perspectives
cells Review Sarcoma Metabolomics: Current Horizons and Future Perspectives Miguel Esperança-Martins 1,2,3,* , Isabel Fernandes 1,3,4 , Joaquim Soares do Brito 4,5, Daniela Macedo 6, Hugo Vasques 4,7, Teresa Serafim 2, Luís Costa 1,3,4 and Sérgio Dias 2,4 1 Centro Hospitalar Universitário Lisboa Norte, Medical Oncology Department, Hospital Santa Maria, 1649-028 Lisboa, Portugal; [email protected] (I.F.); [email protected] (L.C.) 2 Vascular Biology & Cancer Microenvironment Lab, Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, 1649-028 Lisboa, Portugal; tserafi[email protected] (T.S.); [email protected] (S.D.) 3 Translational Oncobiology Lab, Instituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, 1649-028 Lisboa, Portugal 4 Faculdade de Medicina, Universidade de Lisboa, 1649-028 Lisboa, Portugal; [email protected] (J.S.d.B.); [email protected] (H.V.) 5 Centro Hospitalar Universitário Lisboa Norte, Orthopedics and Traumatology Department, Hospital Santa Maria, 1649-028 Lisboa, Portugal 6 Medical Oncology Department, Hospital Lusíadas Lisboa, 1500-458 Lisboa, Portugal; [email protected] 7 General Surgery Department, Instituto Português de Oncologia de Lisboa Francisco Gentil, 1099-023 Lisboa, Portugal * Correspondence: [email protected] Abstract: The vast array of metabolic adaptations that cancer cells are capable of assuming, not Citation: Esperança-Martins, M.; only support their biosynthetic activity, but also fulfill their bioenergetic demands and keep their Fernandes, I.; Soares do Brito, J.; intracellular reduction–oxidation (redox) balance. Spotlight has recently been placed on the en- Macedo, D.; Vasques, H.; Serafim, T.; ergy metabolism reprogramming strategies employed by cancer cells to proliferate.