Evaluation of In-Vitro Antioxidant Activity of Isolated Compounds of Lichen, Usnea Undulata E
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0L the Requirements for the Degree • U 33
A Monograph of Usnea from Sao Tome and Principe A thesis submitted to the faculty of % San Francisco State University MS In partial fulfillment of E><0L the requirements for the Degree • U 33 Master of Science In Biology: Ecology and Systematic Biology by Miko Rain Abraham Nadel San Francisco, California December 2015 Copyright by Miko Rain Abraham Nadel 2015 CERTIFICATION OF APPROVAL I certify that I have read Monograph of Usnea from Sao Tome and Principe by Miko Rain Abraham Nadel, and that in my opinion this work meets the criteria for approving a thesis submitted in partial fulfillment of the requirement for the degree Master of Science in Biology: Ecology and Systematic Biology at San Francisco State University. DennisE. DesL6rdin, Ph.D. Professor ofjsiology San Francisco State University Jose R. de la Torre, Ph.D. Associate Professor of Biology San Francisco State University Robert C. Drewes, Ph.D. Curator of Herpetology, Emeritus California Academy of Sciences A Monograph of Usnea from Sao Tome and Principe Miko Rain Abraham Nadel San Francisco, California 2015 A systematic monograph of the lichen genus Usnea from the remote, under-explored islands of Sao Tome and Principe (ST&P) in tropical West Africa is presented, treating 11 species representing 2 subgenera, Usnea and Eumitria. Ten of the 11 species are reported as new for ST&P, including U. firmula, U. baileyi, U. pectinata, U. aff. flammea, U. sanguinea, U. picta, U. krogiana and three undetermined, potentially new species, Usnea species A, B and C. Usnea articulata is confirmed for the main island of Sao Tome. -
Journal of Biogeography Supporting Information Community Change And
1 Journal of Biogeography 2 Supporting Information 3 Community change and species richness reductions in rapidly advancing treelines 4 Sarah Greenwood, Jan-Chang Chen, Chaur-Tzuhn Chen and Alistair S. Jump 5 Supporting Information 6 Appendix S1 7 Table S1: Explanation of treeline forms/structures used in the sampling design. 8 1 Treeline form Description Transects Sampling Mean locations transect along length (m) transects Abrupt advancing Treelines with an abrupt edge that 11 3: Interior 50 show evidence of advance. A dense forest, mid band of young trees is apparent at the forest, treeline edge of the forest and aerial photograph analysis shows advances of treeline in recent decades (Greenwood et al. 2014). Diffuse advancing Treelines that show evidence of 11 4: Interior 100 recent advance occurring in a diffuse forest, mid manner; regeneration has occurred forest, treeline, over a long distance at low density. tree limit Young trees can be seen scattered upslope at very low density beyond the treeline, forming the tree-limit at their upper limits. Aerial photographs provide evidence of recent advances of treeline (Greenwood et al. 2014) Static Treelines that show no evidence of 11 3: Interior 50 recent advance. Mature trees occur at forest, mid the edge of the forest and the treeline forest, treeline is abrupt in nature, no evidence of advance is apparent in aerial photographs (Greenwood et al. 2014). 9 10 2 11 Appendix S2 12 Literature and methods for lichen identification and accession numbers for GenBank 13 Literature used for species identification 14 Aproot, A., Lai, M-J. & Sparrius, L. -
Usnea Esperantiana (Parmeliaceae, Lichenized Ascomycota) New to Asia
Bull. Natl. Mus. Nat. Sci., Ser. B, 47(1), pp. 13–20, February 22, 2021 Usnea esperantiana (Parmeliaceae, lichenized Ascomycota) New to Asia Yoshihito Ohmura1, * and Philippe Clerc2 1 Department of Botany, National Museum of Nature and Science, 4–1–1 Amakubo, Tsukuba, Ibaraki, 305–0005, Japan 2 Conservatoire et Jardin botaniques de la Ville de Genève, Geneva, Switzerland *E-mail: [email protected] (Received 26 November 2020; accepted 23 December 2020) Abstract Usnea esperantiana is reported as new to Asia. It was collected from Taiwan where it grew on coniferous and broad-leaf trees at elevations between 1716 and 2580 m. The ITS rDNA sequences of Taiwanese and European materials of U. esperantiana form a monophyletic clade within the already reported clade consisting of U. cornuta and the related taxa. Although two dis- tinct clades were formed in the U. esperantiana clade, no morphological and chemical differences were found between them. All Taiwanese specimens contain usnic, salazinic and bourgeanic acids. The description is given based on the Taiwanese specimens. Keywords : chemistry, distribution, ITS rDNA, lichenized fungi, morphology, phylogeny, soralia, Taiwan, taxonomy. Introduction Materials and Methods The genus Usnea (Parmeliaceae, lichenized This study is based on the examinations of Ascomycota) in Taiwan was primarily revised by herbarium specimens housed in the herbarium of the first author and 41 accepted taxa were the National Museum of Nature and Science reported before the present study (Ohmura, 2001, (TNS), Tsukuba, Japan. 2012, 2014; Ohmura et al., 2010). Morphological observations for identification During the course of taxonomic study of the were made using a dissecting microscope and a genus Usnea in Taiwan, U. -
Herbalism, Phytochemistry and Ethnopharmacology Herbalism, Phytochemistry and Ethnopharmacology
Herbalism, Phytochemistry and Ethnopharmacology Herbalism, Phytochemistry and Ethnopharmacology AMRITPAL SINGH SAROYA Herbal Consultant Punjab India 6000 Broken Sound Parkway, NW CRC Press Suite 300, Boca Raton, FL 33487 Taylor & Francis Group 270 Madison Avenue Science Publishers an informa business New York, NY 10016 2 Park Square, Milton Park Enfield, New Hampshire www.crcpress.com Abingdon, Oxon OX 14 4RN, UK Published by Science Publishers, P.O. Box 699, Enfi eld, NH 03748, USA An imprint of Edenbridge Ltd., British Channel Islands E-mail: [email protected] Website: www.scipub.net Marketed and distributed by: 6000 Broken Sound Parkway, NW CRC Press Suite 300, Boca Raton, FL 33487 Taylor & Francis Group 270 Madison Avenue an informa business New York, NY 10016 2 Park Square, Milton Park www.crcpress.com Abingdon, Oxon OX 14 4RN, UK Copyright reserved © 2011 ISBN 978-1-57808-697-9 CIP data will be provided on request. The views expressed in this book are those of the author(s) and the publisher does not assume responsibility for the authenticity of the fi ndings/conclusions drawn by the author(s). Also no responsibility is assumed by the publishers for any damage to the property or persons as a result of operation or use of this publication and/or the information contained herein. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying or otherwise, without the prior permission of the publisher, in writing. The exception to this is when a reasonable part of the text is quoted for purpose of book review, abstracting etc. -
The 8Th IAL Symposium Lichens in Deep Time August 1–5, 2016 Helsinki, Finland IAL8 Abstracts
The 8th IAL Symposium Lichens in Deep Time August 1–5, 2016 Helsinki, Finland IAL8 Abstracts Welcome Messages, pages 3, 5 Opening Address, page 7 Abstracts of keynote lectures, pages 10–17 Abstracts of oral presentations, pages 21–82 Abstracts of poster presentations, pages 85–199 Welcome Message The President of the International Association of Lichenology Dear Fellow Lichenologist, It is a great pleasure for me to welcome you to IAL8 in Helsinki on behalf of the IAL Council and the Scientific Thorsten Lumbsch Committee of the symposium. IAL President Since the inaugural IAL meeting in Münster in March 1986, our society has had tremendously successful and enjoyable meetings. I still remember the first meeting when, for the first time, I met a number of prestigious colleagues and – as an The 8 undergraduate student – could interact with colleagues in a relaxed atmosphere. These meetings are especially vital for th students and early career scientists where they can interact – Lichens in Deep Time IAL Symposium with colleagues and build networks. Older scientists, like myself, can pass on essential guidance to younger scholars, while at the same time also learn from their new and bright ideas. We are confident that this 8th Symposium in Helsinki will be equally as memorable as the previous ones. Helsinki has a rich history and tradition in lichenological research and we are looking forward to this event, entitled ”Lichens in Deep Time”. Contributions to the symposium will reflect the latest trends in using genomic data to better understand the lichen symbiosis and the evolutionary history of its partners, have a strong part in ecological studies, address the threats imposed by rapid man-made changes occurring to the biosphere and an ever-growing interest in tropical lichens. -
Two Decades of DNA Barcoding in the Genus Usnea (Parmeliaceae): How Useful and Reliable Is the ITS?
Plant and Fungal Systematics 65(2): 303–357, 2020 ISSN 2544-7459 (print) DOI: https://doi.org/10.35535/pfsyst-2020-0025 ISSN 2657-5000 (online) Two decades of DNA barcoding in the genus Usnea (Parmeliaceae): how useful and reliable is the ITS? Robert Lücking1*, Miko Rain Abraham Nadel2, Elena Araujo3 & Alice Gerlach4 Abstract. We present an exhaustive analysis of the ITS barcoding marker in the genus Article info Usnea s.lat., separated into Dolichousnea, Eumitria, and Usnea including the subgenus Received: 7 Aug. 2020 Neuropogon, analyzing 1,751 accessions. We found only a few low-quality accessions, Revision received: 11 Nov. 2020 whereas information on voucher specimens and accuracy and precision of identifications Accepted: 11 Nov. 2020 was of subpar quality for many accessions. We provide an updated voucher table, align- Published: 29 Dec. 2020 ment and phylogenetic tree to facilitate DNA barcoding of Usnea, either locally or through Associate Editor curated databases such as UNITE. Taxonomic and geographic coverage was moderate: while María de los Angeles Herrera Dolichousnea and subgenus Neuropogon were well-represented among ITS data, sampling Campos for Eumitria and Usnea s.str. was sparse and biased towards certain lineages and geographic regions, such as Antarctica, Europe, and South America. North America, Africa, Asia and Oceania were undersampled. A peculiar situation arose with New Zealand, represented by a large amount of ITS accessions from across both major islands, but most of them left unidentified. The species pair Usnea antarctica vs. U. aurantiacoatra was the most sampled clade, including numerous ITS accessions from taxonomic and ecological studies. -
Exploring the Antibacterial, Antioxidant, and Anticancerproperties of Lichen Metabolites
Brigham Young University BYU ScholarsArchive Theses and Dissertations 2015-03-01 Exploring the Antibacterial, Antioxidant, and AnticancerProperties of Lichen Metabolites Gajendra Shrestha Brigham Young University - Provo Follow this and additional works at: https://scholarsarchive.byu.edu/etd Part of the Biology Commons BYU ScholarsArchive Citation Shrestha, Gajendra, "Exploring the Antibacterial, Antioxidant, and AnticancerProperties of Lichen Metabolites" (2015). Theses and Dissertations. 4393. https://scholarsarchive.byu.edu/etd/4393 This Dissertation is brought to you for free and open access by BYU ScholarsArchive. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of BYU ScholarsArchive. For more information, please contact [email protected], [email protected]. Exploring the Antibacterial, Antioxidant, and Anticancer Properties of Lichen Metabolites Gajendra Shrestha A dissertation submitted to the faculty of Brigham Young University in partial fulfillment of the requirements for the degree of Doctor of Philosophy Larry L. St. Clair, Chair Kim L. O’Neill Richard A. Robison Steven G. Wood Clinton J. Whipple Department of Biology Brigham Young University February 2015 Copyright © 2015 Gajendra Shrestha All Rights Reserved ABSTRACT Exploring the Antibacterial, Antioxidant, and Anticancer Properties of Lichen Metabolites Gajendra Shrestha Department of Biology, BYU Doctor of Philosophy Natural products have been a significant source of new drugs, especially in treating cancer, infectious diseases, hypertension, and neurological disorders. Although many natural metabolites have been screened and yielded pharmaceutically important drugs, many potential sources of natural product drug therapies still need to be investigated, including lichens. Lichens are symbiotic systems consisting of a filamentous fungus and a photosynthetic partner (an eukaryotic alga and/or cyanobacterium). -
A Synopsis of the Lichen Genus Usnea (Parmeliaceae, Ascomycota) in Taiwan
῏῍ΐῐῌ (48), pp. 91ῌ137, 2012 ῒ 3 ῎ 28 ῑ Mem. Natl. Mus. Nat. Sci., Tokyo, (48), pp. 91ῌ137, March28, 2012 A Synopsis of the Lichen Genus Usnea (Parmeliaceae, Ascomycota) in Taiwan Yoshihito Ohmura Department of Botany, National Museum of Nature and Science, 4ῌ1ῌ1 Amakubo, Tsukuba, Ibaraki 305ῌ0005, Japan E-mail: [email protected] Abstract. A key to the 40 taxa in the genus Usnea in Taiwan is presented. Usnea articulata is new to Taiwan. Usnea mutabilis is excluded from the lichen flora of Taiwan. Photographs of diagnostic features are also provided for the species that have not been adequately illustrated previously based on the Asian materials. Orthographical errors were corrected in U. shimadae and U. pseudogatae. Key words: flora, lichenized Ascomycota, morphology, secondary substances, taxonomy, TLC. accepted taxa (39 species and one variety) of Introduction the genus Usnea in Taiwan, along with the The genus Usnea (Parmeliaceae, Ascomy- diagnostic features with images which have not cota) consists of ca. 300 species, and is widely been adequately illustrated previously. distributed from polar zones to tropical area (Kirk et al., 2008). Diagnostic features of the Materials and Methods genus include a fruticose thallus with a cortex, medulla, and a cartilaginous central axis, and This study is primarily based on Ohmura the presence of usnic acid in the cortex. (2001) and Ohmura et al. (2010) and the Monophyly of the genus has been confirmed by herbarium specimens deposited in the National molecular phylogenetic methods using the Museum of Nature and Science, Tokyo (TNS) taxa having these synapomorphic features and the National Museum of Natural Science, (Ohmura, 2002; Ohmura & Kanda, 2004; Taichung (TNM), as well as specimens col- Articus, 2004; Wirtz et al., 2006), although lected mainly by the author between 2008 and Articus (2004) elevated several infrageneric 2010. -
Lichens Used in Traditional Medicine
Chapter 2 Lichens Used in Traditional Medicine Stuart D. Crawford Abstract Lichens are used in traditional medicines by cultures across the world, particularly in temperate and arctic regions. Knowledge of these medicinal uses is available to us because of the contributions of traditional knowledge holders in these cultures. The traditional medicinal uses of 52 lichen genera are summarized in this paper. Cultures in different regions of the world tend to emphasize different lichen genera in their traditional medicines, with Usnea being the most widely used genus. The folk taxonomy of lichens within a given culture is not synonymous with the scientific taxonomy and reflects the cultural value of those lichens and the tradi- tional method of their identification. Even within western science the identity and taxonomy of lichens have not remained constant throughout history. Lichens in traditional medicine are most commonly used for treating wounds, skin disorders, respiratory and digestive issues, and obstetric and gynecological concerns. They have been used for both their secondary metabolites and their storage carbohydrates. The European uses of lichens have been exported worldwide and sometimes influence the use of lichens by other cultures. These European uses started in the fifteenth and sixteenth centuries and arose from interpretations of Ancient Greek uses, as well as the application of the doctrine of signatures. 2.1 Introduction Lichens are important traditional medicines in many different cultures. This infor- mation has been made available to us from the contributions of hundreds of traditional knowledge holders in communities across the world. It is our responsi- bility to respect and value the knowledge that has been given to us. -
Ecological and Biological Studies of New Zealand Lichens in Genus Usnea
Lincoln University Digital Thesis Copyright Statement The digital copy of this thesis is protected by the Copyright Act 1994 (New Zealand). This thesis may be consulted by you, provided you comply with the provisions of the Act and the following conditions of use: you will use the copy only for the purposes of research or private study you will recognise the author's right to be identified as the author of the thesis and due acknowledgement will be made to the author where appropriate you will obtain the author's permission before publishing any material from the thesis. Ecological and Biological Studies of New Zealand Lichens in the Genus Usnea A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy at Lincoln University by Arash Rafat Lincoln University 2014 Abstract of a thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy Abstract Ecological and Biological Studies of New Zealand Lichens in the Genus Usnea by Arash Rafat Due to its complicated taxonomy, the ecology and evolution of the lichen genus Usnea has been understudied by lichenologists in New Zealand and around the world. To address this, almost 450 specimens of Usnea were collected in this study from 42 different sites around the North and South Islands of New Zealand. Molecular data (ITS rDNA) were generated for both the mycobiont and photobiont symbionts using specific algal and fungal primers. For the first time, the phylogenetic positions of the specimens within the genus Usnea in New Zealand and their associated photobionts were studied using Bayesian phylogenetic analysis of the molecular data. -
First Checklist of Lichens and Lichenicolous Fungi from Mauritius, with Phylogenetic Analyses and Descriptions of New Taxa
Plant and Fungal Systematics 65(1): 13–75, 2020 ISSN 2544-7459 (print) DOI: https://doi.org/10.35535/pfsyst-2020-0003 ISSN 2657-5000 (online) First checklist of lichens and lichenicolous fungi from Mauritius, with phylogenetic analyses and descriptions of new taxa Paul Diederich1* & Damien Ertz2,3 Abstract. A first checklist of the lichens and lichenicolous fungi from the Republic of Article info Mauritius is presented. It is based on older literature reports and on collections made by the Received: 29 Sept. 2019 authors, mainly in 2016, from the isles of Mauritius and Rodrigues. A total of 216 species Revision received: 11 Mar. 2020 are accepted, either as relevant specimens have recently been critically studied or revised Accepted: 16 Mar. 2020 by lichen taxonomists, or as we have collected and identified such material ourselves. Published: 2 Jun. 2020 A further 226 taxa have been reported from Mauritius but are not accepted here, either Associate Editor as no relevant herbarium material has recently been examined, or as previous records are Nicolas Magain dubious or erroneous; 111 taxa have been newly described from Mauritius in the past, plus 12 of which the Mauritian origin is dubious. Here we report 56 taxa as new for the island of Mauritius, and we describe two new genera (Baidera, Serusiauxia) and eight new species (Baidera mauritiana, Biatoropsis millanesiana, Chapsa alletii, Collemopsidium mauritiae, Nyungwea pyneei, Porina florensii, Pyrenula muriciliata, Serusiauxia inexpectata). Two new combinations are proposed: Loekoesia apostatica (≡ Lecanora apostatica) and Sticta flavireagens (≡ Stictina flavireagens). Phylogenetic analyses are presented for species of Arthoniales, Biatoropsis, Porinaceae, Pyrenulaceae and Teloschistales. -
GLALIA Revista Electrónica
Revista Electrónica del GLALIA Grupo LatinoAmericano de Liquenólogos Editor a cargo (2020-) .......................... Reinaldo Vargas Castillo Universidad Metropolitana de Ciencias de la Educación, Santiago, Chile <[email protected]> Editor a Cargo (2014-2019) ............................................................ Adriano A. Spielmann Universidade Federal de Mato Grosso do Sul, Campo grande, Brasil Editor a Cargo (2008-2014) .................................................................... Jesús Hernández Universidad Central de Venezuela, Caracas, Venezuela Editores asociados ............................................... Robert LÜCKING Botanical Garden and Botanical Museum, Berlin, Germany Bibiana MONCADA Universidad Distrital Francisco José de Caldas, Bogotá, Colombia Alejandra T. FAZIO Universidad de Buenos Aires, Buenos Aires, Argentina María de los ángeles Herrera-Campos Universidad Nacional Autónoma de México, México D.F. Jesús HERNÁNDEZ Universidad Central de Venezuela, Caracas, Venezuela Adriano A. Spielmann Universidade Federal de Mato Grosso do Sul, Campo grande, Brasil Cáratula: Falkland Island (Malvinas) (fotografía de D. Crabtree) Ilustración: Haematomma erythromma (fotografía de A. Fryday) Todos los derechos reservados, con excepción de la divulgación libre del trabajo completo en forma electrónica o impresa para fines académicos. 2019 Grupo Latinoamericano de Liquenólogos Publicado por: Departamento de Publicaciones de la Fundación Instituto Botánico de Venezuela (Depósito Legal: pp1200802DC2922) ISSN