The Impacts of Polyploidy, Geographic and Ecological
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DPR Journal 2016 Corrected Final.Pmd
Bul. Dept. Pl. Res. No. 38 (A Scientific Publication) Government of Nepal Ministry of Forests and Soil Conservation Department of Plant Resources Thapathali, Kathmandu, Nepal 2016 ISSN 1995 - 8579 Bulletin of Department of Plant Resources No. 38 PLANT RESOURCES Government of Nepal Ministry of Forests and Soil Conservation Department of Plant Resources Thapathali, Kathmandu, Nepal 2016 Advisory Board Mr. Rajdev Prasad Yadav Ms. Sushma Upadhyaya Mr. Sanjeev Kumar Rai Managing Editor Sudhita Basukala Editorial Board Prof. Dr. Dharma Raj Dangol Dr. Nirmala Joshi Ms. Keshari Maiya Rajkarnikar Ms. Jyoti Joshi Bhatta Ms. Usha Tandukar Ms. Shiwani Khadgi Mr. Laxman Jha Ms. Ribita Tamrakar No. of Copies: 500 Cover Photo: Hypericum cordifolium and Bistorta milletioides (Dr. Keshab Raj Rajbhandari) Silene helleboriflora (Ganga Datt Bhatt), Potentilla makaluensis (Dr. Hiroshi Ikeda) Date of Publication: April 2016 © All rights reserved Department of Plant Resources (DPR) Thapathali, Kathmandu, Nepal Tel: 977-1-4251160, 4251161, 4268246 E-mail: [email protected] Citation: Name of the author, year of publication. Title of the paper, Bul. Dept. Pl. Res. N. 38, N. of pages, Department of Plant Resources, Kathmandu, Nepal. ISSN: 1995-8579 Published By: Mr. B.K. Khakurel Publicity and Documentation Section Dr. K.R. Bhattarai Department of Plant Resources (DPR), Kathmandu,Ms. N. Nepal. Joshi Dr. M.N. Subedi Reviewers: Dr. Anjana Singh Ms. Jyoti Joshi Bhatt Prof. Dr. Ram Prashad Chaudhary Mr. Baidhya Nath Mahato Dr. Keshab Raj Rajbhandari Ms. Rose Shrestha Dr. Bijaya Pant Dr. Krishna Kumar Shrestha Ms. Shushma Upadhyaya Dr. Bharat Babu Shrestha Dr. Mahesh Kumar Adhikari Dr. Sundar Man Shrestha Dr. -
Vol: Ii (1938) of “Flora of Assam”
Plant Archives Vol. 14 No. 1, 2014 pp. 87-96 ISSN 0972-5210 AN UPDATED ACCOUNT OF THE NAME CHANGES OF THE DICOTYLEDONOUS PLANT SPECIES INCLUDED IN THE VOL: I (1934- 36) & VOL: II (1938) OF “FLORA OF ASSAM” Rajib Lochan Borah Department of Botany, D.H.S.K. College, Dibrugarh - 786 001 (Assam), India. E-mail: [email protected] Abstract Changes in botanical names of flowering plants are an issue which comes up from time to time. While there are valid scientific reasons for such changes, it also creates some difficulties to the floristic workers in the preparation of a new flora. Further, all the important monumental floras of the world have most of the plants included in their old names, which are now regarded as synonyms. In north east India, “Flora of Assam” is an important flora as it includes result of pioneering floristic work on Angiosperms & Gymnosperms in the region. But, in the study of this flora, the same problems of name changes appear before the new researchers. Therefore, an attempt is made here to prepare an updated account of the new names against their old counterpts of the plants included in the first two volumes of the flora, on the basis of recent standard taxonomic literatures. In this, the unresolved & controversial names are not touched & only the confirmed ones are taken into account. In the process new names of 470 (four hundred & seventy) dicotyledonous plant species included in the concerned flora are found out. Key words : Name changes, Flora of Assam, Dicotyledonus plants, floristic works. -
Diversity and Distribution of Vascular Epiphytic Flora in Sub-Temperate Forests of Darjeeling Himalaya, India
Annual Research & Review in Biology 35(5): 63-81, 2020; Article no.ARRB.57913 ISSN: 2347-565X, NLM ID: 101632869 Diversity and Distribution of Vascular Epiphytic Flora in Sub-temperate Forests of Darjeeling Himalaya, India Preshina Rai1 and Saurav Moktan1* 1Department of Botany, University of Calcutta, 35, B.C. Road, Kolkata, 700 019, West Bengal, India. Authors’ contributions This work was carried out in collaboration between both authors. Author PR conducted field study, collected data and prepared initial draft including literature searches. Author SM provided taxonomic expertise with identification and data analysis. Both authors read and approved the final manuscript. Article Information DOI: 10.9734/ARRB/2020/v35i530226 Editor(s): (1) Dr. Rishee K. Kalaria, Navsari Agricultural University, India. Reviewers: (1) Sameh Cherif, University of Carthage, Tunisia. (2) Ricardo Moreno-González, University of Göttingen, Germany. (3) Nelson Túlio Lage Pena, Universidade Federal de Viçosa, Brazil. Complete Peer review History: http://www.sdiarticle4.com/review-history/57913 Received 06 April 2020 Accepted 11 June 2020 Original Research Article Published 22 June 2020 ABSTRACT Aims: This communication deals with the diversity and distribution including host species distribution of vascular epiphytes also reflecting its phenological observations. Study Design: Random field survey was carried out in the study site to identify and record the taxa. Host species was identified and vascular epiphytes were noted. Study Site and Duration: The study was conducted in the sub-temperate forests of Darjeeling Himalaya which is a part of the eastern Himalaya hotspot. The zone extends between 1200 to 1850 m amsl representing the amalgamation of both sub-tropical and temperate vegetation. -
Hybrid Genetic Algorithm and Lasso Test Approach for Inferring Well Supported Phylogenetic Trees Based on Subsets of Chloroplastic Core Genes
Hybrid Genetic Algorithm and Lasso Test Approach for Inferring Well Supported Phylogenetic Trees based on Subsets of Chloroplastic Core Genes Bassam AlKindy1;3, Christophe Guyeux1, Jean-François Couchot1, Michel Salomon1, Christian Parisod2, and Jacques M. Bahi1 1 FEMTO-ST Institute, UMR 6174 CNRS, DISC Computer Science Department, University of Franche-Comté, France 2 Lab. Evolutionary Botany, University of Neuchâtel, Switzerland 3 Department of Computer Science, University of Mustansiriyah, Baghdad, Iraq {bassam.al-kindy, christophe.guyeux, jean-francois.couchot, michel.salomon, jacques.bahi}@univ-fcomte.fr, [email protected] Abstract. The amount of completely sequenced chloroplast genomes increases rapidly every day, leading to the possibility to build large scale phylogenetic trees of plant species. Considering a subset of close plant species defined according to their chloroplasts, the phylogenetic tree that can be inferred by their core genes is not necessarily well supported, due to the possible occurrence of “problematic” genes (i.e., homoplasy, incomplete lineage sorting, horizontal gene transfers, etc.) which may blur phylogenetic signal. However, a trustworthy phylogenetic tree can still be obtained if the number of problematic genes is low, the problem being to determine the largest subset of core genes that produces the best supported tree. To discard problematic genes and due to the overwhelming number of possible combinations, we propose an hybrid approach that embeds both genetic algorithms and statistical tests. Given a set of organisms, the result is a pipeline of many stages for the production of well supported phylogenetic trees. The proposal has been applied to different cases of plant families, leading to encouraging results for these families. -
Combining Approaches for Predicting Genomic Evolution Bassam Alkindy
Combining approaches for predicting genomic evolution Bassam Alkindy To cite this version: Bassam Alkindy. Combining approaches for predicting genomic evolution. Bioinformatics [q-bio.QM]. Université de Franche-Comté, 2015. English. NNT : 2015BESA2012. tel-01428885 HAL Id: tel-01428885 https://tel.archives-ouvertes.fr/tel-01428885 Submitted on 6 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. ; /9=!9=7:"3:#3 é c o l e d o c t o r a l e s c i e n c e s p o u r l ’ i n g é n i e u r e t m i c r o t e c h n i q u e s % 0 2 $ < 1 & 2 ; 6 7 < * 1 + 0 8 ) < , 8 ' ( ; 6 Combining Approaches for Predicting Genomic Evolution Combinaison d’Approches pour Résoudre le Problème du Réarrangement de Génomes BASSAM BASIM JAMIL ALKINDY ; /9!97:"3:#3 é c o l e d o c t o r a l e s c i e n c e s p o u r l ’ i n g é n i e u r e t m i c r o t e c h n i q u e s % 0 2 $ < 1 & 2 ; 6 7 < * 1 + 0 8 ) < , 8 ' ( ; 6 N◦ X X X Combining Approaches for Predicting Genomic Evolution Combinaison d’Approches pour Résoudre le Problème du Réarrangement de Génomes A dissertation -
Thai Forest Bulletin
Thai Fores Thai Forest Bulletin t Bulletin (Botany) Vol. 46 No. 2, 2018 Vol. t Bulletin (Botany) (Botany) Vol. 46 No. 2, 2018 ISSN 0495-3843 (print) ISSN 2465-423X (electronic) Forest Herbarium Department of National Parks, Wildlife and Plant Conservation Chatuchak, Bangkok 10900 THAILAND http://www.dnp.go.th/botany ISSN 0495-3843 (print) ISSN 2465-423X (electronic) Fores t Herbarium Department of National Parks, Wildlife and Plant Conservation Bangkok, THAILAND THAI FOREST BULLETIN (BOTANY) Thai Forest Bulletin (Botany) Vol. 46 No. 2, 2018 Published by the Forest Herbarium (BKF) CONTENTS Department of National Parks, Wildlife and Plant Conservation Chatuchak, Bangkok 10900, Thailand Page Advisors Wipawan Kiaosanthie, Wanwipha Chaisongkram & Kamolhathai Wangwasit. Chamlong Phengklai & Kongkanda Chayamarit A new species of Scleria P.J.Bergius (Cyperaceae) from North-Eastern Thailand 113–122 Editors Willem J.J.O. de Wilde & Brigitta E.E. Duyfjes. Miscellaneous Cucurbit News V 123–128 Rachun Pooma & Tim Utteridge Hans-Joachim Esser. A new species of Brassaiopsis (Araliaceae) from Thailand, and lectotypifications of names for related taxa 129–133 Managing Editor Assistant Managing Editor Orporn Phueakkhlai, Somran Suddee, Trevor R. Hodkinson, Henrik Æ. Pedersen, Nannapat Pattharahirantricin Sawita Yooprasert Priwan Srisom & Sarawood Sungkaew. Dendrobium chrysocrepis (Orchidaceae), a new record for Thailand 134–137 Editorial Board Rachun Pooma (Forest Herbarium, Thailand), Tim Utteridge (Royal Botanic Gardens, Kew, UK), Jiratthi Satthaphorn, Peerapat Roongsattham, Pranom Chantaranothai & Charan David A. Simpson (Royal Botanic Gardens, Kew, UK), John A.N. Parnell (Trinity College Dublin, Leeratiwong. The genus Campylotropis (Leguminosae) in Thailand 138–150 Ireland), David J. Middleton (Singapore Botanic Gardens, Singapore), Peter C. -
A Dissertation Submitted for Partial Fulfillment Of
DIVERSITY OF NATURALIZED PLANT SPECIES ACROSS LAND USE TYPES IN MAKWANPUR DISTRICT, CENTRAL NEPAL A Dissertation Submitted for Partial Fulfillment of the Requirmentment for the Master‟s Degree in Botany, Institute of Science and Technology, Tribhuvan University, Kathmandu, Nepal Submitted by Bhawani Nyaupane Exam Roll No.:107/071 Batch: 2071/73 T.U Reg. No.: 5-2-49-10-2010 Ecology and Resource Management Unit Central Department of Botany Institute of Science and Technology Tribhuvan University Kirtipur, Kathamndu, Nepal May, 2019 RECOMMENDATION This is to certify that the dissertation work entitled “DIVERSITY OF NATURALIZED PLANT ACROSS LAND USE TYPES IN MAKWANPUR DISTRICT, CENTRAL NEPAL” has been submitted by Ms. Bhawani Nyaupane under my supervision. The entire work is accomplished on the basis of Candidate‘s original research work. As per my knowledge, the work has not been submitted to any other academic degree. It is hereby recommended for acceptance of this dissertation as a partial fulfillment of the requirement of Master‘s Degree in Botany at Institute of Science and Technology, Tribhuvan University. ………………………… Supervisor Dr. Bharat Babu Shrestha Associate Professor Central Department of Botany TU, Kathmandu, Nepal. Date: 17th May, 2019 ii LETTER OF APPROVAL The M.Sc. dissertation entitled “DIVERSITY OF NATURALIZED PLANT SPECIES ACROSS LAND USE TYPES IN MAKWANPUR DISTRICT, CENTRAL NEPAL” submitted at the Central Department of Botany, Tribhuvan University by Ms. Bhawani Nyaupane has been accepted as a partial fulfillment of the requirement of Master‘s Degree in Botany (Ecology and Resource Management Unit). EXAMINATION COMMITTEE ………………………. ……………………. External Examiner Internal Examiner Dr. Rashila Deshar Dr. Anjana Devkota Assistant Professor Associate Professor Central Department of Environmental Science Central Department of Botany TU, Kathmandu, Nepal. -
Andaman & Nicobar Islands, India
RESEARCH Vol. 21, Issue 68, 2020 RESEARCH ARTICLE ISSN 2319–5746 EISSN 2319–5754 Species Floristic Diversity and Analysis of South Andaman Islands (South Andaman District), Andaman & Nicobar Islands, India Mudavath Chennakesavulu Naik1, Lal Ji Singh1, Ganeshaiah KN2 1Botanical Survey of India, Andaman & Nicobar Regional Centre, Port Blair-744102, Andaman & Nicobar Islands, India 2Dept of Forestry and Environmental Sciences, School of Ecology and Conservation, G.K.V.K, UASB, Bangalore-560065, India Corresponding author: Botanical Survey of India, Andaman & Nicobar Regional Centre, Port Blair-744102, Andaman & Nicobar Islands, India Email: [email protected] Article History Received: 01 October 2020 Accepted: 17 November 2020 Published: November 2020 Citation Mudavath Chennakesavulu Naik, Lal Ji Singh, Ganeshaiah KN. Floristic Diversity and Analysis of South Andaman Islands (South Andaman District), Andaman & Nicobar Islands, India. Species, 2020, 21(68), 343-409 Publication License This work is licensed under a Creative Commons Attribution 4.0 International License. General Note Article is recommended to print as color digital version in recycled paper. ABSTRACT After 7 years of intensive explorations during 2013-2020 in South Andaman Islands, we recorded a total of 1376 wild and naturalized vascular plant taxa representing 1364 species belonging to 701 genera and 153 families, of which 95% of the taxa are based on primary collections. Of the 319 endemic species of Andaman and Nicobar Islands, 111 species are located in South Andaman Islands and 35 of them strict endemics to this region. 343 Page Key words: Vascular Plant Diversity, Floristic Analysis, Endemcity. © 2020 Discovery Publication. All Rights Reserved. www.discoveryjournals.org OPEN ACCESS RESEARCH ARTICLE 1. -
Insights from Sacred Lotus (Nelumbo Nucifera) and the Carrot Family (Apiaceae)
UNDERSTANDING ANGIOSPERM GENOME INTERACTIONS AND EVOLUTION: INSIGHTS FROM SACRED LOTUS (NELUMBO NUCIFERA) AND THE CARROT FAMILY (APIACEAE) BY RHIANNON PEERY DISSERTATION Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Plant Biology in the Graduate College of the University of Illinois at Urbana-Champaign, 2015 Urbana, Illinois Doctoral Committee: Professor Stephen R. Downie, Chair, Director of Research Professor Ken N. Paige Professor Sydney A. Cameron Assistant Professor Katy Heath ! ! ABSTRACT Horizontal and intracellular gene transfers are driving forces in plant evolution. The transfer of DNA into a genome adds genetic diversity and successfully incorporated genes can retain their original function or develop new functions through mutation. While there are trends and hypotheses for the frequency of transfers, age of transfers, and potential mechanisms of transfer each system has its own evolutionary history. The major goal of this study was to investigate gene transfer events and organelle rare genomic changes in two plant systems – Nelumbo (Nelumbonaceae) and the apioid superclade of Apiaceae subfamily Apioideae. Genome sequences from the early diverging angiosperm Nelumbo nucifera ‘China Antique’ were used to describe both intra- and interspecific patterns of variation and investigate intracellular gene transfers (IGT). A percent similarity approach was used to compare DNA from each genome and determine a possible mechanism of DNA transfer, if it occurred. The mechanisms investigated included recombination and double-strand break repair, as evidenced by repeat DNA and the presence of transposable elements. The ‘China Antique’ plastome retains the ancestral gene synteny of Amborella and has no evidence of IGT. ‘China Antique’ has more smaller repeats in its mitochondrial genomes than reported for other angiosperms, but does not contain any large repeats, and its nuclear genome does not have as much organelle DNA as the other angiosperms investigated, including Arabidopsis. -
Supplementary Materials:The Complete Chloroplast Genome
Molecules 2016, 21, 1029; doi:10.3390/molecules21081029 S1 of S1 Supplementary Materials: The Complete Chloroplast Genome Sequence of the Medicinal Plant Swertia mussoti Using the PacBio RS II Platform Beibei Xiang, Xiaoxue Li, Jun Qian, Lizhi Wang, Lin Ma, Xiaoxuan Tian and Yong Wang Table S1. The list of accession numbers of the chloroplast genome sequences used in this study. No. Taxon Family Order GenBank Accession Number 1 Swertia mussotii Gentianaceae Gentianales KU_641021 2 Gentiana straminea Gentianaceae Gentianales NC_027441 3 Gentiana crassicaulis Gentianaceae Gentianales NC_027442 4 Asclepias nivea Apocynaceae Gentianales NC_022431 5 Asclepias syriaca Apocynaceae Gentianales NC_022432 6 Catharanthus roseus Apocynaceae Gentianales NC_021423 7 Echites umbellatus Apocynaceae Gentianales NC_025655 8 Nerium oleander Apocynaceae Gentianales NC_025656 9 Oncinotis tenuiloba Apocynaceae Gentianales NC_025657 10 Pentalinon luteum Apocynaceae Gentianales NC_025658 11 Rhazya stricta Apocynaceae Gentianales NC_024292 12 Coffea arabica Rubiaceae Gentianales NC_008535 13 Gynochthodes officinalis Rubiaceae Gentianales NC_028009 14 Salvia miltiorrhiza Lamiaceae Lamiales NC_020431 15 Olea europaea Oleaceae Lamiales NC_013707 16 Jasminum nudiflorum Oleaceae Lamiales NC_008407 17 Boea hygrometrica Gesneriaceae Lamiales NC_016468 18 Sesamum indicum Pedaliaceae Lamiales NC_016433 19 Nicotiana tabacum Solanaceae Solanales NC_001879 20 Capsicum annuum Solanaceae Solanales NC_018552 21 Datura stramonium Solanaceae Solanales NC_018117 22 Solanum lycopersicum -
Applied Ethnobotany: Case-Studies from the Himalayan Region
PEOPLE AND PLANTS WORKING12 PAPER - SEPTEMBER 2003 This series of working papers is intended to provide information and to generate fruitful Applied discussion on key issues Ethnobotany: in the sustainable and equitable use case-studies from the of plant resources. Please send comments Himalayan region on this paper and suggestions Y. Aumeeruddy-Thomas & Pei Shengji for future issues to People and Plants Initiative International Plants Conservation Unit WWF-UK Panda House, Catteshall Lane Godalming Surrey GU7 1XR United Kingdom The designations employed and the presentation of material throughout this publication do not imply the expression of any opinion whatsoever on the part of WWF concerning the legal status of any country, territory, city, or area of its authorities, or concerning the delimitation of its frontiers or boundaries. The opinions expressed in this paper are entirely those of the authors and do not commit any Organization. Authors’ addresses: Yildiz Aumeeruddy-Thomas 81 rue du Fbg Boutonnet 34090 Montpellier FRANCE <[email protected]> Pei Shengji Department of Ethnobotany Kunming Institute of Botany, Chinese Academy of Sciences Heilongtan, Kunming Yunnan 650204 CHINA <[email protected]> Drawings on pages 22, 25, 30 and 31 reproduced with kind permission from “Concise flowers of the Himalaya” by Oleg Polunin and Adam Stainton. Oxford University Press India, 1990. Cover: Meconopsis paniculata, Yildiz Aumeeruddy-Thomas Published in 2003 by WWF Edited by Martin Walters Design: Ivette Fabbri Layout: Martina Höft © WWF 2003 Recommended citation: Aumeeruddy-Thomas, Y. and Pei Shengji. 2003. Applied Ethnobotany: case- studies from the Himalayan region. People and Plants working paper 12. WWF, Godalming, UK. -
Ethnobotany and Nutritional Values of Some Selected Wild Edible Plants Used by Rongmei Tribe of Manipur Northeast India
DOI: 10.21276/ijabpt.2016.7.4.1 Volume-7, Issue-4, Oct-Dec-2016 Coden IJABFP-CAS-USA Copyrights@2016 Received: 15th July 2016 Revised: 15th Aug 2016 Accepted: 18th Aug 2016 DOI: 10.21276/Ijabpt, http://dx.doi.org/10.21276/ijabpt Research article ETHNOBOTANY AND NUTRITIONAL VALUES OF SOME SELECTED WILD EDIBLE PLANTS USED BY RONGMEI TRIBE OF MANIPUR NORTHEAST INDIA Robert Panmei*, P.R. Gajurel and B.Singh Forest Systematic & Ethnobiology Laboratory, Department of Forestry, North Eastern Regional Institute of Sciences and Technology Nirjuli-791109 (Arunachal Pradesh) ABSTRACT: The paper deals with ethnobotanical uses and proximate nutritional analysis of some wild edible plants consumed by Rongmei tribe of Manipur, northeast India. Extensive field surveys were carried out in the selected study site during 2013-2015. Ethnobotanical data were collected from 50 respondentsusing semi structured questionnaires. The mostly preferred 5 species having both vegetable and ethnomedicinal values growing in the natural habitat were selected for nutritional analysis. Proximate nutritional values of the 5 species were evaluated in terms of crude protein, total carbohydrate, crude fibre, vitamin C and crude fats adopting standard methods. These species exhibit good content of crude protein, crude fibre and vitamin C with low fat contents indicating their nutritional potential. The outcome of the nutritional analysis suggested that the selected species has high nutritional content and were even superior to some domesticated varieties These species can be promoted for the large scale cultivation and marketing for the benefit of the local tribe and other communities. Key words: Northeast India, Rongmei tribe, ethnobotany, wild edible plants, nutritional value, *Corresponding author: Robert Panmei, Department of Forestry, North Eastern Regional Institute of Sciences and Technology Nirjuli-791109, India Email: [email protected] Mobile no.