An Efficient Heterologous Escherichia Coli-Based Expression System For
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Megacollybia (Agaricales)
Rep. Tottori Mycol. Inst. 45 : 1–57, 2007. Megacollybia (Agaricales) KAREN W. HUGHES1, RONALD H. PETERSEN1, JUAN LUIS MATA2, NADEZHDA V. PSURTSEVA3, ALEXANDER E. KOVALENKO3, OLGA V. MOROZOVA3, EDGAR B. LICKEY 4, JOAQUIN CIFUENTES BLANCO5, DAVID P. LEWIS6, EIJI NAGASAWA7, ROY E. HALLING8, SEIJI TAKEHASHI9, M. CATHERINE AIME10, TOLGOR BAU11, TERRY HENKEL12 Abstract The genus Megacollybia, originally proposed for M. (Collybia) platyphylla, has traditional- ly been treated as monotaxic. A phylogenetic reconstruction based on ITS rDNA sequences indicates that several species are involved, with strong phylogeographic signal. Although morphological characters are largely qualitative, examination of basidiomata suggests that specimens included in discrete clades can be distinguished at the species level. On these bases (phylogenetic, morphological), several new taxa are proposed: M. clitocyboidea, M. texensis, M. fusca, M. subfurfuracea, M. rodmani (with f. murina) and M. marginata. Tricholomopsis fallax is transferred to Megacollybia; M. platyphylla remains the type species of the genus but appears to be restricted to Europe, Scandinavia and western and central Russia. Key words: Taxonomy, systematics, biogeography, phylogeny, phylogeography 1 Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996-1100 USA. 2 Department of Biology, University of South Alabama, Mobile, AL 36688 USA 3 Komarov Botanical Institute, 2 Prof. Popov Street, St Petersburg, 197376 Russia 4 Department of Biology, Bridgewater College, Bridgewater, -
Since 2008, the Small Alaskan
View of the Girdwood ski area from the Alyeska Highway. Steve Trudell, Burke Museum Herbarium, University of Washington ince 2008, the small Alaskan ski Arm Mycological Society (TAMS). educational mushroom walks (including town of Girdwood, located 35 miles TAMS, whose motto appears in the title one for kids led by Girdwood’s local southeast of Anchorage on the of this article, came into being in January, 10-year-old MykoKid [and TAMS Snorth side of Turnagain Arm (the narrow 2017. Its founding co-Presidents are co-President], Gabriel Wingard) that west-east-trending body of water that Kate Mohatt and Gabriel Wingard and are so popular that most fill up as soon separates the northern Kenai Peninsula membership has quickly grown to over as online registration opens, a silent from the main mass of Alaska), has 60 people, not a huge number by Pacific auction to support local non-profit hosted an annual Fungus Fair. Having Northwest mushroom-club standards, organizations such as the Girdwood helped with eight of the ten, I thought it but a great start. Trails Committee, Health Clinic, Center was time to call attention to this fun little Although the Fungus Fair has for Visual Arts, and Skate Park, and an event held in a majestic northern setting. changed over time, regular activities evening social event, held this year at Plus, this year’s 10th Fair was special, not have included an increasingly tasteful the new Girdwood Brewing Company only because of the landmark anniversary, display of locally collected mushrooms (also the site of TAMS membership but also for being the first that involved displayed with classy name tags in beds meetings where weighty fungal matters the membership of the newly formed of vibrant green moss and conifer duff, are discussed over fine craft beers). -
Pipestem Foray Overview
Volume 49:1 January ⁄ February 2008 www.namyco.org Pipestem Foray Overview An East-Coaster’s Perspective A West-Coaster’s Perspective by Dave Wasilewski by Debbie Viess For about 25 years now I have As Steve Trudell rightly pointed out hunted and studied wild mush- to me, don’t gloat about your mush- rooms, but I’ve never been active in rooms until they are safely in your a club. The NAMA Orson K. Miller basket! The continuing “Curse of Memorial Foray held in Pipestem, NAMA” (some call it global warm- WV, this past August was the first ing) slipped in the back door, behind such event that I have ever at- the earlier and heartening West tended. Virginia thunderstorms. Extreme I must admit that, as I drove heat and lack of rain for the previ- south on Interstate 81 through two ous couple of weeks made condi- solid hours of Pennsylvania rainfall tions on the ground challenging for on an eight-hour trip to a place hopeful finders of fungi. Chlorosplenium aeruginascens, one of where little or no rain had fallen for Luckily, my Southern Belle the many delights found at Pipestem. over a week, for the purpose of hostess with the mostest, Coleman hunting wild mushrooms, I felt a bit McCleneghan, took me on a few names like Gyroporus and Pulvero- conflicted. My mind wandered pre-NAMA forays in Virginia, where boletus, tucked among the through conifer groves in the conditions were much improved. My many shades of forest green and Poconos where imaginary boletes very first walk ever along the brown. -
Mushroom Toxins & Poisonings in New Jersey
Mushroom Toxins & Poisonings in New Jersey & Nearby Eastern North America What this document doesn’t do: (1) This document is not intended to be used as a guide for treatment and should not be so used. (2) Mushrooms should not be selected for eating based on the content of this document. [In identifying mushrooms in poisoning cases, this document does not replace expertise that should be obtained by calling NJPIES and obtaining contact with an experienced mycologist.] (3) This document is not a replacement for a detailed toxicological review of the subject of mushroom poisoning. (4) This document is intended for use with a broad set of audiences; for this reasons, it should not be used uncritically in setting protocols [for example, carrying out a Meixner test would be inappropriate for a first responder who would appropriately focus on collecting a poi- soning victim, the relevant objects from the scene of the poisoning, and the critical timing characteristics of the event such as the delay between ingestion and onset of symptoms.] POISON CONTROL: New Jersey “Poison Control” is called NJPIES (New Jersey Poison Information & Education System). Telephone: 1-800-222-1222 [works in all states—(WARN- ING) WILL CONNECT TO A MOBILE PHONE’S HOME STATE—IF YOU’RE UNCERTAIN, USE A LAND- LINE] If the victim is unconscious, call “911.” Background of these notes: This document was originally compiled by Rod Tulloss and Dorothy Smullen for an NJ Mycol. Assoc. workshop, 25 March 2006. Version 2.0 was compiled by Tulloss. When viewed with Acrobat Reader, underlined red or gray words and phrases are “hot linked cross-references.” We have included a few notes on fungal poisons that are not from “mushrooms.” The notes were prepared by mycologists with experience in diagnosis of fungi involved in cases in which ingestion of toxic fungi was suspected. -
Effects of Land Use on the Diversity of Macrofungi in Kereita Forest Kikuyu Escarpment, Kenya
Current Research in Environmental & Applied Mycology (Journal of Fungal Biology) 8(2): 254–281 (2018) ISSN 2229-2225 www.creamjournal.org Article Doi 10.5943/cream/8/2/10 Copyright © Beijing Academy of Agriculture and Forestry Sciences Effects of Land Use on the Diversity of Macrofungi in Kereita Forest Kikuyu Escarpment, Kenya Njuguini SKM1, Nyawira MM1, Wachira PM 2, Okoth S2, Muchai SM3, Saado AH4 1 Botany Department, National Museums of Kenya, P.O. Box 40658-00100 2 School of Biological Studies, University of Nairobi, P.O. Box 30197-00100, Nairobi 3 Department of Clinical Studies, College of Agriculture & Veterinary Sciences, University of Nairobi. P.O. Box 30197- 00100 4 Department of Climate Change and Adaptation, Kenya Red Cross Society, P.O. Box 40712, Nairobi Njuguini SKM, Muchane MN, Wachira P, Okoth S, Muchane M, Saado H 2018 – Effects of Land Use on the Diversity of Macrofungi in Kereita Forest Kikuyu Escarpment, Kenya. Current Research in Environmental & Applied Mycology (Journal of Fungal Biology) 8(2), 254–281, Doi 10.5943/cream/8/2/10 Abstract Tropical forests are a haven of biodiversity hosting the richest macrofungi in the World. However, the rate of forest loss greatly exceeds the rate of species documentation and this increases the risk of losing macrofungi diversity to extinction. A field study was carried out in Kereita, Kikuyu Escarpment Forest, southern part of Aberdare range forest to determine effect of indigenous forest conversion to plantation forest on diversity of macrofungi. Macrofungi diversity was assessed in a 22 year old Pinus patula (Pine) plantation and a pristine indigenous forest during dry (short rains, December, 2014) and wet (long rains, May, 2015) seasons. -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella -
2 the Numbers Behind Mushroom Biodiversity
15 2 The Numbers Behind Mushroom Biodiversity Anabela Martins Polytechnic Institute of Bragança, School of Agriculture (IPB-ESA), Portugal 2.1 Origin and Diversity of Fungi Fungi are difficult to preserve and fossilize and due to the poor preservation of most fungal structures, it has been difficult to interpret the fossil record of fungi. Hyphae, the vegetative bodies of fungi, bear few distinctive morphological characteristicss, and organisms as diverse as cyanobacteria, eukaryotic algal groups, and oomycetes can easily be mistaken for them (Taylor & Taylor 1993). Fossils provide minimum ages for divergences and genetic lineages can be much older than even the oldest fossil representative found. According to Berbee and Taylor (2010), molecular clocks (conversion of molecular changes into geological time) calibrated by fossils are the only available tools to estimate timing of evolutionary events in fossil‐poor groups, such as fungi. The arbuscular mycorrhizal symbiotic fungi from the division Glomeromycota, gen- erally accepted as the phylogenetic sister clade to the Ascomycota and Basidiomycota, have left the most ancient fossils in the Rhynie Chert of Aberdeenshire in the north of Scotland (400 million years old). The Glomeromycota and several other fungi have been found associated with the preserved tissues of early vascular plants (Taylor et al. 2004a). Fossil spores from these shallow marine sediments from the Ordovician that closely resemble Glomeromycota spores and finely branched hyphae arbuscules within plant cells were clearly preserved in cells of stems of a 400 Ma primitive land plant, Aglaophyton, from Rhynie chert 455–460 Ma in age (Redecker et al. 2000; Remy et al. 1994) and from roots from the Triassic (250–199 Ma) (Berbee & Taylor 2010; Stubblefield et al. -
24475 Fungi PW1.Indd
Key features for the identifi cation Saprotrophic recycler fungi ...continued of the fungi in this guide Growth form. Fungi come in many different shapes and sizes. damaged. This comes in a range of colours and sometimes Tapinella atrotomentosa Velvet Rollrim. Cap max. In this fi eld guide most species are the classic toadstool shape changes from white to its fi nal colour. 20cm. This chunky species grows on rotten wood. It with a cap and stem but also included are some that grow out of Striations. These are radial lines that are sometimes visible Calocera viscosa Yellow Stagshorn. This bright yellow has a large mid brown, velvety cap with an inrolled wood like small shelves or brackets and others that have a coral- in the cap. Sometimes they are just at the cap margin and coral-like fungus (growing up to 10cm high) is usually margin and the stem is often short and set to one like shape. Take note of whether the fungus is growing alone, sometimes they extend to the centre of the cap. They refl ect trooping or in a cluster. seen growing from conifer stumps and logs. It is often side. The stem is also covered in dark brown dense the point where the top of the gills attach to the cap but, velvet. The gills are pale brown, decurrent and can Cap shape and texture. Fungal caps come in many shapes and be warned, they often disappear as the fungus dries out so still visible in the winter months and is capable of sizes, and can change as the fruit body matures. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
(Agaricales) in New Zealand, Including Tricholomopsis Scabra Sp. Nov
Phytotaxa 288 (1): 069–076 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2016 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.288.1.7 The fungal genus Tricholomopsis (Agaricales) in New Zealand, including Tricholomopsis scabra sp. nov. JERRY A. COOPER1* & DUCKCHUL PARK2 1 Landcare Research, PO Box 69040, Lincoln 7640, New Zealand 2 Landcare Research, Private Bag 92170, Auckland 1142, New Zealand *e-mail: [email protected] Abstract The status of the genus Tricholomopsis (Agaricales) in New Zealand is reviewed. T. rutilans is a species described from the northern hemisphere and recorded from plantations of exotic Pinus radiata in New Zealand. Historical collections identified as T. rutilans were subjected to morphological and phylogenetic analysis. The results show that most of these collections refer to T. ornaticeps, originally described from New Zealand native forests. The presence in New Zealand of T. rutilans was not confirmed. Collections of Tricholomopsis from native forests and bush also include a newly described species, T. scabra, which is characterised by a distinctly scabrous pileus. The new species is phylogenetically and morphologically distinct but related to T. ornaticeps. T. ornaticeps and T. scabra are currently known only from New Zealand and the former has extended its habitat to include exotic conifer plantations. Keywords: conifer plantations, Pinus radiata, Southern Hemisphere, Tricholomopsis rutilans, Agaricales Introduction Tricholomopsis Singer (1939: 56) is a genus of saprophytic agaricoid fungi with yellow lamellae, a fibrillose or squamulose dry pileus with red or yellow tones, and it is usually associated with decaying wood. -
MYCENA Newsth Submissions for the May Newsletter Are Due by April 20
Mycological Society of San Francisco APR 2019 VOL 70:08 MYCENA NEWSth Submissions for the May newsletter are due by April 20 TABLE OF CONTENTS April Speaker Enrique Sanchez 1 Ntl. Forest Fire Closure Greg Miller 11 Hospitality Eric Multhaup 2 Decriminalize Psilocybin Ryan Munevar 12 Bill and Louise Freedman J. R. Blair 3 Cultivation Quarters Ken Litchfield 13 Culinary Corner Morgan Evans 6 Mycena News Submissions 14 Mushroom Sightings Pascal Pelous 9 APRIL GENERAL MEETING: Tuesday, April 16th, 2018 7–10pm Buckley Room/ Randall Museum Dr. M. Catherine Aime: Rusts Never Sleep IN TERMS OF species numbers and ubiquity, and State University in 2001 and completed rust fungi are an incredibly successful lineage. her postdoctoral research at the University of Together, the more than 7000 described species Oxford in the United Kingdom. She worked form the largest known group of plant patho- for four years as a research molecular biologist gens, while also having incredibly complex life with the USDA-ARS, Systematic Botany and cycles. This talk will explore the biology of Mycology Lab in Beltsville, MD and then four these fascinating organisms and discuss the years at Louisiana State University, before contributions that molecular systematics have moving to Purdue University in West Lafay- made to our understanding of their evolution. ette, IN, as Professor of Mycology and Director Dr. M. Catherine Aime earned her doctorate of the Arthur Fungarium and Kriebel Herbar- in Biology from Virginia Polytechnic Institute ium. The Aime Lab at Purdue researches the 1 systematics, evolution, and genomics of early the Mycological Society of America and Man- diverging basidiomycetes and tropical fungi. -
Poisoning Associated with the Use of Mushrooms a Review of the Global
Food and Chemical Toxicology 128 (2019) 267–279 Contents lists available at ScienceDirect Food and Chemical Toxicology journal homepage: www.elsevier.com/locate/foodchemtox Review Poisoning associated with the use of mushrooms: A review of the global T pattern and main characteristics ∗ Sergey Govorushkoa,b, , Ramin Rezaeec,d,e,f, Josef Dumanovg, Aristidis Tsatsakish a Pacific Geographical Institute, 7 Radio St., Vladivostok, 690041, Russia b Far Eastern Federal University, 8 Sukhanova St, Vladivostok, 690950, Russia c Clinical Research Unit, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran d Neurogenic Inflammation Research Center, Mashhad University of Medical Sciences, Mashhad, Iran e Aristotle University of Thessaloniki, Department of Chemical Engineering, Environmental Engineering Laboratory, University Campus, Thessaloniki, 54124, Greece f HERACLES Research Center on the Exposome and Health, Center for Interdisciplinary Research and Innovation, Balkan Center, Bldg. B, 10th km Thessaloniki-Thermi Road, 57001, Greece g Mycological Institute USA EU, SubClinical Research Group, Sparta, NJ, 07871, United States h Laboratory of Toxicology, University of Crete, Voutes, Heraklion, Crete, 71003, Greece ARTICLE INFO ABSTRACT Keywords: Worldwide, special attention has been paid to wild mushrooms-induced poisoning. This review article provides a Mushroom consumption report on the global pattern and characteristics of mushroom poisoning and identifies the magnitude of mortality Globe induced by mushroom poisoning. In this work, reasons underlying mushrooms-induced poisoning, and con- Mortality tamination of edible mushrooms by heavy metals and radionuclides, are provided. Moreover, a perspective of Mushrooms factors affecting the clinical signs of such toxicities (e.g. consumed species, the amount of eaten mushroom, Poisoning season, geographical location, method of preparation, and individual response to toxins) as well as mushroom Toxins toxins and approaches suggested to protect humans against mushroom poisoning, are presented.