Regulation of Physical Microglia–Neuron Interactions by Fractalkine Signaling After Status Epilepticus
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A Guide to Glutamate Receptors
A guide to glutamate receptors 1 Contents Glutamate receptors . 4 Ionotropic glutamate receptors . 4 - Structure ........................................................................................................... 4 - Function ............................................................................................................ 5 - AMPA receptors ................................................................................................. 6 - NMDA receptors ................................................................................................. 6 - Kainate receptors ............................................................................................... 6 Metabotropic glutamate receptors . 8 - Structure ........................................................................................................... 8 - Function ............................................................................................................ 9 - Group I: mGlu1 and mGlu5. .9 - Group II: mGlu2 and mGlu3 ................................................................................. 10 - Group III: mGlu4, mGlu6, mGlu7 and mGlu8 ............................................................ 10 Protocols and webinars . 11 - Protocols ......................................................................................................... 11 - Webinars ......................................................................................................... 12 References and further reading . 13 Excitatory synapse pathway -
Lysophosphatidic Acid Signaling in the Nervous System
Neuron Review Lysophosphatidic Acid Signaling in the Nervous System Yun C. Yung,1,3 Nicole C. Stoddard,1,2,3 Hope Mirendil,1 and Jerold Chun1,* 1Molecular and Cellular Neuroscience Department, Dorris Neuroscience Center, The Scripps Research Institute, La Jolla, CA 92037, USA 2Biomedical Sciences Graduate Program, University of California, San Diego School of Medicine, La Jolla, CA 92037, USA 3Co-first author *Correspondence: [email protected] http://dx.doi.org/10.1016/j.neuron.2015.01.009 The brain is composed of many lipids with varied forms that serve not only as structural components but also as essential signaling molecules. Lysophosphatidic acid (LPA) is an important bioactive lipid species that is part of the lysophospholipid (LP) family. LPA is primarily derived from membrane phospholipids and signals through six cognate G protein-coupled receptors (GPCRs), LPA1-6. These receptors are expressed on most cell types within central and peripheral nervous tissues and have been functionally linked to many neural pro- cesses and pathways. This Review covers a current understanding of LPA signaling in the nervous system, with particular focus on the relevance of LPA to both physiological and diseased states. Introduction LPA synthesis/degradative enzymes (reviewed in Sigal et al., The human brain is composed of approximately 60%–70% lipids 2005; Brindley and Pilquil, 2009; Perrakis and Moolenaar, by dry weight (Svennerholm et al., 1994). These lipids can be 2014). In view of the broad neurobiological influences of LPA divided into two major pools, structural and signaling, which signaling, its dysregulation may lead to diverse neuropathologies include well-known families such as cholesterol, fatty acids, ei- (Bandoh et al., 2000; Houben and Moolenaar, 2011; Yung et al., cosanoids, endocannabinoids, and prostaglandins (Figure 1). -
Interplay Between Gating and Block of Ligand-Gated Ion Channels
brain sciences Review Interplay between Gating and Block of Ligand-Gated Ion Channels Matthew B. Phillips 1,2, Aparna Nigam 1 and Jon W. Johnson 1,2,* 1 Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260, USA; [email protected] (M.B.P.); [email protected] (A.N.) 2 Center for Neuroscience, University of Pittsburgh, Pittsburgh, PA 15260, USA * Correspondence: [email protected]; Tel.: +1-(412)-624-4295 Received: 27 October 2020; Accepted: 26 November 2020; Published: 1 December 2020 Abstract: Drugs that inhibit ion channel function by binding in the channel and preventing current flow, known as channel blockers, can be used as powerful tools for analysis of channel properties. Channel blockers are used to probe both the sophisticated structure and basic biophysical properties of ion channels. Gating, the mechanism that controls the opening and closing of ion channels, can be profoundly influenced by channel blocking drugs. Channel block and gating are reciprocally connected; gating controls access of channel blockers to their binding sites, and channel-blocking drugs can have profound and diverse effects on the rates of gating transitions and on the stability of channel open and closed states. This review synthesizes knowledge of the inherent intertwining of block and gating of excitatory ligand-gated ion channels, with a focus on the utility of channel blockers as analytic probes of ionotropic glutamate receptor channel function. Keywords: ligand-gated ion channel; channel block; channel gating; nicotinic acetylcholine receptor; ionotropic glutamate receptor; AMPA receptor; kainate receptor; NMDA receptor 1. Introduction Neuronal information processing depends on the distribution and properties of the ion channels found in neuronal membranes. -
Chemical Labelling for Visualizing Native AMPA Receptors in Live Neurons
ARTICLE Received 1 Aug 2016 | Accepted 8 Feb 2017 | Published 7 Apr 2017 DOI: 10.1038/ncomms14850 OPEN Chemical labelling for visualizing native AMPA receptors in live neurons Sho Wakayama1,*, Shigeki Kiyonaka1,*, Itaru Arai2, Wataru Kakegawa2, Shinji Matsuda2,3,4, Keiji Ibata2, Yuri L. Nemoto5, Akihiro Kusumi5,6, Michisuke Yuzaki2,7 & Itaru Hamachi1,7 The location and number of neurotransmitter receptors are dynamically regulated at postsynaptic sites. However, currently available methods for visualizing receptor trafficking require the introduction of genetically engineered receptors into neurons, which can disrupt the normal functioning and processing of the original receptor. Here we report a powerful method for visualizing native a-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA)-type glutamate receptors (AMPARs) which are essential for cognitive functions without any genetic manipulation. This is based on a covalent chemical labelling strategy driven by selective ligand-protein recognition to tether small fluorophores to AMPARs using chemical AMPAR modification (CAM) reagents. The high penetrability of CAM reagents enables visualization of native AMPARs deep in brain tissues without affecting receptor function. Moreover, CAM reagents are used to characterize the diffusion dynamics of endogenous AMPARs in both cultured neurons and hippocampal slices. This method will help clarify the involvement of AMPAR trafficking in various neuropsychiatric and neurodevelopmental disorders. 1 Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Nishikyo-ku 615-8510, Japan. 2 Department of Physiology, School of Medicine, Keio University, Tokyo 160-8582, Japan. 3 Department of Engineering Science, Graduate School of Informatics and Engineering, University of Electro-Communication, Tokyo 182-8585, Japan. -
Exploring the Heteromeric Interface of the 5-HT2A-Mglu2 Receptor Complex
Virginia Commonwealth University VCU Scholars Compass Theses and Dissertations Graduate School 2020 Exploring the Heteromeric Interface of the 5-HT2A-mGlu2 Receptor Complex Mohamed Aarif Abdul Kareem Virginia Commonwealth University Follow this and additional works at: https://scholarscompass.vcu.edu/etd Part of the Nervous System Diseases Commons, Other Psychiatry and Psychology Commons, Physiological Processes Commons, and the Translational Medical Research Commons © The Author Downloaded from https://scholarscompass.vcu.edu/etd/6235 This Thesis is brought to you for free and open access by the Graduate School at VCU Scholars Compass. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of VCU Scholars Compass. For more information, please contact [email protected]. Exploring the Heteromeric Interface of the 5-HT2A-mGlu2 Receptor Complex A Thesis submitted in partial fulfillment of the requirements for the degree of Master of Science in Physiology and Biophysics at Virginia Commonwealth University By: Mohamed Aarif Abdul Kareem B.A. Neurobiology, Boston University, 2018 Mentor: Javier González-Maeso Associate Professor Department of Physiology and Biophysics Virginia Commonwealth University Richmond, Virginia April 30, 2020 Acknowledgments: Thank you to my peers for their continued support of my dreams and aspirations. Thank you to my mentors for pushing and supporting me every step of the way. Thank you to Virginia Commonwealth University for providing opportunities which foster my passion for science and allow it to continue to flourish. Indeed, I owe much gratitude to my parents, Abdul & Jasmine Kareem, who have guided me in becoming a strong, independent student, and encourage me to take calculated risks and face challenges head on. -
Multi-Functionality of Proteins Involved in GPCR and G Protein Signaling: Making Sense of Structure–Function Continuum with In
Cellular and Molecular Life Sciences (2019) 76:4461–4492 https://doi.org/10.1007/s00018-019-03276-1 Cellular andMolecular Life Sciences REVIEW Multi‑functionality of proteins involved in GPCR and G protein signaling: making sense of structure–function continuum with intrinsic disorder‑based proteoforms Alexander V. Fonin1 · April L. Darling2 · Irina M. Kuznetsova1 · Konstantin K. Turoverov1,3 · Vladimir N. Uversky2,4 Received: 5 August 2019 / Revised: 5 August 2019 / Accepted: 12 August 2019 / Published online: 19 August 2019 © Springer Nature Switzerland AG 2019 Abstract GPCR–G protein signaling system recognizes a multitude of extracellular ligands and triggers a variety of intracellular signal- ing cascades in response. In humans, this system includes more than 800 various GPCRs and a large set of heterotrimeric G proteins. Complexity of this system goes far beyond a multitude of pair-wise ligand–GPCR and GPCR–G protein interactions. In fact, one GPCR can recognize more than one extracellular signal and interact with more than one G protein. Furthermore, one ligand can activate more than one GPCR, and multiple GPCRs can couple to the same G protein. This defnes an intricate multifunctionality of this important signaling system. Here, we show that the multifunctionality of GPCR–G protein system represents an illustrative example of the protein structure–function continuum, where structures of the involved proteins represent a complex mosaic of diferently folded regions (foldons, non-foldons, unfoldons, semi-foldons, and inducible foldons). The functionality of resulting highly dynamic conformational ensembles is fne-tuned by various post-translational modifcations and alternative splicing, and such ensembles can undergo dramatic changes at interaction with their specifc partners. -
G-Protein-Coupled Receptors in CNS: a Potential Therapeutic Target for Intervention in Neurodegenerative Disorders and Associated Cognitive Deficits
cells Review G-Protein-Coupled Receptors in CNS: A Potential Therapeutic Target for Intervention in Neurodegenerative Disorders and Associated Cognitive Deficits Shofiul Azam 1 , Md. Ezazul Haque 1, Md. Jakaria 1,2 , Song-Hee Jo 1, In-Su Kim 3,* and Dong-Kug Choi 1,3,* 1 Department of Applied Life Science & Integrated Bioscience, Graduate School, Konkuk University, Chungju 27478, Korea; shofi[email protected] (S.A.); [email protected] (M.E.H.); md.jakaria@florey.edu.au (M.J.); [email protected] (S.-H.J.) 2 The Florey Institute of Neuroscience and Mental Health, The University of Melbourne, Parkville, VIC 3010, Australia 3 Department of Integrated Bioscience & Biotechnology, College of Biomedical and Health Science, and Research Institute of Inflammatory Disease (RID), Konkuk University, Chungju 27478, Korea * Correspondence: [email protected] (I.-S.K.); [email protected] (D.-K.C.); Tel.: +82-010-3876-4773 (I.-S.K.); +82-43-840-3610 (D.-K.C.); Fax: +82-43-840-3872 (D.-K.C.) Received: 16 January 2020; Accepted: 18 February 2020; Published: 23 February 2020 Abstract: Neurodegenerative diseases are a large group of neurological disorders with diverse etiological and pathological phenomena. However, current therapeutics rely mostly on symptomatic relief while failing to target the underlying disease pathobiology. G-protein-coupled receptors (GPCRs) are one of the most frequently targeted receptors for developing novel therapeutics for central nervous system (CNS) disorders. Many currently available antipsychotic therapeutics also act as either antagonists or agonists of different GPCRs. Therefore, GPCR-based drug development is spreading widely to regulate neurodegeneration and associated cognitive deficits through the modulation of canonical and noncanonical signals. -
Mechanism for Neurotransmitter-Receptor Matching
Mechanism for neurotransmitter-receptor matching Dena R. Hammond-Weinbergera,1,2, Yunxin Wanga, Alex Glavis-Blooma, and Nicholas C. Spitzera,b,1 aNeurobiology Section, Division of Biological Sciences, University of California San Diego, La Jolla, CA 92093-0357; and bCenter for Neural Circuits and Behavior, Kavli Institute for Brain and Mind, University of California San Diego, La Jolla, CA 92161 Contributed by Nicholas C. Spitzer, January 6, 2020 (sent for review September 25, 2019; reviewed by Laura N. Borodinsky and Joshua R. Sanes) Synaptic communication requires the expression of functional neurons lead to the appearance of functional neuromuscular postsynaptic receptors that match the presynaptically released junctions expressing GluR1 and GluR2 (alias GluA1 and GluA2) neurotransmitter. The ability of neurons to switch the transmitter subunits, which are blocked by the AMPA receptor antagonist they release is increasingly well documented, and these switches GYKI 52466 (16, 17). In the central nervous system, the natural require changes in the postsynaptic receptor population. Al- developmental transmitter switch from GABA to glycine in the though the activity-dependent molecular mechanism of neuro- auditory nervous system is accompanied by alterations in the transmitter switching is increasingly well understood, the basis properties of postsynaptic receptors (18, 19). Changes in illumi- of specification of postsynaptic neurotransmitter receptors match- nation during development or in photoperiod in the adult lead to ing the newly expressed transmitter is unknown. Using a func- changes in the numbers of neurons expressing dopamine in the tional assay, we show that sustained application of glutamate to embryonic vertebrate skeletal muscle cells cultured before hypothalamus that are accompanied by corresponding up- or innervation is necessary and sufficient to up-regulate ionotropic down-regulation of dopamine receptor expression in postsynaptic glutamate receptors from a pool of different receptors expressed neurons (5, 7). -
Supplementary Table 1
Supplementary Table 1. 492 genes are unique to 0 h post-heat timepoint. The name, p-value, fold change, location and family of each gene are indicated. Genes were filtered for an absolute value log2 ration 1.5 and a significance value of p ≤ 0.05. Symbol p-value Log Gene Name Location Family Ratio ABCA13 1.87E-02 3.292 ATP-binding cassette, sub-family unknown transporter A (ABC1), member 13 ABCB1 1.93E-02 −1.819 ATP-binding cassette, sub-family Plasma transporter B (MDR/TAP), member 1 Membrane ABCC3 2.83E-02 2.016 ATP-binding cassette, sub-family Plasma transporter C (CFTR/MRP), member 3 Membrane ABHD6 7.79E-03 −2.717 abhydrolase domain containing 6 Cytoplasm enzyme ACAT1 4.10E-02 3.009 acetyl-CoA acetyltransferase 1 Cytoplasm enzyme ACBD4 2.66E-03 1.722 acyl-CoA binding domain unknown other containing 4 ACSL5 1.86E-02 −2.876 acyl-CoA synthetase long-chain Cytoplasm enzyme family member 5 ADAM23 3.33E-02 −3.008 ADAM metallopeptidase domain Plasma peptidase 23 Membrane ADAM29 5.58E-03 3.463 ADAM metallopeptidase domain Plasma peptidase 29 Membrane ADAMTS17 2.67E-04 3.051 ADAM metallopeptidase with Extracellular other thrombospondin type 1 motif, 17 Space ADCYAP1R1 1.20E-02 1.848 adenylate cyclase activating Plasma G-protein polypeptide 1 (pituitary) receptor Membrane coupled type I receptor ADH6 (includes 4.02E-02 −1.845 alcohol dehydrogenase 6 (class Cytoplasm enzyme EG:130) V) AHSA2 1.54E-04 −1.6 AHA1, activator of heat shock unknown other 90kDa protein ATPase homolog 2 (yeast) AK5 3.32E-02 1.658 adenylate kinase 5 Cytoplasm kinase AK7 -
Microglia Activation Triggers Astrocyte-Mediated Modulation of Excitatory Neurotransmission
Microglia activation triggers astrocyte-mediated PNAS PLUS modulation of excitatory neurotransmission Olivier Pascuala,b,c,1,2, Sarrah Ben Achoura,b,c,2, Philippe Rostainga,b,c, Antoine Trillera,b,c, and Alain Bessisa,b,c aInstitut de Biologie de l’Ecole Normale Supérieure, F-75005 Paris, France; bInstitut National de la Santé et de la Recherche Médicale U1024, F-75005 Paris, France; and cCentre National de la Recherche Scientifique, Unité Mixte de Recherche 8197, F-75005 Paris, France Edited* by Tullio Pozzan, University of Padova, Padua, Italy, and approved November 21, 2011 (received for review July 18, 2011) Fine control of neuronal activity is crucial to rapidly adjust to subtle tatively able to sense neuronal activity and/or communicate with changes of the environment. This fine tuning was thought to be astrocytes. In response to stimuli, microglia are activated, and they purely neuronal until the discovery that astrocytes are active players release neurotransmitters (19), which are small molecules such as of synaptic transmission. In the adult hippocampus, microglia are nitric oxide, trophic factors, or cytokines, all known to control the other major glial cell type. Microglia are highly dynamic and neuronal function and synaptic transmission (20, 21). In addition, closely associated with neurons and astrocytes. They react rapidly to changes in plasticity and neuronal activity have been shown to modifications of their environment and are able to release mole- modify the resident time of microglia processes at synapses (22). cules known to control neuronal function and synaptic transmission. Although long-term effects of microglial activation and in- Therefore, microglia display functional features of synaptic part- flammation have been studied (14, 23, 24), early consequences of ners, but their involvement in the regulation of synaptic trans- such activation are still unknown, especially the cell type involved mission has not yet been addressed. -
Kenneth Martin Rosenberg Email: [email protected], [email protected] 660 West Redwood Street, Howard Hall Room 332D, Baltimore, MD, 21201
The impact of the non-immune chemiome on T cell activation Item Type dissertation Authors Rosenberg, Kenneth Publication Date 2020 Abstract T cells are critical organizers of the immune response and rigid control over their activation is necessary for balancing host defense and immunopathology. It takes 3 signals provided by dendritic cells (DC) to fully activate a T cell response – T ce... Keywords signaling; T cell; T-Lymphocytes--immunology Download date 02/10/2021 13:41:58 Link to Item http://hdl.handle.net/10713/14477 Kenneth Martin Rosenberg Email: [email protected], [email protected] 660 West Redwood Street, Howard Hall Room 332D, Baltimore, MD, 21201 EDUCATION MD, University of Maryland, Baltimore, MD Expected May 2022 PhD, University of Maryland, Baltimore, MD December 2020 Graduate Program: Molecular Microbiology and Immunology (MMI) BS, University of Maryland, College Park, MD May 2013 Major: Bioengineering, cum laude University Honors Citation, Gemstone Citation RESEARCH EXPERIENCE UMSOM Microbiology and Immunology Baltimore, MD July 2016-present PhD Candidate Principal Investigator: Dr. Nevil Singh Thesis: The impact of the non-immune chemiome on T cell activation Examined environmental stimuli from classically “non-immune” sources – growth factors, hormones, neurotransmitters, etc. – act to modulate T cell signaling pathways and the functional effects of activating encounters with dendritic cells. UMSOM Anatomy and Neurobiology Baltimore, MD May-August 2015 Rotating student Principal Investigator: Dr. Asaf Keller Studied the role of descending modulation pathways on affective pain transmission. Performed tract- tracing experiments using targeted injection of Cholera toxin subunit B into the lateral parabrachial nucleus and ventrolateral periaqueductal gray of anesthetized transgenic mice. -
The G Protein-Coupled Receptor Heterodimer Network (GPCR-Hetnet) and Its Hub Components
Int. J. Mol. Sci. 2014, 15, 8570-8590; doi:10.3390/ijms15058570 OPEN ACCESS International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.com/journal/ijms Article The G Protein-Coupled Receptor Heterodimer Network (GPCR-HetNet) and Its Hub Components Dasiel O. Borroto-Escuela 1,†,*, Ismel Brito 1,2,†, Wilber Romero-Fernandez 1, Michael Di Palma 1,3, Julia Oflijan 4, Kamila Skieterska 5, Jolien Duchou 5, Kathleen Van Craenenbroeck 5, Diana Suárez-Boomgaard 6, Alicia Rivera 6, Diego Guidolin 7, Luigi F. Agnati 1 and Kjell Fuxe 1,* 1 Department of Neuroscience, Karolinska Institutet, Retzius väg 8, 17177 Stockholm, Sweden; E-Mails: [email protected] (I.B.); [email protected] (W.R.-F.); [email protected] (M.D.P.); [email protected] (L.F.A.) 2 IIIA-CSIC, Artificial Intelligence Research Institute, Spanish National Research Council, 08193 Barcelona, Spain 3 Department of Earth, Life and Environmental Sciences, Section of Physiology, Campus Scientifico Enrico Mattei, Urbino 61029, Italy 4 Department of Physiology, Faculty of Medicine, University of Tartu, Tartu 50411, Estonia; E-Mail: [email protected] 5 Laboratory of Eukaryotic Gene Expression and Signal Transduction (LEGEST), Ghent University, 9000 Ghent, Belgium; E-Mails: [email protected] (K.S.); [email protected] (J.D.); [email protected] (K.V.C.) 6 Department of Cell Biology, School of Science, University of Málaga, 29071 Málaga, Spain; E-Mails: [email protected] (D.S.-B.); [email protected] (A.R.) 7 Department of Molecular Medicine, University of Padova, Padova 35121, Italy; E-Mail: [email protected] † These authors contributed equally to this work.