Ecography ECOG-02908 Luo, Y
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Ecography ECOG-02908 Luo, Y. and Li, S. 2017. Cave Stedocys spitting spiders illuminate the history of the Himalayas and southeast Asia. – Ecography doi: 10.1111/ecog.02908 Supplementary material Appendix 1 Fig. A4. (A) Phylogenetic tree reconstructed using maximum likelihood inference based on the concatenated mitochondria and nuclear gene data. Branch is truncated as indicated by slashes. Blue numbers at nodes indicate maximum likelihood bootstrap support values, and “-” at nodes indicate that the bootstrap values are lower than 50%. Black numbers near branches are in-group divergence time nodes. Branch lengths indicate the expected number of substitutions per site. (B) Divergence times based on fossil calibration under uncorrelated exponential relaxed clock. Nodes are available in Figure 1SA. 95% CI* is 95% highest posterior density. Ma is million years ago. Table A5. Samples used in this study: specimen label, haplotype, taxon name, sample collection locality with coordinates, and GenBank accession numbers. Specimen code Family Genus Species Country Locality Lat/long Altitude Haplotype CO1 28S ITS2 16S H3 18S X001 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap1 submitting submitting submitting submitting submitting submitting X002 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap4 submitting submitting submitting submitting submitting submitting X003 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap7 submitting submitting submitting submitting submitting submitting X004 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap4 submitting submitting submitting submitting submitting submitting X005 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap2 submitting submitting submitting submitting submitting submitting X006 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap8 submitting submitting submitting submitting submitting submitting X007 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap8 submitting submitting submitting submitting submitting submitting X008 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap4 submitting submitting submitting submitting submitting submitting X010 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap5 submitting submitting submitting submitting submitting submitting X011 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap2 submitting submitting submitting submitting submitting submitting X012 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap2 submitting submitting submitting submitting submitting submitting X013 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.309/110.264 164 hap3 submitting submitting submitting submitting submitting submitting X014 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.513/110.243 175 hap9 submitting submitting submitting submitting submitting submitting X015 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.513/110.243 175 hap9 submitting submitting submitting submitting submitting submitting X016 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.513/110.243 175 hap9 submitting submitting submitting submitting submitting submitting X017 Scytodidae Stedocys sp. 1 China Guilin, Guangxi 25.513/110.243 175 hap9 submitting submitting submitting submitting submitting submitting X018 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap13 submitting submitting submitting submitting submitting submitting X019 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap13 submitting submitting submitting submitting submitting submitting X020 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap14 submitting submitting submitting submitting submitting submitting X021 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap13 submitting submitting submitting submitting submitting submitting X022 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap14 submitting submitting submitting submitting submitting submitting X023 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap14 submitting submitting submitting submitting submitting submitting X027 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap14 submitting submitting submitting submitting submitting submitting X028 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap13 submitting submitting submitting submitting submitting submitting X029 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.297/109.405 85 hap13 submitting submitting submitting submitting submitting submitting X030 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.227/109.410 130 hap16 submitting submitting submitting submitting submitting submitting X031 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.227/109.410 130 hap16 submitting submitting submitting submitting submitting submitting X032 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.227/109.410 130 hap16 submitting submitting submitting submitting submitting submitting X033 Scytodidae Stedocys sp. 2 China Liuzhou, Guangxi 24.227/109.410 130 hap15 submitting submitting submitting submitting submitting submitting X034 Scytodidae Stedocys sp. 2 China Yizhou, Guangxi 24.489/108.570 205 hap12 submitting submitting submitting submitting submitting submitting X035 Scytodidae Stedocys sp. 2 China Laibin, Guangxi 23.727/109.091 89 hap12 submitting submitting submitting submitting submitting submitting X036 Scytodidae Stedocys sp. 2 China Laibin, Guangxi 23.727/109.091 89 hap12 submitting submitting submitting submitting submitting submitting X037 Scytodidae Stedocys sp. 2 China Laibin, Guangxi 23.727/109.091 89 hap11 submitting submitting submitting submitting submitting submitting X038 Scytodidae Stedocys sp. 2 China Laibin, Guangxi 23.727/109.091 89 hap12 submitting submitting submitting submitting submitting submitting X039 Scytodidae Stedocys sp. 3 China Laibin, Guangxi 23.955/109.662 114 hap20 submitting submitting submitting submitting submitting submitting X040 Scytodidae Stedocys sp. 3 China Laibin, Guangxi 23.727/109.091 89 hap19 submitting submitting submitting submitting submitting submitting X041 Scytodidae Stedocys sp. 3 China Laibin, Guangxi 23.955/109.662 114 hap18 submitting submitting submitting submitting submitting submitting X042 Scytodidae Stedocys sp. 4 China Guilin, Guangxi 24.762/105.867 153 hap10 submitting submitting submitting submitting submitting submitting Qianxinan, X043 Scytodidae Stedocys sp. 5 China Guizhou 25.433/105.612 1056 hap21 submitting submitting submitting submitting submitting submitting Qianxinan, X044 Scytodidae Stedocys sp. 5 China Guizhou 25.433/105.612 1056 hap21 submitting submitting submitting submitting submitting submitting Qianxinan, X045 Scytodidae Stedocys sp. 5 China Guizhou 25.433/105.612 1056 hap21 submitting submitting submitting submitting submitting submitting Qianxinan, X046 Scytodidae Stedocys sp. 5 China Guizhou 25.433/105.612 1056 hap21 submitting submitting submitting submitting submitting submitting X047 Scytodidae Stedocys sp. 6 China Wenshan, Yunnan 23.507/104.902 1301 hap23 submitting submitting submitting submitting submitting submitting X048 Scytodidae Stedocys sp. 7 Vietnam Na phong, Bac Kan 22.464/105.650 169 hap25 submitting submitting submitting submitting submitting submitting X049 Scytodidae Stedocys sp. 7 Vietnam 22.464/105.650 169 hap25 submitting submitting submitting submitting submitting submitting Tham Thiuh, Bac X050 Scytodidae Stedocys sp. 7 Vietnam Kan 22.401/105.632 146 hap26 submitting submitting submitting submitting submitting submitting Tham Thiuh, Bac X051 Scytodidae Stedocys sp. 7 Vietnam Kan 22.350/105.687 193 hap24 submitting submitting submitting submitting submitting submitting Ba Be National X052 Scytodidae Stedocys sp. 7 Vietnam Park, Bac Kan 22.380/105.613 225 hap29 submitting submitting submitting submitting submitting submitting X053 Scytodidae Stedocys sp. 7 Vietnam Na phong, Bac Kan 22.390/105.614 179 hap29 submitting submitting submitting submitting submitting submitting X054 Scytodidae Stedocys sp. 7 Vietnam Pac Chan, Bac Kan 22.380/105.613 225 hap29 submitting submitting submitting submitting submitting submitting Ba Be National X055 Scytodidae Stedocys sp. 7 Vietnam Park, Bac Kan 22.390/105.614 179 hap29 submitting submitting submitting submitting submitting submitting Ba Be National X056 Scytodidae Stedocys sp. 7 Vietnam Park, Bac Kan 22.390/105.614 179 hap29 submitting submitting submitting submitting submitting submitting Ba Be National X057 Scytodidae Stedocys sp. 7 Vietnam Park, Bac Kan 22.390/105.614 179 hap28 submitting submitting submitting submitting submitting submitting X058 Scytodidae Stedocys sp. 7 Vietnam Na phong, Bac Kan 22.390/105.614 179 hap27 submitting submitting submitting submitting submitting submitting X059 Scytodidae Stedocys sp. 10 China Hechi, Guangxi 22.715/107.837 99 hap30 submitting submitting submitting submitting submitting submitting X061 Scytodidae Stedocys sp. 10 China Hechi, Guangxi 22.715/107.837 99 hap30 submitting submitting submitting submitting submitting submitting X062 Scytodidae Stedocys sp. 8 China Daxin, Guangxi 22.965/107.470 256 hap39 submitting submitting submitting submitting submitting submitting Chong zuo, X063 Scytodidae Stedocys sp. 8 China Guangxi 22.965/107.470 256 hap39 submitting submitting submitting submitting submitting submitting Chong zuo, X064 Scytodidae Stedocys sp. 8 China