Scyphozoa: Coronatae) Support the Concept of Perennation by Tissue Saving and Con- Firm Dormancy
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Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans
biology Review Cnidarian Immunity and the Repertoire of Defense Mechanisms in Anthozoans Maria Giovanna Parisi 1,* , Daniela Parrinello 1, Loredana Stabili 2 and Matteo Cammarata 1,* 1 Department of Earth and Marine Sciences, University of Palermo, 90128 Palermo, Italy; [email protected] 2 Department of Biological and Environmental Sciences and Technologies, University of Salento, 73100 Lecce, Italy; [email protected] * Correspondence: [email protected] (M.G.P.); [email protected] (M.C.) Received: 10 August 2020; Accepted: 4 September 2020; Published: 11 September 2020 Abstract: Anthozoa is the most specious class of the phylum Cnidaria that is phylogenetically basal within the Metazoa. It is an interesting group for studying the evolution of mutualisms and immunity, for despite their morphological simplicity, Anthozoans are unexpectedly immunologically complex, with large genomes and gene families similar to those of the Bilateria. Evidence indicates that the Anthozoan innate immune system is not only involved in the disruption of harmful microorganisms, but is also crucial in structuring tissue-associated microbial communities that are essential components of the cnidarian holobiont and useful to the animal’s health for several functions including metabolism, immune defense, development, and behavior. Here, we report on the current state of the art of Anthozoan immunity. Like other invertebrates, Anthozoans possess immune mechanisms based on self/non-self-recognition. Although lacking adaptive immunity, they use a diverse repertoire of immune receptor signaling pathways (PRRs) to recognize a broad array of conserved microorganism-associated molecular patterns (MAMP). The intracellular signaling cascades lead to gene transcription up to endpoints of release of molecules that kill the pathogens, defend the self by maintaining homeostasis, and modulate the wound repair process. -
Final Report
Developing Molecular Methods to Identify and Quantify Ballast Water Organisms: A Test Case with Cnidarians SERDP Project # CP-1251 Performing Organization: Brian R. Kreiser Department of Biological Sciences 118 College Drive #5018 University of Southern Mississippi Hattiesburg, MS 39406 601-266-6556 [email protected] Date: 4/15/04 Revision #: ?? Table of Contents Table of Contents i List of Acronyms ii List of Figures iv List of Tables vi Acknowledgements 1 Executive Summary 2 Background 2 Methods 2 Results 3 Conclusions 5 Transition Plan 5 Recommendations 6 Objective 7 Background 8 The Problem and Approach 8 Why cnidarians? 9 Indicators of ballast water exchange 9 Materials and Methods 11 Phase I. Specimens 11 DNA Isolation 11 Marker Identification 11 Taxa identifications 13 Phase II. Detection ability 13 Detection limits 14 Testing mixed samples 14 Phase III. 14 Results and Accomplishments 16 Phase I. Specimens 16 DNA Isolation 16 Marker Identification 16 Taxa identifications 17 i RFLPs of 16S rRNA 17 Phase II. Detection ability 18 Detection limits 19 Testing mixed samples 19 Phase III. DNA extractions 19 PCR results 20 Conclusions 21 Summary, utility and follow-on efforts 21 Economic feasibility 22 Transition plan 23 Recommendations 23 Literature Cited 24 Appendices A - Supporting Data 27 B - List of Technical Publications 50 ii List of Acronyms DGGE - denaturing gradient gel electrophoresis DMSO - dimethyl sulfoxide DNA - deoxyribonucleic acid ITS - internal transcribed spacer mtDNA - mitochondrial DNA PCR - polymerase chain reaction rRNA - ribosomal RNA - ribonucleic acid RFLPs - restriction fragment length polymorphisms SSCP - single strand conformation polymorphisms iii List of Figures Figure 1. Figure 1. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
New Record of Nausithoe Werneri (Scyphozoa, Coronatae
ZooKeys 984: 1–21 (2020) A peer-reviewed open-access journal doi: 10.3897/zookeys.984.56380 RESEARCH ARTICLE https://zookeys.pensoft.net Launched to accelerate biodiversity research New record of Nausithoe werneri (Scyphozoa, Coronatae, Nausithoidae) from the Brazilian coast and a new synonymy for Nausithoe maculata Clarissa Garbi Molinari1, Maximiliano Manuel Maronna1, André Carrara Morandini1,2 1 Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, travessa 14, n. 101, Cidade Universitária, São Paulo, SP, 05508-090, Brazil 2 Centro de Biologia Marinha, Universidade de São Paulo, Rodovia Manuel Hypólito do Rego km 131.5, São Sebastião, SP, 11600-000, Brazil Corresponding author: Clarissa G. Molinari ([email protected]) Academic editor: B.W. Hoeksema | Received 10 July 2020 | Accepted 20 September 2020 | Published 4 November 2020 http://zoobank.org/22EB0B21-7A27-43FB-B902-58061BA59B73 Citation: Molinari CG, Maronna MM, Morandini AC (2020) New record of Nausithoe werneri (Scyphozoa, Coronatae, Nausithoidae) from the Brazilian coast and a new synonymy for Nausithoe maculata. ZooKeys 984: 1–21. https://doi.org/10.3897/zookeys.984.56380 Abstract The order Coronatae (Scyphozoa) includes six families, of which Nausithoidae Haeckel, 1880 is the most diverse with 26 species. Along the Brazilian coast, three species of the genus Nausithoe Kölliker, 1853 have been recorded: Nausithoe atlantica Broch, 1914, Nausithoe punctata Kölliker, 1853, and Nausithoe aurea Silveira & Morandini, 1997. Living polyps (n = 9) of an unidentified nausithoid were collected in September 2002 off Arraial do Cabo (Rio de Janeiro, southeastern Brazil) at a depth of 227 m, and have been kept in culture since then. -
Impact of Invasive Tubastraea Spp. (Cnidaria: Anthozoa)
Aquatic Invasions (2020) Volume 15, Issue 1: 98–113 Special Issue: Proceedings of the 10th International Conference on Marine Bioinvasions Guest editors: Amy Fowler, April Blakeslee, Carolyn Tepolt, Alejandro Bortolus, Evangelina Schwindt and Joana Dias CORRECTED PROOF Research Article Impact of invasive Tubastraea spp. (Cnidaria: Anthozoa) on the growth of the space dominating tropical rocky-shore zoantharian Palythoa caribaeorum (Duchassaing and Michelotti, 1860) Isabella F. Guilhem1, Bruno P. Masi1,2 and Joel C. Creed1,2,* 1Laboratório de Ecologia Marinha Bêntica, Department of Ecology, Instituto de Biologia Roberto Alcântara Gomes, Universidade do Estado do Rio de Janeiro, Rua São Francisco Xavier 524, PHLC Sala 220, Rio De Janeiro, RJ CEP 20550-900, Brazil 2Sun Coral Research, Technological Development and Innovation Network, Instituto Brasileiro de Biodiversidade - BrBio, CEP 20031-203, Centro, Rio de Janeiro, RJ, Brazil *Corresponding author E-mail: [email protected] Co-Editors’ Note: This study was first presented at the 10th International Conference Abstract on Marine Bioinvasions held in Puerto Madryn, Argentina, October 16–18, 2018 Competition for space directly affects the structure of the sessile benthic communities (http://www.marinebioinvasions.info). Since on hard substrates. On the Brazilian coast Palythoa caribaeorum is an abundant their inception in 1999, the ICMB meetings shallow water mat-forming zoantharian and has fast growth rates. The objective of have provided a venue for the exchange of the present study was to assess the zoantharian’s biotic resistance by investigating information on various aspects of biological invasions in marine ecosystems, including changes in growth rates when interacting with the invasive sun corals Tubastraea ecological research, education, management tagusensis and T. -
Variability and Plasticity of the Nutrition of Zooxanthellate Jellyfishes : Insights from Experimental and Field Studies Nicolas Djeghri
Variability and plasticity of the nutrition of zooxanthellate jellyfishes : insights from experimental and field studies Nicolas Djeghri To cite this version: Nicolas Djeghri. Variability and plasticity of the nutrition of zooxanthellate jellyfishes : insights from experimental and field studies. Ecosystems. Université de Bretagne occidentale - Brest, 2019. English. NNT : 2019BRES0061. tel-02524884 HAL Id: tel-02524884 https://tel.archives-ouvertes.fr/tel-02524884 Submitted on 30 Mar 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THESE DE DOCTORAT DE L'UNIVERSITE DE BRETAGNE OCCIDENTALE COMUE UNIVERSITE BRETAGNE LOIRE ECOLE DOCTORALE N° 598 Sciences de la Mer et du littoral Spécialité : Ecologie Marine Par Nicolas DJEGHRI Variability and Plasticity of the Nutrition of Zooxanthellate Jellyfishes Insights from experimental and field studies. Variabilité et Plasticité de la Nutrition des Méduses à Zooxanthelles Apports expérimentaux et de terrain. Thèse présentée et soutenue à Plouzané, le 2 décembre 2019 Unité de recherche : Lemar Rapporteurs -
Jellyfish Impact on Aquatic Ecosystems
Jellyfish impact on aquatic ecosystems: warning for the development of mass occurrences early detection tools Tomás Ferreira Costa Rodrigues Mestrado em Biologia e Gestão da Qualidade da Água Departamento de Biologia 2019 Orientador Prof. Dr. Agostinho Antunes, Faculdade de Ciências da Universidade do Porto Coorientador Dr. Daniela Almeida, CIIMAR, Universidade do Porto Todas as correções determinadas pelo júri, e só essas, foram efetuadas. O Presidente do Júri, Porto, ______/______/_________ FCUP i Jellyfish impact on aquatic ecosystems: warning for the development of mass occurrences early detection tools À minha avó que me ensinou que para alcançar algo é necessário muito trabalho e sacrifício. FCUP ii Jellyfish impact on aquatic ecosystems: warning for the development of mass occurrences early detection tools Acknowledgments Firstly, I would like to thank my supervisor, Professor Agostinho Antunes, for accepting me into his group and for his support and advice during this journey. My most sincere thanks to my co-supervisor, Dr. Daniela Almeida, for teaching, helping and guiding me in all the steps, for proposing me all the challenges and for making me realize that work pays off. This project was funded in part by the Strategic Funding UID/Multi/04423/2019 through National Funds provided by Fundação para a Ciência e a Tecnologia (FCT)/MCTES and the ERDF in the framework of the program PT2020, by the European Structural and Investment Funds (ESIF) through the Competitiveness and Internationalization Operational Program–COMPETE 2020 and by National Funds through the FCT under the project PTDC/MAR-BIO/0440/2014 “Towards an integrated approach to enhance predictive accuracy of jellyfish impact on coastal marine ecosystems”. -
Mediterranean Deep-Sea Ecosystems: Biodiversity, Functioning and Vulnerability”
MEDITERRANEAN DEEP -SEA ECOSYSTEMS : BIODIVERSITY , FUNCTIONING AND VULNERABILITY ECOSISTÈMES PROFUNDS DE LA MEDITERRÀNIA : BIODIVERSITAT , FUNCIONAMENT I VULNERABILITAT Samuele Tecchio Memòria presentada per a optar al grau de Doctor per la Universitat de Barcelona Programa de Doctorat en Biodiversitat Directors: Dr. Francisco Sardà Amills Dra. Eva Zoe Ramírez Llodra Dept. de Recursos Marins Renovables Dept. de Recursos Marins Renovables Institut de Ciències del Mar (CSIC) Institut de Ciències del Mar (CSIC) Tutor: Dra. Creu Palacín Cabañas Dept. de Biologia Animal 2012 “Mediterranean deep-sea ecosystems: biodiversity, functioning and vulnerability” The author has been financed by a JAE pre-doctoral grant from the Spanish Research Council (CSIC), from December 2008 to November 2012. This work has been carried out in the framework of the following research projects: - BIOFUN (CTM2007-28739-E), from the European Science Foundation (ESF); - PROMETEO (CTM2007-66316-C02/MAR), from the CYCIT, Spain; - HERMIONE (G.A. 226354), from the European Union. Preface: three paths In offering this book to the public the writer uses no sophistry as an excuse for its existence. The hypocritical cant of reformed (?) gamblers, or whining, mealymouthed pretensions of piety, are not foisted as a justification for imparting the knowledge it contains. […] It may caution the unwary who are innocent of guile, and it may inspire the crafty by enlightenment on artifice. […] But it will not make the innocent vicious, or transform the pastime player into a professional; or make the fool wise, or surtail thae annual crop of suckers, but whatever the result may be, if it sells it will accomplish the primary motive of its author, as he needs the money. -
Recent Changes in Scleractinian Coral Nomenclature and Classification
Recent changes in Scleractinian coral nomenclature and classification. (A practical guide for coral and reef ecologists) Michel Pichon Adjunct Professor, James Cook University Australia Honorary Associate, Museum of Tropical Queensland, Townsville The following document provides information on changes which were introduced recently in the classification and nomenclature of scleractinian corals. Such changes stem to a large extent from the research activity and the syntheses carried out by the members of the international “Scleractinian Systematics Working Group” (SSWG) over the last few years. They are the result of a multi-pronged approach combining the information provided by the implementation of relatively new techniques, which have only recently been applied to scleractinian coral taxonomy. Such new tools include, inter alia, morphometrics, microstructural analyses, anatomy of soft parts and molecular genetics. The changes thus made to the nomenclature and classification of scleractinian corals underlie a move towards a classification reflecting more and more the phylogeny of various taxa, and as a result may place side by side morphologically very dissimilar species. Furthermore, such a move will require a re-definition of numerous genera (and of some families, which from a practical viewpoint is less critical) in accordance with the rules set out in the International Code of Zoological Nomenclature. Such a work is still to be done and a number of genera remain to this day without an adequate revised diagnostic morphological characterization. Several important studies are still in progress and one may expect additional changes in the near future. The present document, therefore, does not pretend to represent a complete revision of scleractinian coral taxonomy. -
Cnidaria: Scyphozoa: Coronatae: Nausithoidae) from the North Atlantic
Zootaxa 3320: 61–68 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) Discovery and redescription of type material of Nausithoe simplex (Kirkpatrick, 1890), comb. nov. (Cnidaria: Scyphozoa: Coronatae: Nausithoidae) from the North Atlantic ANDRÉ C. MORANDINI1 & GERHARD JARMS2 1Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, trav. 14, n. 101, São Paulo, SP, 05508-090, Brazil 2Biozentrum Grindel und Zoologisches Museum, Universität Hamburg, Martin-Luther-King-Platz 3, 20146 Hamburg, Germany E-mails: [email protected]; [email protected]; [email protected] Abstract With discovery and examination of type specimens in the Natural History Museum, London, UK, we reassign Stephanoscyph- istoma simplex (Kirkpatrick, 1890) to the genus Nausithoe Kölliker, 1853, as Nausithoe simplex, comb. nov., and designate a lectotype for the species. Use of morphometric measurements is considered important in coronate systematics, but key features also include the unique whorl of internal cusps and the shape of these cusps. All previous records of N. simplex must be re-eval- uated, taking into consideration the morphology of these internal cusps. Key words: Stephanoscyphus, Nausithoe, polyp, systematics, taxonomy, Stephanoscyphistoma Introduction The order Coronatae Vanhöffen, 1892 is considered the basal group of the class Scyphozoa Goette, 1887 based on both older (Thiel 1966; Uchida 1969; Werner 1973) and more recent studies (Marques & Collins 2004; Collins et al. 2006; Bayha et al. 2010). About 60 species are currently known in the group (Morandini & Jarms in prep.). Sev- eral authors (Werner 1973; Jarms 1990; Silveira & Morandini 1997) have stated that life cycle studies are essential in resolving systematics of the order, especially in metagenetic species. -
FIELD GUIDE to the JELLYFISH of WESTERN PACIFIC
EDITORS AUTHORS Aileen Tan Shau Hwai B. A. Venmathi Maran Sim Yee Kwang Charatsee Aungtonya Hiroshi Miyake Chuan Chee Hoe Ephrime B. Metillo Hiroshi Miyake Iffah Iesa Isara Arsiranant Krishan D. Karunarathne Libertine Agatha F. Densing FIELD GUIDE to the M. D. S. T. de Croos Mohammed Rizman-Idid Nicholas Wei Liang Yap Nithiyaa Nilamani JELLYFISH Oksto Ridho Sianturi Purinat Rungraung Sim Yee Kwang of WESTERN PACIFIC S.M. Sharifuzzaman • Bangladesh • IndonesIa • MalaysIa Widiastuti • PhIlIPPInes • sIngaPore • srI lanka • ThaIland Yean Das FIELD GUIDE to the JELLYFISH of WESTERN PACIFIC • BANGLADESH • INDONESIA • MALAYSIA • PHILIPPINES • SINGAPORE • SRI LANKA • THAILAND Centre for Marine and Coastal Studies (CEMACS) Universiti Sains Malaysia (USM) 11800 Penang, Malaysia FIELD GUIDE to the JELLYFISH of WESTERN PACIFIC The designation of geographical entities in this book, and the presentation of the materials, do not imply the impression of any opinion whatsoever on the part of IOC Sub-Commission for the Western Pacific (WESTPAC), Japan Society for the Promotion of Science (JSPS) and Universiti Sains Malaysia (USM) or other participating organizations concerning the legal status of any country, territory, or area, or its authorities, or concerning the delimitations of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IOC Sub-Commission for the Western Pacific (WESTPAC), Japan Society for the Promotion of Science (JSPS), Centre for Marine and Coastal Studies (CEMACS) or other participating organizations. This publication has been made possible in part by funding from Japan Society for the Promotion of Science (JSPS) and IOC Sub-Commission for the Western Pacific (WESTPAC) project. -
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Contributions to Zoology, 74 (1/2) 117-123 (2005) New combinations for two coronate polyp species (Atorellidae and Nausithoidae, Coronatae, Scyphozoa, Cnidaria) André Carrara Morandini1 and Gerhard Jarms2 1 Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, C.P. 11461, São Paulo, 05422-970, SP, Brazil (e-mail: [email protected]); 2 Biozentrum Grindel und Zoologisches Museum, Universität Hamburg, Martin-Luther-King Platz 3, 20146 Hamburg, Germany Keywords: Atorella, Nausithoe, polyp, scyphistoma, Stephanoscyphistoma, Stephanoscyphus, systematics, taxonomy Abstract their systematics is provided by Thiel (1936), and the knowledge of the polyp stage was reviewed by Within the order Coronatae, six valid species remain known only Jarms (1997). Research in the 1960s and 1970s by their polyp stage. The inability to relate them to any medusae showed that the so-called ‘Stephanoscyphus’ polyps genera of the group is a problem that remains to be solved in the order. With the examination of type specimens, we reassign the produce medusae of the genera Atorella Vanhöffen, species Stephanoscyphistoma sibogae and S. striatus to the genera 1902, Linuche Eschscholtz, 1829 and Nausithoe Atorella and Nausithoe respectively. Kölliker, 1853 (Werner, 1967; 1971; 1974; 1979). Based on the fact that ‘Stephanoscyphus’ polyps give rise to medusae referable to at least three other Contents genera, and supported on recommendation of the ICZN (ICZN, 1999; Kraus, 2000), Jarms (1990, Introduction .................................................................................... 117 1991) proposed the generic name Stephanoscyphis- Material and Methods .................................................................. 117 toma to accommodate species whose familial or ge- Results and Discussion ................................................................ 118 neric assignment is uncertain, as in preserved pol- Systematic accounts: new combinations ................................. 118 General comments and Conclusions ........................................