Zootaxa,Phylum Echinodermata
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Zamora, S., Rahman, IA, & Smith, AB (2012). Plated Cambrian
Zamora, S., Rahman, I. A., & Smith, A. B. (2012). Plated Cambrian bilaterians reveal the earliest stages of echinoderm evolution. PLoS ONE, 7(6), [e38296]. https://doi.org/10.1371/journal.pone.0038296 Publisher's PDF, also known as Version of record Link to published version (if available): 10.1371/journal.pone.0038296 Link to publication record in Explore Bristol Research PDF-document University of Bristol - Explore Bristol Research General rights This document is made available in accordance with publisher policies. Please cite only the published version using the reference above. Full terms of use are available: http://www.bristol.ac.uk/red/research-policy/pure/user-guides/ebr-terms/ Plated Cambrian Bilaterians Reveal the Earliest Stages of Echinoderm Evolution Samuel Zamora1, Imran A. Rahman2, Andrew B. Smith1* 1 Department of Palaeontology, The Natural History Museum, London, United Kingdom, 2 School of Geography, Earth & Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, United Kingdom Abstract Echinoderms are unique in being pentaradiate, having diverged from the ancestral bilaterian body plan more radically than any other animal phylum. This transformation arises during ontogeny, as echinoderm larvae are initially bilateral, then pass through an asymmetric phase, before giving rise to the pentaradiate adult. Many fossil echinoderms are radial and a few are asymmetric, but until now none have been described that show the original bilaterian stage in echinoderm evolution. Here we report new fossils from the early middle Cambrian of southern Europe that are the first echinoderms with a fully bilaterian body plan as adults. Morphologically they are intermediate between two of the most basal classes, the Ctenocystoidea and Cincta. -
Petition to List the Black Teatfish, Holothuria Nobilis, Under the U.S. Endangered Species Act
Before the Secretary of Commerce Petition to List the Black Teatfish, Holothuria nobilis, under the U.S. Endangered Species Act Photo Credit: © Philippe Bourjon (with permission) Center for Biological Diversity 14 May 2020 Notice of Petition Wilbur Ross, Secretary of Commerce U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected], [email protected] Dr. Neil Jacobs, Acting Under Secretary of Commerce for Oceans and Atmosphere U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected] Petitioner: Kristin Carden, Oceans Program Scientist Sarah Uhlemann, Senior Att’y & Int’l Program Director Center for Biological Diversity Center for Biological Diversity 1212 Broadway #800 2400 NW 80th Street, #146 Oakland, CA 94612 Seattle,WA98117 Phone: (510) 844‐7100 x327 Phone: (206) 324‐2344 Email: [email protected] Email: [email protected] The Center for Biological Diversity (Center, Petitioner) submits to the Secretary of Commerce and the National Oceanographic and Atmospheric Administration (NOAA) through the National Marine Fisheries Service (NMFS) a petition to list the black teatfish, Holothuria nobilis, as threatened or endangered under the U.S. Endangered Species Act (ESA), 16 U.S.C. § 1531 et seq. Alternatively, the Service should list the black teatfish as threatened or endangered throughout a significant portion of its range. This species is found exclusively in foreign waters, thus 30‐days’ notice to affected U.S. states and/or territories was not required. The Center is a non‐profit, public interest environmental organization dedicated to the protection of native species and their habitats. -
Crinoidea, Echinodermata) from Poland
Title: Uncovering the hidden diversity of Mississippian crinoids (Crinoidea, Echinodermata) from Poland Author: Mariusz A. Salamon, William I. Ausich, Tomasz Brachaniec, Bartosz J. Płachno, Przemysław Gorzelak Citation style: Salamon Mariusz A., Ausich William I., Brachaniec Tomasz, Płachno Bartosz J., Gorzelak Przemysław. (2020). Uncovering the hidden diversity of Mississippian crinoids (Crinoidea, Echinodermata) from Poland. "PeerJ" Vol. 8 (2020), art. no e10641, doi 10.7717/peerj.10641 Uncovering the hidden diversity of Mississippian crinoids (Crinoidea, Echinodermata) from Poland Mariusz A. Salamon1, William I. Ausich2, Tomasz Brachaniec1, Bartosz J. Pªachno3 and Przemysªaw Gorzelak4 1 Faculty of Natural Sciences, Institute of Earth Sciences, University of Silesia in Katowice, Sosnowiec, Poland 2 School of Earth Sciences, Ohio State University, Columbus, OH, United States of America 3 Faculty of Biology, Institute of Botany, Jagiellonian University in Kraków, Cracow, Poland 4 Institute of Paleobiology, Polish Academy of Sciences, Poland, Warsaw, Poland ABSTRACT Partial crinoid crowns and aboral cups are reported from the Mississippian of Poland for the first time. Most specimens are partially disarticulated or isolated plates, which prevent identification to genus and species, but regardless these remains indicate a rich diversity of Mississippian crinoids in Poland during the Mississippian, especially during the late Viséan. Lanecrinus? sp. is described from the late Tournaisian of the D¦bnik Anticline region. A high crinoid biodiversity occurred during late Viséan of the Holy Cross Mountains, including the camerate crinoids Gilbertsocrinus? sp., Platycrinitidae Indeterminate; one flexible crinoid; and numerous eucladid crinoids, including Cyathocrinites mammillaris (Phillips), three taxa represented by partial cups left in open nomenclature, and numerous additional taxa known only from isolated radial plates, brachial plates, and columnals. -
"Lophophorates" Brachiopoda Echinodermata Asterozoa
Deuterostomes Bryozoa Phoronida "lophophorates" Brachiopoda Echinodermata Asterozoa Stelleroidea Asteroidea Ophiuroidea Echinozoa Holothuroidea Echinoidea Crinozoa Crinoidea Chaetognatha (arrow worms) Hemichordata (acorn worms) Chordata Urochordata (sea squirt) Cephalochordata (amphioxoius) Vertebrata PHYLUM CHAETOGNATHA (70 spp) Arrow worms Fossils from the Cambrium Carnivorous - link between small phytoplankton and larger zooplankton (1-15 cm long) Pharyngeal gill pores No notochord Peculiar origin for mesoderm (not strictly enterocoelous) Uncertain relationship with echinoderms PHYLUM HEMICHORDATA (120 spp) Acorn worms Pharyngeal gill pores No notochord (Stomochord cartilaginous and once thought homologous w/notochord) Tornaria larvae very similar to asteroidea Bipinnaria larvae CLASS ENTEROPNEUSTA (acorn worms) Marine, bottom dwellers CLASS PTEROBRANCHIA Colonial, sessile, filter feeding, tube dwellers Small (1-2 mm), "U" shaped gut, no gill slits PHYLUM CHORDATA Body segmented Axial notochord Dorsal hollow nerve chord Paired gill slits Post anal tail SUBPHYLUM UROCHORDATA Marine, sessile Body covered in a cellulose tunic ("Tunicates") Filter feeder (» 200 L/day) - perforated pharnx adapted for filtering & repiration Pharyngeal basket contractable - squirts water when exposed at low tide Hermaphrodites Tadpole larvae w/chordate characteristics (neoteny) CLASS ASCIDIACEA (sea squirt/tunicate - sessile) No excretory system Open circulatory system (can reverse blood flow) Endostyle - (homologous to thyroid of vertebrates) ciliated groove -
Genomic Insights of Body Plan Transitions from Bilateral to Pentameral Symmetry in Echinoderms
ARTICLE https://doi.org/10.1038/s42003-020-1091-1 OPEN Genomic insights of body plan transitions from bilateral to pentameral symmetry in Echinoderms Yongxin Li1, Akihito Omori 2, Rachel L. Flores3, Sheri Satterfield3, Christine Nguyen3, Tatsuya Ota 4, Toko Tsurugaya5, Tetsuro Ikuta6,7, Kazuho Ikeo4, Mani Kikuchi8, Jason C. K. Leong9, Adrian Reich 10, Meng Hao1, Wenting Wan1, Yang Dong 11, Yaondong Ren1, Si Zhang12, Tao Zeng 12, Masahiro Uesaka13, 1234567890():,; Yui Uchida9,14, Xueyan Li 1, Tomoko F. Shibata9, Takahiro Bino15, Kota Ogawa16, Shuji Shigenobu 15, Mariko Kondo 9, Fayou Wang12, Luonan Chen 12,17, Gary Wessel10, Hidetoshi Saiga7,9,18, ✉ ✉ R. Andrew Cameron 19, Brian Livingston3, Cynthia Bradham20, Wen Wang 1,21,22 & Naoki Irie 9,14,22 Echinoderms are an exceptional group of bilaterians that develop pentameral adult symmetry from a bilaterally symmetric larva. However, the genetic basis in evolution and development of this unique transformation remains to be clarified. Here we report newly sequenced genomes, developmental transcriptomes, and proteomes of diverse echinoderms including the green sea urchin (L. variegatus), a sea cucumber (A. japonicus), and with particular emphasis on a sister group of the earliest-diverged echinoderms, the feather star (A. japo- nica). We learned that the last common ancestor of echinoderms retained a well-organized Hox cluster reminiscent of the hemichordate, and had gene sets involved in endoskeleton development. Further, unlike in other animal groups, the most conserved developmental stages were not at the body plan establishing phase, and genes normally involved in bila- terality appear to function in pentameric axis development. These results enhance our understanding of the divergence of protostomes and deuterostomes almost 500 Mya. -
Echinodermata: Crinoidea: Comatulida: Comasteridae) from the Ryukyu Islands, Japan*
Zootaxa 3367: 252–268 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) Comanthus kumi, a new shallow-water comatulid (Echinodermata: Crinoidea: Comatulida: Comasteridae) from the Ryukyu Islands, Japan* YOSHIHISA FUJITA1,2,4 & MASAMI OBUCHI3 1University Education Center, University of the Ryukyus, 1 Senbaru, Nishihara-cho, Okinawa 903-0213, Japan. E-mail: [email protected] 2Marine Learning Center, 2-95-101 Miyagi, Chatan-cho, Okinawa 904-0113, Japan. 3Biological Institute on Kuroshio 560 Nishidomari, Otuski-cho, Kochi, 788-0333 Japan. E-mail: [email protected] 4Corresponding author * In: Naruse, T., Chan, T.-Y., Tan, H.H., Ahyong, S.T. & Reimer, J.D. (2012) Scientific Results of the Marine Biodiversity Expedition — KUMEJIMA 2009. Zootaxa, 3367, 1–280. Abstract A new species of the genus Comanthus A.H. Clark, 1908, is described on the basis of specimens collected from Kume Island and Okinawa Island, the Ryukyu Islands, Japan. Comanthus kumi n. sp. is distinguished from all ten congeners by having extremely elongate arms exceeding 300 mm in length and the colouration in life. The new species concealed its whole body in a crevice or small hole on coral reefs during the day and protruded only several elongate arms on the reef surface at night. This habit suggests that the new species is nocturnal. Key words: Crinoidea, Comatulida, Comasteridae, new species, Okinawa Introduction The species of the comatulid genus Comanthus A.H. Clark, 1908 are well known in shallow-water coral reefs (Kogo 1998; Rowe et al. 1986). The genus was established by A.H. -
Echinodermata: Holothuroidea: Apodida: Chiridotidae), with Special Reference to the Ultrastructure of Sigmoid Bodies
Species Diversity 17: 15–20 25 May 2012 Redescription of Scoliorhapis lindbergi comb. nov. (Echinodermata: Holothuroidea: Apodida: Chiridotidae), with Special Reference to the Ultrastructure of Sigmoid Bodies Junko Inoue1,2 and Hiroshi Kajihara3 1 Graduate School of Science, University of Tokyo, Bunkyo-ku, Tokyo 113-8654, Japan 2 National Museum of Nature and Science, 4-1-1, Amakubo, Tsukuba 305-0005, Japan E-mail: [email protected] 3 Department of Natural History Sciences, Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan E-mail: [email protected] (Received 1 March 2011; Accepted 4 October 2011) We reclassify and redescribe the apodid holothurian Scoliodotella uchidai Oguro, 1961 as Scoliorhapis lindbergi (D’yakonov in D’yakonov et al., 1958) comb. nov., based on newly collected topotypes of the former from Akkeshi Bay, Ja- pan. We conrm the previously proposed, but not widely recognized, synonymy between these two nominal species. Scan- ning electron microscopy of 968 sigmoid bodies from 17 specimens of S. lindbergi from Akkeshi Bay revealed that 12.0% of them possessed spinelets, which varied in size, number, and arrangement, and that 0.8% were anchor-shaped, resembling ossicles characteristic of Synaptidae. Key Words: Apodida, Scoliorhapis, spinelets, sigmoid bodies, Synaptina, anchor ossicles. lindbergi (Utinomi 1965; Levin 1982). Because Utinomi’s Introduction (1965) and Levin’s (1982) works were published in the Japa- nese and Russian languages, respectively, these have not Apodida, one of the six orders generally recognized in the been cited in the English literature (e.g., overlooked by Kerr class Holothuroidea, with about 270 species known world- 2001; O’Loughlin and VandenSpiegel 2010; Paulay 2010). -
PROGRAMME ABSTRACTS AGM Papers
The Palaeontological Association 63rd Annual Meeting 15th–21st December 2019 University of Valencia, Spain PROGRAMME ABSTRACTS AGM papers Palaeontological Association 6 ANNUAL MEETING ANNUAL MEETING Palaeontological Association 1 The Palaeontological Association 63rd Annual Meeting 15th–21st December 2019 University of Valencia The programme and abstracts for the 63rd Annual Meeting of the Palaeontological Association are provided after the following information and summary of the meeting. An easy-to-navigate pocket guide to the Meeting is also available to delegates. Venue The Annual Meeting will take place in the faculties of Philosophy and Philology on the Blasco Ibañez Campus of the University of Valencia. The Symposium will take place in the Salon Actos Manuel Sanchis Guarner in the Faculty of Philology. The main meeting will take place in this and a nearby lecture theatre (Salon Actos, Faculty of Philosophy). There is a Metro stop just a few metres from the campus that connects with the centre of the city in 5-10 minutes (Line 3-Facultats). Alternatively, the campus is a 20-25 minute walk from the ‘old town’. Registration Registration will be possible before and during the Symposium at the entrance to the Salon Actos in the Faculty of Philosophy. During the main meeting the registration desk will continue to be available in the Faculty of Philosophy. Oral Presentations All speakers (apart from the symposium speakers) have been allocated 15 minutes. It is therefore expected that you prepare to speak for no more than 12 minutes to allow time for questions and switching between presenters. We have a number of parallel sessions in nearby lecture theatres so timing will be especially important. -
Zootaxa, a New Genus and Species of Western Atlantic
Zootaxa 2449: 49–68 (2010) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2010 · Magnolia Press ISSN 1175-5334 (online edition) A new genus and species of Western Atlantic sea lily in the family Septocrinidae (Echinodermata: Crinoidea: Bourgueticrinida) ALEXANDR N. MIRONOV1 & DAVID L. PAWSON2 1P. P. Shirshov Institute of Oceanology, Russian Academy of Sciences, Nakhimovskyi Prospekt 36, Moscow 117997, Russia. E-mail: [email protected] 2D.L. Pawson, National Museum of Natural History, Smithsonian Institution, Washington DC 20013-7012, USA. E-mail: [email protected] Abstract Rouxicrinus vestitus new genus, new species, collected during submersible dives at depths of 421–887 m near Barbados, Colombia and the Bahamas is described, and notes on ecology are included. It is referred to the family Septocrinidae Mironov, 2000, which now comprises three genera, Zeuctocrinus A.M. Clark, 1973, Septocrinus Mironov, 2000, and Rouxicrinus new genus. This new genus differs significantly from both Septocrinus and Zeuctocrinus in having numerous low columnals in the proxistele, which tapers toward the crown, first pinnule arising more proximally, thorns on brachials and pinnulars, and a thick covering of soft tissue on arms and pinnules. Key words: Rouxicrinus vestitus, Caribbean Sea, taxonomy, Crinoidea, Bourgueticrinida, Septocrinidae Introduction The family Septocrinidae is a small group of extant ten-armed sea lilies. The first-captured species of this group, Zeuctocrinus gisleni A.M. Clark, 1973, has been described in detail by A.M. Clark (1973), Roux (1977) and Roux et al. (2002). A.M. Clark (1973) referred Zeuctocrinus to the family Phrynocrinidae A.H. Clark 1907 comprising the extant Phrynocrinus nudus A.H. -
Phylogenomic Analyses of Echinoid Diversification Prompt a Re
bioRxiv preprint doi: https://doi.org/10.1101/2021.07.19.453013; this version posted August 4, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Phylogenomic analyses of echinoid diversification prompt a re- 2 evaluation of their fossil record 3 Short title: Phylogeny and diversification of sea urchins 4 5 Nicolás Mongiardino Koch1,2*, Jeffrey R Thompson3,4, Avery S Hatch2, Marina F McCowin2, A 6 Frances Armstrong5, Simon E Coppard6, Felipe Aguilera7, Omri Bronstein8,9, Andreas Kroh10, Rich 7 Mooi5, Greg W Rouse2 8 9 1 Department of Earth & Planetary Sciences, Yale University, New Haven CT, USA. 2 Scripps Institution of 10 Oceanography, University of California San Diego, La Jolla CA, USA. 3 Department of Earth Sciences, 11 Natural History Museum, Cromwell Road, SW7 5BD London, UK. 4 University College London Center for 12 Life’s Origins and Evolution, London, UK. 5 Department of Invertebrate Zoology and Geology, California 13 Academy of Sciences, San Francisco CA, USA. 6 Bader International Study Centre, Queen's University, 14 Herstmonceux Castle, East Sussex, UK. 7 Departamento de Bioquímica y Biología Molecular, Facultad de 15 Ciencias Biológicas, Universidad de Concepción, Concepción, Chile. 8 School of Zoology, Faculty of Life 16 Sciences, Tel Aviv University, Tel Aviv, Israel. 9 Steinhardt Museum of Natural History, Tel-Aviv, Israel. 10 17 Department of Geology and Palaeontology, Natural History Museum Vienna, Vienna, Austria 18 * Corresponding author. -
For Peer Review
Page 1 of 40 Geological Journal Page 1 of 32 1 2 3 Neogene echinoids from the Cayman Islands, West Indies: regional 4 5 6 implications 7 8 9 10 1 2 3 11 STEPHEN K. DONOVAN *, BRIAN JONES and DAVID A. T. HARPER 12 13 14 15 1Department of Geology, Naturalis Biodiversity Center, Leiden, the Netherlands 16 17 2Department of Earth and Atmospheric Sciences, University of Alberta, Edmonton, Canada, T6G 2E3 18 For Peer Review 19 3 20 Department of Earth Sciences, Durham University, Durham, UK 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 *Correspondence to: S. K. Donovan, Department of Geology, Naturalis Biodiversity Center, 49 50 Darwinweg 2, 2333 CR Leiden, the Netherlands. 51 52 E-mail: [email protected] 53 54 55 56 57 58 59 60 http://mc.manuscriptcentral.com/gj Geological Journal Page 2 of 40 Page 2 of 32 1 2 3 The first fossil echinoids are recorded from the Cayman Islands. A regular echinoid, Arbacia? sp., the 4 5 spatangoids Brissus sp. cf. B. oblongus Wright and Schizaster sp. cf. S. americanus (Clark), and the 6 7 clypeasteroid Clypeaster sp. are from the Middle Miocene Cayman Formation. Test fragments of the 8 9 mellitid clypeasteroid, Leodia sexiesperforata (Leske), are from the Late Pleistocene Ironshore 10 11 Formation. Miocene echinoids are preserved as (mainly internal) moulds; hence, all species are left 12 13 14 in open nomenclature because of uncertainties regarding test architecture. -
Reinterpretation of the Enigmatic Ordovician Genus Bolboporites (Echinodermata)
Reinterpretation of the enigmatic Ordovician genus Bolboporites (Echinodermata). Emeric Gillet, Bertrand Lefebvre, Véronique Gardien, Emilie Steimetz, Christophe Durlet, Frédéric Marin To cite this version: Emeric Gillet, Bertrand Lefebvre, Véronique Gardien, Emilie Steimetz, Christophe Durlet, et al.. Reinterpretation of the enigmatic Ordovician genus Bolboporites (Echinodermata).. Zoosymposia, Magnolia Press, 2019, 15 (1), pp.44-70. 10.11646/zoosymposia.15.1.7. hal-02333918 HAL Id: hal-02333918 https://hal.archives-ouvertes.fr/hal-02333918 Submitted on 13 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Reinterpretation of the Enigmatic Ordovician Genus Bolboporites 2 (Echinodermata) 3 4 EMERIC GILLET1, BERTRAND LEFEBVRE1,3, VERONIQUE GARDIEN1, EMILIE 5 STEIMETZ2, CHRISTOPHE DURLET2 & FREDERIC MARIN2 6 7 1 Université de Lyon, UCBL, ENSL, CNRS, UMR 5276 LGL-TPE, 2 rue Raphaël Dubois, F- 8 69622 Villeurbanne, France 9 2 Université de Bourgogne - Franche Comté, CNRS, UMR 6282 Biogéosciences, 6 boulevard 10 Gabriel, F-2100 Dijon, France 11 3 Corresponding author, E-mail: [email protected] 12 13 Abstract 14 Bolboporites is an enigmatic Ordovician cone-shaped fossil, the precise nature and systematic affinities of 15 which have been controversial over almost two centuries.