Phylogenetic Classification of Extant Genera of Fishes of the Order Cypriniformes (Teleostei: Ostariophysi)
Total Page:16
File Type:pdf, Size:1020Kb

Load more
Recommended publications
-
Dynamic Genetic Diversity and Population Structure of Coreius Guichenoti
ZooKeys 1055: 135–148 (2021) A peer-reviewed open-access journal doi: 10.3897/zookeys.1055.70117 RESEARCH ARTICLE https://zookeys.pensoft.net Launched to accelerate biodiversity research Dynamic genetic diversity and population structure of Coreius guichenoti Dongqi Liu1*, Feng Lan2*, Sicai Xie1, Yi Diao1, Yi Zheng1, Junhui Gong1 1 Sichuan Province Key Laboratory of Characteristic Biological Resources of Dry and Hot River Valley, Pan- zhihua University, Panzhihua, 617000, China 2 Upper Changjiang River Burean of Hydrological and Water Resources Survey, Chongqing, 400000, China Corresponding author: Feng Lan ([email protected]) Academic editor: M.E. Bichuette | Received 14 June 2021 | Accepted 27 July 2021 | Published 11 August 2021 http://zoobank.org/ADECA19A-B689-47AE-971B-42913F28F5CE Citation: Liu D, Lan F, Xie S, Diao Y, Zheng Y, Gong J (2021) Dynamic genetic diversity and population structure of Coreius guichenoti. ZooKeys 1055: 135–148. https://doi.org/10.3897/zookeys.1055.70117 Abstract To investigate the genetic effects on the population of Coreius guichenoti of dam constructions in the upper reaches of the Yangtze River, we analyzed the genetic diversity and population structure of 12 popula- tions collected in 2009 and 2019 using mitochondrial DNA (mtDNA) control regions. There was no significant difference in genetic diversity between 2009 and 2019P ( > 0.05), but the population structure tended to become stronger. Genetic differentiation (FST) among five populations (LX, BB, YB, SF and JA) collected in 2009 was not significant P( > 0.05). However, some populations collected in 2019 were significantly differentiated (P < 0.05), indicating that the population structure has undergone change. -
Acanthobrama Telavivensis), in a Mediterranean-Type Stream
Environ Biol Fish DOI 10.1007/s10641-006-9066-8 ORIGINAL PAPER Reproductive strategy of a small endemic cyprinid, the Yarqon bleak (Acanthobrama telavivensis), in a mediterranean-type stream Eldad Elron Æ Avital Gasith Æ Menachem Goren Received: 22 November 2005 / Accepted: 4 April 2006 Ó Springer Science+Business Media B.V. 2006 Abstract A mediterranean-type climate exists in mediterranean-climate hydrologic regime. It five widely separated regions; the Mediterranean breeds in late winter and early spring, a window basin, parts of western North America, parts of of opportunity between flash floods and habitat western and southern Australia, southwestern desiccation. Being a multiple spawner allows the South Africa and parts of central Chile. Streams fish to compensate for the potential loss of part of in these regions feature seasonal disturbances of its reproductive output due to scouring flows of contrasting hydrology with high predictability of late floods. The ability of the Yarqon bleak to the timing of flooding and drying but low con- spawn on different substrate-types enables it to stancy. We would expect fish living in these take advantage of different stream conditions that streams to avoid scouring flow and breed after pertain in different years. The fish attains pre- cessation of the flood period. The aim of the adult size (ca. 33–42 mm) within the first year, present study was to examine the adaptation of prior to drying out of most stream reaches, and the Yarqon bleak, Acanthobrama telavivensis,an matures by the beginning of the second year endemic cyprinid in the coastal streams of Israel, (males >41; females >42 mm). -
Length-Weight Relationship of Ten Species of Leuciscinae Sub-Family (Cyprinidae) from Iranian Inland Waters
Int Aquat Res (2020) 12:133–136 https://doi.org/10.22034/IAR(20).2020.1891648.1004 SHORT COMMUNICATION Length-weight relationship of ten species of Leuciscinae sub-family (Cyprinidae) from Iranian inland waters Soheil Eagderi . Atta Mouludi-Saleh . Erdogan Çiçek Received: 23 January 2020 / Accepted: 16 April 2020 / Published online: 16 May 2020 © The Author(s) 2020 Abstract In this study, the length-weight relationships (LWRs) were estimated for 697 specimens belonging to ten species of Leuciscinae subfamily, viz. Squalius berak, S. namak, S. turcicus, Acanthobrama marmid, A. microlepis, Chondrostoma esmaeilii, Leuciscus latus, Alburnus doriae, Leucaspius delineates and Blicca bjoerkna from Iranian inland waters, including the Persian Gulf, Caspian Sea, Namak Lake, Dasht-e Kavir, Hari River and Isfahan basins. Total length and total weight of the examined specimens ranged 3.8-27.8 cm and 0.59-247 g, respectively. Fishes were collected using electrofishing device between July 2010 and August 2017. This study represents the first reports of LWRs data for A. doriae, C. esmaeilii, L. latus and L. delineates. The length-weight parameter b found to be 2.75 (A. microlepis) - 3.44 (B. bjoerkna) with regression coefficients (r2) ranging 0.87 to 0.99 for the studied fishes. The student’s t-test showed all studied species have a positive allometric growth pattern except A. doriae (isometric) and A. microlepis (negative allometric). Keywords LWRs . Leuciscinae . Chondrostoma esmaeilii . Leuciscus latus Introduction Study of fish species and their populations are important to understand their biological aspects in order to optimal management of their resources (Jalili et al. -
Teleostei: Cyprinidae: Acheilognathinae) from China
Zootaxa 3790 (1): 165–176 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3790.1.7 http://zoobank.org/urn:lsid:zoobank.org:pub:BD573A51-6656-4E86-87C2-2411443C38E5 Rhodeus albomarginatus, a new bitterling (Teleostei: Cyprinidae: Acheilognathinae) from China FAN LI1,3 & RYOICHI ARAI2 1Institute of Biodiversity Science, Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Fudan University, Shanghai 200433, China. E-mail: [email protected] 2Department of Zoology, University Museum, University of Tokyo, 7–3–1 Hongo, Bunkyo-ku, Tokyo. 113-0033, Japan. E-mail: [email protected] 3Corresponding author Abstract Rhodeus albomarginatus, new species, is described from the Lvjiang River, a tributary flowing into Poyang Lake of Yang- tze River basin, in Anhui Province, China. It is distinguished from all congeneric species by unique combination of char- acters: branched dorsal-fin rays 10; branched anal-fin rays 10–11; longest simple rays of dorsal and anal fins strong and stiff, distally segmented; pelvic fin rays i 6; longitudinal scale series 34–36; transverse scale series 11; pored scales 4–7; vertebrae 33–34; colour pattern of adult males (iris black, belly reddish-orange, central part of caudal fin red, dorsal and anal fins of males edged with white margin). Key words: Cyprinidae, Rhodeus albomarginatus, new species, Yangtze River, China Introduction Bitterling belong to the subfamily Acheilognathinae in Cyprinidae and include three genera, Acheilognathus, Rhodeus and Tanakia. The genus Rhodeus can be distinguished from the other two genera by having an incomplete lateral line, no barbels, and wing-like yolk sac projections in larvae (Arai & Akai, 1988). -
Family-Cyprinidae-Gobioninae-PDF
SUBFAMILY Gobioninae Bleeker, 1863 - gudgeons [=Gobiones, Gobiobotinae, Armatogobionina, Sarcochilichthyna, Pseudogobioninae] GENUS Abbottina Jordan & Fowler, 1903 - gudgeons, abbottinas [=Pseudogobiops] Species Abbottina binhi Nguyen, in Nguyen & Ngo, 2001 - Cao Bang abbottina Species Abbottina liaoningensis Qin, in Lui & Qin et al., 1987 - Yingkou abbottina Species Abbottina obtusirostris (Wu & Wang, 1931) - Chengtu abbottina Species Abbottina rivularis (Basilewsky, 1855) - North Chinese abbottina [=lalinensis, psegma, sinensis] GENUS Acanthogobio Herzenstein, 1892 - gudgeons Species Acanthogobio guentheri Herzenstein, 1892 - Sinin gudgeon GENUS Belligobio Jordan & Hubbs, 1925 - gudgeons [=Hemibarboides] Species Belligobio nummifer (Boulenger, 1901) - Ningpo gudgeon [=tientaiensis] Species Belligobio pengxianensis Luo et al., 1977 - Sichuan gudgeon GENUS Biwia Jordan & Fowler, 1903 - gudgeons, biwas Species Biwia springeri (Banarescu & Nalbant, 1973) - Springer's gudgeon Species Biwia tama Oshima, 1957 - tama gudgeon Species Biwia yodoensis Kawase & Hosoya, 2010 - Yodo gudgeon Species Biwia zezera (Ishikawa, 1895) - Biwa gudgeon GENUS Coreius Jordan & Starks, 1905 - gudgeons [=Coripareius] Species Coreius cetopsis (Kner, 1867) - cetopsis gudgeon Species Coreius guichenoti (Sauvage & Dabry de Thiersant, 1874) - largemouth bronze gudgeon [=platygnathus, zeni] Species Coreius heterodon (Bleeker, 1865) - bronze gudgeon [=rathbuni, styani] Species Coreius septentrionalis (Nichols, 1925) - Chinese bronze gudgeon [=longibarbus] GENUS Coreoleuciscus -
ML-DSP: Machine Learning with Digital Signal Processing for Ultrafast, Accurate, and Scalable Genome Classification at All Taxonomic Levels Gurjit S
Randhawa et al. BMC Genomics (2019) 20:267 https://doi.org/10.1186/s12864-019-5571-y SOFTWARE ARTICLE Open Access ML-DSP: Machine Learning with Digital Signal Processing for ultrafast, accurate, and scalable genome classification at all taxonomic levels Gurjit S. Randhawa1* , Kathleen A. Hill2 and Lila Kari3 Abstract Background: Although software tools abound for the comparison, analysis, identification, and classification of genomic sequences, taxonomic classification remains challenging due to the magnitude of the datasets and the intrinsic problems associated with classification. The need exists for an approach and software tool that addresses the limitations of existing alignment-based methods, as well as the challenges of recently proposed alignment-free methods. Results: We propose a novel combination of supervised Machine Learning with Digital Signal Processing, resulting in ML-DSP: an alignment-free software tool for ultrafast, accurate, and scalable genome classification at all taxonomic levels. We test ML-DSP by classifying 7396 full mitochondrial genomes at various taxonomic levels, from kingdom to genus, with an average classification accuracy of > 97%. A quantitative comparison with state-of-the-art classification software tools is performed, on two small benchmark datasets and one large 4322 vertebrate mtDNA genomes dataset. Our results show that ML-DSP overwhelmingly outperforms the alignment-based software MEGA7 (alignment with MUSCLE or CLUSTALW) in terms of processing time, while having comparable classification accuracies for small datasets and superior accuracies for the large dataset. Compared with the alignment-free software FFP (Feature Frequency Profile), ML-DSP has significantly better classification accuracy, and is overall faster. We also provide preliminary experiments indicating the potential of ML-DSP to be used for other datasets, by classifying 4271 complete dengue virus genomes into subtypes with 100% accuracy, and 4,710 bacterial genomes into phyla with 95.5% accuracy. -
Iberian Cyprinids: Habitat Requirements and Vulnerabilities
Session 1 Cyprinid species: ecology and constraints Iberian cyprinids: habitat requirements and vulnerabilities 2nd Stakeholder Workshop – Iberia – Lisboa, Portugal 20.03.2019 Francisco Godinho Hidroerg 20/03/2018 Francisco Godinho 1 Setting the scene 22/03/2018 Francisco Godinho 2 Relatively small river catchmentsIberian fluvial systems Douro/Duero is the largest one, with 97 600 km2 Loire – 117 000 km2, Rhinne -185 000 km2, Vistula – 194 000 km2, Danube22/03/2018 – 817 000 km2, Volga –Francisco 1 380 Godinho 000 km2 3 Most Iberian rivers present a mediterranean hydrological regime (temporary rivers are common) Vascão river, a tributary of the Guadiana river 22/03/2018 Francisco Godinho 4 Cyprinidae are the characteristic fish taxa of Iberian fluvial ecosystems, occurring from mountain streams (up to 1000 m in altitude) to lowland rivers Natural lakes are rare in the Iberian Peninsula and most natural freshwater bodies are rivers and streams 22/03/2018 Francisco Godinho 5 Six fish-based river types have been distinguished in Portugal (INAG and AFN, 2012) Type 1 - Northern salmonid streams Type 2 - Northern salmonid–cyprinid trans. streams Type 3 - Northern-interior medium-sized cyprinid streams Type 4 - Northern-interior medium-sized cyprinid streams Type 5 - Southern medium-sized cyprinid streams Type 6 - Northern-coastal cyprinid streams With the exception of assemblages in small northern, high altitude streams, native cyprinids dominate most unaltered fish assemblages, showing a high sucess in the hidrological singular 22/03/2018 -
Presentación De Powerpoint
Ecological and social restrictions to the restoration of river continuity: invasive species and other limitations Gustavo González (CIREF) This webinar series was supported by the European Commission through LIFE NGO funding Ecological and social restrictions to the restoration of river continuity: invasive species and other limitations Overview 1. The two sides of connectivity recovery 2. Conservation status of freshwater fishes in Europe 3. Invasive Alien Species 4. EU legislation 5. State of the art 6. Practical example 7. Gaps of knowledge and future challenges ECOLOGICAL EFFECTS OF TRANSVERSAL BARRIERS Reduction of habitat heterogeneity Changes in thermal regimen Homogenization of flows Increase substrate stability Increase nutrients and sedimentation Habitat Fragmentation EFFECTS OF THE LOSS OF CONNECTIVITY ON FISH POPULATIONS Isolation: Loss of genetic variation Increase risk of extinction Loss of natural dispersion Prevent individual from moving to feeding areas or shelters Prevent or delay migrations K. Morita, A. Yokota / Ecological Modelling 155 (2002) 85–94 BENEFITS OF ELIMINATING UNNECESSARY DAMS • Recovery of the river’s natural flow regime • Recovery of floodplain and adjacent wetlands • Improvement of water quality • Redistribution of sediments, improvement of fluvial dynamics and renewal of habitats • Recovery of longitudinal connectivity MAINTAINING OR RESTORING CONNECTIVITY CAN • Enhance migratory fish populations • Maintain genetic diversity in small, isolated populations • Allow organisms to access complementary habitats -
Journal of the Bombay Natural History Society
' <«» til 111 . JOURNAL OF THE BOMBAY NATURAL HISTORY SOCIETY Hornbill House, Shaheed Bhagat Singh Marg, Mumbai 400 001 Executive Editor Asad R. Rahmani, Ph. D Bombay Natural History Society, Mumbai Copy and Production Editor Vibhuti Dedhia, M. Sc. Editorial Board M.R. Almeida, D. Litt. T.C. Narendran, Ph. D., D. Sc. Bombay Natural History Society, Mumbai Professor, Department of Zoology, University of Calicut, Kerala Ajith Kumar, Ph. D. National Centre for Biological Sciences, GKVK Campus, Aasheesh Pittie, B. Com. Hebbal, Bangalore Bird Watchers Society of Andhra Pradesh, Hyderabad M.K. Chandrashekaran, Ph. D., D. Sc. Nehru Professor, Jawaharlal Centre G.S. Rawat, Ph. D. for Scientific Research, Advanced Wildlife Institute of India, Dehradun Bangalore K. Rema Devi, Ph. D. Anwaruddin Choudhury, Ph. D., D. Sc. Zoological Survey of India, Chennai The Rhino Foundation for Nature, Guwahati J.S. Singh, Ph. D. Indraneil Das, D. Phil. Professor, Banaras Hindu University, Varanasi Institute of Biodiversity and Environmental Conservation, Universiti Malaysia, Sarawak, Malaysia S. Subramanya, Ph. D. University of Agricultural Sciences, GKVK, P.T. Cherian, Ph. D. Hebbal, Bangalore Emeritus Scientist, Department of Zoology, University of Kerala, Trivandrum R. Sukumar, Ph. D. Professor, Centre for Ecological Sciences, Y.V. Jhala, Ph. D. Indian Institute of Science, Bangalore Wildlife Institute of India, Dehrdun K. Ullas Karanth, Ph. D. Romulus Whitaker, B Sc. Wildlife Conservation Society - India Program, Madras Reptile Park and Crocodile Bank Trust, Bangalore, Karnataka Tamil Nadu Senior Consultant Editor J.C. Daniel, M. Sc. Consultant Editors Raghunandan Chundawat, Ph. D. Wildlife Conservation Society, Bangalore Nigel Collar, Ph. D. BirdLife International, UK Rhys Green, Ph. -
2009 Board of Governors Report
American Society of Ichthyologists and Herpetologists Board of Governors Meeting Hilton Portland & Executive Tower Portland, Oregon 23 July 2009 Maureen A. Donnelly Secretary Florida International University College of Arts & Sciences 11200 SW 8th St. - ECS 450 Miami, FL 33199 [email protected] 305.348.1235 23 June 2009 The ASIH Board of Governor's is scheduled to meet on Wednesday, 22 July 2008 from 1700- 1900 h in Pavillion East in the Hilton Portland and Executive Tower. President Lundberg plans to move blanket acceptance of all reports included in this book which covers society business from 2008 and 2009. The book includes the ballot information for the 2009 elections (Board of Govenors and Annual Business Meeting). Governors can ask to have items exempted from blanket approval. These exempted items will will be acted upon individually. We will also act individually on items exempted by the Executive Committee. Please remember to bring this booklet with you to the meeting. I will bring a few extra copies to Portland. Please contact me directly (email is best - [email protected]) with any questions you may have. Please notify me if you will not be able to attend the meeting so I can share your regrets with the Governors. I will leave for Portland (via Davis, CA)on 18 July 2008 so try to contact me before that date if possible. I will arrive in Portland late on the afternoon of 20 July 2008. The Annual Business Meeting will be held on Sunday 26 July 2009 from 1800-2000 h in Galleria North. -
Aborichthys Waikhomi, a New Species of Fish (Teleostei : Nemacheilidae) from Arunachal Pradesh, India
ISSN 0375-1511 Rec. zool. Surv. India: 112(part-l) : 49-55, 2012 ABORICHTHYS WAIKHOMI, A NEW SPECIES OF FISH (TELEOSTEI : NEMACHEILIDAE) FROM ARUNACHAL PRADESH, INDIA LAISHRAM KOSYGIN Estuarine Biology Regional Centre, Zoological Survey of India Hilltop, Gopalpur-on-Sea, Odisha 761 002, India Email: [email protected] INTRODUCTION MATERIALS AND METHODS The fishes of the genus Aborichthys Chaudhuri The specimens were preserved in 10% formalin. are smaliloaches generally found in torrential hill Measurements and counts followed Jayaram (1999). streams in the Darjeeling Himalayas, north eastern Measurements were made to the nearest 0.1 mm India and upper Myanmar. They are characterized on the left side of specimens whenever possible. in having elongated and compressed body; anus The type specimens are deposited in the Zoological situated far forwards; pelvic fins extend Survey of India at Estuarine Biology Regional considerably beyond the anal opening; dorsal fin Centre, Gopalpur-on-Sea and Arunachal Pradesh inserted slightly behind pelvic fins; oblique narrow Regional Centre, Itanagar. Abbreviations used are: stripes on body; rounded caudal fin, which is HL, Head length; EBRC/ZSI/F, Estuarine Biology usually marked with concentric black rings and a Regional Centre/Zoological Survey of India/Fish; Max, Maximum; Min, Minimum; n, number of black spot at the upper corner of caudal base specimens examined; SD, Standard deviation; SL, (Chaudhuri, 1913; Hora, 1925). While describing Standard length; V / APRC/ ZSI/ P, Aborichthys rossamai, Sen (2009) remarked that it is Vertebrate/ Arunachal Pradesh Regional Centre/ very much similar to genus Schistura McClelland Zoological Survey of India/Pisces. and except for the forward position of the anus other characters of the genus are lacking in it. -
Occasional Papers of the Museum of Zoology the University of Michigan
OCCASIONAL PAPERS OF THE MUSEUM OF ZOOLOGY THE UNIVERSITY OF MICHIGAN DISCHERODONTUS, A NEW GENUS OF CYPRINID FISHES FROM SOUTHEASTERN ASIA ABSTRACT.-Rainboth, WalterJohn. 1989. Discherodontus, a new genw of cyprinid firhes from southeastern Asia. Occ. Pap. Mzcs. 2001. Univ. Michigan, 718:I-31, figs. 1-6. Three species of southeast Asian barbins were found to have two rows of pharyngeal teeth, a character unique among barbins. These species also share several other characters which indicate their close relationship, and allow the taxonomic recognition of the genus. Members of this new genus, Discherodontzcs, are found in the Mekong, Chao Phrya, and Meklong basins of Thailand and the Pahang basin of the Malay peninsula. The new genus appears to be most closely related to Chagunizcs of Burma and India, and a group of at least six genera of the southeast Asia-Sunda Shelf basins. Key words: Discherodontus, fihes, Cyprinidae, taxonomy, natural history, Southemt Asia. INTRODUCTION Among the diverse array of barbins of southern and southeastern Asia, there are a number of generic-ranked groups which are poorly understood, or which still await taxonomic recognition. One group of three closely related species, included until now in two genera, is the subject of this paper. Prior to this study, two of the three species in this new genus have been relegated to Puntius of Hamilton (1822), but as understood by Weber and de Beaufort (1916), and by Smith (1945). The remaining species has been placed in Acrossocheilus not of *Department of Biology, University of California (UCLA), Los Angeles, CA 90024 2 Walter J.