Echinodermata: Crinoidea: Comatulida: Comasteridae) from the Ryukyu Islands, Japan*
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Genomic Insights of Body Plan Transitions from Bilateral to Pentameral Symmetry in Echinoderms
ARTICLE https://doi.org/10.1038/s42003-020-1091-1 OPEN Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms Yongxin Li1, Akihito Omori 2, Rachel L. Flores3, Sheri Satterfield3, Christine Nguyen3, Tatsuya Ota 4, Toko Tsurugaya5, Tetsuro Ikuta6,7, Kazuho Ikeo4, Mani Kikuchi8, Jason C. K. Leong9, Adrian Reich 10, Meng Hao1, Wenting Wan1, Yang Dong 11, Yaondong Ren1, Si Zhang12, Tao Zeng 12, Masahiro Uesaka13, 1234567890():,; Yui Uchida9,14, Xueyan Li 1, Tomoko F. Shibata9, Takahiro Bino15, Kota Ogawa16, Shuji Shigenobu 15, Mariko Kondo 9, Fayou Wang12, Luonan Chen 12,17, Gary Wessel10, Hidetoshi Saiga7,9,18, ✉ ✉ R. Andrew Cameron 19, Brian Livingston3, Cynthia Bradham20, Wen Wang 1,21,22 & Naoki Irie 9,14,22 Echinoderms are an exceptional group of bilaterians that develop pentameral adult symmetry from a bilaterally symmetric larva. However, the genetic basis in evolution and development of this unique transformation remains to be clarified. Here we report newly sequenced genomes, developmental transcriptomes, and proteomes of diverse echinoderms including the green sea urchin (L. variegatus), a sea cucumber (A. japonicus), and with particular emphasis on a sister group of the earliest-diverged echinoderms, the feather star (A. japo- nica). We learned that the last common ancestor of echinoderms retained a well-organized Hox cluster reminiscent of the hemichordate, and had gene sets involved in endoskeleton development. Further, unlike in other animal groups, the most conserved developmental stages were not at the body plan establishing phase, and genes normally involved in bila- terality appear to function in pentameric axis development. These results enhance our understanding of the divergence of protostomes and deuterostomes almost 500 Mya. -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department. -
Ophiuroidea: Amphilepidida: Amphiuridae), from Geoje Island, Korea
-페이지 연속.(가능한한 짝수되게). -표 선: 맨위,맨아래 1pt / 중간 0.3pt -표 내부여백 : 선 있는 곳 2, 선 없는 곳 0.7 -et al. Journal of Species Research 9(3):273-279, 2020 A newly recorded brittle star, Amphiura (Amphiura) digitula (H.L. Clark, 1911) (Ophiuroidea: Amphilepidida: Amphiuridae), from Geoje Island, Korea Taekjun Lee1 and Sook Shin1,2 1Marine Biological Resource Institute, Sahmyook University, Seoul 01795, Republic of Korea 2Department of Animal Biotechnology and Resource, Sahmyook University, Seoul 01795, Republic of Korea *Correspondent: [email protected] We describe a newly recorded brittle star to South Korea, Amphiura (Amphiura) digitula (H.L. Clark, 1911), that was collected from Geoje Island, at a depth of 47 m. The species is characterized by a small disk, covered by numerous fine scales, small radial shields that are wider than long, a small stumpy hook at the distal end of the radial shield, two tooth papilla, two adoral shield spines, 2nd adoral shield spine longer than other, tapered dramatically toward dull tip, five arms with four proximal arm spines, and two tentacle scales. We also obtained a 657 bp sequence from COI gene and the amplified sequence matched the general DNA barcoding region. The NJ and ML phylogenetic analyses revealed A. (A.) digitula as monophyletic in the Amphiura clade. This species is clearly distinguished from other Amphiura species by morphological characteristics and the mitochondrial COI sequence, and thus represents the sixth Amphiura species reported to occur in Korea. Keywords: Echinodermata, mitochondrial COI, morphology, ophiuroid, taxonomy Ⓒ 2020 National Institute of Biological Resources DOI:10.12651/JSR.2020.9.3.273 INTRODUCTION al., 2016; Boissin et al., 2017; Knott et al., 2018; Paw- son, 2018). -
Morphological Description and Molecular Analysis of Newly Recorded Anneissia Pinguis(Crinoidea: Comatulida: Comatulidae) from Ko
Journal of Species Research 9(4):467-472, 2020 Morphological description and molecular analysis of newly recorded Anneissia pinguis (Crinoidea: Comatulida: Comatulidae) from Korea Philjae Kim1,2 and Sook Shin1,3,* 1Marine Biological Resource Institute, Sahmyook University, Seoul 01795, Republic of Korea 2Division of Ecological Conservation, Bureau of Ecological Research, National Institute of Ecology, Seocheon-gun, Chungnam 33657, Republic of Korea 3Department of Animal Biotechnology & Resource, Sahmyook University, Seoul 01795, Republic of Korea *Correspondent: [email protected] The crinoid specimens of the genus Anneissia were collected from Nokdong, Korea Strait, and Moseulpo, Jeju Island. The specimens were identified as Anneissia pinguis (A.H. Clark, 1909), which belongs to the family Comatulidae of the order Comatulida. Anneissia pinguis was first described by A.H. Clark in 1909 around southern Japan. This species can be distinguished from other Anneissia species by a longish and stout cirrus, much fewer arms, and short distal cirrus segments. The morphological features of Korean specimens are as follows: large disk (20-35 mm), 28-36 segments and 32-43 mm length cirrus, division series in all 4 (3+4), very stout and strong distal pinnule with 18-19 comb and 40 arms. In Korea fauna, only three species of genus Anneissia were recorded: A. intermedia, A. japonica, and A. solaster. In this study, we provide the morphological description and phylogenetic analysis based on cytochrome c oxidase subunit I. Keywords: Anneissia pinguis, crinoid, cytochrome c oxidase subunit I, morphological feature, phylogeny Ⓒ 2020 National Institute of Biological Resources DOI:10.12651/JSR.2020.9.4.467 INTRODUCTION al cytochrome c oxidase subunit I (COI) is usually used in DNA barcoding studies of echinoderms (Ward et al., The family Comatulidae Fleming 1828 comprises 105 2008; Hoareau and Boissin, 2010). -
Taxonomic Study on the Feather Stars (Crinoidea: Echinodermata) from Egyptian Red Sea Coasts and Suez Canal, Egypt
Open Journal of Marine Science, 2012, 2, 51-57 http://dx.doi.org/10.4236/ojms.2012.22007 Published Online April 2012 (http://www.SciRP.org/journal/ojms) Taxonomic Study on the Feather Stars (Crinoidea: Echinodermata) from Egyptian Red Sea Coasts and Suez Canal, Egypt Ahmed M. Hellal Marine Biology and Fish Science Section, Zoology Department, Faculty of Science, Al-Azhar University, Cairo, Egypt Email: [email protected] Received November 27, 2011; revised January 16, 2012; accepted January 25, 2012 ABSTRACT A taxonomic study on the crinoids (feather stars) collected from 34 sites from the Red Sea coasts and islands as well as the Suez Canal was done during the period from 1992 to 2003. A total of 15 species are now known from the Red Sea belonging to eleven genera under six families. Among them four species are endemic to the Red Sea and the two spe- cies, Decametra chadwicki and Lamprometra klunzingeri, are recorded from the Suez Canal for the first time. Also, the two species, Oligometra serripinna and Dorometra aegyptica, are new record from Gulf of Suez, and Decametra mollis from Gulf of Aqaba and Northern Red Sea. This study represents the first proper documentation of crinoid species in the study area. Summaries are provided of the specific habitats and geographical distribution. Keywords: Crinoidea; Red Sea; Suez Canal; Taxonomy; Habitats; Geographical Distribution 1. Introduction 2. Material and Methods Feather-stars constitute group of echinoderms belonging 2.1. Field Observation, Collection and to class Crinoidea and order Comatulida, having five to Preservation hundreds of arms surrounding their cup-like bodies [1,2]. -
Zoologischer Anzeiger
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Zoologischer Anzeiger Jahr/Year: 1909 Band/Volume: 34 Autor(en)/Author(s): Clark Austin Hobart Artikel/Article: The crinoids of the ,,Gazelle"-Expedition. 363-370 363 © Biodiversity Heritage Library, http://www.biodiversitylibrary.org/;download www.zobodat.at 8. The crinoids of the ^^Gazelle'^-Expedition. By Austin Hobart Clark. eingeg. 24. Februar 1909. Among the marine invertebrates brought back by the German steamship »Gazelle« was a number of comatulids, taken on the west and northwest coast of Australia, and on the opposite coast of Timor. Although few in specimens and in species, this collection is one of more than ordinary interest in that it gives us some idea of the faunal rela- tions, in so far as the crinoids are concerned, of the unknown territory along the shores of west Australia. From King George's Haven in the southwest corner Commithus and Ptilometra. both tropical genera, are known, C. trichoptera and P. macronema having been described from there by Professor Johannes Müller over sixty years ago; and it was, of course, to be supposed that the coast line between King George's Sound and the Timor Sea would also prove to support a tro- pical fauna, progressively more and more intense as one proceeded northward, comparable to the conditions found on the east coast; but the entire absence of data prevented any such assumption, for it was quite possible that Comanthus axià Ptilometrahsià reached King George's Sound by creeping down from the Arafura Sea, along the eastern and southern coasts, and that the west coast either had no crinoids at all, or was inhabited by peculiar local formes. -
Artificial Keys to the Genera of Living Stalked Crinoids (Echinodermata) Michel Roux Universite De Reims - France
Nova Southeastern University NSUWorks Marine & Environmental Sciences Faculty Articles Department of Marine and Environmental Sciences 5-1-2002 Artificial Keys to the Genera of Living Stalked Crinoids (Echinodermata) Michel Roux Universite de Reims - France Charles G. Messing Nova Southeastern University, [email protected] Nadia Améziane Muséum national d'Histoire naturelle - Paris, France Find out more information about Nova Southeastern University and the Halmos College of Natural Sciences and Oceanography. Follow this and additional works at: https://nsuworks.nova.edu/occ_facarticles Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Recommended Citation Roux, Michel, Charles G. Messing, and Nadia Ameziane. "Artificial keys to the genera of living stalked crinoids (Echinodermata)." Bulletin of Marine Science 70, no. 3 (2002): 799-830. This Article is brought to you for free and open access by the Department of Marine and Environmental Sciences at NSUWorks. It has been accepted for inclusion in Marine & Environmental Sciences Faculty Articles by an authorized administrator of NSUWorks. For more information, please contact [email protected]. BULLETIN OF MARINE SCIENCE, 70(3): 799–830, 2002 ARTIFICIAL KEYS TO THE GENERA OF LIVING STALKED CRINOIDS (ECHINODERMATA) Michel Roux, Charles G. Messing and Nadia Améziane ABSTRACT Two practical, illustrated, dichotomous keys to the 29 genera of living stalked crinoids are provided: one for entire animals and one for stalk ossicles and fragments. These are accompanied by (1) an overview of taxonomically important morphology, and (2) an alphabetical list by family and genus of the ~95 nominal living species and their distribu- tion by region. This is the first compilation of such data for all living stalked crinoids since Carpenter (1884) recognized 27 species in six genera in his monograph based on the H.M.S. -
Echinodermata: Crinoidea) Kristian Taylor Nova Southeastern University
Nova Southeastern University NSUWorks Theses and Dissertations HCNSO Student Work 8-26-2015 A Phylogenetic Revision of Superfamily Himerometroidea (Echinodermata: Crinoidea) Kristian Taylor Nova Southeastern University This document is a product of extensive research conducted at the Nova Southeastern University Halmos College of Natural Sciences and Oceanography. For more information on research and degree programs at the NSU Halmos College of Natural Sciences and Oceanography, please click here. Follow this and additional works at: http://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Share Feedback About This Item NSUWorks Citation Kristian Taylor. 2015. A Phylogenetic Revision of Superfamily Himerometroidea (Echinodermata: Crinoidea). Doctoral dissertation. Nova Southeastern University. Retrieved from NSUWorks, . (389) http://nsuworks.nova.edu/occ_stuetd/389. This Dissertation is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Nova Southeastern University Oceanographic Center A Phylogenetic Revision of Superfamily Himerometroidea (Echinodermata: Crinoidea) By Kristian Taylor Submitted to the Faculty of Nova Southeastern University Halmos College of Natural Sciences and Oceanography in partial fulfillment of the requirements for the degree of Doctorate of Philosophy Nova Southeastern -
Checklist of the Echinoderms of British Columbia (April 2007) by Philip
Checklist of the Echinoderms of British Columbia (April 2007) by Philip Lambert, Curator Emeritus of Invertebrates Royal British Columbia Museum [email protected] This checklist is based on the information contained in three echinoderm books on Sea Stars, Sea Cucumbers and Brittle Stars (Lambert 1997, 2000; and Lambert and Austin 2007) as well as on unpublished data from the collections of the Royal BC Museum and from Dr. Bill Austin. Many references in the primary literature were consulted for distribution, and the classifications are based in part on the Treatise on Invertebrate Paleontology (Moore 1966); Austin (1985); crinoid monograph by A.H. Clark (1907 to 1967); asteroids by Fisher (1911 to 1930) and Smith Paterson and Lafay (1995) for ophiuroids. This is a work in progress as we process the deep water collections that Fisheries and Oceans Canada has collected over the last 6 years. Several new species have been recorded for BC and more are expected. Species in bold occur in less than 200 metres in BC. The stated depth range refers to the entire geographic range of the species. Species not yet recorded in BC but occurring nearby to the north and south of BC have been included in the list with *. CLASS CRINOIDEA (7 species in BC) Sea Lilies and Feather Stars Depth (metres) Order Hyocrinida Family Hyocrinidae 1. Ptilocrinus pinnatus A.H. Clark, 1907 Five-Armed Sea Lily 2904 Order Bourgueticrinida Family Bathycrinidae 2. Bathycrinus pacificus A.H. Clark, 1907 Ten-armed Abyssal Sea Lily 1655 Order Comatulida Family Pentametrocrinidae 3. Pentametrocrinus cf. varians (P.H. -
Growth, Injury, and Population Dynamics in the Extant Cyrtocrinid Holopus Mikihe (Crinoidea, Echinodermata) Near Roatan, Honduras V
Nova Southeastern University NSUWorks Marine & Environmental Sciences Faculty Articles Department of Marine and Environmental Sciences 1-1-2015 Growth, Injury, and Population Dynamics in the Extant Cyrtocrinid Holopus mikihe (Crinoidea, Echinodermata) near Roatan, Honduras V. J. Syverson University of Michigan - Ann Arbor Charles G. Messing Nova Southeastern University, [email protected] Karl Stanley Roatan Institute of Deepsea Exploration - Honduras Tomasz K. Baumiller University of Michigan - Ann Arbor Find out more information about Nova Southeastern University and the Halmos College of Natural Sciences and Oceanography. Follow this and additional works at: https://nsuworks.nova.edu/occ_facarticles Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons NSUWorks Citation V. J. Syverson, Charles G. Messing, Karl Stanley, and Tomasz K. Baumiller. 2015. Growth, Injury, and Population Dynamics in the Extant Cyrtocrinid Holopus mikihe (Crinoidea, Echinodermata) near Roatan, Honduras .Bulletin of Marine Science , (1) : 47 -61. https://nsuworks.nova.edu/occ_facarticles/489. This Article is brought to you for free and open access by the Department of Marine and Environmental Sciences at NSUWorks. It has been accepted for inclusion in Marine & Environmental Sciences Faculty Articles by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Bull Mar Sci. 91(1):47–61. 2015 research paper http://dx.doi.org/10.5343/bms.2014.1061 Growth, injury, and population dynamics in the extant cyrtocrinid Holopus mikihe (Crinoidea, Echinodermata) near Roatán, Honduras 1 University of Michigan Museum VJ Syverson 1 * of Paleontology, 1109 Geddes Charles G Messing 2 Avenue, Ann Arbor, Michigan 3 48109. Karl Stanley 1 2 Nova Southeastern University Tomasz K Baumiller Oceanographic Center, 8000 North Ocean Drive, Dania Beach, Florida 33004. -
Inventory of the Specimens of the Class Crinoidea (Echinodermata) Deposited at the Invertebrates Collection at the Museo Argenti
Rev. Mus. Argentino Cienc. Nat., n.s. 23(1): 101-108, 2021 ISSN 1514-5158 (impresa) ISSN 1853-0400 (en línea) Inventory of the specimens of the Class Crinoidea (Echinodermata) deposited at the Invertebrates collection at the Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” Renata M. PERTOSSI1* & Mariano I. MARTINEZ1 1Laboratorio de Ecosistemas Costeros, Plataforma, Aguas Profundas y Malacología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” (MACN-CONICET), Av. Ángel Gallardo 470 (C1405DJR), Buenos Aires, Argentina. *Email: [email protected] Abstract: The invertebrate collection of the Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” (MACN-In) is one of the most important in Latin America. It has more than 1411 type batches with ~90 type specimens of echinoderms. For the present study we analyzed 56 lots of crinoids from the MACN-In. We also checked and updated the identification, when necessary. Seven species belonging to 6 genera were identified; 23 specimens remain unidentified. The diversity of crinoids for Chile, Uruguay and Brazil and Antarctica is dis- cussed. The MACN-In has several lots of crinoids from different parts of the world and numerous specimens of the 2 representative species from Argentina, Isometra vivipara Mortensen, 1917 and Phrixometra nutrix (Mortensen, 1918). This is the first published inventory of crinoids from samples deposited at the MACN-In collection, which will be a useful tool for future studies regarding echinoderms, particularly crinoids. Key words: crinoids, Argentina, Antarctica, MACN-In, lots. Resumen: Inventario de los ejemplares de Clase Crinoidea (Echinodermata) en la colección de Invertebrados del Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”. La colección de invertebrados del Museo Argentino de Ciencias Naturales “Bernardino Rivadavia” (MACN-In) es una de las más importantes de América Latina. -
Proceedings of the United States National Museum
THE HOMOLOGIES OF THE ARM JOINTS AND ARM DIVI- SIONS IN THE RECENT CRINOIDS OF THE FAMILIES OF THE COMATULIDA AND THE PENTACRINITID.E. By Austin Hobart Clark, of the United Slates Bureau of Fisheries. Hitherto, most writers on the recent crinoids have considered the arms as beginning with the tirst joints beyond the ("primary") radials; but so far no one has pointed out the exact relations between the arms and arm joints of the different genera and families. Dr. P. H. Carpenter, in his most admirable essay on the genus " "Actinometra a (i. e.. Comaster and Comatula), pointed out that in the Comatulida the first two joints beyond each axillary are always articulated in the same way as the two first post-radial joints, no matter how many axillaries may intervene between the radials and the free, undivided arms. He does not here mention the genus Eu- diocrinus, as understood by him, but in his monograph of the recent stalked crinoids h he says: In the five-armed Eudiocrinus indivisus the next joints beyond the radials are syzygial, with pinnules on the epizygals, which clearly shows that they imisl be considered as arm joints and not as belonging to the calyx, although they undoubtedly represent the so-called second and third radials of a ten-armed erinoid. The other species of Eudiocrimis have these two primitively separate joints not united by syzygy but articulated, just as in Thaumatocrinus. The second one bears a pinnule both in Thaumatocrinus and in Eudiocrinus varians; but in Eudiocrinus semperi and Eudiocrinus japonicus the first pinnule is on the fourth joint after the radial.