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ORCHIDACEAE) BASED on MATK/YCF1 PLASTID DATA Lankesteriana International Journal on Orchidology, Vol
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica Whitten, W. Mark; Neubig, Kurt M.; Williams, N. H. GENERIC AND SUBTRIBAL RELATIONSHIPS IN NEOTROPICAL CYMBIDIEAE (ORCHIDACEAE) BASED ON MATK/YCF1 PLASTID DATA Lankesteriana International Journal on Orchidology, vol. 13, núm. 3, enero, 2013, pp. 375- 392 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44339826014 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 13(3): 375—392. 2014. I N V I T E D P A P E R* GENERIC AND SUBTRIBAL RELATIONSHIPS IN NEOTROPICAL CYMBIDIEAE (ORCHIDACEAE) BASED ON MATK/YCF1 PLASTID DATA W. MARK WHITTEN1,2, KURT M. NEUBIG1 & N. H. WILLIAMS1 1Florida Museum of Natural History, University of Florida Gainesville, FL 32611-7800 USA 2Corresponding author: [email protected] ABSTRACT. Relationships among all subtribes of Neotropical Cymbidieae (Orchidaceae) were estimated using combined matK/ycf1 plastid sequence data for 289 taxa. The matrix was analyzed using RAxML. Bootstrap (BS) analyses yield 100% BS support for all subtribes except Stanhopeinae (87%). Generic relationships within subtribes are highly resolved and are generally congruent with those presented in previous studies and as summarized in Genera Orchidacearum. Relationships among subtribes are largely unresolved. The Szlachetko generic classification of Maxillariinae is not supported. A new combination is made for Maxillaria cacaoensis J.T.Atwood in Camaridium. -
Generic and Subtribal Relationships in Neotropical Cymbidieae (Orchidaceae) Based on Matk/Ycf1 Plastid Data
LANKESTERIANA 13(3): 375—392. 2014. I N V I T E D P A P E R* GENERIC AND SUBTRIBAL RELATIONSHIPS IN NEOTROPICAL CYMBIDIEAE (ORCHIDACEAE) BASED ON MATK/YCF1 PLASTID DATA W. MARK WHITTEN1,2, KURT M. NEUBIG1 & N. H. WILLIAMS1 1Florida Museum of Natural History, University of Florida Gainesville, FL 32611-7800 USA 2Corresponding author: [email protected] ABSTRACT. Relationships among all subtribes of Neotropical Cymbidieae (Orchidaceae) were estimated using combined matK/ycf1 plastid sequence data for 289 taxa. The matrix was analyzed using RAxML. Bootstrap (BS) analyses yield 100% BS support for all subtribes except Stanhopeinae (87%). Generic relationships within subtribes are highly resolved and are generally congruent with those presented in previous studies and as summarized in Genera Orchidacearum. Relationships among subtribes are largely unresolved. The Szlachetko generic classification of Maxillariinae is not supported. A new combination is made for Maxillaria cacaoensis J.T.Atwood in Camaridium. KEY WORDS: Orchidaceae, Cymbidieae, Maxillariinae, matK, ycf1, phylogenetics, Camaridium, Maxillaria cacaoensis, Vargasiella Cymbidieae include many of the showiest align nrITS sequences across the entire tribe was Neotropical epiphytic orchids and an unparalleled unrealistic due to high levels of sequence divergence, diversity in floral rewards and pollination systems. and instead to concentrate our efforts on assembling Many researchers have posed questions such as a larger plastid data set based on two regions (matK “How many times and when has male euglossine and ycf1) that are among the most variable plastid bee pollination evolved?”(Ramírez et al. 2011), or exon regions and can be aligned with minimal “How many times have oil-reward flowers evolved?” ambiguity across broad taxonomic spans. -
Phylogenetic Relationships of Discyphus Scopulariae
Phytotaxa 173 (2): 127–139 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2014 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.173.2.3 Phylogenetic relationships of Discyphus scopulariae (Orchidaceae, Cranichideae) inferred from plastid and nuclear DNA sequences: evidence supporting recognition of a new subtribe, Discyphinae GERARDO A. SALAZAR1, CÁSSIO VAN DEN BERG2 & ALEX POPOVKIN3 1Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, Apartado Postal 70-367, 04510 México, Distrito Federal, México; E-mail: [email protected] 2Universidade Estadual de Feira de Santana, Departamento de Ciências Biológicas, Av. Transnordestina s.n., 44036-900, Feira de Santana, Bahia, Brazil 3Fazenda Rio do Negro, Entre Rios, Bahia, Brazil Abstract The monospecific genus Discyphus, previously considered a member of Spiranthinae (Orchidoideae: Cranichideae), displays both vegetative and floral morphological peculiarities that are out of place in that subtribe. These include a single, sessile, cordate leaf that clasps the base of the inflorescence and lies flat on the substrate, petals that are long-decurrent on the column, labellum margins free from sides of the column and a column provided with two separate, cup-shaped stigmatic areas. Because of its morphological uniqueness, the phylogenetic relationships of Discyphus have been considered obscure. In this study, we analyse nucleotide sequences of plastid and nuclear DNA under maximum parsimony -
New Taxa and New Combinations in Mesoamerican Spiranthinae (Orchidaceae, Spirantheae)
Ann. Bot. Fennici 41: 471–477 ISSN 0003-3847 Helsinki 21 December 2004 © Finnish Zoological and Botanical Publishing Board 2004 New taxa and new combinations in Mesoamerican Spiranthinae (Orchidaceae, Spirantheae) Piotr Rutkowski, Joanna Mytnik & Dariusz L. Szlachetko Department of Plant Taxonomy and Nature Conservation, Gdansk University, Al. Legionów 9, PL- 80-441 Gdansk, Poland (e-mails: [email protected], [email protected], [email protected]) Received 15 Dec. 2003, revised version received 10 Apr. 2004, accepted 15 June 2004 Rutkowski, P., Mytnik, J. & Szlachetko, D. L. 2004: New taxa and new combinations in Meso- american Spiranthinae (Orchidaceae, Spirantheae). — Ann. Bot. Fennici 41: 471–477. The following new species of the subtribe Spiranthinae (Orchidaceae, Spirantheae) are described and illustrated: Brachystele tamayoana Szlach., Rutk. & Mytnik and Kionophyton pollardiana Szlach., Rutk. & Mytnik. Keys for determination of the Mesoamerican species of Brachystele, Kionophyton and Galeottiella are provided. The following new combinations are proposed in Spiranthinae: Deiregyne Schltr. subgenus Aulosepalum (Garay) Szlach., Rutk. & Mytnik stat. & comb. nova, Microthelys hin- toniorum (Todzia) Szlach., Rutk. & Mytnik, comb. nova and Galeottiella orchioides (Lindl.) R.Gonzalez T. Key words: nomenclature, Orchidaceae, Spirantheae, Spiranthinae, taxonomy The large subtribe Spiranthinae (Orchidaceae, (1982), were published almost at the same time. Spirantheae) embraces about 30 genera (Szla- They presented fundamentally different taxo- chetko 1995a). This group can be distinguished nomic notions. In the 1990s the problem of by the viscidium, which is produced on the classification of Spiranthinae was taken up by adaxial layer of rostellum, and by the rostel- D. Szlachetko. After detailed studies by him lum remnant being deeply notched or fove- the undoubtedly heterogenous genus Spiranthes olate. -
Partial Endoreplication Stimulates Diversification in the Species-Richest Lineage Of
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.12.091074; this version posted May 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Partial endoreplication stimulates diversification in the species-richest lineage of 2 orchids 1,2,6 1,3,6 1,4,5,6 1,6 3 Zuzana Chumová , Eliška Záveská , Jan Ponert , Philipp-André Schmidt , Pavel *,1,6 4 Trávníček 5 6 1Czech Academy of Sciences, Institute of Botany, Zámek 1, Průhonice CZ-25243, Czech Republic 7 2Department of Botany, Faculty of Science, Charles University, Benátská 2, Prague CZ-12801, Czech Republic 8 3Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria 9 4Prague Botanical Garden, Trojská 800/196, Prague CZ-17100, Czech Republic 10 5Department of Experimental Plant Biology, Faculty of Science, Charles University, Viničná 5, Prague CZ- 11 12844, Czech Republic 12 13 6equal contributions 14 *corresponding author: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.05.12.091074; this version posted May 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 15 Abstract 16 Some of the most burning questions in biology in recent years concern differential 17 diversification along the tree of life and its causes. -
The Orchid Flora of the Colombian Department of Valle Del Cauca
Revista Mexicana de Biodiversidad 85: 445-462, 2014 Revista Mexicana de Biodiversidad 85: 445-462, 2014 DOI: 10.7550/rmb.32511 DOI: 10.7550/rmb.32511445 The orchid flora of the Colombian Department of Valle del Cauca La orquideoflora del departamento colombiano de Valle del Cauca Marta Kolanowska Department of Plant Taxonomy and Nature Conservation, University of Gdańsk. Wita Stwosza 59, 80-308 Gdańsk, Poland. [email protected] Abstract. The floristic, geographical and ecological analysis of the orchid flora of the department of Valle del Cauca are presented. The study area is located in the southwestern Colombia and it covers about 22 140 km2 of land across 4 physiographic units. All analysis are based on the fieldwork and on the revision of the herbarium material. A list of 572 orchid species occurring in the department of Valle del Cauca is presented. Two species, Arundina graminifolia and Vanilla planifolia, are non-native elements of the studied orchid flora. The greatest species diversity is observed in the montane regions of the study area, especially in wet montane forest. The department of Valle del Cauca is characterized by the high level of endemism and domination of the transitional elements within the studied flora. The main problems encountered during the research are discussed in the context of tropical floristic studies. Key words: biodiversity, ecology, distribution, Orchidaceae. Resumen. Se presentan los resultados de los estudios geográfico, ecológico y florístico de la orquideoflora del departamento colombiano del Valle del Cauca. El área de estudio está ubicada al suroccidente de Colombia y cubre aproximadamente 22 140 km2 de tierra a través de 4 unidades fisiográficas. -
Orchid Historical Biogeography, Diversification, Antarctica and The
Journal of Biogeography (J. Biogeogr.) (2016) ORIGINAL Orchid historical biogeography, ARTICLE diversification, Antarctica and the paradox of orchid dispersal Thomas J. Givnish1*, Daniel Spalink1, Mercedes Ames1, Stephanie P. Lyon1, Steven J. Hunter1, Alejandro Zuluaga1,2, Alfonso Doucette1, Giovanny Giraldo Caro1, James McDaniel1, Mark A. Clements3, Mary T. K. Arroyo4, Lorena Endara5, Ricardo Kriebel1, Norris H. Williams5 and Kenneth M. Cameron1 1Department of Botany, University of ABSTRACT Wisconsin-Madison, Madison, WI 53706, Aim Orchidaceae is the most species-rich angiosperm family and has one of USA, 2Departamento de Biologıa, the broadest distributions. Until now, the lack of a well-resolved phylogeny has Universidad del Valle, Cali, Colombia, 3Centre for Australian National Biodiversity prevented analyses of orchid historical biogeography. In this study, we use such Research, Canberra, ACT 2601, Australia, a phylogeny to estimate the geographical spread of orchids, evaluate the impor- 4Institute of Ecology and Biodiversity, tance of different regions in their diversification and assess the role of long-dis- Facultad de Ciencias, Universidad de Chile, tance dispersal (LDD) in generating orchid diversity. 5 Santiago, Chile, Department of Biology, Location Global. University of Florida, Gainesville, FL 32611, USA Methods Analyses use a phylogeny including species representing all five orchid subfamilies and almost all tribes and subtribes, calibrated against 17 angiosperm fossils. We estimated historical biogeography and assessed the -
The Orchid Flora of the Colombian Department of Valle Del Cauca Revista Mexicana De Biodiversidad, Vol
Revista Mexicana de Biodiversidad ISSN: 1870-3453 [email protected] Universidad Nacional Autónoma de México México Kolanowska, Marta The orchid flora of the Colombian Department of Valle del Cauca Revista Mexicana de Biodiversidad, vol. 85, núm. 2, 2014, pp. 445-462 Universidad Nacional Autónoma de México Distrito Federal, México Available in: http://www.redalyc.org/articulo.oa?id=42531364003 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Revista Mexicana de Biodiversidad 85: 445-462, 2014 Revista Mexicana de Biodiversidad 85: 445-462, 2014 DOI: 10.7550/rmb.32511 DOI: 10.7550/rmb.32511445 The orchid flora of the Colombian Department of Valle del Cauca La orquideoflora del departamento colombiano de Valle del Cauca Marta Kolanowska Department of Plant Taxonomy and Nature Conservation, University of Gdańsk. Wita Stwosza 59, 80-308 Gdańsk, Poland. [email protected] Abstract. The floristic, geographical and ecological analysis of the orchid flora of the department of Valle del Cauca are presented. The study area is located in the southwestern Colombia and it covers about 22 140 km2 of land across 4 physiographic units. All analysis are based on the fieldwork and on the revision of the herbarium material. A list of 572 orchid species occurring in the department of Valle del Cauca is presented. Two species, Arundina graminifolia and Vanilla planifolia, are non-native elements of the studied orchid flora. The greatest species diversity is observed in the montane regions of the study area, especially in wet montane forest. -
Epilist 1.0: a Global Checklist of Vascular Epiphytes
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2021 EpiList 1.0: a global checklist of vascular epiphytes Zotz, Gerhard ; Weigelt, Patrick ; Kessler, Michael ; Kreft, Holger ; Taylor, Amanda Abstract: Epiphytes make up roughly 10% of all vascular plant species globally and play important functional roles, especially in tropical forests. However, to date, there is no comprehensive list of vas- cular epiphyte species. Here, we present EpiList 1.0, the first global list of vascular epiphytes based on standardized definitions and taxonomy. We include obligate epiphytes, facultative epiphytes, and hemiepiphytes, as the latter share the vulnerable epiphytic stage as juveniles. Based on 978 references, the checklist includes >31,000 species of 79 plant families. Species names were standardized against World Flora Online for seed plants and against the World Ferns database for lycophytes and ferns. In cases of species missing from these databases, we used other databases (mostly World Checklist of Selected Plant Families). For all species, author names and IDs for World Flora Online entries are provided to facilitate the alignment with other plant databases, and to avoid ambiguities. EpiList 1.0 will be a rich source for synthetic studies in ecology, biogeography, and evolutionary biology as it offers, for the first time, a species‐level overview over all currently known vascular epiphytes. At the same time, the list represents work in progress: species descriptions of epiphytic taxa are ongoing and published life form information in floristic inventories and trait and distribution databases is often incomplete and sometimes evenwrong. -
E29695d2fc942b3642b5dc68ca
ISSN 1409-3871 VOL. 9, No. 1—2 AUGUST 2009 Orchids and orchidology in Central America: 500 years of history CARLOS OSSENBACH INTERNATIONAL JOURNAL ON ORCHIDOLOGY LANKESTERIANA INTERNATIONAL JOURNAL ON ORCHIDOLOGY Copyright © 2009 Lankester Botanical Garden, University of Costa Rica Effective publication date: August 30, 2009 Layout: Jardín Botánico Lankester. Cover: Chichiltic tepetlauxochitl (Laelia speciosa), from Francisco Hernández, Rerum Medicarum Novae Hispaniae Thesaurus, Rome, Jacobus Mascardus, 1628. Printer: Litografía Ediciones Sanabria S.A. Printed copies: 500 Printed in Costa Rica / Impreso en Costa Rica R Lankesteriana / International Journal on Orchidology No. 1 (2001)-- . -- San José, Costa Rica: Editorial Universidad de Costa Rica, 2001-- v. ISSN-1409-3871 1. Botánica - Publicaciones periódicas, 2. Publicaciones periódicas costarricenses LANKESTERIANA i TABLE OF CONTENTS Introduction 1 Geographical and historical scope of this study 1 Political history of Central America 3 Central America: biodiversity and phytogeography 7 Orchids in the prehispanic period 10 The area of influence of the Chibcha culture 10 The northern region of Central America before the Spanish conquest 11 Orchids in the cultures of Mayas and Aztecs 15 The history of Vanilla 16 From the Codex Badianus to Carl von Linné 26 The Codex Badianus 26 The expedition of Francisco Hernández to New Spain (1570-1577) 26 A new dark age 28 The “English American” — the journey through Mexico and Central America of Thomas Gage (1625-1637) 31 The renaissance of science -
Explosive Local Radiation of the Genus Teagueia (Orchidaceae) in the Upper Pastaza Watershed of Ecuador
Volume 7(1) Explosive Local Radiation of the Genus Teagueia (Orchidaceae) in the Upper Pastaza Watershed of Ecuador. Radiacion Explosivo del Genero Teagueia (Orchidaceae) en la Cuenca Alta del Rio Pastaza, Ecuador. Lou Jost Baños, Tungurahua, Ecuador, Email: [email protected] December 2004 Download at: http://www.lyonia.org/downloadPDF.php?pdfID=2.323.1 Lou Jost 42 Explosive Local Radiation of the Genus Teagueia (Orchidaceae) in the Upper Pastaza Watershed of Ecuador. Abstract In the year 2000 the genus Teagueia Luer (Orchidaceae, subtribe Pleurothallidinae) contained only six species, all epiphytic. Recently we have discovered 26 unusual new terrestrial species of Teagueia on four neighboring mountains in the Upper Pastaza Watershed. All 26 species share distinctive floral and vegetative characters not found in the six previously described members of Teagueia, suggesting that all 26 evolved locally from a recent common ancestor. Each of the Teagueia Mountains hosts 7-15 sympatric species of new Teagueia, suggesting that the speciation events, which produced this radiation, may have occurred in sympatric populations. There is little overlap in the Teagueia species hosted by the mountains, though they are separated by only 10-18 km. This is difficult to explain in light of the high dispersal ability of most orchids. Surprisingly, the species appear not to be habitat specialists. In forest above 3100 m, population densities of these new Teagueia are higher than those of any other genera of terrestrial flowering plants. In the paramos of these mountains they are the most common orchids; they reach higher elevations (3650m) than any other pleurothallid orchid except Draconanthes aberrans. -
Orchidaceae, Spiranthinae) and a New Genus from the Espinhaço Range, Southeastern Brazil Authors: Gerardo A
Polyphyly of Mesadenus (Orchidaceae, Spiranthinae) and a New Genus from the Espinhaço Range, Southeastern Brazil Authors: Gerardo A. Salazar, João A. N. Batista, Thiago E. C. Meneguzzo, Lidia I. Cabrera, Coyolxauhqui Figueroa, et. al. Source: Systematic Botany, 44(2) : 282-296 Published By: The American Society of Plant Taxonomists URL: https://doi.org/10.1600/036364419X15562054132974 BioOne Complete (complete.BioOne.org) is a full-text database of 200 subscribed and open-access titles in the biological, ecological, and environmental sciences published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Complete website, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/terms-of-use. Usage of BioOne Complete content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Downloaded From: https://bioone.org/journals/Systematic-Botany on 29 Jul 2019 Terms of Use: https://bioone.org/terms-of-use Access provided by Universidad Autonoma de Ciudad Juarez Systematic Botany (2019), 44(2): pp. 282–296 © Copyright 2019 by the American Society of Plant Taxonomists DOI 10.1600/036364419X15562054132974 Date of publication May 30, 2019 Polyphyly of Mesadenus (Orchidaceae, Spiranthinae) and a New Genus from the Espinhaço Range, Southeastern Brazil Gerardo A. Salazar,1,6 Jo~ao A.