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AMBRA1 Controls Plant Development and Senescence in Physcomitrella Patens
Presentation type: Oral Presentation, Poster Presentation (underline the preferred type) AMBRA1 controls plant development and senescence in Physcomitrella patens. Alessandro Alboresi1, Jessica Ceccato1, Tomas Morosinotto1, Luisa Dalla Valle1. The first one should be the presenting/corresponding author (underlined) 1Dipartimento di Biologia, Università di Padova, Via Ugo Bassi 58/B, 35121, Padova ([email protected]; [email protected]; [email protected]) Autophagy is a universal mechanism that in plants control development, resistance to stresses and starvation. The role of autophagy is possible thanks to the programmed degradation of cell material that is delivered to the vacuole where hydrolases and proteases are localized. So far, many autophagy-related proteins (ATGs) have been identified. Some of them are universal, some are either specific to animals, plants or yeast. ATG protein complexes govern autophagosome initiation, nucleation, expansion, and maturation. In particular, the regulation of nucleation by the ATG6 (Beclin-1 in mammals) complex has not been well defined in plants. Here we described the study of the Activating Molecule in Beclin 1-Regulated Autophagy (AMBRA1) protein, recently identified in mice and then characterized in our department in zebrafish and in the non-vertebrate chordate Botryllus schlosseri. In animals AMBRA1 is a positive regulator of autophagy that binds Beclin-1 upon autophagic stimuli. AMBRA1 is a large intrinsically disordered protein, able to bind other regulatory partners involved in cell processes such as autophagy, apoptosis, cell proliferation, development and cancer. AMBRA1 sequence was found in plant genomes and we are studying its function in Physcomitrella patens where two lowly expressed genes are present, AMBRA1a and AMBRA1b. -
Anthocerotophyta) of Colombia
BOTANY https://dx.doi.org/10.15446/caldasia.v40n2.71750 http://www.revistas.unal.edu.co/index.php/cal Caldasia 40(2):262-270. Julio-diciembre 2018 Key to hornworts (Anthocerotophyta) of Colombia Clave para Antocerotes (Anthocerotophyta) de Colombia S. ROBBERT GRADSTEIN Muséum National d’Histoire Naturelle, Institut de Systématique, Evolution, Biodiversité (UMR 7205), Paris, France. [email protected] ABSTRACT A key is presented to seven genera and fifteen species of hornworts recorded from Colombia. Three species found in Ecuador but not yet in Colombia (Dendroceros crispatus, Phaeomegaceros squamuligerus, and Phaeoceros tenuis) are also included in the key. Key words. Biodiversity, identification, taxonomy. RESUMEN Se presenta una clave taxonómica para los siete géneros y quince especies de antocerotes registrados en Colombia. Tres especies registradas en Ecuador, pero aún no en Colombia (Dendroceros crispatus, Phaeomegaceros squamuligerus y Phaeoceros tenuis), también son incluidas. Palabras clave. Biodiversidad, identificación, taxonomía. INTRODUCCIÓN visible as black dots, rarely as blue lines (in Leiosporoceros); chloroplasts large, Hornworts (Anthocerotophyta) are a small 1–2(–4) per cell, frequently with a pyrenoid; division of bryophytes containing about 192 2) gametangia immersed in the thallus, accepted species worldwide (excluding 28 originating from an inner thallus cell; 3) doubtful species), in five families and 12 sporophyte narrowly cylindrical, without genera (Villarreal and Cargill 2016). They seta; 4) sporophyte growth by means of are commonly found on soil in rather open a basal meristem; 5) spore maturation places, but also on rotten logs, rock, bark asynchronous; and 6) capsule dehiscence or on living leaves. Hornworts were in the gradual, from the apex slowly downwards, past often classified with the liverworts by means of 2(-4) valves, rarely by an because of their superficial resemblance to operculum. -
Characters of Bryophytes and Their Classification
Unit–1 Characters of Bryophytes and their Classification (Lesson Structure) 1.0 Objective 1.1 Introduction 1.2 Characters of Bryophytes 1.3 Classification of Bryophytes 1.4 Questions for Exercise 1.5 Suggested readings 1.0 Objective : Bryophytes occupy a position just intermediate between the green thallophytes (Algae) and the vascular cryptogams (Pteridophytes). The objective of this unit is to make the students familiar with the characters & classification of Bryophytes. 1.1 Introduction : Bryophytes are plants of amphibious zone. During the dry period they become almost brittle in texture. With the onset of rainy season the apparently dried, brittle thalli turn green and become active to carry out the normal life functions. The group Bryophyta (Greek word; Byon = moss, Phyton = plant) includes the simplest and most primitive land plants. About 960 genera & 24,000 species have been reported in Bryophyta. Most of the Bryophytes are land dwellers which inhabit damp, shaded and humid localities. They are essentially terrestrial but they fail to complete their life cycle without water. Thus due to Characters of Bryophytes and their Classification peculiar type of their habitats, they are neither treated as perfect land plants nor aquatic. They are therefore, most appropriately called as amphibians of the plant kingdom. However] a few grow under diverse habitat such as aquatic submerged in water (eg. Riella, Riccia fluitans, Ricciocarpus), in bogs (e.g. Sphagnum), as epiphytes on tree trunks and branches (e.g. Dendroceros), epiphyllous (e.g. Radula protensa) or even in desert (e.g. Tortula desertorum ). 1.2 Characters of Bryophytes : Habitat (1) The plants usually grow in moist and shady places. -
M.Sc. BOTANY SEMESTER - I BO- 7115 PAPER - I DIVERSITY of VIRUSES, MYCOPLASMA, BACTERIA and FUNGI (60 Hrs)
ST. JOSEPH'S COLLEGE (AUTONOMOUS) M.Sc. BOTANY SEMESTER - I BO- 7115 PAPER - I DIVERSITY OF VIRUSES, MYCOPLASMA, BACTERIA AND FUNGI (60 Hrs) Unit I Five kingdom, Eight kingdom classification and Three domains of 02 hrs living organisms. Unit -II Viruses – general characters, nomenclature, classification; 08 hrs morphology, structure, transmission and replication. Purification of plant viruses. Symptoms of viral diseases in plants Mycoplasma – General characters , classification ,ultrastructure 05 hrs Unit-III and reproduction. Brief account of mycoplasmal diseases of plants- Little leaf of Brinjal. Unit -IV Bacteria –Forms, distribution and classification according to 12 hrs Bergy’s System, Classification based on DNA-DNA hybridization, 16s rRNA sequencing; Nutritional types: Autotrophic, heterotrophic, photosynthetic,chemosynthetic,saprophytic,parasitic and symbiotic ; A brief account on methonogenic bacteria ; Brief account of Actinomycetes and their importance in soil and medical microbiology. Unit – V Fungi 20 hrs General characteristics, Classification (Ainsworth 1973, McLaughlin 2001), structure and reproduction. Salient features of Myxomycota, Mastigomycotina, Zygomycotina, Ascomycotina, Basidiomycotina and Deuteromycotina and their classificafion upto class level. Unit - VI Brief account of fungal heterothallism, sex hormones and 09 hrs Parasexual cycle. Brief account of mycorrhizae,lichens, fungal symbionts in insects, fungi as biocontrol agents ( Trichoderma and nematophagous). Unit – VII Isolation, purification and culturing of microorganisms 04 hrs (bacteria and fungi). 1 PRACTICALS: Micrometry. Haemocytometer. Isolation, culture and staining techniques of Bacteria and Fungi. Type study: Stemonites, Synchytrium, Saprolegnia, Albugo, Phytophthora, Mucor/Rhizopus , Erysiphe, Aspergillus, Chaetomium, Pencillium, Morchella, Hamileia, Ustilago Lycoperdon, Cyathes, Dictyophora, Polyporus, Trichoderma, Curvularia, Alternaria, Drechslera and Pestalotia. Study of few bacterial, viral, mycoplasmal diseases in plants (based on availability). -
The Bryological Times Number 123 October 2007
______________________________________________________________________________________________________ The Bryological Times Number 123 October 2007 Newsletter of the International Association of Bryologists CONTENTS IAB News World Conference on Bryology: • Report of the IAB Council Meeting .................................................................................................................. 2 • Some Highlights of the Scientific sessions by Jessica Beever ................................................................... 5 • Some Highlights of the Scientific sessions by Allison Downing ................................................................. 9 Obituary • Carmela Cortini Pedrotti (1931 - 2007) .......................................................................................................... 12 Personal News – new IAB members ................................................................................................................... 13 Job Opportunities ............................................................................................................................................... 14 Point of View • The discovery of haploidy and diploidy in bryophytes................................................................................ 14 Research News • Genetic diversity of a forest bryophyte, Dicranum viride (Sull. & Lesq.) Lindb. ...................................... 15 Bryological Techniques • Bryological investigation of two mounting media ..................................................................................... -
Wikstrom2009chap13.Pdf
Liverworts (Marchantiophyta) Niklas Wikströma,*, Xiaolan He-Nygrénb, and our understanding of phylogenetic relationships among A. Jonathan Shawc major lineages and the origin and divergence times of aDepartment of Systematic Botany, Evolutionary Biology Centre, those lineages. Norbyvägen 18D, Uppsala University, Norbyvägen 18D 75236, Altogether, liverworts (Phylum Marchantiophyta) b Uppsala, Sweden; Botanical Museum, Finnish Museum of Natural comprise an estimated 5000–8000 living species (8, 9). History, University of Helsinki, P.O. Box 7, 00014 Helsinki, Finland; Early and alternative classiA cations for these taxa have cDepartment of Biology, Duke University, Durham, NC 27708, USA *To whom correspondence should be addressed (niklas.wikstrom@ been numerous [reviewed by Schuster ( 10)], but the ebc.uu.se) arrangement of terminal taxa (species, genera) into lar- ger groups (e.g., families and orders) based on morpho- logical criteria alone began in the 1960s and 1970s with Abstract the work of Schuster (8, 10, 11) and Schljakov (12, 13), and culminated by the turn of the millenium with the work Liverworts (Phylum Marchantiophyta) include 5000–8000 of Crandall-Stotler and Stotler (14). 7 ree morphological species. Phylogenetic analyses divide liverworts into types of plant bodies (gametophytes) have generally been Haplomitriopsida, Marchantiopsida, and Jungerman- recognized and used in liverwort classiA cations: “com- niopsida. Complex thalloids are grouped with Blasiales in plex thalloids” including ~6% of extant species diversity Marchantiopsida, and leafy liverworts are grouped with and with a thalloid gametophyte that is organized into Metzgeriidae and Pelliidae in Jungermanniopsida. The distinct layers; “leafy liverworts”, by far the most speci- timetree shows an early Devonian (408 million years ago, ose group, including ~86% of extant species diversity and Ma) origin for extant liverworts. -
BRYOPHYTES .Pdf
Diversity of Microbes and Cryptogams Bryophyta Geeta Asthana Department of Botany, University of Lucknow, Lucknow – 226007 India Date of submission: May 11, 2006 Version: English Significant Key words: Bryophyta, Hepaticopsida (Liverworts), Anthocerotopsida (Hornworts), , Bryopsida (Mosses). 1 Contents 1. Introduction • Definition & Systematic Position in the Plant Kingdom • Alternation of Generation • Life-cycle Pattern • Affinities with Algae and Pteridophytes • General Characters 2. Classification 3. Class – Hepaticopsida • General characters • Classification o Order – Calobryales o Order – Jungermanniales – Frullania o Order – Metzgeriales – Pellia o Order – Monocleales o Order – Sphaerocarpales o Order – Marchantiales – Marchantia 4. Class – Anthocerotopsida • General Characters • Classification o Order – Anthocerotales – Anthoceros 5. Class – Bryopsida • General Characters • Classification o Order – Sphagnales – Sphagnum o Order – Andreaeales – Andreaea o Order – Takakiales – Takakia o Order – Polytrichales – Pogonatum, Polytrichum o Order – Buxbaumiales – Buxbaumia o Order – Bryales – Funaria 6. References 2 Introduction Bryophytes are “Avascular Archegoniate Cryptogams” which constitute a large group of highly diversified plants. Systematic position in the plant kingdom The plant kingdom has been classified variously from time to time. The early systems of classification were mostly artificial in which the plants were grouped for the sake of convenience based on (observable) evident characters. Carolus Linnaeus (1753) classified -
Mosses, Liverworts, Hornworts)
Bryophyte Phylogeny Poster Systematics and Characteristics of Nonvascular Land Plants (Mosses, Liverworts, Hornworts) Bryophyte Phylogeny Anacrogynous. Lvs in three rows (2 lateral, succubous, 1 dorsal lobule) Poster Oil bodies scattered. Mucilage on ventral surface CS parenchymatous, with glomerophycotean fungus Di- or monoicous. Single S per gynoecium. Gemmae in axils of dorsal lobules Treubiales Treubiaceae Tracheophyte Subterranean axis. Lvs mostly isophyllous. Rhizoids – shoot calyptra + CS +, cells thin-walled, perforated Phylogeny Di- or monoicous. Gametangia lateral, bracts –. Seta massive Poster Blepharoplast: lamellar strip and spline < 90 microtubules, aperture on left side. Several S/gynoecium CAP 4-valved; walls unistratose. Elaterophore basal. Elaters filamentous. Asex. repro. – Haplomitriales Haplomitriaceae Thalli winged ("leafy"), 2 ventral scale rows. Air chambers –, gametangiophores – Ventral "auricles" with Nostoc. Dioicous. AN dorsal, solitary. AR dorsal, behind apex Angiosperm Blepharoplast: marchantialean. CAP 4(-6)-valved Phylogeny Elaters 2-helical. Elaterophore basal, rudimentary Gemmae receptacles flasked-shaped (unique in liverworts) Blasiaceae Poster Blasiales Air chambers +, chlorophyllose filaments – Rhizoids smooth MARCHANTIIDAE Ventral scales +, appendages – Archegoniophores branched Liverworts Gemmae Neohodgsoniales Neohodgsoniaceae Thalli rosettes or stems; axes: winged or lobes leaf-like thallose or foliose Air chambers –, mucilage cells –, pores – rhizoids + AR and S in pear-shaped involucres (dorsal -
Biodiversity of the Hypersaline Urmia Lake National Park (NW Iran)
Diversity 2014, 6, 102-132; doi:10.3390/d6020102 OPEN ACCESS diversity ISSN 1424-2818 www.mdpi.com/journal/diversity Review Biodiversity of the Hypersaline Urmia Lake National Park (NW Iran) Alireza Asem 1,†,*, Amin Eimanifar 2,†,*, Morteza Djamali 3, Patricio De los Rios 4 and Michael Wink 2 1 Institute of Evolution and Marine Biodiversity, Ocean University of China, Qingdao 266003, China 2 Institute of Pharmacy and Molecular Biotechnology (IPMB), Heidelberg University, Im Neuenheimer Feld 364, Heidelberg D-69120, Germany; E-Mail: [email protected] 3 Institut Méditerranéen de Biodiversité et d'Ecologie (IMBE: UMR CNRS 7263/IRD 237/Aix- Marseille Université), Europôle Méditerranéen de l'Arbois, Pavillon Villemin BP 80, 13545, Aix-en Provence Cedex 04, France; E-Mail: [email protected] 4 Environmental Sciences School, Natural Resources Faculty, Catholic University of Temuco, Casilla 15-D, Temuco 4780000, Chile; E-Mail: [email protected] † These authors contributed equally to this work. * Authors to whom correspondence should be addressed; E-Mails: [email protected] (A.A.); [email protected] (A.E.); Tel.: +86-150-6624-4312 (A.A.); Fax: +86-532-8203-2216 (A.A.); Tel.: +49-6221-544-880 (A.E.); Fax: +49-6221-544-884 (A.E.). Received: 3 December 2013; in revised form: 13 January 2014 / Accepted: 27 January 2014 / Published: 10 February 2014 Abstract: Urmia Lake, with a surface area between 4000 to 6000 km2, is a hypersaline lake located in northwest Iran. It is the saltiest large lake in the world that supports life. Urmia Lake National Park is the home of an almost endemic crustacean species known as the brine shrimp, Artemia urmiana. -
The Thallose Liverworts of California
THE THALLOSE LIVERWORTS OF CALIFORNIA A Thesis Presented to the Graduate Faculty of Humboldt State University In Partial Fuifiliment of the Requirements for the Degree Master of Arts By Alan Whittemore May 1982 THE THALLOSE LIVERWORTS OF CALIFORNIA By Alan T. Whittemore Approved: Date: INTRODUCTION Since the first representative collections of California liverworts were made over a century ago, the state has been known for the diversity of morphological types it contains. The important patterns in most higher taxa are present and often abundantly represented (Campbell, 1938), a situation particularly striking when compared with the cool-temperate areas of northeastern North America and northern Europe where most hepatic taxonomists have worked. These areas are poor in several groups, including most of the large order Marchantiales. While the pioneer- ing publications of Howe (1899) and Campbell (1895) stim- ulated a number of California collectors and morphologists to study the local hepatics in the first half of this century, these books were not adequately revised or replaced and study of this group virtually stopped. Works published in eastern North America and Europe, such as those of Schuster (1966-81), Macvicar (1926), and Mueller (1952- 58) are useful for the identification of California's leafy hepatics, but the large Marchantiales which form such a conspicuous and distinctive part of our flora are mostly absent from these areas, and are thus difficult to 2 identify. Furthermore, workers from these areas, who have no need to make distinctions among many species in these groups, and who often lack access to abundant material, have failed to describe many taxonomically useful charac- ters, particularly in the vegetative thallus of the Marchantiales. -
The Bryological Times Number 126 November 2008
______________________________________________________________________________________________________ The Bryological Times Number 126 November 2008 Newsletter of the International Association of Bryologists CONTENT IAB News • The IAB-congress 2009 in South Africa: an update ...................................................................................... 2 • Stanley W. Greene Award: call for proposals ............................................................................................... 2 • The IAB seeks new candidates and active collaborators ............................................................................. 2 Personal News ....................................................................................................................................................... 3 Field Research News • Post IAB 2007 conference field trip to the Cameron Highlands ................................................................... 3 Research Reports • Bryolat project ................................................................................................................................................... 5 • Herbarium news from Michigan ...................................................................................................................... 5 Theses in bryology ................................................................................................................................................. 6 Bryological exhibition ........................................................................................................................................... -
Bryophyte Biology Second Edition
This page intentionally left blank Bryophyte Biology Second Edition Bryophyte Biology provides a comprehensive yet succinct overview of the hornworts, liverworts, and mosses: diverse groups of land plants that occupy a great variety of habitats throughout the world. This new edition covers essential aspects of bryophyte biology, from morphology, physiological ecology and conservation, to speciation and genomics. Revised classifications incorporate contributions from recent phylogenetic studies. Six new chapters complement fully updated chapters from the original book to provide a completely up-to-date resource. New chapters focus on the contributions of Physcomitrella to plant genomic research, population ecology of bryophytes, mechanisms of drought tolerance, a phylogenomic perspective on land plant evolution, and problems and progress of bryophyte speciation and conservation. Written by leaders in the field, this book offers an authoritative treatment of bryophyte biology, with rich citation of the current literature, suitable for advanced students and researchers. BERNARD GOFFINET is an Associate Professor in Ecology and Evolutionary Biology at the University of Connecticut and has contributed to nearly 80 publications. His current research spans from chloroplast genome evolution in liverworts and the phylogeny of mosses, to the systematics of lichen-forming fungi. A. JONATHAN SHAW is a Professor at the Biology Department at Duke University, an Associate Editor for several scientific journals, and Chairman for the Board of Directors, Highlands Biological Station. He has published over 130 scientific papers and book chapters. His research interests include the systematics and phylogenetics of mosses and liverworts and population genetics of peat mosses. Bryophyte Biology Second Edition BERNARD GOFFINET University of Connecticut, USA AND A.