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Table of Contents January 12-16, 2019 PLANT & ANIMAL GENOME XXVII Town & Country Hotel THE INTERNATIONAL CONFERENCE San Diego, CA ON THE STATUS OF PLANT & ANIMAL GENOME RESEARCH FINAL PROGRAM & EXHIBIT GUIDE Organizing Committee Chairman: Stephen R. Heller, NIST (USA) Ī PLANT COORGANIZERS Ī ABSTRACTS COORDINATORS Antonio Costa De Oliveira, Federal David Grant, USDA/ARS/CICGR, USA University of Pelotas, Brazil Gerard Lazo, USDA/ARS/WRRC, USA Carolyn J. Lawrence Dill, Iowa State Victoria Carollo Blake, Montana State University, USA University, USA Catherine Feuillet, Inari Agriculture, USA Perry Gustafson, University of Missouri, USA Ī DIGITAL TOOLS AND RESOURCES and University of Nottingham, UK COORDINATORS Fangpu Han, Chinese Academy of Sciences, Monica Munoz-Torres, CGRB, Oregon China State University, USA Brian Smith-White, NIH/NLM/NCBI, USA Jerome P. Miksche, Emeritus Director, USDA, Plant Genome Program, USA TRAVEL GRANTS COORDINATORS Graham Moore, John Innes Centre, UK Ī Tom Blake, Montana State University Rod A. Wing, University of Arizona, USA, (Retired), USA and International Rice Research Institute, Max Rothschild, Iowa State University, USA Philippines Alison L. Van Eenennaam, University of California Davis, USA Ī ANIMAL COORGANIZERS Greger Larson, University of Oxford, UK VISA LETTERS COORDINATOR Molly McCue, University of Minnesota, USA Ī Hans Cheng, USDA/ARS, USA Chris Tuggle, Iowa State University, USA CONFERENCE MANAGEMENT Sponsors and Supporters 184 S. Livingston Avenue Ī USDA, Agricultural Research Service Suite 9, #184 Ī USDA, National Agricultural Library Livingston, New Jersey 07039 USDA, National Institute of Food and Agriculture Ī USA Ī John Innes Centre Phone: (201) 653-5141 Email: [email protected] Cover artwork provided by Applied Biosystems. Originally developed for the company’s “Genetic Harvest” Agriculture Seminars, this image Website: www.intlpag.org represents the importance of molecular genetic approaches in plant and animal research. ATTENDEES OF PAG XXVII RECIEVE $100 DISCOUNT ON PAG ASIA 2019 PAG ASIA 2019 Futian Shangri-La, Shenzhen, China June 6-8, 2019 In response to an expanding global population, worldwide climate changes, and dramatic plant and animal genome research occurring in the Asia Pacific region, the organizers of the Plant and Animal Genome Conference (PAG) are planning a 3-day version of PAG to be held in Shenzhen, consisting of plenary talks, workshops, a poster section, and tabletop exhibits. Program Overview PAUL BOETTCHER TAKESHI IZAWA JANE LOVELAND NING YANG QIFA ZHANG YAOFENG ZHAO Plenary Speakers PROPOSED WORKSHOP TOPICS Advancing Cellulosic Biofuel Technology from PAUL BOETTCHER Genomic Studies Food and Agriculture Organization of the United Nations, Italy Aquatic Mammal Genome and Evolution “FAO’s Work on Applying Genomics In the Management of Animal Genetic Resources” Aquaculture and Genomics TAKESHI IZAWA Genomic and Genetic Analysis in Polyploid Species Professor, The University of Tokyo, Graduate School of Agricultural and Life Sciences, Japan Genomic Annotation Resources at the EBI “Photoperiodic Flowering in Rice Under Natural Conditions” Genomic Characterization of Small Ruminants in Asia High-Throughput Genetics: Lab to Landscape JANE LOVELAND Legume Genomics Annotation Project Leader, EMBL-EBI, UK Livestock Genomic Adaptation to Climate Change “From Human Genome Annotation to Wheat Genome Analyses” Modern SNP Technologies in Plants: Research and NING YANG Commercial Applications Professor, China Agricultural University, China Plant Omics “Genomic Analysis and Breeding of Chickens (Temporary Title)” Prioritizing SNPs and Variants from Next Generation Sequencing Data QIFA ZHANG Solanaceae Genomics and Molecular Genetics Professor, Huazhong Agricultural University, China Soybean Genomics “Rice Functional Genomics Leading to New Revolution: From Green Super Rice to Green Agriculture” Student Workshop Competition YAOFENG ZHAO Sweet Potato Genomics Professor, China Agricultural University, China Swine Genomics “Immunoglobulins in Domestic Animals: Surprises and Applications” Translational Genomics for Agriculture Wheat Genomics in Agriculture This list is subject to change. This list is subject to change. www.intlpagasia.org CONFERENCE VENUE Full Conference-Non-Profit Please see our website for information on * Those at University and Government the scientific program, abstract submissions, Futian Shangri-La, $675 organizations are eligible for this rate. registration, accommodations, and more. Shenzhen 4088 Yi Tian Road We are currently accepting applications Full Conference-Industry Futian District * for tabletop exhibtors. Various sponsorship Industry pricing is for those at companies $1,100 Shenzhen 518048, China and commercial organizations. and marketing opportunities are available. Contact us at [email protected] www.shangri-la.com/shenzhen/ Full Conference-Student futianshangrila/ * FIND US ON SOCIAL MEDIA: Must be Pre-Ph.D and upload a letter of $400 certification from their Dept. Chairperson. facebook.com/intlpag Visit www.intlpagasia.org twitter.com/PAGmeeting for discounted hotel rates for attendees. *Early registration pricing, shown above, ends April 12, 2019 184 S. LIVINGSTON AVE, STE 9, #184 LIVINGSTON, NJ 07039 • USA • TEL: +1 201-653-5141 www.intlpagasia.org • [email protected] Table of Contents Registration and Meeting Schedule 2 Plenary Talks Schedule 3 Digital Tools & Resources Schedule 4-6 Industry Workshops Schedule 7 Workshop List by Name 8-10 Scientific Program: Friday – Jan 11 11 Saturday – Jan 12 12-42 Sunday – Jan 13 43-70 Monday – Jan 14 71-87 Tuesday – Jan 15 88-108 Wednesday – Jan 16 109-118 Future Meeting Dates 119 Corporate Sponsors 120 Acknowledgements 121 Travel Grant Awards 122-124 Exhibitor List 125-128 Exhibit Hall Floorplan 129 Lower Level Poster Floorplan 130 Notes 131 Hotel Property Map 132 Mark Your Calendar For: PAG Asia 2019 – June 6-8, 2019 – Shenzhen, China PAG XXVIII – January 11-15, 2020 – San Diego, CA 1 Plant & Animal Genome XXVII Registration & Meeting Schedule Registration - ATLAS FOYER Friday January 11 12:00pm - 8:00pm Saturday January 12 7:00am - 8:00pm Sunday-Monday January 13-14 7:00am - 5:00pm Tuesday January 15 7:00am - 3:00pm Wednesday January 16 7:00am - 12:00pm Plenary Session - ATLAS BALLROOM Sunday January 13 6:15pm - 7:00pm Monday January 14 8:00am - 10:00am Tuesday-Wednesday January 15-16 8:00am - 9:30am Poster Access Hours - GRAND EXHIBIT HALL & LOWER LEVEL Saturday January 12 7:00am - 9:00pm Sunday January 13 7:00am - 9:00pm Monday January 14 7:00am - 9:00pm Tuesday January 15 7:00am - 3:00pm Wednesday January 16 7:00am - 12:00pm ALL POSTERS MUST BE REMOVED BY 12:00PM WEDNESDAY, JANUARY 16. Speaker Ready Room - TERRACE SALON 2 Friday January 11 12:00pm - 8:00pm Saturday - Sunday January 12-13 7:00am - 8:00pm Monday - Tuesday January 14-15 7:00am - 6:00pm Wednesday January 16 7:00am - 12:00pm Poster Sessions - GRAND EXHIBIT HALL & LOWER LEVEL Monday (Even Numbers) January 14 10:00am - 11:30am Monday (Odd Numbers) January 14 3:00pm - 4:30pm Exhibit Hours - GRAND EXHIBIT HALL Sunday January 13 (Reception: 7:15-8:45) 3:00pm - 8:45pm Monday January 14 9:30am - 5:00pm Tuesday January 15 9:30am - 3:00pm Computer Room - CALIFORNIA Friday January 11 12:00pm - 10:00pm Saturday - Tuesday January 12-15 6:00am - 10:00pm Wednesday January 16 6:00am - 3:00pm Digital Tools & Resources: Computer system demonstrations will be conducted Sunday - Wednesday in the "computer room", located in the California Room, see Digital Tools & Resources schedule for times. Welcome Reception - GRAND EXHIBIT HALL & LOWER LEVEL Sunday January 13 7:15pm - 8:45pm Closing Banquet Dinner - GRAND EXHIBIT HALL Wednesday January 16 7:00pm - 12:00am 2 Plenary Talks Schedule Sponsored by: Thermo Fisher Scientific Sunday, January 13, 2019 6:15 pm - 7:00 pm TOWN & COUNTRY BALLROOM Julie King, The University of Nottingham "Introducing New Genetic Variation into Wheat" Monday, January 14, 2019 8:00 am - 8:45 am TOWN & COUNTRY BALLROOM John Hickey, The Roslin Institute "Modern Plant and Animal Breeding Programs for Local and Global Economies" 8:45 am - 9:30 am TOWN & COUNTRY BALLROOM Barbara Valent, Kansas State University "Genome Dynamics of a Cereal Killer: Strategies for Controlling Ancient and Emerging Crop Diseases" Tuesday, January 15, 2019 8:45 am - 8:45 am TOWN & COUNTRY BALLROOM Paul Schulze-Lefert, Max Planck Institute for Plant Breeding Research "Establishment and Functions of the Microbiota for Plant Growth and Health" 8:00 am - 8:00 am TOWN & COUNTRY BALLROOM Elizabeth Winzeler, UCSD "Using Genetics and Genomics to Find Next-Generation Cures for Malaria" Wednesday, January 16, 2019 8:45 am - 9:30 am TOWN & COUNTRY BALLROOM Jonathan Pritchard, Stanford University "The Omnigenic Architecture of Human Complex Traits" 8:00 am - 8:45 am TOWN & COUNTRY BALLROOM Bin Han, National Center for Gene Research, Shanghai Institute of Plant Physiology and Ecology, CAS-Center of Excellence for Molecular Plant Sciences, Chinese Academy of Sciences "The Genomics of Rice Species Provides Insights into the Rice Complex3 Traits, Domestication and Heterosis" Digital Tools & Resources Schedule Saturday - January 12, 2019 1:30pm - 3:40pm Digital Tools and Resources Session 1 - CALIFORNIA Organizer: Brian Smith-White, National Center for Biotechnology Information (NCBI/NLM/NIH) 1:30pm Yuxuan Yuan, University of Western Australia "Bionano Data Analysis on the Command Line and Genome Assembly Quality Assessment using a GUI" (C01) 1:50pm Joelle Amselem,
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