Dynamics of Fish Diversity Across an Environmental Gradient in the Seribu Islands Reefs Off Jakarta
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Petition to List Eight Species of Pomacentrid Reef Fish, Including the Orange Clownfish and Seven Damselfish, As Threatened Or Endangered Under the U.S
BEFORE THE SECRETARY OF COMMERCE PETITION TO LIST EIGHT SPECIES OF POMACENTRID REEF FISH, INCLUDING THE ORANGE CLOWNFISH AND SEVEN DAMSELFISH, AS THREATENED OR ENDANGERED UNDER THE U.S. ENDANGERED SPECIES ACT Orange Clownfish (Amphiprion percula) photo by flickr user Jan Messersmith CENTER FOR BIOLOGICAL DIVERSITY SUBMITTED SEPTEMBER 13, 2012 Notice of Petition Rebecca M. Blank Acting Secretary of Commerce U.S. Department of Commerce 1401 Constitution Ave, NW Washington, D.C. 20230 Email: [email protected] Samuel Rauch Acting Assistant Administrator for Fisheries NOAA Fisheries National Oceanographic and Atmospheric Administration 1315 East-West Highway Silver Springs, MD 20910 E-mail: [email protected] PETITIONER Center for Biological Diversity 351 California Street, Suite 600 San Francisco, CA 94104 Tel: (415) 436-9682 _____________________ Date: September 13, 2012 Shaye Wolf, Ph.D. Miyoko Sakashita Center for Biological Diversity Pursuant to Section 4(b) of the Endangered Species Act (“ESA”), 16 U.S.C. § 1533(b), Section 553(3) of the Administrative Procedures Act, 5 U.S.C. § 553(e), and 50 C.F.R.§ 424.14(a), the Center for Biological Diversity hereby petitions the Secretary of Commerce and the National Oceanographic and Atmospheric Administration (“NOAA”), through the National Marine Fisheries Service (“NMFS” or “NOAA Fisheries”), to list eight pomacentrid reef fish and to designate critical habitat to ensure their survival. The Center for Biological Diversity (“Center”) is a non-profit, public interest environmental organization dedicated to the protection of imperiled species and their habitats through science, policy, and environmental law. The Center has more than 350,000 members and online activists throughout the United States. -
Biodiversity of Shallow Reef Fish Assemblages in Western Australia Using a Rapid Censusing Technique
Records of the Western Australian Museum 20: 247-270 (2001). Biodiversity of shallow reef fish assemblages in Western Australia using a rapid censusing technique J. Harry Hutchins Department of Aquatic Zoology, Western Australian Museum, Francis Street, Perth, Western Australia 6000, Australia email: [email protected] Abstract -A rapid assessment methodology was used to provide relative abundance data on selected families of Western Australian fishes. Twenty shallow water reef sites were surveyed covering the coastline between the Recherche Archipelago in the south east and the Kimberley in the north. Three groups of atolls located off the Kimberley coast were also included. Eighteen families that best represent the State's nearshore reef fish fauna were targeted. They are: Serranidae, Caesionidae, Lu~anidae, Haemulidae, Lethrinidae, Mullidae, Pempherididae, Kyphosidae, Girellidae, Scorpididae, Chaetodontidae, Pomacanthidae, Pomacentridae, Cheilodactylidae, Labridae, Odacidae, Acanthuridae, and Monacanthidae. Analysis of the dataset using a hierarchical classification technique indicates that four groups of reef fishes are present: a southwest assemblage, a northwest assemblage, an offshore atolls assemblage, and a Kimberley assemblage. The first assemblage is comprised mainly of temperate species, while the latter three are mostly tropical fishes; these two broader groupings narrowly overlap on the west coast between Kalbarri and the Houtman Abrolhos. Evidence of a wide zone of temperate/tropical overlap-as proposed by some previous studies-is not supported by this analysis, nor is the presence of a prominent subtropical fauna on the west coast. Ecological differences of the four assemblages are explored, as well as the impact by the Leeuwin Current on this arrangement. INTRODUCTION western and southern coasts of the State, but could Western Australia occupies about 23 degrees of only provide a brief comparison with other more latitude (12-35°5) covering a large and varied northern areas. -
Phylogeny of the Damselfishes (Pomacentridae) and Patterns of Asymmetrical Diversification in Body Size and Feeding Ecology
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.07.430149; this version posted February 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Phylogeny of the damselfishes (Pomacentridae) and patterns of asymmetrical diversification in body size and feeding ecology Charlene L. McCord a, W. James Cooper b, Chloe M. Nash c, d & Mark W. Westneat c, d a California State University Dominguez Hills, College of Natural and Behavioral Sciences, 1000 E. Victoria Street, Carson, CA 90747 b Western Washington University, Department of Biology and Program in Marine and Coastal Science, 516 High Street, Bellingham, WA 98225 c University of Chicago, Department of Organismal Biology and Anatomy, and Committee on Evolutionary Biology, 1027 E. 57th St, Chicago IL, 60637, USA d Field Museum of Natural History, Division of Fishes, 1400 S. Lake Shore Dr., Chicago, IL 60605 Corresponding author: Mark W. Westneat [email protected] Journal: PLoS One Keywords: Pomacentridae, phylogenetics, body size, diversification, evolution, ecotype Abstract The damselfishes (family Pomacentridae) inhabit near-shore communities in tropical and temperature oceans as one of the major lineages with ecological and economic importance for coral reef fish assemblages. Our understanding of their evolutionary ecology, morphology and function has often been advanced by increasingly detailed and accurate molecular phylogenies. Here we present the next stage of multi-locus, molecular phylogenetics for the group based on analysis of 12 nuclear and mitochondrial gene sequences from 330 of the 422 damselfish species. -
Trait Decoupling Promotes Evolutionary Diversification of The
Trait decoupling promotes evolutionary diversification of the trophic and acoustic system of damselfishes rspb.royalsocietypublishing.org Bruno Fre´de´rich1, Damien Olivier1, Glenn Litsios2,3, Michael E. Alfaro4 and Eric Parmentier1 1Laboratoire de Morphologie Fonctionnelle et Evolutive, Applied and Fundamental Fish Research Center, Universite´ de Lie`ge, 4000 Lie`ge, Belgium 2Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland Research 3Swiss Institute of Bioinformatics, Ge´nopode, Quartier Sorge, 1015 Lausanne, Switzerland 4Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA Cite this article: Fre´de´rich B, Olivier D, Litsios G, Alfaro ME, Parmentier E. 2014 Trait decou- Trait decoupling, wherein evolutionary release of constraints permits special- pling promotes evolutionary diversification of ization of formerly integrated structures, represents a major conceptual the trophic and acoustic system of damsel- framework for interpreting patterns of organismal diversity. However, few fishes. Proc. R. Soc. B 281: 20141047. empirical tests of this hypothesis exist. A central prediction, that the tempo of morphological evolution and ecological diversification should increase http://dx.doi.org/10.1098/rspb.2014.1047 following decoupling events, remains inadequately tested. In damselfishes (Pomacentridae), a ceratomandibular ligament links the hyoid bar and lower jaws, coupling two main morphofunctional units directly involved in both feeding and sound production. Here, we test the decoupling hypothesis Received: 2 May 2014 by examining the evolutionary consequences of the loss of the ceratomandib- Accepted: 9 June 2014 ular ligament in multiple damselfish lineages. As predicted, we find that rates of morphological evolution of trophic structures increased following the loss of the ligament. -
Conservation and Management of Ornamental Coral Reef Wildlife: Successes, Shortcomings, and Future Directions Q ⇑ Laura E
Biological Conservation 169 (2014) 225–237 Contents lists available at ScienceDirect Biological Conservation journal homepage: www.elsevier.com/locate/biocon Review Conservation and management of ornamental coral reef wildlife: Successes, shortcomings, and future directions q ⇑ Laura E. Dee a, Stephanie S. Horii a, Daniel J. Thornhill b, a Bren School of Environmental Science & Management, University of California, Santa Barbara, 2400 Bren Hall, Santa Barbara, CA 93106, USA b Department of Conservation Science and Policy, Defenders of Wildlife, 1130 17th Street NW, Washington, DC 20036, USA article info abstract Article history: Trade in ornamental coral reef wildlife supports a multi-million dollar industry but in some places threat- Received 23 August 2013 ens vulnerable coral reef species and ecosystems due to unsustainable practices and lack of effective reg- Received in revised form 12 November 2013 ulation. To supply this trade, fishers sometimes deplete fish populations and rely on practices, such as Accepted 14 November 2013 cyanide fishing, that harm coral reef organisms and habitats. The number of countries involved, dispersed fishing localities, and the diversity of species in trade present considerable impediments to conservation and management. For instance, traditional fisheries management techniques such as stock assessments Keywords: and total catch limits may not be feasible for ornamental fisheries, which are characterized by limited Aquarium trade data on population dynamics, stock status, and collection effort, as well as instances of illegal, underre- Coral reef conservation Coral reef fisheries ported, and unregulated fishing. A number of strategies to monitor, regulate, and manage the trade have Ornamental fisheries been implemented with varying efficacy. In order to learn from previous attempts and identify promising Sustainable fisheries management approaches, we reviewed selected management practices and regulations from diverse settings, with attention to the effectiveness of each approach. -
Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Ex-Situ Documentation of Ethnobiology
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by ScholarSpace at University of Hawai'i at Manoa Vol. 8 (2014), pp. 788–809 http://nflrc.hawaii.edu/ldc http://hdl.handle.net/10125/24626 Ex-situ Documentation of Ethnobiology Francesca Lahe-Deklin Australian National University Aung Si University of Melbourne Migrant speakers of endangered languages living in urban centers in developed coun- tries represent a valuable resource through which these languages may be conveniently documented. Here, we first present a general methodology by which linguists can com- pile a meaningful set of visual (and sometimes audio) stimuli with which to carry out a reasonably detailed ethnobiological elicitation session in an ‘ex-situ’ setting, such as an urban university. We then showcase some preliminary results of such an elicitation carried out on the Dumo, or Vanimo, language of north-western Papua New Guinea during a linguistic field methods course at the Australian National University. With the help of a region-specific set of visual stimuli obtained from various sources, it was possible to document many fascinating aspects of the fish, and other marine-biological, knowledge of Dumo speakers, along with detailed ethnographic notes on the cultural significance of marine creatures. 1. INTRODUCTION. Developed countries such as Australia and the United States of Amer- ica have, in recent decades, become home to numerous ethnic communities of speakers of small, inadequately described or endangered languages (Roberts 2010). The presence of large numbers of such migrants in major urban centers, such as New York, London, or Melbourne, provides exciting opportunities for collaborations between linguists and the speakers of endangered languages, wherein the former document the language of the latter without the great expense of having to travel to a distant, possibly remote, location. -
Philippines and Indonesia Marine Aquarium
29835 Public Disclosure Authorized GLOBAL ENVIRONMENTAL FACILITY Philippines and Indonesia Public Disclosure Authorized Marine Aquarium Market Transformation Initiative (MAMTI) Public Disclosure Authorized GEF Project Document January 2004 Public Disclosure Authorized KEY ACRONYMS AND TERMS ACF Asian Conservation Foundation ADB Asian Development Bank AKKII Indonesia Coral Shell and Ornamental Fish Association (Asosiasi Koral, Kerang, dan Ikan Hias Indonesia) BFAR Philippines Bureau of Fisheries and Aquatic Resources BFARMC Barangay Fisheries and Aquatic Resources Management Council BMT Bohol Marine Triangle BSAP Biodiversity Strategy and Action Plan Bupati Head of Regency in Indonesia CAMP Collection Area Management Plan (required by MAC EFM Standard) CAS Country Assistance Strategy CBD Convention of Biological Diversity CCIF Conservation and Community and Investment Forum CFH Collection, Fishing and Holding Standard (MAC Core Standard 2) CI Conservation International CITES Convention on International Trade in Endangered Species of Wild Fauna and Flora COREMAP Coral Reef Rehabilitation and Management Program CRM coastal resource management CRMP Coastal Resources Management Project DENR Philippines Department of Environment and Natural Resources DKP Indonesia Ministry of Marine Affairs and Fisheries (Departemen Kelautan dan Perikanan) EFM Ecosystem and Fishery Management (MAC Core Standard 1) FAO Philippines Fisheries Administrative Order FARMC Philippines Fisheries and Aquatic Resources Management Council FASPO Philippines DENR Foreign-Assisted -
Title Damselfishes of the Genus Amblyglyphidodon from Japan
Title Damselfishes of the Genus Amblyglyphidodon from Japan Author(s) Yoshino, Tetsuo; Tominaga, Chihiro; Okamoto, Kazuhiro 琉球大学理学部紀要 = Bulletin of the College of Science. Citation University of the Ryukyus(36): 105-115 Issue Date 1983-09 URL http://hdl.handle.net/20.500.12000/15327 Rights Bull, College of Science. Univ% of the Ryukyus, No. 36, 1983 105 Damselfishes of the Genus Amblyglyphidodon from Japan Tetsuo YOSHINO* , Chihiro TOMINAGA* and Kazuhiro OKAMOTO" Abstract The damselfish genus Amblyglyphidodon is represented in Japan by the follow ing four species: A. aureus (Cuvier), A. ternatensis (Bleeker), A.curacao (Bloch) and A. leucogaster (Bleeker). Among these, A. aureus and A. ternatensis have not been reported from Japanese waters. A key, brief descriptions and illustra tions are provided for these four species. Damselfishes of the genus Amblyglyphidodon are commonly found at coral reefs in the tropical Indo-West Pacific region and easily distinguished from other damselfishes in having an orbicular body. This genus is composed of only six species, of which four are distributed in the tropical western Pacific (Allen, 1975). In Japan, there have been known only two species, A. curacao and A. leucogaster, from the Ryukyu Islands (Aoyagi, 1941; Matsubara, 1955; Masuda et al, 1980). During the course of studies on damselfishes from the Ryukyu Islands, we have collected two other species, A. aureus and A. ternatensis. A careful examination of these four species has revealed that some key characters used by Allen (1975) to distinguish A. ternatensis from the other three species are not valid for our specimens. In this report we describe and illustrate these four species from the Ryukyu Islands with some discussions on the taxonomic characters. -
Pomacentridae): Structural and Expression Variation in Opsin Genes
Molecular Ecology (2017) 26, 1323–1342 doi: 10.1111/mec.13968 Why UV vision and red vision are important for damselfish (Pomacentridae): structural and expression variation in opsin genes SARA M. STIEB,*† FABIO CORTESI,*† LORENZ SUEESS,* KAREN L. CARLETON,‡ WALTER SALZBURGER† and N. J. MARSHALL* *Sensory Neurobiology Group, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia, †Zoological Institute, University of Basel, Basel 4051, Switzerland, ‡Department of Biology, The University of Maryland, College Park, MD 20742, USA Abstract Coral reefs belong to the most diverse ecosystems on our planet. The diversity in col- oration and lifestyles of coral reef fishes makes them a particularly promising system to study the role of visual communication and adaptation. Here, we investigated the evolution of visual pigment genes (opsins) in damselfish (Pomacentridae) and exam- ined whether structural and expression variation of opsins can be linked to ecology. Using DNA sequence data of a phylogenetically representative set of 31 damselfish species, we show that all but one visual opsin are evolving under positive selection. In addition, selection on opsin tuning sites, including cases of divergent, parallel, conver- gent and reversed evolution, has been strong throughout the radiation of damselfish, emphasizing the importance of visual tuning for this group. The highest functional variation in opsin protein sequences was observed in the short- followed by the long- wavelength end of the visual spectrum. Comparative gene expression analyses of a subset of the same species revealed that with SWS1, RH2B and RH2A always being expressed, damselfish use an overall short-wavelength shifted expression profile. Inter- estingly, not only did all species express SWS1 – a UV-sensitive opsin – and possess UV-transmitting lenses, most species also feature UV-reflective body parts. -
The Global Trade in Marine Ornamental Species
From Ocean to Aquarium The global trade in marine ornamental species Colette Wabnitz, Michelle Taylor, Edmund Green and Tries Razak From Ocean to Aquarium The global trade in marine ornamental species Colette Wabnitz, Michelle Taylor, Edmund Green and Tries Razak ACKNOWLEDGEMENTS UNEP World Conservation This report would not have been The authors would like to thank Helen Monitoring Centre possible without the participation of Corrigan for her help with the analyses 219 Huntingdon Road many colleagues from the Marine of CITES data, and Sarah Ferriss for Cambridge CB3 0DL, UK Aquarium Council, particularly assisting in assembling information Tel: +44 (0) 1223 277314 Aquilino A. Alvarez, Paul Holthus and and analysing Annex D and GMAD data Fax: +44 (0) 1223 277136 Peter Scott, and all trading companies on Hippocampus spp. We are grateful E-mail: [email protected] who made data available to us for to Neville Ash for reviewing and editing Website: www.unep-wcmc.org inclusion into GMAD. The kind earlier versions of the manuscript. Director: Mark Collins assistance of Akbar, John Brandt, Thanks also for additional John Caldwell, Lucy Conway, Emily comments to Katharina Fabricius, THE UNEP WORLD CONSERVATION Corcoran, Keith Davenport, John Daphné Fautin, Bert Hoeksema, Caroline MONITORING CENTRE is the biodiversity Dawes, MM Faugère et Gavand, Cédric Raymakers and Charles Veron; for assessment and policy implemen- Genevois, Thomas Jung, Peter Karn, providing reprints, to Alan Friedlander, tation arm of the United Nations Firoze Nathani, Manfred Menzel, Julie Hawkins, Sherry Larkin and Tom Environment Programme (UNEP), the Davide di Mohtarami, Edward Molou, Ogawa; and for providing the picture on world’s foremost intergovernmental environmental organization. -
Marine Livestock List
Hollybush Nurseries Ltd Warstone Road Shareshill Wolverhampton WV10 7LX Tel: 01922 418050 Fax: 01922 701028 Email: [email protected] Website: www.hollybush-garden.com Follow us on our Facebook Page: Hollybush Pets & Aquatics MARINE LIVESTOCK LIST: Species Scientific Name / Size Price DAMSELFISH Domino Damsel Dascyllus trimaculatus £7.99 each or 4 for £30.00 Dusky Damsel Stegastes adustus £7.99 each or 4 for £30.00 Yellowtail Damsel Chrysiptera parasema £9.99 each or 4 for £36.00 Regal Damsel Chrysiptera hemicyanea £9.99 each or 4 for £35.00 Royal Blue Damsel Chrysiptera springeri £11.99 each or 4 for £46.00 Blue-Green Chromis Chromis viridis £7.99 each or 4 for £30.00 Skunk Clownfish Amphiprion perideraion £74.00 for the pair Black & White Clownfish Amphiprion ocellaris £34.99 each or 2 for £60.00 Platinum Clownfish Amphiprion percula £69.99 or 2 for £120.00 Ocellaris Clownfish Amphiprion ocellaris £18.99 each or 2 for £30.00 GOBIES / BLENNIES / WRASSE Algae Blenny Salarias fasciatus £19.99 each Dot Dash Blenny Ecsenius lineatus £29.99 each Bicolour Blenny Ecsenius bicolor £19.99 each Molly Miller Blenny Scartella cristata £24.95 each Cleaner Wrasse Labroides dimidatus £19.99 each Glorious Wrasse Thalassoma quinquevittatum £75.99 each Sea Fighter Paracheilinus rubriventrallis £32.99 each Magnificent Firefish Nemateleotris magnifica £27.99 each or 2 for £40.00 Decorum Firefish Nemateleotris decora £39.99 each or 2 for £75.00 Engineer Goby Pholidichthys leucotaenia £12.99 each or 2 for £22.00 Sulphur Goby Cyptocentrus cinctus £39.99