(Trnf) Pseudogenes Defines a Distinctive Clade in Solanaceae Péter Poczai* and Jaakko Hyvönen
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Chemical Compounds, Pharmacological and Toxicological Activity of Brugmansia Suaveolens: a Review
plants Review Chemical Compounds, Pharmacological and Toxicological Activity of Brugmansia suaveolens: A Review Vera L. Petricevich 1 , David Osvaldo Salinas-Sánchez 2, Dante Avilés-Montes 3, Cesar Sotelo-Leyva 4 and Rodolfo Abarca-Vargas 1,* 1 Faculty of Medicine, Autonomous University of the State of Morelos (UAEM), Street: Leñeros, esquina Iztaccíhuatl s/n. Col. Volcanes, Cuernavaca 62350, Morelos, Mexico; [email protected] 2 Biodiversity and Conservation Research Center, Autonomous University of the State of Morelos (UAEM), Av. Universidad 1001, Col. Chamilpa, Cuernavaca 62209, Morelos, Mexico; [email protected] 3 Faculty of Biological Science, Autonomous University of the State of Morelos (UAEM), Av. Universidad 1001, Col. Chamilpa, Cuernavaca 62209, Morelos, Mexico; [email protected] 4 Faculty of Chemistry-Biological Sciences, Autonomous University of Guerrero Av. Lázaro Cárdenas s/n, South University City, Chilpancingo 39000, Guerrero, Mexico; [email protected] * Correspondence: [email protected]; Tel.: +52-777-361-2155 Received: 30 July 2020; Accepted: 3 September 2020; Published: 8 September 2020 Abstract: This study investigates updated information in different search engines on the distribution, phytochemistry, pharmacology, and toxicology of Brugmansia suaveolens (Solanaceae) using the extracts or chemical compounds at present. This plant has been used in traditional medicine in different cultures as a hallucinatory, analgesic, aphrodisiac, nematicide, sleep inducer, and muscle relaxant, as well as a treatment for rheumatism, asthma, and inflammation. The flowers, fruits, stems, and roots of the plant are used, and different chemical compounds have been identified, such as alkaloids, volatile compounds (mainly terpenes), coumarins, flavonoids, steroids, and hydrocarbons. The concentration of the different compounds varies according to the biotic and abiotic factors to which the plant is exposed. -
A Phylogenetic Framework for Evolutionary Study of the Nightshades
Särkinen et al. BMC Evolutionary Biology 2013, 13:214 http://www.biomedcentral.com/1471-2148/13/214 RESEARCH ARTICLE Open Access A phylogenetic framework for evolutionary study of the nightshades (Solanaceae): a dated 1000-tip tree Tiina Särkinen1,2*, Lynn Bohs3, Richard G Olmstead4 and Sandra Knapp1 Abstract Background: The Solanaceae is a plant family of great economic importance. Despite a wealth of phylogenetic work on individual clades and a deep knowledge of particular cultivated species such as tomato and potato, a robust evolutionary framework with a dated molecular phylogeny for the family is still lacking. Here we investigate molecular divergence times for Solanaceae using a densely-sampled species-level phylogeny. We also review the fossil record of the family to derive robust calibration points, and estimate a chronogram using an uncorrelated relaxed molecular clock. Results: Our densely-sampled phylogeny shows strong support for all previously identified clades of Solanaceae and strongly supported relationships between the major clades, particularly within Solanum. The Tomato clade is shown to be sister to section Petota, and the Regmandra clade is the first branching member of the Potato clade. The minimum age estimates for major splits within the family provided here correspond well with results from previous studies, indicating splits between tomato & potato around 8 Million years ago (Ma) with a 95% highest posterior density (HPD) 7–10 Ma, Solanum & Capsicum c. 19 Ma (95% HPD 17–21), and Solanum & Nicotiana c. 24 Ma (95% HPD 23–26). Conclusions: Our large time-calibrated phylogeny provides a significant step towards completing a fully sampled species-level phylogeny for Solanaceae, and provides age estimates for the whole family. -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
2006 - Biodiversity and Cultural Diversity in the Andes and Amazon 1: Biodiversity
Lyonia 9(1) 2006 - Biodiversity and Cultural Diversity in the Andes and Amazon 1: Biodiversity Volume 9 (1) February 2006 ISSN: 0888-9619 Introduction In 2001, the 1. Congress of Conservation of Biological and Cultural Diversity in the Andes and the Amazon Basin in Cusco, Peru, attempted to provide a platform to bridge the existing gap between Scientists, Non Governmental Organizations, Indigenous Populations and Governmental Agencies. This was followed by a 2. Congress in 2003, held in Loja, Ecuador together with the IV Ecuadorian Botanical Congress. The most important results of these conferences were published in Lyonia 6 (1/2) and 7 (1/2) 2004. Since then, the "Andes and Amazon" Biodiversity Congress has become a respected institution, and is being held every two years in Loja, Ecuador, where it has found a permanent home at the Universidad Tecnica Particular. In 2005, the 3. Congres on Biological and Cultural Diversity of the Andes and Amazon Basin joined efforts with the 2. Dry Forest Congress and the 5. Ecuadorian Botanical Congress, to provide an even broader venue. The Tropical Dry Forests of Latin America as well as the Andes and the Amazon Basin represent one of the most important Biodiversity-Hotspots on Earth. At the same time, both systems face imminent dangers due to unsustainable use. Attempts of sustainable management and conservation must integrate local communities and their traditional knowledge. Management decisions need to include the high importance of natural resources in providing building materials, food and medicines for rural as well as urbanized communities. The traditional use of forest resources, particularly of non-timber products like medicinal plants, has deep roots not only in indigenous communities, but is practiced in a wide section of society. -
Biodiversity: the UK Overseas Territories. Peterborough, Joint Nature Conservation Committee
Biodiversity: the UK Overseas Territories Compiled by S. Oldfield Edited by D. Procter and L.V. Fleming ISBN: 1 86107 502 2 © Copyright Joint Nature Conservation Committee 1999 Illustrations and layout by Barry Larking Cover design Tracey Weeks Printed by CLE Citation. Procter, D., & Fleming, L.V., eds. 1999. Biodiversity: the UK Overseas Territories. Peterborough, Joint Nature Conservation Committee. Disclaimer: reference to legislation and convention texts in this document are correct to the best of our knowledge but must not be taken to infer definitive legal obligation. Cover photographs Front cover: Top right: Southern rockhopper penguin Eudyptes chrysocome chrysocome (Richard White/JNCC). The world’s largest concentrations of southern rockhopper penguin are found on the Falkland Islands. Centre left: Down Rope, Pitcairn Island, South Pacific (Deborah Procter/JNCC). The introduced rat population of Pitcairn Island has successfully been eradicated in a programme funded by the UK Government. Centre right: Male Anegada rock iguana Cyclura pinguis (Glen Gerber/FFI). The Anegada rock iguana has been the subject of a successful breeding and re-introduction programme funded by FCO and FFI in collaboration with the National Parks Trust of the British Virgin Islands. Back cover: Black-browed albatross Diomedea melanophris (Richard White/JNCC). Of the global breeding population of black-browed albatross, 80 % is found on the Falkland Islands and 10% on South Georgia. Background image on front and back cover: Shoal of fish (Charles Sheppard/Warwick -
December 2012 Number 1
Calochortiana December 2012 Number 1 December 2012 Number 1 CONTENTS Proceedings of the Fifth South- western Rare and Endangered Plant Conference Calochortiana, a new publication of the Utah Native Plant Society . 3 The Fifth Southwestern Rare and En- dangered Plant Conference, Salt Lake City, Utah, March 2009 . 3 Abstracts of presentations and posters not submitted for the proceedings . 4 Southwestern cienegas: Rare habitats for endangered wetland plants. Robert Sivinski . 17 A new look at ranking plant rarity for conservation purposes, with an em- phasis on the flora of the American Southwest. John R. Spence . 25 The contribution of Cedar Breaks Na- tional Monument to the conservation of vascular plant diversity in Utah. Walter Fertig and Douglas N. Rey- nolds . 35 Studying the seed bank dynamics of rare plants. Susan Meyer . 46 East meets west: Rare desert Alliums in Arizona. John L. Anderson . 56 Calochortus nuttallii (Sego lily), Spatial patterns of endemic plant spe- state flower of Utah. By Kaye cies of the Colorado Plateau. Crystal Thorne. Krause . 63 Continued on page 2 Copyright 2012 Utah Native Plant Society. All Rights Reserved. Utah Native Plant Society Utah Native Plant Society, PO Box 520041, Salt Lake Copyright 2012 Utah Native Plant Society. All Rights City, Utah, 84152-0041. www.unps.org Reserved. Calochortiana is a publication of the Utah Native Plant Society, a 501(c)(3) not-for-profit organi- Editor: Walter Fertig ([email protected]), zation dedicated to conserving and promoting steward- Editorial Committee: Walter Fertig, Mindy Wheeler, ship of our native plants. Leila Shultz, and Susan Meyer CONTENTS, continued Biogeography of rare plants of the Ash Meadows National Wildlife Refuge, Nevada. -
Phylogeny of the Andean Genus Deprea (Physalideae, Solanaceae): Testing the Generic Circumscription
Phytotaxa 238 (1): 071–081 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.238.1.3 Phylogeny of the Andean genus Deprea (Physalideae, Solanaceae): testing the generic circumscription CAROLINA CARRIZO GARCÍA 1, GREG WAHLERT 2, CLARA INÉS OROZCO 3, GLORIA E. BARBOZA 1,4* & LYNN BOHS 2* 1 Instituto Multidisciplinario de Biología Vegetal (CONICET), Av. Velez Sarsfield 1611, Córdoba, Argentina 2 Department of Biology, University of Utah, 201 South Biology, Salt Lake City, USA 84112 3 Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Entrada Calle 53, Bogotá, Colombia; A. A.7495 4 Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Haya de la Torre s/n, Córdoba, Argentina * Corresponding authors: [email protected]; [email protected] Abstract Deprea (Solanaceae) is a small South American genus of 10 species occurring in Andean areas from Venezuela to Bolivia. The circumscription of Deprea has been repeatedly modified in recent years, with new species being described and others transferred into or out of the genus. The relationships of Deprea to other genera of Solanaceae are still poorly understood, although it seems to be closely related to Larnax. A phylogenetic analysis was performed to test the monophyly of Deprea. Sequences from three molecular markers (nuclear ITS and waxy and chloroplast psbA-trnH) were analyzed by parsimony and Bayesian methods. All the species of Deprea and Larnax sampled were intermixed in a strongly supported clade in the consensus trees, and therefore the currently recognized Deprea species do not form a monophyletic group. -
Florística E Diversidade Em Afloramentos Calcários Na Mata Atlântica
UNIVERSIDADE ESTADUAL PAULISTA “JÚLIO DE MESQUITA FILHO” unesp INSTITUTO DE BIOCIÊNCIAS – RIO CLARO PROGRAMA DE PÓS-GRADUAÇÃO EM CIÊNCIAS BIOLÓGICAS (BIOLOGIA VEGETAL) FLORÍSTICA E DIVERSIDADE EM AFLORAMENTOS CALCÁRIOS NA MATA ATLÂNTICA THARSO RODRIGUES PEIXOTO Dissertação apresentada ao Instituto de Biociências do Câmpus de Rio Claro, Universidade Estadual Paulista, como parte dos requisitos para obtenção do título de Mestre em Ciências Biológicas (Biologia Vegetal). Rio Claro, SP 2018 PROGRAMA DE PÓS-GRADUAÇÃO EM CIÊNCIAS BIOLÓGICAS (BIOLOGIA VEGETAL) FLORÍSTICA E DIVERSIDADE EM AFLORAMENTOS CALCÁRIOS NA MATA ATLÂNTICA THARSO RODRIGUES PEIXOTO ORIENTADOR: JULIO ANTONIO LOMBARDI Dissertação apresentada ao Instituto de Biociências do Câmpus de Rio Claro, Universidade Estadual Paulista, como parte dos requisitos para obtenção do título de Mestre em Ciências Biológicas (Biologia Vegetal). Rio Claro, SP 2018 581.5 Peixoto, Tharso Rodrigues P379f Florística e diversidade em afloramentos calcários na Mata Atlântica / Tharso Rodrigues Peixoto. - Rio Claro, 2018 131 f. : il., figs., gráfs., tabs., fots., mapas Dissertação (mestrado) - Universidade Estadual Paulista, Instituto de Biociências de Rio Claro Orientador: Julio Antonio Lombardi 1. Ecologia vegetal. 2. Plantas vasculares. 3. Carste. 4. Floresta ombrófila. 5. Filtro ambiental. I. Título. Ficha Catalográfica elaborada pela STATI - Biblioteca da UNESP Campus de Rio Claro/SP - Ana Paula S. C. de Medeiros / CRB 8/7336 Dedico esta dissertação aos meus pais e às minhas irmãs. AGRADECIMENTOS Agradeço acima de tudo aos meus pais, Aparecida e Sebastião, por estarem sempre ao meu lado. Pelo exemplo de vida, apoio constante, por terem me proporcionado uma ótima educação e força nas horas mais difíceis. Sem vocês dificilmente teria atingido meus objetivos. -
Species at Risk on Department of Defense Installations
Species at Risk on Department of Defense Installations Revised Report and Documentation Prepared for: Department of Defense U.S. Fish and Wildlife Service Submitted by: January 2004 Species at Risk on Department of Defense Installations: Revised Report and Documentation CONTENTS 1.0 Executive Summary..........................................................................................iii 2.0 Introduction – Project Description................................................................. 1 3.0 Methods ................................................................................................................ 3 3.1 NatureServe Data................................................................................................ 3 3.2 DOD Installations............................................................................................... 5 3.3 Species at Risk .................................................................................................... 6 4.0 Results................................................................................................................... 8 4.1 Nationwide Assessment of Species at Risk on DOD Installations..................... 8 4.2 Assessment of Species at Risk by Military Service.......................................... 13 4.3 Assessment of Species at Risk on Installations ................................................ 15 5.0 Conclusion and Management Recommendations.................................... 22 6.0 Future Directions............................................................................................. -
2320-5407 Int. J. Adv. Res. 6(10), 1123-1133
ISSN: 2320-5407 Int. J. Adv. Res. 6(10), 1123-1133 Journal Homepage: -www.journalijar.com Article DOI:10.21474/IJAR01/7916 DOI URL: http://dx.doi.org/10.21474/IJAR01/7916 RESEARCH ARTICLE MOLECULAR SYSTEMATIC STUDY OF TWO SOLANACEOUS GENERA DATURA L. AND BRUGMANSIA PERS. BASED ON ITS SEQUENCES OF NRDNA. Dhanya C.1, Shabir A. Rather2 and Devipriya V3. 1. Research & PG Department of Botany, SN College, Kollam, Kerala, South India, 2. Department of Botany, Delhi University, New Delhi, India, 3. Department of Botany, SN College, Chempazhanthy, Kerala, South India. …………………………………………………………………………………………………….... Manuscript Info Abstract ……………………. ……………………………………………………………… Manuscript History Phylogenetic analysis was performed based on ITS 1 and 2 sequences to Received: 13 August 2018 determine monophyly of Datura and Brugmansia and to understand Final Accepted: 15 September 2018 their relationships. The results support the splitting of Datura and Published: October 2018 Brugmansia into two distinct genera (BS 100 & 91). D. ceratocaula earlier considered as the connecting link between the two genera, is nested within the Datura clade (BS 57) as a distinct species. Although the three conventional sections of Datura viz. Dutra, Ceratocaulis & Datura (Stramonium) stand well supported (BS 100, 100 & 83), D. kymatocarpa, D. leichhardtii and D. pruinosa appear shifted from Section Dutra to Section Datura, corroborating earlier observations. D. discolor remains nested within the Section Dutra, refuting earlier suggestions as intermediary or ancestral role. But the divergence of D. discolor from the remaining taxa within the section Dutra as a clearly supported subclade (BS 100) may be suggestive of the subdivision of Section Dutra into two subsections. This subdivision of section Dutra however remains to be appraised using cladistical studies incorporating both molecular and morphological data. -
University of California, San Diego
UNIVERSITY OF CALIFORNIA, SAN DIEGO Evolutionary Genetics of Self-incompatibility in Solanaceae and Papaveraceae A dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Biology by Timothy Paape Committee in charge: Professor Joshua R. Kohn, Chair Professor Ronald S. Burton Professor Lin Chao Professor Stephen G. Weller Professor Christopher Wills 2009 Copyright Timothy Paape, 2009 All rights reserved. ii The dissertation of Timothy Paape is approved, and it is acceptable in quality and form for publication on microfilm and electronically: Chair University of California, San Diego iii Table of Contents Signature Page............................................................................................................. iii Table of Contents ........................................................................................................ iv List of Tables .............................................................................................................. vi List of Figures ............................................................................................................. viii Acknowledgements ..................................................................................................... x Vita and Publications................................................................................................... xi Abstract of the Dissertation ......................................................................................... xiii Chapter I .................................................................................................................... -
Botanist Interior 43.1
2011 THE MICHIGAN BOTANIST 1 EDWARD G. VOSS (1929 –2012) Anton A. Reznicek and Richard K. Rabeler University of Michigan Herbarium 3600 Varsity Drive Ann Arbor, MI 48108-2228 Edward Groesbec k Voss (Fig. 1), Professor and Curator Emeritus at the Uni - versity of Michigan Department of Ecology and Evolutionary Biology and Uni - versity of Michigan Herbarium, died on February 13, 2012 at his home in Ann Arbor, after a brief illness. He was born on February 22, 1929 in Delaware, Ohio. Ed’s abilities were clear early in his life. He attended Woodward High School in Toledo, Ohio. He received the Achievement Award as the outstanding senior in his 1946 high school class, and was later elected to the Woodward High Hall of Fame. He then graduated with a bachelor’s degree with honors from Denison University (1950); his undergraduate honors thesis, On the classifica - tion of the Hesperiidae , became a significant paper on Lepidoptera (Voss 1952). He completed his education with a master’s in Biology (1951) and a doctoral de - gree in Botany (1954), both from the University of Michigan working with Rogers McVaugh. He was awarded an honorary Doctor of Science from Denison University in 2003. In 1956, he began his long association with the University of Michigan and Michigan’s flora when he was appointed as a research associate at the Herbar - ium, beginning what was expected to be a five-year project to document the flora of Michigan. He joined the Botany faculty in 1960 as assistant professor and was promoted to associate professor (1963), and later, professor (1969).