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Multidimensional Analysis of Extended Molecular Dynamics Simulations Shows the Complexity of Signal
bioRxiv preprint doi: https://doi.org/10.1101/604793; this version posted April 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. TITLE Multidimensional analysis of extended molecular dynamics simulations shows the complexity of signal transduction by the histamine H3 membrane receptor Short title: Molecular dynamics of signal transduction AUTHORS Herrera-Zuniga LD1,4, Moreno-Vargas LM2,4, Correa-Basurto J1,3, Prada D2, Curmi P1, Arrang, JM4, Maroun, RC1,4* 1 SABNP, UMR-S U1204, INSERM/Université d’Evry-Val d’Essonne/Université Paris-Saclay, 91025 Evry, FRANCE 2 Computational Biology and Drug Design Research Unit. Federico Gomez Children's Hospital of Mexico City, MEXICO 3 Laboratory for the Design and Development of New Drugs and Biotechnological Innovation) SEPI-ESM, MEXICO 4 INSERM U894, Paris, FRANCE *Corresponding author 1 bioRxiv preprint doi: https://doi.org/10.1101/604793; this version posted April 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. ABSTRACT In this work, we study the mechanisms of activation and inactivation of signal transduction by the histamine H3 receptor (H3R), a 7TM GPCR through extended molecular dynamics (MD) simulations of the receptor embedded in a hydrated double layer of dipalmitoyl phosphatidyl choline (DPPC), a zwitterionic poly-saturated ordered lipid. Three systems were prepared: the apo H3R, representing the constitutively active receptor; and the holo-systems: the H3R coupled to an antagonist/inverse agonist (ciproxifan) and representing the inactive state of the receptor; and the H3R coupled to the endogenous agonist histamine and representing the active state of the receptor. -
Histamine Receptors
Tocris Scientific Review Series Tocri-lu-2945 Histamine Receptors Iwan de Esch and Rob Leurs Introduction Leiden/Amsterdam Center for Drug Research (LACDR), Division Histamine is one of the aminergic neurotransmitters and plays of Medicinal Chemistry, Faculty of Sciences, Vrije Universiteit an important role in the regulation of several (patho)physiological Amsterdam, De Boelelaan 1083, 1081 HV, Amsterdam, The processes. In the mammalian brain histamine is synthesised in Netherlands restricted populations of neurons that are located in the tuberomammillary nucleus of the posterior hypothalamus.1 Dr. Iwan de Esch is an assistant professor and Prof. Rob Leurs is These neurons project diffusely to most cerebral areas and have full professor and head of the Division of Medicinal Chemistry of been implicated in several brain functions (e.g. sleep/ the Leiden/Amsterdam Center of Drug Research (LACDR), VU wakefulness, hormonal secretion, cardiovascular control, University Amsterdam, The Netherlands. Since the seventies, thermoregulation, food intake, and memory formation).2 In histamine receptor research has been one of the traditional peripheral tissues, histamine is stored in mast cells, eosinophils, themes of the division. Molecular understanding of ligand- basophils, enterochromaffin cells and probably also in some receptor interaction is obtained by combining pharmacology specific neurons. Mast cell histamine plays an important role in (signal transduction, proliferation), molecular biology, receptor the pathogenesis of various allergic conditions. After mast cell modelling and the synthesis and identification of new ligands. degranulation, release of histamine leads to various well-known symptoms of allergic conditions in the skin and the airway system. In 1937, Bovet and Staub discovered compounds that antagonise the effect of histamine on these allergic reactions.3 Ever since, there has been intense research devoted towards finding novel ligands with (anti-) histaminergic activity. -
PROKR2 Gene Prokineticin Receptor 2
PROKR2 gene prokineticin receptor 2 Normal Function The PROKR2 gene provides instructions for making a protein called prokineticin receptor 2. This receptor interacts with a protein called prokineticin 2 (produced from the PROK2 gene). On the cell surface, prokineticin 2 attaches to the receptor like a key in a lock. When the two proteins are connected, they trigger a series of chemical signals within the cell that regulate various cell functions. Prokineticin 2 and its receptor are produced in many organs and tissues, including the small intestine, certain regions of the brain, and several hormone-producing (endocrine) tissues. Prokineticin 2 and its receptor play a role in the development of a group of nerve cells that are specialized to process smells (olfactory neurons). These neurons move ( migrate) from the developing nose to a structure in the front of the brain called the olfactory bulb, which is critical for the perception of odors. Prokineticin 2 and its receptor are also involved in the migration of nerve cells that produce gonadotropin-releasing hormone (GnRH). GnRH controls the production of several hormones that direct sexual development before birth and during puberty. These hormones are also important for the normal function of the ovaries in women and the testes in men. Several additional functions of prokineticin 2 and its receptor have been discovered. These proteins help stimulate the movement of food through the intestine and are likely involved in the formation of new blood vessels (angiogenesis). They also play a role in coordinating daily (circadian) rhythms, such as the sleep-wake cycle and regular changes in body temperature. -
Histamine Inhibits the Production of Interleukin-12 Through Interaction with H2 Receptors
Histamine inhibits the production of interleukin-12 through interaction with H2 receptors. T C van der Pouw Kraan, … , R Leurs, L A Aarden J Clin Invest. 1998;102(10):1866-1873. https://doi.org/10.1172/JCI3692. Research Article IL-12 is essential for T helper 1 (Th1) development and inhibits the induction of Th2 responses. Atopic diseases, which are characterized by Th2 responses, are associated with the overproduction of histamine. Here we present evidence that histamine, at physiological concentrations, strongly inhibits human IL-12 p40 and p70 mRNA and protein production by human monocytes. The use of specific histamine receptor antagonists reveals that this inhibition is mediated via the H2 receptor and induction of intracellular cAMP. The inhibition of IL-12 production is independent of IL-10 and IFN-gamma. The observation that histamine strongly reduces the production of the Th1-inducing cytokine IL-12 implies a positive feedback mechanism for the development of Th2 responses in atopic patients. Find the latest version: https://jci.me/3692/pdf Histamine Inhibits the Production of Interleukin-12 through Interaction with H2 Receptors Tineke C.T.M. van der Pouw Kraan,* Alies Snijders,‡ Leonie C.M. Boeije,* Els R. de Groot,* Astrid E. Alewijnse,§ Rob Leurs,§ and Lucien A. Aarden* *CLB, Sanquin Blood Supply Foundation, Department of Auto-Immune Diseases, Laboratory for Experimental and Clinical Immunology, Academic Medical Centre, University of Amsterdam, 1066CX Amsterdam, The Netherlands; ‡Laboratory of Cell Biology and Histology, Academic Medical Centre, 1105 AZ Amsterdam, The Netherlands; and §Department of Pharmacochemistry, Free University, Leiden/Amsterdam Centre for Drug Research, 1081 HV Amsterdam, The Netherlands Abstract a Th2 response (4–6), while various organ-specific autoim- mune diseases are characterized by Th1-like responses (7). -
(12) Patent Application Publication (10) Pub. No.: US 2016/0220580 A1 Rubin Et Al
US 2016O220580A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2016/0220580 A1 Rubin et al. (43) Pub. Date: Aug. 4, 2016 (54) SMALL MOLECULESCREENING FOR (60) Provisional application No. 61/497,708, filed on Jun. MOUSE SATELLITE CELL PROLIFERATION 16, 2011. (71) Applicant: PRESIDENT AND FELLOWS OF Publication Classification HARVARD COLLEGE, Cambridge, (51) Int. Cl. MA (US) A 6LX3/553 (2006.01) (72) Inventors: Lee L. Rubin, Wellesley, MA (US); A613 L/496 (2006.01) Amanda Gee, Alexandria, VA (US); A613 L/4439 (2006.01) Amy J. Wagers, Cambridge, MA (US) A613 L/404 (2006.01) (52) U.S. Cl. CPC ............. A6 IK3I/553 (2013.01); A61 K3I/404 (21) Appl. No.: 15/012,656 (2013.01); A61 K3I/496 (2013.01); A61 K 31/4439 (2013.01) (22) Filed: Feb. 1, 2016 (57) ABSTRACT The invention provides methods for inducing, enhancing or Related U.S. Application Data increasing satellite cell proliferation, and an assay for screen (63) Continuation-in-part of application No. 14/126,716, ing for a candidate compound for inducing, enhancing or filed on Jun. 13, 2014, now Pat. No. 9.248,185, filed as increasing satellite cell proliferation. Also provided are meth application No. PCT/US2012/042964 on Jun. 18, ods for repairing or regenerating a damaged muscle tissue of 2012. a Subject. Patent Application Publication Aug. 4, 2016 Sheet 1 of 44 US 2016/0220580 A1 FIG. A Patent Application Publication Aug. 4, 2016 Sheet 2 of 44 US 2016/0220580 A1 FIG. C. FIG. 2A Patent Application Publication Aug. -
Evaluation of Anxiolytic Effects of Aripiprazole and Hydroxyzine As a Combination in Mice
Original Article Evaluation of anxiolytic effects of aripiprazole and hydroxyzine as a combination in mice Abstract Context: Anxiety disorders are chronic, common, and often comorbid. There is an unmet need in its treatment. Aripiprazole and hydroxyzine are well‑known therapeutic options used as monotherapy in clinics. They have different mechanisms and site of actions. Aim: The objective of the present study was to evaluate the anxiolytic effect of aripiprazole and hydroxyzine in combination. Materials and Methods: Swiss albino mice (male) received treatment of 5% of Tween 80 in 0.9% saline (10 ml/kg; control group), “aripiprazole alone” (1 mg/kg), “hydroxyzine alone” (3 mg/kg), and aripiprazole (0.5 mg/kg) + hydroxyzine (1.5 mg/kg) through the intraperitoneal route. Statistical Analysis Used: statistical analysis. One‑way ANOVA followed by Tukey’s honest significant difference was employed for Results: The in vivo outcomes (elevated plus maze, light/dark transition, and marble burying tests) of was found to be better than control and aripiprazole‑treated groups. The combination‑treated group showed hydroxyzine monotherapy‑treated group showed a significant anxiolytic activity. The combination‑treated group group but not better than the hydroxyzine group. The in vitro results were in compliance with the in vivo results. a significant increase in the level of serotonin in different brain regions as compared to aripiprazole‑treated monotherapy. However, hydroxyzine showed better anxiolytic activity when compared to control, aripiprazole The combinational approach was found to be beneficial in anxiolytic treatment as compared to aripiprazole monotherapy, and combination groups. Conclusions: The anxiolytic effect of combination‑treated group was found to be better than aripiprazole monotherapy and lesser than hydroxyzine monotherapy. -
United States Patent (10) Patent No.: US 8,859,550 B2 Chen Et Al
US00885955OB2 (12) United States Patent (10) Patent No.: US 8,859,550 B2 Chen et al. (45) Date of Patent: *Oct. 14, 2014 (54) HETEROCYCLIC INHIBITORS OF FOREIGN PATENT DOCUMENTS HISTAMINE RECEPTORS FOR THE TREATMENT OF DISEASE Wo 2004:36 A 358 (75) Inventors: Pingyun Chen, Chapel Hill, NC (US); W. SS: A. 33. Stephen A. R. Carino, Del Mar, CA WO 2009098320 A2 8, 2009 (US); Ricky Wayne Couch, Durham, WO 2010030785 A2 3, 2010 NC (US); Daniel S. Kinder, Del Mar, W. 38H 73 A. 338 sS); Beth A. Norton, Del Mar, CA WO 20110894.00 A1 7, 2011 (73) Assignee: Kalypsys, Inc., Del Mar, CA (US) OTHER PUBLICATIONS c Khankari et al. Thermochimica Acta 1995, 248, 61-79. (*) Notice: Subject to any disclaimer, the term of this Conalty, M.L. et akl., “Anticancer agents—XII. Pyridazine and patent is extended or adjusted under 35 Benzodiazine derivatives.” Proceedings of the Royal Irish Academy, U.S.C. 154(b) by O days. Section B: Biological, Geological and Chemical Science (1976), 76(10), 151-63. This patent is Subject to a terminal dis- Kim, HS et al., “Synthesis of tetrazolo 1.5-aquinoxalines with anti Ca10. microbial activity,” Journal of the Korean Chemical Society (2001), 45(4), 325-333. (21) Appl. No.: 13/606.947 Smits R. A. et al., “Major advances in the developments of histamine H4 receptor ligands.” Drug Discovery Today, vol. 14, No. 15/16, Aug. (22) Filed: Sep. 7, 2012 2009. Beres M. et al., “Ring Opening of 1.2.3Triazolo 1.5- (65) Prior Publication Data alpha pyrazinium Salts: Synthesis and Some Transformations of a US 2013/0245001A1 Sep. -
Die Rolle Der Duralen Mastzellen Im Maus Migräne-Modell = the Role Of
Die Rolle der duralen Mastzellen im Maus Migräne-Modell Dissertation zur Erlangung des Grades eines Doktors der Naturwissenschaften der Fakultät für Biologie und Biotechnologie der Ruhr-Universität Bochum Internationale Graduiertenschule Biowissenschaften Ruhr-Universität Bochum (Lehrstuhl für Tierphysiologie) Vorgelegt von Elisabeth Dlugosch Aus Recklinghausen Bochum Oktober, 2017 Referent: Prof. Dr. Hermann Lübbert Korreferent: Prof. Dr. Stefan Herlitze The role of dural mast cells in a murine migraine model Dissertation to obtain the degree Doctor Rerum Naturalium (Dr. rer. nat.) at the Faculty of Biology und Biotechnology Ruhr University Bochum International Graduate School of Biosciences Ruhr University Bochum (Department of Animal Physiology) Submitted by Elisabeth Dlugosch From Recklinghausen Bochum October 2017 First Supervisor: Prof. Dr. Hermann Lübbert Second Supervisor: Prof. Dr. Stefan Herlitze Danksagung Danksagung Ich danke Herrn Prof. Dr. Hermann Lübbert für die Überlassung des Themas, die Bereitstellung des Arbeitsplatzes am Lehrstuhl für Tierphysiologie, sowie den fachlichen Rat. Mein Dank gilt auch Herrn Prof. Dr. Stefan Herlitze für die Übernahme des Korreferats. Des Weiteren möchte ich mich bei Herrn Dr. Frank Paris, Herrn Dr. Michael Andriske und Herrn Dr. Xinran Zhu für die wertvollen Tipps und fachliche Kritik bedanken. Außerdem möchte ich mich noch bei Tanja Behning für den technischen Support bedanken, Manfred Ebbinghaus für seine Hilfe bei den Hypoxie-Kammern, Maria Josten für die Hilfe bei der Zellkultur und Katja Schmidtke für die Hilfe bei den PCRs. Ein weiterer Dank geht an Frau Dr. Miriam Kremser und Herrn Dr. Daniel Segelcke für die hilfreichen Anregungen bei meiner Dissertation. Ein großer Dank gilt auch allen Mitarbeitern und Studenten des Lehrstuhls für Tierphysiologie für die tolle Arbeitsatmosphäre und all die lustigen Gespräche, die wir über die Zeit geführt haben. -
Adenylyl Cyclase 2 Selectively Regulates IL-6 Expression in Human Bronchial Smooth Muscle Cells Amy Sue Bogard University of Tennessee Health Science Center
University of Tennessee Health Science Center UTHSC Digital Commons Theses and Dissertations (ETD) College of Graduate Health Sciences 12-2013 Adenylyl Cyclase 2 Selectively Regulates IL-6 Expression in Human Bronchial Smooth Muscle Cells Amy Sue Bogard University of Tennessee Health Science Center Follow this and additional works at: https://dc.uthsc.edu/dissertations Part of the Medical Cell Biology Commons, and the Medical Molecular Biology Commons Recommended Citation Bogard, Amy Sue , "Adenylyl Cyclase 2 Selectively Regulates IL-6 Expression in Human Bronchial Smooth Muscle Cells" (2013). Theses and Dissertations (ETD). Paper 330. http://dx.doi.org/10.21007/etd.cghs.2013.0029. This Dissertation is brought to you for free and open access by the College of Graduate Health Sciences at UTHSC Digital Commons. It has been accepted for inclusion in Theses and Dissertations (ETD) by an authorized administrator of UTHSC Digital Commons. For more information, please contact [email protected]. Adenylyl Cyclase 2 Selectively Regulates IL-6 Expression in Human Bronchial Smooth Muscle Cells Document Type Dissertation Degree Name Doctor of Philosophy (PhD) Program Biomedical Sciences Track Molecular Therapeutics and Cell Signaling Research Advisor Rennolds Ostrom, Ph.D. Committee Elizabeth Fitzpatrick, Ph.D. Edwards Park, Ph.D. Steven Tavalin, Ph.D. Christopher Waters, Ph.D. DOI 10.21007/etd.cghs.2013.0029 Comments Six month embargo expired June 2014 This dissertation is available at UTHSC Digital Commons: https://dc.uthsc.edu/dissertations/330 Adenylyl Cyclase 2 Selectively Regulates IL-6 Expression in Human Bronchial Smooth Muscle Cells A Dissertation Presented for The Graduate Studies Council The University of Tennessee Health Science Center In Partial Fulfillment Of the Requirements for the Degree Doctor of Philosophy From The University of Tennessee By Amy Sue Bogard December 2013 Copyright © 2013 by Amy Sue Bogard. -
Programme and Abstracts Book
0 33. Annual Meeting European Histamine Research Society 28. April – 2. May 2004 Düsseldorf / Köln, Germany 1 Dear Histaminologists 28. April 2004 Welcome to the 33rd Annual Meeting of the European Histamine Research Society at the Kardinal Schulte Haus near Cologne. Many of you have seen Cologne at the occasion of the 1993 meeting. The host institution is now located 30 km to the north: Department of Neurophysiology, Heinrich-Heine-University, Düsseldorf. Heinrich Heine, the patron of our University and one of our major poets, was born in Düsseldorf in 1797, he died in Paris in 1856. He wrote romantic poems often with a unique and unusual ironic or disillusioning twist at the end. He was the founder of the modern feuilleton and wrote a bit caustic about his birthplace. Nevertheless, Düsseldorf is worth a visit, there is interesting recent architecture (e.g. O’Gehry) a fine art collection (20th century) and a jewel in the south: Benrath castle and park (1777). We meet at the south end of “Bergisches Land” that we will explore during our excursion. The chemical industry founded by Bayer and Leverkus is around us: Leverkusen and Wuppertal. Düsseldorf is a village (1/2 Mio inhabitants) located at the mouth of the river Düssel into the Rhine. A formerly romantic part of the Düssel-valley has been praised by the 17th century pastor Neander and is consequently called the Neanderthal, the valley where the first bones of the Neandertal-man were found in 1856. Schloss Burg is a mediaeval castle, its 12th century appearance has been restored and a museum recalls the long bygone times. -
CEL MAI KO NA NA NA NA NA (12 ) United States Patent ( 10 ) Patent No
US010064856B2CEL MAI KO NA NA NA NA NA (12 ) United States Patent ( 10 ) Patent No. : US 10 , 064 ,856 B2 Bosse et al. ( 45 ) Date of Patent: * Sep . 4 , 2018 ( 54 ) PHARMACEUTICAL COMPOSITIONS (52 ) U .S . CI. ??? . .. A61K 31/ 485 ( 2013 .01 ) ; A61K 9 / 209 @(71 ) Applicant : LOCL PHARMA , INC . , Las Vegas , ( 2013 . 01 ) ; A61K 9 / 2013 ( 2013 . 01 ) ; A61K NV ( US ) 9 /2027 ( 2013 .01 ) ; A61K 9 / 2054 ( 2013 .01 ) ; A61K 9 / 4808 ( 2013 .01 ) ; A61K 31 / 165 @(72 ) Inventors : Paul Bosse, Jupiter , FL (US ) ; John ( 2013 .01 ) ; A61K 31/ 167 ( 2013 .01 ) ; A61K Ameling , Jupiter, FL (US ) ; Bernard 31/ 24 ( 2013 .01 ) ; A6IK 31/ 403 ( 2013 .01 ) ; Schachtel, Jupiter, FL (US ) ; Ray A61K 31/ 404 (2013 .01 ) ; A61K 31 /4196 Takigiku , Loveland , OH (US ) ( 2013 . 01 ) ; A61K 31/ 422 ( 2013 . 01 ) ; A61K 31 / 437 ( 2013 .01 ) ; A61K 31/ 454 ( 2013 .01 ) ; @( 73 ) Assignee : LOCAL PHARMA , INC ., Las Vegas , A61K 31 /515 ( 2013 . 01 ) ; A61K 31/ 522 ( 2013 . 01 ) ; A61K 31 /5415 ( 2013 .01 ) ; A61K NV (US ) 45 / 06 ( 2013 .01 ) ; A61K 9 / 0024 ( 2013 .01 ) ; @( * ) Notice : Subject to any disclaimer , the term of this A61K 9 / 0056 ( 2013 . 01 ) ; A61K 9 / 1694 patent is extended or adjusted under 35 ( 2013 . 01 ) ; A61K 9 /2086 ( 2013 . 01 ) ; A61K U . S . C . 154 (b ) by 0 days . 47 / 36 ( 2013 .01 ) (58 ) Field of Classification Search This patent is subject to a terminal dis None claimer . See application file for complete search history . ( 21 ) Appl. No .: 15 / 683, 635 ( 56 ) References Cited ( 22 ) Filed : Aug . 22, 2017 U . S . PATENT DOCUMENTS 3 ,048 , 526 A 8 / 1962 Boswell (65 ) Prior Publication Data 3 , 108 , 046 A 10 / 1963 Harbit 3 , 536 ,809 A 10 / 1970 Norman US 2017 /0348303 A1 Dec . -
PROK2 Gene Prokineticin 2
PROK2 gene prokineticin 2 Normal Function The PROK2 gene provides instructions for making a protein called prokineticin 2. This protein interacts with another protein called prokineticin receptor 2 (produced from the PROKR2 gene). On the cell surface, prokineticin 2 attaches (binds) to the receptor like a key in a lock. When the two proteins are connected, they trigger a series of chemical signals within the cell that regulate various cell functions. Prokineticin 2 and its receptor are produced in many organs and tissues, including the small intestine, certain regions of the brain, and several hormone-producing (endocrine) tissues. Prokineticin 2 and its receptor play a role in the development of a group of nerve cells that are specialized to process smells (olfactory neurons). These neurons move ( migrate) from the developing nose to a structure in the front of the brain called the olfactory bulb, which is critical for the perception of odors. Prokineticin 2 and its receptor are also involved in the migration of nerve cells that produce gonadotropin-releasing hormone (GnRH). GnRH controls the production of several hormones that direct sexual development before birth and during puberty. These hormones are also important for the normal function of the ovaries in women and the testes in men. Several additional functions of prokineticin 2 and its receptor have been discovered. These proteins help stimulate the movement of food through the intestine and are likely involved in the formation of new blood vessels (angiogenesis). They also play a role in coordinating daily (circadian) rhythms, such as the sleep-wake cycle and regular changes in body temperature.