Color Pattern and Morphological Features of Dwarf Loach, Kichulchoia Brevifasciata (Pisces: Cobitidae) from Korea
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Korean Red List of Threatened Species Korean Red List Second Edition of Threatened Species Second Edition Korean Red List of Threatened Species Second Edition
Korean Red List Government Publications Registration Number : 11-1480592-000718-01 of Threatened Species Korean Red List of Threatened Species Korean Red List Second Edition of Threatened Species Second Edition Korean Red List of Threatened Species Second Edition 2014 NIBR National Institute of Biological Resources Publisher : National Institute of Biological Resources Editor in President : Sang-Bae Kim Edited by : Min-Hwan Suh, Byoung-Yoon Lee, Seung Tae Kim, Chan-Ho Park, Hyun-Kyoung Oh, Hee-Young Kim, Joon-Ho Lee, Sue Yeon Lee Copyright @ National Institute of Biological Resources, 2014. All rights reserved, First published August 2014 Printed by Jisungsa Government Publications Registration Number : 11-1480592-000718-01 ISBN Number : 9788968111037 93400 Korean Red List of Threatened Species Second Edition 2014 Regional Red List Committee in Korea Co-chair of the Committee Dr. Suh, Young Bae, Seoul National University Dr. Kim, Yong Jin, National Institute of Biological Resources Members of the Committee Dr. Bae, Yeon Jae, Korea University Dr. Bang, In-Chul, Soonchunhyang University Dr. Chae, Byung Soo, National Park Research Institute Dr. Cho, Sam-Rae, Kongju National University Dr. Cho, Young Bok, National History Museum of Hannam University Dr. Choi, Kee-Ryong, University of Ulsan Dr. Choi, Kwang Sik, Jeju National University Dr. Choi, Sei-Woong, Mokpo National University Dr. Choi, Young Gun, Yeongwol Cave Eco-Museum Ms. Chung, Sun Hwa, Ministry of Environment Dr. Hahn, Sang-Hun, National Institute of Biological Resourses Dr. Han, Ho-Yeon, Yonsei University Dr. Kim, Hyung Seop, Gangneung-Wonju National University Dr. Kim, Jong-Bum, Korea-PacificAmphibians-Reptiles Institute Dr. Kim, Seung-Tae, Seoul National University Dr. -
Genomic Replacement of Native Cobitis Lutheri with Introduced C
Genomic replacement of native Cobitis lutheri with introduced C. tetralineata through a hybrid swarm following the artificial connection of river systems Ye-Seul Kwan1, Myeong-Hun Ko1 & Yong-Jin Won1,2 1Division of EcoScience and 2Department of Life Science, Ewha Womans University, 52, Ewhayeodae-gil, Seodaemun-gu, Seoul, Korea Keywords Abstract Artificial river connection, Cobitis lutheri, Cobitis tetralineata, genetic replacement, River connections via artificial canals will bring about secondary contacts between hybrid swarm, introduced non-native species. previously isolated fish species. Here, we present a genetic consequence of such a secondary contact between Cobitis fish species, C. lutheri in the Dongjin River, and Correspondence C. tetralineata in the Seomjin River in Korea. The construction of water canals Yong-Jin Won, Division of EcoScience and about 80 years ago has unidirectionally introduced C. tetralineata into the native Department of Life Science, Ewha Womans habitat of C. lutheri, and then these species have hybridized in the main stream University, 52, Ewhayeodae-gil, Seodaemun-gu, section of the Dongjin River. According to the divergence population genetic Seoul, Korea. Tel: +82 2 3277 4471; Fax: +82 2 3277 4514; E-mail: [email protected] analyses of DNA sequence data, the two species diverged about 3.3 million years ago, which is interestingly coincident with the unprecedented paleoceanographic Funding Information change that caused isolations of the paleo-river systems in northeast Asia due to This research was supported by the Basic sea-level changes around the late Pliocene. Multilocus genotypic data of nine Science Research Program through the microsatellites and three nuclear loci revealed an extensively admixed structure in National Research Foundation of Korea (NRF) the hybrid zone with a high proportion of various post-F1 hybrids. -
Fishes of the World
Fishes of the World Fishes of the World Fifth Edition Joseph S. Nelson Terry C. Grande Mark V. H. Wilson Cover image: Mark V. H. Wilson Cover design: Wiley This book is printed on acid-free paper. Copyright © 2016 by John Wiley & Sons, Inc. All rights reserved. Published by John Wiley & Sons, Inc., Hoboken, New Jersey. Published simultaneously in Canada. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, scanning, or otherwise, except as permitted under Section 107 or 108 of the 1976 United States Copyright Act, without either the prior written permission of the Publisher, or authorization through payment of the appropriate per-copy fee to the Copyright Clearance Center, 222 Rosewood Drive, Danvers, MA 01923, (978) 750-8400, fax (978) 646-8600, or on the web at www.copyright.com. Requests to the Publisher for permission should be addressed to the Permissions Department, John Wiley & Sons, Inc., 111 River Street, Hoboken, NJ 07030, (201) 748-6011, fax (201) 748-6008, or online at www.wiley.com/go/permissions. Limit of Liability/Disclaimer of Warranty: While the publisher and author have used their best efforts in preparing this book, they make no representations or warranties with the respect to the accuracy or completeness of the contents of this book and specifically disclaim any implied warranties of merchantability or fitness for a particular purpose. No warranty may be createdor extended by sales representatives or written sales materials. The advice and strategies contained herein may not be suitable for your situation. -
Phylogenetic Classification of Extant Genera of Fishes of the Order Cypriniformes (Teleostei: Ostariophysi)
Zootaxa 4476 (1): 006–039 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2018 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4476.1.4 http://zoobank.org/urn:lsid:zoobank.org:pub:C2F41B7E-0682-4139-B226-3BD32BE8949D Phylogenetic classification of extant genera of fishes of the order Cypriniformes (Teleostei: Ostariophysi) MILTON TAN1,3 & JONATHAN W. ARMBRUSTER2 1Illinois Natural History Survey, University of Illinois Urbana-Champaign, 1816 South Oak Street, Champaign, IL 61820, USA. 2Department of Biological Sciences, Auburn University, 101 Rouse Life Sciences Building, Auburn, AL 36849, USA. E-mail: [email protected] 3Corresponding author. E-mail: [email protected] Abstract The order Cypriniformes is the most diverse order of freshwater fishes. Recent phylogenetic studies have approached a consensus on the phylogenetic relationships of Cypriniformes and proposed a new phylogenetic classification of family- level groupings in Cypriniformes. The lack of a reference for the placement of genera amongst families has hampered the adoption of this phylogenetic classification more widely. We herein provide an updated compilation of the membership of genera to suprageneric taxa based on the latest phylogenetic classifications. We propose a new taxon: subfamily Esom- inae within Danionidae, for the genus Esomus. Key words: Cyprinidae, Cobitoidei, Cyprinoidei, carps, minnows Introduction The order Cypriniformes is the most diverse order of freshwater fishes, numbering over 4400 currently recognized species (Eschmeyer & Fong 2017), and the species are of great interest in biology, economy, and in culture. Occurring throughout North America, Africa, Europe, and Asia, cypriniforms are dominant members of a range of freshwater habitats (Nelson 2006), and some have even adapted to extreme habitats such as caves and acidic peat swamps (Romero & Paulson 2001; Kottelat et al. -
Phylogenetic Classification of Extant Genera of Fishes of the Order Cypriniformes (Teleostei: Ostariophysi)
Zootaxa 4476 (1): 006–039 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2018 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4476.1.4 http://zoobank.org/urn:lsid:zoobank.org:pub:C2F41B7E-0682-4139-B226-3BD32BE8949D Phylogenetic classification of extant genera of fishes of the order Cypriniformes (Teleostei: Ostariophysi) MILTON TAN1,3 & JONATHAN W. ARMBRUSTER2 1Illinois Natural History Survey, University of Illinois Urbana-Champaign, 1816 South Oak Street, Champaign, IL 61820, USA. 2Department of Biological Sciences, Auburn University, 101 Rouse Life Sciences Building, Auburn, AL 36849, USA. E-mail: [email protected] 3Corresponding author. E-mail: [email protected] Abstract The order Cypriniformes is the most diverse order of freshwater fishes. Recent phylogenetic studies have approached a consensus on the phylogenetic relationships of Cypriniformes and proposed a new phylogenetic classification of family- level groupings in Cypriniformes. The lack of a reference for the placement of genera amongst families has hampered the adoption of this phylogenetic classification more widely. We herein provide an updated compilation of the membership of genera to suprageneric taxa based on the latest phylogenetic classifications. We propose a new taxon: subfamily Esom- inae within Danionidae, for the genus Esomus. Key words: Cyprinidae, Cobitoidei, Cyprinoidei, carps, minnows Introduction The order Cypriniformes is the most diverse order of freshwater fishes, numbering over 4400 currently recognized species (Eschmeyer & Fong 2017), and the species are of great interest in biology, economy, and in culture. Occurring throughout North America, Africa, Europe, and Asia, cypriniforms are dominant members of a range of freshwater habitats (Nelson 2006), and some have even adapted to extreme habitats such as caves and acidic peat swamps (Romero & Paulson 2001; Kottelat et al. -
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Yu et al. BMC Genomics (2021) 22:50 https://doi.org/10.1186/s12864-020-07360-w RESEARCH ARTICLE Open Access Comparative mitogenome analyses uncover mitogenome features and phylogenetic implications of the subfamily Cobitinae Peng Yu1,2, Li Zhou1,2, Wen-Tao Yang1,2, Li-jun Miao1,2, Zhi Li1, Xiao-Juan Zhang1, Yang Wang1,2* and Jian-Fang Gui1,2* Abstract Background: Loaches of Cobitinae, widely distributed in Eurasian continent, have high economic, ornamental and scientific value. However, the phylogeny of Cobitinae fishes within genera or family level remains complex and controversial. Up to now, about 60 Cobitinae mitogenomes had been deposited in GenBank, but their integrated characteristics were not elaborated. Results: In this study, we sequenced and analyzed the complete mitogenomes of a female Cobits macrostigma. Then we conducted a comparative mitogenome analysis and revealed the conserved and unique characteristics of 58 Cobitinae mitogenomes, including C. macrostigma. Cobitinae mitogenomes display highly conserved tRNA secondary structure, overlaps and non-coding intergenic spacers. In addition, distinct base compositions were observed among different genus and significantly negative linear correlation between AT% and AT-skew were found among Cobitinae, genus Cobitis and Pangio mitogenomes, respectively. A specific 3 bp insertion (GCA) in the atp8-atp6 overlap was identified as a unique feature of loaches, compared to other Cypriniformes fish. Additionally, all protein coding genes underwent a strong purifying selection. Phylogenetic analysis strongly supported the paraphyly of Cobitis and polyphyly of Misgurnus. The strict molecular clock predicted that Cobitinae might have split into northern and southern lineages in the late Eocene (42.11 Ma), furthermore, mtDNA introgression might occur (14.40 Ma) between ancestral species of Cobitis and ancestral species of Misgurnus. -
CO1 Gene Based Identifica Analysis of Two Fresh Water Fis And
Merit Research Journal of Agricultural Science and Soil Sciences (ISSN: 2350 -2274) Vol. 6(3) pp. 024-031 , March, 2018 Available online http://meritresearchjournals.org/asss/index.htm Copyright © 2018 Merit Research Journals Original Research Article CO1 gene based identification and phylogenetic analysis of two fresh water fish species Labeogonius and Cirrhinusmrigala (family: Cyprinidae) from R iver Ravi, Punjab, Pakistan 1Asma Karim, 2,3 Rashid Saif, 1Zohaib Gill, 1Faisal Salamat Ali, 1Rida Fatima and 1Asem Razzaq Abstract 1Department of Zoology, Govt. Taxonomy has always been a challenging job for the scientists. Traditional College of Science, Wahdat Road, methods for identification of fishes are based on morphological features Lahore, Pakistan which sometimes create great confusion due to great morphological similarities in closed species. DNA barcoding is a modern species 2Institute of Biotechnology, Gulab Devi identification method in which a short standardized mitochondrial DNA Educational Complex, Ferozepur Road, Lahore, Pakistan region is u sed. In this method sequence diversity in a 658 base pair fragment near the 5 ′ end of the mitochondrial Cytochrome C Oxidase 1 3Decode Genomics, 264- Q, Johar (CO1 ) gene is employed as a tool for species identification. This method is Town, Lahore, Pakistan capable enough for identification of processed, preserved and damaged fishes as compared to traditional morphometric methods and is also *Corresponding Author’s Email: appropriate for rapid identification of juveniles as well as adult sta ges of [email protected] fishes. Present study is conducted to identify two fresh water fishes, Labeogonius and Cirrhinusmrigala on basis of CO1 gene.Partial sequences of CO1 gene of these fishes were amplified by conventional PCR method and BLAST analysis confirmed that genetically identified fishes a re the same fishes which were identified morphologically at the b eginning of the study with the help of identification key. -
Northern Pike (Esox Lucius), and Sheatfish (Silurus Glanis) Fillets
Acta Ichthyologica et Piscatoria 51(2), 2021, 119–129 | DOI 10.3897/aiep.51.63281 A nitrogen factor for European pike-perch (Sander lucioperca), northern pike (Esox lucius), and sheatfish (Silurus glanis) fillets Alena HONZLOVA1, Helena CURDOVA1, Lenka SCHEBESTOVA1, Alzbeta STARA2, Josef PRIBORSKY2, Anna KOUBOVA2, Zdenka SVOBODOVA2, Josef VELISEK2 1 State Veterinary Institute Jihlava, Jihlava, Czech Republic 2 University of South Bohemia in Ceske Budejovice, Faculty of Fisheries and Protection of Waters, South Bohemian Research Center of Aquaculture and Biodiversity of Hydrocenoses, Research Institute of Fish Culture and Hydrobiology Vodnany, Vodnany, Czech Republic http://zoobank.org/DA43B616-D17B-4D49-8B88-2F008974B2CD Corresponding author: Josef VELISEK ([email protected]) Academic editor: J. Kiełpińska ♦ Received 8 July 2020 ♦ Accepted 19 December 2020 ♦ Published 8 June 2021 Citation: Honzlova A, Curdova H, Schebestova L, Stara A, Priborsky J, Koubova A, Svobodova Z, Velisek J (2021) A nitrogen factor for European pike-perch (Sander lucioperca), northern pike (Esox lucius), and sheatfish Silurus( glanis) fillets. Acta Ichthyologica et Piscatoria 51(2): 119–129. https://doi.org/10.3897/aiep.51.63281 Abstract Measures for consumer protection against food adulteration and misleading labeling are integrated into EU legislation, including methods for detection of misleading practices. Verification of meat content is available for marine products but not for freshwater fish because of the lack of standard nitrogen factors. The aim of this study was to establish nitrogen factors for European pike-perch Sander lucioperca (Linnaeus, 1758), northern pike Esox lucius Linnaeus, 1758, and sheatfish Silurus glanis Linnaeus, 1758. The study involved analysis of 808 fillet samples obtained in spring (March–April) and autumn (October–November) harvest seasons, 2018–2019, from seven Czech Republic fish rearing facilities. -
First Report on the Spawning Behaviour of a Golden Spined Loach, Sabanejewia Vallachica (Teleostei: Cobitidae)
Folia Zool. – 57(1–2): 139–146 (2008) First report on the spawning behaviour of a golden spined loach, Sabanejewia vallachica (Teleostei: Cobitidae) Jörg BOHLEN Institute of Animal Physiology and Genetics, Academy of Sciences of the Czech Republic,v.v.i., Rumburská 89, 277 21 Libĕchov, Czech Republic; e-mail: [email protected] Received 23 September 2006 ; Accepted 21 March 2008 Abstract.Very little is known about the spawning behaviour of loach fishes, despite the fact that reproduction is one of the most important aspects in the autecology of animals. Here the spawning behaviour of golden spined loaches of the genus Sabanejewia is described for the first time. In opposite to spined loaches of the genera Cobitis and Misgurnus, the spawning partners do some ‘circle swimming’ together prior to spawning and the male does not form a full ring around the female but catches the female with a ‘V’-shaped body. This spawning behaviour explains why males of Sabanejewia, unlike nearly all other genera of Cobitidae, 1) are not significantly smaller than females, a condition that is required only to form a complete ring around the female, and 2) have swellings in the middle of the body instead of specialised rays of the pectoral fins like in most other genera. These swellings are in the part of the body that touches the female during the release of gametes, while the pectoral fins do not reach to female’s body. Key words: ecology, reproduction, freshwater fish, sexual dimorphism Introduction Morphological characters are most important in the identification and taxonomy of fishes, and the only known facts about many loaches. -
Department of Zoology Faculty of Sciences University of South Bohemia České Budějovice
Department of Zoology Faculty of Sciences University of South Bohemia České Budějovice PhD Thesis Phylogenetic relationships of loach fishes of the superfamily Cobitoidea (Teleostei: Cypriniformes) based on molecular data analyses Vendula Šlechtová České Budějovice 2008 Department of Zoology Faculty of Sciences University of South Bohemia České Budějovice PhD Thesis Phylogenetic relationships of loach fishes of the superfamily Cobitoidea (Teleostei: Cypriniformes) based on molecular data analyses Vendula Šlechtová Supervisors: Doc. Ing. Petr Ráb, DrSc Dipl. Biol. Jörg Bohlen PhD Laboratory of Fish Genetics, Institute of Animal Physiology and Genetics ASCR, Liběchov, Czech Republic České Budějovice 2008 Declaration I hereby declare that I have elaborated the present thesis on my own and that I have listed the used resources of scientific information in the list of literature and acknowledgments. The manuscripts have been completed together with the named co-authors. Prohlášení Prohlašuji, že jsem předloženou disertační práci vypracovala samostatně a že jsem uvedla všechny použité zdroje vědeckých informací v seznamu literatury či poděkování. Rukopisy byly zkompletovány společně s jmenovanými spoluautory. České Budějovice, 28.4.2008 Vendula Šlechtová ANNOTATION Šlechtová, V., 2008. Phylogenetic relationships of loach fishes of the superfamily Cobitoidea (Teleostei: Cypriniformes) based on molecular data analyses. PhD Thesis [in English], Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic. The superfamily Cobitoidea belongs to the largest clade of primary freshwater fishes - the order Cypriniformes and its distribution ranges across most of Eurasia and northernmost parts of Africa. Up to know, there have been very few studies that attempted to solve the systematics and taxonomy of this morphologically highly diverse group. -
Teleostei: Cobitidae)
295 Ichthyol. Explor. Freshwaters, Vol. 21, No. 4, pp. 295-300, 5 figs., December 2010 © 2010 by Verlag Dr. Friedrich Pfeil, München, Germany – ISSN 0936-9902 Microcobitis, a new genus name for Cobitis misgurnoides (Teleostei: Cobitidae) Jörg Bohlen* and Radovan Harant** Microcobitis, new genus, is established with Cobitis misgurnoides Rendahl, 1944 as type species. It is diagnosed by having the lower lip developed into four barbel-like lobes, adult males bearing a lamina circularis at the base of the second pectoral-fin ray, suborbital spine in a groove under the eye and not covered by skin, a pre-epiphysal fontanel between the frontal bones, a cartilaginous epiphysal bar, and the absence of body swellings in males. Introduction differs from all other species of Cobitis in several characters: It is smaller than all other species of The genus Cobitis is the largest and most wide- Cobitis, reaching only up to 41 mm SL, has a spread within the loach family Cobitidae, ranging shorter (29-40 % head length) and more rounded nearly continuously from the Atlantic coast in snout than most Cobitis and bears a midlateral Europe to the Pacific coast in East Asia (Bânâres- row of brown blotches, an unclear mid-dorsal cu, 1991). The genus contains about 30 species row and irregular blotches between these rows. and shows in most cases a rather homogenous Most importantly, it differs from all species of appearance with a slender body up to 180 mm Cobitis in the shape of the lower lip, which is SL, a long snout (37-52 % HL) and four longitu- divided into four barbel-like projections. -
03-A Review(JE)
KOREAN JOURNAL OF ICHTHYOLOGY, Vol. 21 Supplement, 7-28, July 2009 Received : April 21, 2009 ISSN: 1225-8598 Revised : May 13, 2009 Accepted : June 24, 2009 A Review of the Spined Loaches, Family Cobitidae (Cypriniformes) in Korea By Ik-Soo Kim Institute for Biodiversity Research, Chonbuk National University, Jeonju 561-756, Korea ABSTRACT The family Cobitidae of Korea was reviewed as 16 species in 5 genera with the key to species for the identification by the external features. The three genera of Iksookimia, Koreocobitis, and Kichulchoia erected from the genus Cobitis were reclassified based on the presence or absence of Gambetta’s zones on the body sides, their body pigmentation, the shape of lamina circularis in males, the number of unbranched anal fin rays, and some molecular phylogenetic data. By the results of these reexamination, the generic names of the three species were changed as Cobitis choii, Iksookimia paci- fica, and Kichulchoia mutifasciata. It was remarked biogeographically that most species of genera Co- bitis, Iksookimia, Koreocobitis, and Kichulchoia show the disjunct distributions with bottom-dwelling preferences as endemic to Korean peninsular. Three species of Cobitis choii, Kichulchoia brevifasciata, and Koreocobitis naktongensis are considered to be critically endangered according to the severe habi- tat destruction and the alteration of river topography. Key words : Spined loaches, Cobitidae, Cobitis, Iksookimia, Kichulchoia, Koreocobitis, Misgrunus, lamina circularis INTRODUCTION (1939) reviewed in detail 5 species in the genera Cobitis and Misgrunus. Recently many cobitid taxa have conti- The fishes of the family Cobitidae are distributed in the nuously been described from Korea and known in availa- bottoms of freshwaters in the entire temperate Eurasia ble field observations (Kim, 1975; Kim et al., 1976, including the Morocco where about 140 species in 16 1999, 2000, 2003; Kim and Son, 1984; Kim and Lee, genera are recognized.