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Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
Minireview Snow Molds: a Group of Fungi That Prevail Under Snow
Microbes Environ. Vol. 24, No. 1, 14–20, 2009 http://wwwsoc.nii.ac.jp/jsme2/ doi:10.1264/jsme2.ME09101 Minireview Snow Molds: A Group of Fungi that Prevail under Snow NAOYUKI MATSUMOTO1* 1Department of Planning and Administration, National Agricultural Research Center for Hokkaido Region, 1 Hitsujigaoka, Toyohira-ku, Sapporo 062–8555, Japan (Received January 5, 2009—Accepted January 30, 2009—Published online February 17, 2009) Snow molds are a group of fungi that attack dormant plants under snow. In this paper, their survival strategies are illustrated with regard to adaptation to the unique environment under snow. Snow molds consist of diverse taxonomic groups and are divided into obligate and facultative fungi. Obligate snow molds exclusively prevail during winter with or without snow, whereas facultative snow molds can thrive even in the growing season of plants. Snow molds grow at low temperatures in habitats where antagonists are practically absent, and host plants deteriorate due to inhibited photosynthesis under snow. These features characterize snow molds as opportunistic parasites. The environment under snow represents a habitat where resources available are limited. There are two contrasting strategies for resource utilization, i.e., individualisms and collectivism. Freeze tolerance is also critical for them to survive freezing temper- atures, and several mechanisms are illustrated. Finally, strategies to cope with annual fluctuations in snow cover are discussed in terms of predictability of the habitat. Key words: snow mold, snow cover, low temperature, Typhula spp., Sclerotinia borealis Introduction Typical snow molds have a distinct life cycle, i.e., an active phase under snow and a dormant phase from spring to In northern regions with prolonged snow cover, plants fall. -
A Checklist of Clavarioid Fungi (Agaricomycetes) Recorded in Brazil
A checklist of clavarioid fungi (Agaricomycetes) recorded in Brazil ANGELINA DE MEIRAS-OTTONI*, LIDIA SILVA ARAUJO-NETA & TATIANA BAPTISTA GIBERTONI Departamento de Micologia, Universidade Federal de Pernambuco, Av. Nelson Chaves s/n, Recife 50670-420 Brazil *CORRESPONDENCE TO: [email protected] ABSTRACT — Based on an intensive search of literature about clavarioid fungi (Agaricomycetes: Basidiomycota) in Brazil and revision of material deposited in Herbaria PACA and URM, a list of 195 taxa was compiled. These are distributed into six orders (Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales) and 12 families (Aphelariaceae, Auriscalpiaceae, Clavariaceae, Clavulinaceae, Gomphaceae, Hymenochaetaceae, Lachnocladiaceae, Lentariaceae, Lepidostromataceae, Physalacriaceae, Pterulaceae, and Typhulaceae). Among the 22 Brazilian states with occurrence of clavarioid fungi, Rio Grande do Sul, Paraná and Amazonas have the higher number of species, but most of them are represented by a single record, which reinforces the need of more inventories and taxonomic studies about the group. KEY WORDS — diversity, taxonomy, tropical forest Introduction The clavarioid fungi are a polyphyletic group, characterized by coralloid, simple or branched basidiomata, with variable color and consistency. They include 30 genera with about 800 species, distributed in Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales (Corner 1970; Petersen 1988; Kirk et al. 2008). These fungi are usually humicolous or lignicolous, but some can be symbionts – ectomycorrhizal, lichens or pathogens, being found in temperate, subtropical and tropical forests (Corner 1950, 1970; Petersen 1988; Nelsen et al. 2007; Henkel et al. 2012). Some species are edible, while some are poisonous (Toledo & Petersen 1989; Henkel et al. 2005, 2011). Studies about clavarioid fungi in Brazil are still scarce (Fidalgo & Fidalgo 1970; Rick 1959; De Lamônica-Freire 1979; Sulzbacher et al. -
Typhula Quisquiliaris (Fr.) Henn., Bot
© Miguel Ángel Ribes Ripoll [email protected] Condiciones de uso Typhula quisquiliaris (Fr.) Henn., Bot. Jb. 23: 288 (1896) Typhulaceae, Agaricales, Agaricomycetidae, Agaricomycetes, Agaricomycotina, Basidiomycota, Fungi ≡ Pistillaria quisquiliaris (Fr.) Fr. = Clavaria obtusa Sowerby = Geoglossum obtusum (Sowerby) Gray ≡ Clavaria quisquiliaris Fr. ≡ Clavaria quistuiltaris Fr. Material estudiado Tenerife, La Vica, Camino de los Canarios, 28R CS599458, 1045 m, sobre peciolos de helecho Pteridium aquilinum, 22-XII-2010, leg. Justo Caridad, José Cuesta & Miguel Á. Ribes, MAR-221210 65, AH 41412. Descripción macroscópica Basidiomas hasta de 9 mm de alto y 2,5-3 mm en la parte más ancha de la clávula, con estípite estéril y clávula fértil bien diferenciados, de consistencia córnea. La clávula es variable, de subcilíndrica a ovoide o claviforme-piriforme, en ocasiones comprimida y con formas ligeramente curvas, glabra y de color blanco. Estípite ligeramente más largo que la clávula, cilíndrico, blanco, subhialino y ligeramente pubescente en toda su longitud, de 1 mm de grosor, desarrollándose a partir de un esclerocio oblongo-elipsoidal, con la cutícula delgada de color amarillento claro e interior grisáceo-rosado, relativamente grande, de 2-3 mm de longitud y 0,4-0,6 mm de ancho, profundamente inmerso en el interior del tallo vegetal en sentido longitudinal. Descripción microscópica Basidios claviformes con cuatro esterigmas y fíbula basal Basidiosporas cilíndrico-elipsoidales, ligeramente cóncavas en la cara interna, lisas, hialinas, con apícula corta, amiloides, de (8,1) 8,9 – 10,9 (12,0) x (3,4) 3,8 – 4,4 (5,1) µm; Q = (2,1) 2,2 – 2,7 (2,9); N = 67; Me = 9,8 x 4,1 µm; Qe = 2,4. -
Clavarioid Fungi of the Urals. II. the Nemoral Zone
Karstenia 47: 5–16, 2007 Clavarioid fungi of the Urals. II. The nemoral zone ANTON G. SHIRYAEV SHIRYAEV, A. 2007: Clavarioid fungi of the Urals. II. The nemoral zone. – Karstenia 47: 5–16. 2007. Helsinki. ISSN 0453-3402. One hundred and eighteen clavarioid species are reported from the nemoral zone of the Ural Mts.. Eight of them, Ceratellopsis aculeata, C. terrigena, Lentaria corticola, Pistillaria quercicola, Ramaria broomei, R. lutea, R. subtilis and Typhula hyalina, are reported for the fi rst time from Russia. The material consists of 1300 collections and observations, and according to these, the most frequent species are Clavulina cinerea, Macrotyphula. juncea, Typhula erythropus, T. sclerotioides, T. uncialis and T. variabilis. These contain ca. 23 % of all observations, but only 5 % of all the species. In comparison with the boreal zone of the Urals, the nemoral zone consists less abundant species (1.7% / 14.6%) and an more rare species (47.8% / 38.2%). Species like Clavulinopsis aurantio- cinnabarina, Pistillaria quercicola, Ramaria broomei, R. lutea and Sparassis brevipes are considered to be relicts of Pliocen and Holocen periods. The most favorable habitats for the rare and relict species are discussed. The collecting sites are briefl y described and descriptions of the new and rare species for Russia are given. Key words: Aphyllophorales, Basidiomycetes, clavarioid fungi, distribution, nemoral, relicts, Ural Anton Shiryaev, Institute of Plant and Animal Ecology RAS, 8 March str. 202, 620144, Ekaterinburg, Russia Introduction The Northern subzone of the nemoral zone, like fungi associated mainly with the nemoral zone. also the hemiboreal zone, are widely distributed The delimitation between the southern parts of in Central Europe but in easternmost Europe hemiboreal zone and northern parts of nemoral represented just as narrow strips on the west- zone is often extremely diffi cult, and in the area ern slopes of the South Ural Mountains (Sjörs somewhat vague. -
Macrotyphula Aff Juncea
© Miguel Ángel Ribes Ripoll [email protected] Condiciones de uso Macrotyphula aff. juncea (Alb. & Schwein.) Berthier, Bull. mens. Soc. linn. Lyon 43(6): 186 (1974) COROLOGíA Registro/Herbario Fecha Lugar Hábitat MAR-260610 51 26/06/2010 El Cerro – Pista del Rayo, Sobre hojas en descomposición de acebino (Ilex Leg.: Domingo Chávez, Manuel Morales, La Vica (Tenerife) canariensis), sin descartar hojas de laurel (Laurus Rubén Negrín, José Cuesta y Miguel Á. Ribes 1186 m. 28R CS620458 novocanariensis) en el interior de un bosque de fayal- Det.: brezal TAXONOMíA Basiónimo: Clavaria triuncialis var. juncea Alb. & Schewin. 1805. Posición en la clasificación: Typhulaceae, Agaricales, Agaricomycetidae, Agaricomycetes, Basidiomycota, Fungi Citas en listas publicadas: Index of Fungi 4: 279 Sinónimos: o Clavaria hortulana Velen., České Houby 4-5: 785 (1922) o Clavaria juncea (Alb. & Schwein.) Fr., Observ. mycol. (Havniae) 2: 291 (1818) o Clavaria juncea var. vivipara Bull., Hist. Champ. France (Paris): 215, tab. 463, fig. H (1791) o Clavariadelphus junceus (Alb. & Schwein.) Corner, Monograph of Clavaria and allied Genera (Annals of Botany Memoirs No. 1): 275 (1950) o Pistillaria oleae (Maire) Corner, Ann. Bot. Mem. 1: 485 (1950) o Typhula juncea (Alb. & Schwein.) P. Karst., Bidr. Känn. Finl. Nat. Folk 37: 181 (1882) o Typhula oleae Maire, Bull. trimest. Soc. mycol. Fr. 44: 53 (1928) o Typhula ramentacea Fr., Syst. mycol. (Lundae) 1: 496 (1821) DESCRIPCIÓN MACRO Basidiomas hasta de 50 x 1 mm, con estípite estéril y clávula fértil, bien diferenciados. Clávula cilíndrica afilada hacia el ápice de color beige-rosado a marrón claro, oscureciéndose hacia el ápice, cubierta por una pruina blanquecina. -
An Annotated Catalogue of the Fungal Biota of the Roztocze Upland Monika KOZŁOWSKA, Wiesław MUŁENKO Marcin ANUSIEWICZ, Magda MAMCZARZ
An Annotated Catalogue of the Fungal Biota of the Roztocze Upland Fungal Biota of the An Annotated Catalogue of the Monika KOZŁOWSKA, Wiesław MUŁENKO Marcin ANUSIEWICZ, Magda MAMCZARZ An Annotated Catalogue of the Fungal Biota of the Roztocze Upland Richness, Diversity and Distribution MARIA CURIE-SkłODOWSKA UNIVERSITY PRESS POLISH BOTANICAL SOCIETY Grzyby_okladka.indd 6 11.02.2019 14:52:24 An Annotated Catalogue of the Fungal Biota of the Roztocze Upland Richness, Diversity and Distribution Monika KOZŁOWSKA, Wiesław MUŁENKO Marcin ANUSIEWICZ, Magda MAMCZARZ An Annotated Catalogue of the Fungal Biota of the Roztocze Upland Richness, Diversity and Distribution MARIA CURIE-SkłODOWSKA UNIVERSITY PRESS POLISH BOTANICAL SOCIETY LUBLIN 2019 REVIEWER Dr hab. Małgorzata Ruszkiewicz-Michalska COVER DESIN, TYPESETTING Studio Format © Te Authors, 2019 © Maria Curie-Skłodowska University Press, Lublin 2019 ISBN 978-83-227-9164-6 ISBN 978-83-950171-8-6 ISBN 978-83-950171-9-3 (online) PUBLISHER Polish Botanical Society Al. Ujazdowskie 4, 00-478 Warsaw, Poland pbsociety.org.pl Maria Curie-Skłodowska University Press 20-031 Lublin, ul. Idziego Radziszewskiego 11 tel. (81) 537 53 04 wydawnictwo.umcs.eu [email protected] Sales Department tel. / fax (81) 537 53 02 Internet bookshop: wydawnictwo.umcs.eu [email protected] PRINTED IN POLAND, by „Elpil”, ul. Artyleryjska 11, 08-110 Siedlce AUTHOR’S AFFILIATION Department of Botany and Mycology, Maria Curie-Skłodowska University, Lublin Monika Kozłowska, [email protected]; Wiesław -
Filo Order Family Species Trophic Group Host Species UEVH- FUNGI Novelties Post-Fire Spp. Occurrence
Biodiversity Data Journal Macrofungi of Mata da Margaraça (Portugal), A Relic from the Tertiary Age Bruno Natário1, Rogério Louro1, Celeste Santos-Silva1 1Biology Department, Macromycology Laboratory, Instituto de Ciências Agrárias e Ambientais Mediterrânicas, University of Évora, 7002-554 ÉVORA, Portugal Table 1. Ascomycota and Basidiomycota macrofungi recorded in Mata da Margaraça. Species are arranged alphabetically according to higher taxonomic placement (Filo, Order and Family). Trophic group; P: parasitic; S: saprophytic; M: mycorrhizal. Host species (putative host); C: Castanea sativa ; E: Eucalypthus spp.; H: Stereum spp.; I: Ilex aquifolium P: Pinus pinaster ; Q: Quercus robur ; T: Thaumetophoea pityocampa ; Z: Peniophora spp. UEVH_FUNGI; Herbarium accession number or p.c.: private collection . Novelties; N: novelties to Portugal; n: novelties to Beira Litoral. Occurrence; 1: recorded only in one of the two studies; 2: recorded in the two studies. Filo Order Family Species Trophic group Host species UEVH- FUNGI Novelties Post-fire spp. Occurrence Ascomycota Incertae sedis Incerta sedis Thyronectria aquifolii (Fr.) Jaklitsch & Voglmayr P I 2004687 N 1 Geoglossales Geoglossaceae Geoglossum umbratile Sacc. S p.c. N 1 Helotiales Leotiaceae Leotia lubrica (Scop.) Pers. S p.c. n 1 Helotiaceae Bisporella citrina (Batsch) Korf & S.E. Carp. S 2004460 N 2 Rutstroemiaceae Lanzia echinophila (Bull.) Korf S p.c. n 1 Rutstroemia firma (Pers.) P. Karst. S 2004527 n 2 Sclerotiniaceae Moellerodiscus lentus (Berk. & Broome) Dumont S 2004148 N 1 Hypocreales Cordycipitaceae Cordyceps militaris (L.) Fr. P T 2004214 n 1 Leotiales Bulgariaceae Bulgaria inquinans (Pers.) Fr. S 2004450 N 1 Pezizales Ascobolaceae Ascobolus carbonarius P. Karst. S 2004096 N X 1 Helvellaceae Helvella elastica Bull. -
(Agaricales) in New Zealand, Including Tricholomopsis Scabra Sp. Nov
Phytotaxa 288 (1): 069–076 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2016 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.288.1.7 The fungal genus Tricholomopsis (Agaricales) in New Zealand, including Tricholomopsis scabra sp. nov. JERRY A. COOPER1* & DUCKCHUL PARK2 1 Landcare Research, PO Box 69040, Lincoln 7640, New Zealand 2 Landcare Research, Private Bag 92170, Auckland 1142, New Zealand *e-mail: [email protected] Abstract The status of the genus Tricholomopsis (Agaricales) in New Zealand is reviewed. T. rutilans is a species described from the northern hemisphere and recorded from plantations of exotic Pinus radiata in New Zealand. Historical collections identified as T. rutilans were subjected to morphological and phylogenetic analysis. The results show that most of these collections refer to T. ornaticeps, originally described from New Zealand native forests. The presence in New Zealand of T. rutilans was not confirmed. Collections of Tricholomopsis from native forests and bush also include a newly described species, T. scabra, which is characterised by a distinctly scabrous pileus. The new species is phylogenetically and morphologically distinct but related to T. ornaticeps. T. ornaticeps and T. scabra are currently known only from New Zealand and the former has extended its habitat to include exotic conifer plantations. Keywords: conifer plantations, Pinus radiata, Southern Hemisphere, Tricholomopsis rutilans, Agaricales Introduction Tricholomopsis Singer (1939: 56) is a genus of saprophytic agaricoid fungi with yellow lamellae, a fibrillose or squamulose dry pileus with red or yellow tones, and it is usually associated with decaying wood. -
Aphyllophorales
Typhulaceae 16-03-2021 Jean Werts & Joke De Sutter Typhulaceae Bron: cursus mycologie Mieke Verbeeken • Alfabetische index • Typhulaceae genera alfabetisch • Typhulaceae foto’s & hyperlinken • Bibliografie Typhulaceae genera alfebetisch Macrotyphula Knotszwam Sclerotium Typhula Knotsje genus Macrotyphula - Knotszwam • Macrotyphula foto’s & hyperlinken • Macrotyphula soorten lage landen Macrotyphula soorten lage landen Macrotyphula fistulosa Pijpknotszwam Macrotyphula juncea Draadknotszwam Genus Sclerotium • Sclerotium foto’s & hyperlinken • Sclerotium soorten lage landen Sclerotium soorten lage landen Sclerotium albidum Sclerotium albiguum Sclerotium brassicae Sclerotium bulborum Sclerotium cacticola Sclerotium cepivorum Sclerotium clavus Sclerotium compactum Sclerotium complanatum Sclerotium corrugatum Sclerotium soorten lage landen Sclerotium crustuliforme Sclerotium delphinii Sclerotium durum Sclerotium fibrillosum Sclerotium gladioli Sclerotium hydrophilum Sclerotium leiodermum Sclerotium lilacearum Sclerotium medullosum Sclerotium muscorum Sclerotium soorten lage landen Sclerotium narcissi Sclerotium nicotianae Sclerotium patouillardii Sclerotium perniciosum Sclerotium pezizaeforme Sclerotium pustula Sclerotium pyrinum Sclerotium rhizodes Sclerotium rolfsii Sclerotium semen Sclerotium soorten lage landen Sclerotium sinapispermum Sclerotium subterraneum Sclerotium tectum Sclerotium tuliparum Sclerotium uvae Sclerotium variegatum Sclerotium varium Sclerotium wakkeri genus Typhula - Knotsje • Typhula foto’s & hyperlinken • Typhula soorten -
Diversity and Distribution of Clavarioid Fungi in Estonia
Folia Cryptog. Estonica, Fasc. 45: 65–80 (2009) Diversity and distribution of clavarioid fungi in Estonia Anton Shiryaev Institute of Plant and Animal Ecology, Ural Division of the Russian Academy of Sciences, 202 8-March St. , RUS-620144 Ekaterinburg, Russia E-mail: [email protected] Abstract: This paper attempts to compile available data on Estonian clavarioid fungi (Basidiomycota) published between 1856 and 2006 (78 publications) and 986 herbarium specimens studied and observations. 103 species have been reported including 46 species new for Estonia. The most frequent species is Typhula erythropus, followed by Macrotyphula juncea, Typhula setipes, Clavulina cinerea, Clavariadelphus ligula, Ramaria gracilis and Typhula phacorrhiza. These constitute around 28% of all observations, but only 6.8% of all species. Twenty one species (20.6%) were collected only once, fifteen species (14.7%) twice and ten species three times (9.8%). Some species rare for whole Europe, but also for its hemiboreal zone, are also infrequently collected, like Clavaria zollingeri, Clavulina amethystina, Lentaria subcaulescens, Multiclavula mucida, Ra- maria botrytis, Ramariopsis crocea, Ramariopsis pulchella and Sparassis crispa. Rare and threatened are the old-growth habitats species like, e.g., Clavaria amoenoides, Clavaria rosea, Clavulinopsis rufipes, Clavulinopsis umbrinella, Multiclavula corynoides, Ramaria broomei and Typhula sphaeroidea. Kokkuvõte: Harikulaadsete kandseente mitmekesisus ja levik Eestis Kirjutises on kokku võetud Eesti harikuliselaadsete kandseente kohta käivad 78 trükises avaldatud andmed (1856–2006), 986 herbaareksemplari uurimise tulemused ja autori vaatlused. Eestist on leitud 103 liiki, neist 46 märgitakse siin esmakordselt. Sagedaim liik on Typhula erythropus, järgnevad Macrotyphula juncea, Typhula setipes, Clavulina cinerea, Clavariadelphus ligula, Ramaria gracilis ja Typhula phacorrhiza. -
Characterising Plant Pathogen Communities and Their Environmental Drivers at a National Scale
Lincoln University Digital Thesis Copyright Statement The digital copy of this thesis is protected by the Copyright Act 1994 (New Zealand). This thesis may be consulted by you, provided you comply with the provisions of the Act and the following conditions of use: you will use the copy only for the purposes of research or private study you will recognise the author's right to be identified as the author of the thesis and due acknowledgement will be made to the author where appropriate you will obtain the author's permission before publishing any material from the thesis. Characterising plant pathogen communities and their environmental drivers at a national scale A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy at Lincoln University by Andreas Makiola Lincoln University, New Zealand 2019 General abstract Plant pathogens play a critical role for global food security, conservation of natural ecosystems and future resilience and sustainability of ecosystem services in general. Thus, it is crucial to understand the large-scale processes that shape plant pathogen communities. The recent drop in DNA sequencing costs offers, for the first time, the opportunity to study multiple plant pathogens simultaneously in their naturally occurring environment effectively at large scale. In this thesis, my aims were (1) to employ next-generation sequencing (NGS) based metabarcoding for the detection and identification of plant pathogens at the ecosystem scale in New Zealand, (2) to characterise plant pathogen communities, and (3) to determine the environmental drivers of these communities. First, I investigated the suitability of NGS for the detection, identification and quantification of plant pathogens using rust fungi as a model system.