Aquaculture Journals – Table of Contents

With the financial support of

Flemish Interuniversity Councel

Aquaculture Journals – Table of Contents September 2012

Information of interest !! Feed Science and Technology * Antimicrobial Agents and Chemotherapy Applied and Environmental Microbiology Applied Microbiology and Biotechnology Aqua Aquaculture * Aquaculture Economics & Management Aquacultural Engineering * Aquaculture International * Aquaculture Nutrition * Aquaculture Research * Current Opinion in Microbiology * Diseases of Aquatic Organisms * & Shellfish Immunology * Science * Hydrobiologia * Indian Journal of Fisheries International Journal of Aquatic Science Journal of Applied Ichthyology * Journal of Applied Microbiology * Journal of Applied Phycology Journal of Aquaculture Research and Development Journal of Experimental Marine Biology and Ecology * Journal of Fish Biology Journal of Fish Diseases * Journal of Invertebrate Pathology* Journal of Microbial Ecology*

Aquaculture Journals Page: 1 of 331

Aquaculture Journals – Table of Contents

Journal of Microbiological Methods Journal of Shellfish Research Journal of the World Aquaculture Society Letters in Applied Microbiology * Marine Biology * Marine Biotechnology * Nippon Suisan Gakkaishi Reviews in Aquaculture Trends in Biotechnology * Trends in Microbiology * * full text available

Aquaculture Journals Page: 2 of 331

Aquaculture Journals – Table of Contents

BibMail Information of Interest - September, 2012

 Abstracts of papers presented at the XV International Symposium on Fish Nutrition and Feeding, Molde (Norway), June 4-7, 2012  2009 World Bank Report “Environmental Flows in Water Resources – Policies, Plans and Projects  Report of the FAO Global Conference on Aquaculture 2010 – Farming the Waters for People and Food. Puket, Thailand, September 22-25, 2010  Sustainability assessment tools to support aquaculture development: interesting article in Journal of Cleaner Production  Society meeting – Athens, June 3-7, 2012: Book of Abstracts  36th Annual Larval Fish Conference, 2-6 July 2012 - Os, Norway: programme, abstract and list of participants  FAO Press Release July 9, 2012: “Fisheries and aquaculture – enabling a vital sector to contribute more”  FAO State of World Fisheries and Aquaculture Report 2012  Meeting Report “ Aquaculture – Shaping the Value Chain”, the Aquaculture Roundtable Series TARS, Phuket-Thailand, Augusut 15-16, 2012

VLIZ Library Acquisitions no

 546 June 1, 2012  547 June 8, 2012  548 June 15, 2012  549 June 22, 2012  551 July 6, 2012

Aquaculture Journals Page: 3 of 331

Aquaculture Journals – Table of Contents

AAAnnniiimmmaaalll FFFeeeeeeddd SSSccciiieeennnccceee aaannnddd TTTeeeccchhhnnnooolllooogggyyy

VOLUME 175, PART 1-2, JULY 2012 Website

Research articles

Ruminants

Performance and carcass characteristics of finishing Black goat kids fed oil supplemented diets Sabri Saqhir, Jamal Abo Omar, Omar Naser, Ibrahim Ghanam, Jihad Abdallah Show preview | PDF (226 K) | Related articles | Related reference work articles

Effect of Mulberry leaf pellet (MUP) supplementation on rumen fermentation and nutrient digestibility in beef cattle fed on rice straw-based diets N.T. Huyen, M. Wanapat, C. Navanukraw Show preview | PDF (243 K) | Related articles | Related reference work articles

Ranking contrasting genotypes of forage peanut based on nutritive value and fermentation kinetics Alexandre Lima Ferreira, Rogério Martins Maurício, Francisco Duarte Fernandes, Marcelo Ayres Carvalho, Allan Kardec Braga Ramos, Roberto Guimarães Junior Show preview | PDF (271 K)| Related articles | Related reference work articles

Effects of adding a concentrated pomegranate extract to the ration of lactating cows on performance and udder health parameters A. Shabtay, M. Nikbachat, A. Zenou, E. Yosef, O. Arkin, O. Sneer, A. Shwimmer, A. Yaari, E. Budman, G. Agmon, J. Miron Show preview | PDF (297 K) | Related articles | Related reference work articles

Niacin delivery to the intestinal absorptive site impacts heat stress and productivity responses of high producing dairy cows during hot conditions S.R. Wrinkle, P.H. Robinson, J.E. Garrett Show preview | PDF (674 K) | Related articles | Related reference work articles

Non-ruminants

Modelling phytate degradation kinetics in soaked wheat and barley K. Blaabjerg, A.B. Strathe, H.D. Poulsen Show preview | PDF (429 K) | Related articles | Related reference work articles

The effect of peppermint essential oil and fructooligosaccharides, as alternatives to virginiamycin, on growth performance, digestibility, gut morphology and immune response of male broilers N. Khodambashi Emami, A. Samie, H.R. Rahmani, C.A. Ruiz-Feria Show preview | PDF (284 K) | Related articles | Related reference work articles

Influence of age and Enterococcus faecium NCIMB 10415 on development of small intestinal digestive physiology in piglets Lena Martin, R. Pieper, Susan Kröger, F. Goodarzi Boroojeni, W. Vahjen, K. Neumann, A.G. Van Kessel, J. Zentek

Aquaculture Journals Page: 4 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (297 K) | Related articles | Related reference work articles

Environmental impacts of feed technologies in animal production

Methane emissions by goats consuming Sericea lespedeza at different feeding frequencies R. Puchala, G. Animut, A.K. Patra, G.D. Detweiler, J.E. Wells, V.H. Varel, T. Sahlu, A.L. Goetsch Show preview | PDF (334 K) | Related articles | Related reference work articles

Short communication

Effect of aflatoxin B1 on in vitro ruminal fermentation of rations high in alfalfa hay or ryegrass hay Y.H. Jiang, H.J. Yang, P. Lund Show preview | PDF (198 K) | Related articles | Related reference work articles

Book reviews

Society of Nutrition Physiology,Editors, ,Proceedings of the Society of Nutrition Physiology vol. 21 (2012) DLG-Verlag Frankfurt,Main 978-3-7690-4105-7 208 pp., Price: 29,90 € plus postage, Softcover. Gerhard Flachowsky Show preview | PDF (103 K) | Related articles | Related reference work articles

J.P.F. D‘Mello, ,Amino Acids in Human Nutrition and Health (2012) CABI (CAB International),Wallingford, Oxfordshire, UK 544 pp., Hardcover, Price: £ 125/US$ 240/€ 165, ISBN-13: 978-1-84593-798-0. Gerhard Flachowsky Show preview | PDF (103 K) | Related articles | Related reference work articles

Previous – Top – Next

VOLUME 175, PART 3-4, AUGUST 2012 Website

Research articles

Ruminants

Estimating ruminal crude protein degradation of forages using in situ and in vitro techniques B. Edmunds, K.-H. Südekum, H. Spiekers, F.J. Schwarz Show preview | PDF (387 K) | Related articles | Related reference work articles

Estimating utilisable crude protein at the duodenum, a precursor to metabolisable protein for ruminants, from forages using a modified gas test B. Edmunds, K.-H. Südekum, H. Spiekers, M. Schuster, F.J. Schwarz Show preview | PDF (305 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 5 of 331

Aquaculture Journals – Table of Contents

Substitution of wheat dried distillers with solubles for barley silage and barley in a finishing diet increases polyunsaturated fatty acids including linoleic and alpha-linolenic acids in beef M.L. He, W.Z. Yang, M.E.R. Dugan, K.A. Beauchemin, J.J. McKinnon, T.A. McAllister Show preview | PDF (256 K) | Related articles | Related reference work articles

Ruminal and intestinal amino acid digestion of distiller's grain vary with grain source and milling process C. Li, J.Q. Li, W.Z. Yang, K.A. Beauchemin Show preview | PDF (301 K) | Related articles | Related reference work articles

Feeding value of sweet sorghum bagasse and leaf residues after juice extraction for bio-ethanol production fed to sheep as complete rations in diverse physical forms S. Anandan, Hazda Zoltan, A.A. Khan, D. Ravi, Michael Blümmel Show preview | PDF (207 K) | Related articles | Related reference work articles

Evaluation of two bacteriocin-producing probiotic lactic acid as inoculants for controlling Listeria monocytogenes in grass and maize silages Isabel Rodríguez Amado, Clara Fuciños, Paula Fajardo, Nelson P. Guerra, Lorenzo Pastrana Show preview | PDF (666 K) | Related articles | Related reference work articles

Non-ruminants

Effect of improved pellet quality from the addition of a pellet binder and/or moisture to a wheat-based diet conditioned at two different temperatures on performance, apparent metabolisable energy and ileal digestibility of starch and nitrogen in broilers M.R. Abdollahi, V. Ravindran, T.J. Wester, G. Ravindran, D.V. Thomas Show preview | PDF (254 K) | Related articles | Related reference work articles

Standardised ileal digestibility of crude protein and amino acids of UK-grown peas and faba beans by broilers H.V. Masey O’Neill, M. Rademacher, I. Mueller-Harvey, E. Stringano, S. Kightley, J. Wiseman Show preview | PDF (318 K) | Related articles | Related reference work articles

Effects of temperature, pH, incubation time and pepsin concentration on the in vitro stability of intrinsic phytase of wheat, barley and rye O. Esmaeilipour, M.M. Van Krimpen, A.W. Jongbloed, L.H. De Jonge, P. Bikker Show preview | PDF (299 K) | Related articles | Related reference work articles

Effect of feed processing on growth performance and gastric mucosa integrity in pigs from weaning until slaughter S. Millet, S. Kumar, J. De Boever, R. Ducatelle, D. De Brabander Show preview | PDF (238 K) | Related articles | Related reference work articles

General topic

Grinding performance of wheat, maize and soybeans in a multicracker system M. Thomas, M. Vrij, T. Zandstra, A.F.B. van der Poel

Aquaculture Journals Page: 6 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (761 K) | Related articles | Related reference work articles

Short communications

Impact of crude glycerol on feed milling characteristics of swine diets M.C. Shields, E. van Heugten, J. Odle, C.S. Stark Show preview | PDF (193 K) | Related articles | Related reference work articles

Rapid determination of swine available energy and amino acids in corn distillers dried grains with solubles by near-infrared reflectance spectroscopy L.J. Zhou, L.Y. Zhang, En.X. Zhang, J.T. Li, W.J. Yang, Z.Y. Wang Show preview | PDF (195 K) Related articles | Related reference work articles

Previous – Top – Next

VOLUME 171, PART 1-4, SEPTEMBER 2012 Website

Research articles

Special Issue: Plant Bioactive Compounds in Ruminant Agriculture - Impacts and Opportunities Edited by A.Z.M. Salem, S. López and P.H. Robinson

Editorial Board Show preview | PDF (56 K) | Related articles | Related reference work articles

Special Issue Contents Show preview | PDF (70 K) | Related articles | Related reference work articles

Preface

Plant bioactive compounds in ruminant agriculture – Impacts and opportunities A.Z.M. Salem, S. López, P.H. Robinson Show preview | PDF (148 K) | Related articles | Related reference work articles

In Vitro Effects of Plant Bioactive Compounds and Factors Impacting their Activity

Exogenous influences on plant secondary metabolite levels Daniel Petinatti Pavarini, Saulo Petinatti Pavarini, Michael Niehues, Norberto Peporine Lopes Show preview | PDF (468 K) | Related articles | Related reference work articles

Effect of condensed tannins on ruminal degradability of purple prairie clover (Dalea purpurea Vent.) harvested at two growth stages L. Jin, Y. Wang, A.D. Iwaasa, Z. Xu, M.P. Schellenberg, Y.G. Zhang, X.L. Liu, T.A. McAllister Show preview | PDF (264 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 7 of 331

Aquaculture Journals – Table of Contents

Effects of phenolic compounds in three oak on in vitro gas production using inoculums of two breeds of indigenous Iranian goats M. Yousef Elahi, Y. Rouzbehan, A. Rezaee Show preview | PDF (208 K) | Related articles | Related reference work articles

Influence of polyethylene glycol on in vitro gas production profiles and microbial protein synthesis of some shrub species M. Guerrero, M.A. Cerrillo-Soto, R.G. Ramírez, A.Z.M. Salem, H. González, A.S. Juárez- Reyes Show preview | PDF (250 K) | Related articles | Related reference work articles

Vegetable oil soapstocks reduce methane production and modify ruminal fermentation C. Blanco, R. Bodas, N. Prieto, L. Morán, S. Andrés, S. López, F.J. Giráldez Show preview | PDF (225 K) | Related articles | Related reference work articles

Interactions between methane mitigation additives and basal substrates on in vitro methane and VFA production J. Castro-Montoya, S. De Campeneere, G. Van Ranst, V. Fievez Show preview | PDF (806 K) | Related articles | Related reference work articles

A meta-analysis of effects of chemical composition of incubated diet and bioactive compounds on in vitro ruminal fermentation F. Klevenhusen, A. Muro-Reyes, R. Khiaosa-ard, B.U. Metzler-Zebeli, Q. Zebeli Show preview | PDF (276 K) | Related articles | Related reference work articles

Effects of phytogenic substances on rumen fermentation and methane emissions: A proposal for a research process G. Flachowsky, P. Lebzien Show preview | PDF (372 K) | Related articles | Related reference work articles

In Vivo Effects of Plant Bioactive Compounds on Rumen Fermentation and Animal Performance

Manipulation of rumen fermentation and methane production with plant secondary metabolites R. Bodas, N. Prieto, R. García-González, S. Andrés, F.J. Giráldez, S. López Show preview | PDF (561 K) | Related articles | Related reference work articles

Oral administration of leaf extracts to rumen liquid donor lambs modifies in vitro gas production of other tree leaves A.Z.M. Salem Show preview | PDF (266 K) | Related articles | Related reference work articles

Effects of tannins source (Vaccinium vitis idaea L.) on rumen microbial fermentation in vivo Adam Cieslak, Pawel Zmora, Emilia Pers-Kamczyc, Malgorzata Szumacher-Strabel Show preview | PDF (187 K) | Related articles | Related reference work articles

Methane emissions from sheep fed fresh brassicas (Brassica spp.) compared to perennial ryegrass (Lolium perenne) X.Z. Sun, G.C. Waghorn, S.O. Hoskin, S.J. Harrison, S. Muetzel, D. Pacheco Aquaculture Journals Page: 8 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (295 K) | Related articles | Related reference work articles

Voluntary intake, apparent digestibility and prediction of methane production by rumen stoichiometry in sheep fed pods of tropical E.G. Briceño-Poot, A. Ruiz-González, A.J. Chay-Canul, A.J. Ayala-Burgos, C.F. Aguilar-Pérez, F.J. Solorio-Sánchez, J.C. Ku-Vera Show preview | PDF (217 K) | Related articles | Related reference work articles

Plant extracts containing cinnamaldehyde, eugenol and capsicum oleoresin added to cattle diets: Ruminal environment, short term intake pattern and animal performance José I. Geraci, Alberto D. Garciarena, Gerardo A. Gagliostro, Karen A. Beauchemin, Dario Colombatto Show preview | PDF (259 K) | Related articles | Related reference work articles

Effects of rhubarb (Rheum spp.) and frangula (Frangula alnus) on intake, digestibility and ruminal fermentation of different diets and feedstuffs by sheep R. García-González, F.J. Giráldez, A.R. Mantecón, J.S. González, S. López Show preview | PDF (258 K) | Related articles | Related reference work articles

Effect of malate form (acid or disodium/calcium salt) supplementation on performance, ruminal parameters and blood metabolites of feedlot cattle C. Carrasco, P. Medel, A. Fuentetaja, M.D. Carro Show preview | PDF (268 K) | Related articles | Related reference work articles

Bioactive plants and plant products: Effects on animal function, health and welfare Z. Durmic, D. Blache Show preview | PDF (476 K) | Related articles | Related reference work articles

Effects of dietary supplementation of tea saponins (Ilex kudingcha C.J. Tseng) on ruminal fermentation, digestibility and plasma antioxidant parameters in goats C.S. Zhou, W.J. Xiao, Z.L. Tan, A.Z.M. Salem, M.M. Geng, S.X. Tang, M. Wang, X.F. Han, J.H. Kang Show preview | PDF (209 K) | Related articles | Related reference work articles

Inhibition of ruminal bacteria involved in lactic acid metabolism by extracts from Australian plants P.G. Hutton, Z. Durmic, E.L. Ghisalberti, G.R. Flematti, R.M. Duncan, C.F. Carson, T.V. Riley, P.E. Vercoe Show preview | PDF (332 K) | Related articles | Related reference work articles

Effects of Havardia albicans supplementation on feed consumption and dry matter digestibility of sheep and the biology of Haemonchus contortus H.H. Galicia-Aguilar, L.A. Rodríguez-González, C.M. Capetillo-Leal, R. Cámara-Sarmiento, A.J. Aguilar-Caballero, C.A. Sandoval-Castro, J.F.J. Torres-Acosta Show preview | PDF (238 K) | Related articles | Related reference work articles

Short term consumption of Havardia albicans tannin rich fodder by sheep: Effects on feed intake, diet digestibility and excretion of Haemonchus contortus eggs

Aquaculture Journals Page: 9 of 331

Aquaculture Journals – Table of Contents

Francisco Alejandro Méndez-Ortíz, Carlos Alfredo Sandoval-Castro, Juan Felipe de Jesús Torres-Acosta Show preview | PDF (234 K) | Related articles | Related reference work articles

Using plant bioactive materials to control gastrointestinal tract helminths in C.A. Sandoval-Castro, J.F.J. Torres-Acosta, H. Hoste, A.Z.M. Salem, J.I. Chan-Pérez Show preview | PDF (325 K) | Related articles | Related reference work articles

Previous – Top – Next

Aquaculture Journals Page: 10 of 331

Aquaculture Journals – Table of Contents

AAAnnntttiiimmmiiicccrrrooobbbiiiaaalll AAAgggeeennntttsss aaannnddd CCChhheeemmmooottthhheeerrraaapppyyy

VOLUME 56, PART 7, July 2012 Website

Research articles

Chemistry; Biosynthesis

Function of Cytochrome P450 MycCI and MycG in Micromonospora griseorubida, a Producer of the Macrolide Antibiotic Mycinamicin Yojiro Anzai, Shu-ichi Tsukada, Ayami Sakai, Ryohei Masuda, Chie Harada, Ayaka Domeki, Shengying Li, Kenji Kinoshita, David H. Sherman, and Fumio Kato Abstract Full Text PDF Figures Supplemental material

Heme Protein and Hydroxyarginase Necessary for Biosynthesis of D-Cycloserine Takanori Kumagai, Kisho Takagi, Yusuke Koyama, Yasuyuki Matoba, Kosuke Oda, Masafumi Noda, and Masanori Sugiyama Abstract Full Text PDF Figures

Mechanisms of Action: Physiological Effects

The Spiroindolone Drug Candidate NITD609 Potently Inhibits Gametocytogenesis and Blocks Plasmodium falciparum Transmission to Anopheles Mosquito Vector J. C. van Pelt-Koops, H. E. Pett, W. Graumans, M. van der Vegte-Bolmer, G. J. van Gemert, M. Rottmann, B. K. S. Yeung,T. T. Diagana, and R. W. Sauerwein Abstract Full Text PDF Figures

Isolation and Characterization of Signermycin B, an Antibiotic That Targets the Dimerization Domain of Histidine Kinase WalK Takafumi Watanabe, Masayuki Igarashi, Toshihide Okajima, Eiji Ishii, Hirokazu Kino, Masaki Hatano, Ryuichi Sawa, Maya Umekita, Tomoyuki Kimura, Sho Okamoto, Yoko Eguchi, Yuzuru Akamatsu, and Ryutaro Utsumi Abstract Full Text PDF Figures Supplemental material

The Antidepressant Sertraline Provides a Promising Therapeutic Option for Neurotropic Cryptococcal Infections Bing Zhai, Cheng Wu, Linqi Wang, Matthew S. Sachs, and Xiaorong Lin Abstract Full Text PDF Figures Supplemental material

Bactericidal Activity of ACH-702 against Nondividing and Biofilm Staphylococci Steven D. Podos, Jane A. Thanassi, Melissa Leggio, and Michael J. Pucci Abstract Full Text PDF Figures

Mechanisms of Resistance

Systematic Analysis of Metallo-β-Lactamases Using an Automated Database Michael Widmann, Jürgen Pleiss, and Peter Oelschlaeger Abstract Full Text PDF Figures Supplemental material

The Order Bacillales Hosts Functional Homologs of the Worrisome cfr Antibiotic Resistance Gene Lykke H. Hansen, Mercè H. Planellas, Katherine S. Long, and Birte Vester Abstract Full Text PDF Figures

Aquaculture Journals Page: 11 of 331

Aquaculture Journals – Table of Contents

Contribution of Phe-7 to Tat-Dependent Export of β-Lactamase in Xanthomonas campestris Chen-Wei Lee, Yi-Hsuan Tseng, Fu-Seng Deng, Juey-Wen Lin, Yi-Hsiung Tseng, and Shu-Fen Weng Abstract Full Text PDF Figures pfmdr1 Amplification Is Related to Increased Plasmodium falciparum In Vitro Sensitivity to the Bisquinoline Piperaquine M. I. Veiga, P. E. Ferreira, M. Malmberg, L. Jörnhagen, A. Björkman, F. Nosten,and J. P. Gil Abstract Full Text PDF Figures Supplemental material

The Posttranslocational Chaperone Lipoprotein PrsA Is Involved in both Glycopeptide and Oxacillin Resistance in Staphylococcus aureus Ambre Jousselin, Adriana Renzoni, Diego O. Andrey, Antoinette Monod, Daniel P. Lew, and William L. Kelley Abstract Full Text PDF Figures

Multiplex PCR To Identify Macrolide Resistance Determinants in Mannheimia haemolytica and Pasteurella multocida Simon Rose, Benoit Desmolaize, Puneet Jaju, Cornelia Wilhelm, Ralf Warrass, and Stephen Douthwaite Abstract Full Text PDF Figures

HDQ, a Potent Inhibitor of Plasmodium falciparum Proliferation, Binds to the Quinone Reduction Site of the Cytochrome bc1 Complex Cindy Vallières, Nicholas Fisher, Thomas Antoine, Mohammed Al-Helal, Paul Stocks, Neil G. Berry, Alexandre S. Lawrenson, Stephen A. Ward, Paul M. O'Neill, Giancarlo A. Biagini, and Brigitte Meunier Abstract Full Text PDF Figures Supplemental material

Dual Roles of FmtA in Staphylococcus aureus Cell Wall Biosynthesis and Autolysis Aneela Qamar and Dasantila Golemi-Kotra Abstract Full Text PDF Figures Supplemental material

Deciphering the Function of the Outer Membrane Protein OprD Homologue of Acinetobacter baumannii Manuella Catel-Ferreira, Rony Nehmé, Virginie Molle, Jesús Aranda, Emeline Bouffartigues, Sylvie Chevalier, Germán Bou, Thierry Jouenne, and Emmanuelle Dé Abstract Full Text PDF Figures

Induction of Mycobacterial Resistance to Quinolone Class Antimicrobials Muhammad Malik, Kalyan Chavda, Xilin Zhao, Nirali Shah, Syed Hussain, Natalia Kurepina, Barry N. Kreiswirth, Robert J. Kerns, and Karl Drlica Abstract Full Text PDF Figures

Prominence of an O75 Clonal Group (Clonal Complex 14) among Non-ST131 Fluoroquinolone-Resistant Escherichia coli Causing Extraintestinal Infections in Humans and Dogs in Australia Joanne L. Platell, Darren J. Trott, James R. Johnson, Peter Heisig, Anke Heisig, Connie R. Clabots, Brian Johnston, and Rowland N. Cobbold Abstract Full Text PDF Figures

Aquaculture Journals Page: 12 of 331

Aquaculture Journals – Table of Contents

Development of Novel PCR Assays To Detect Azole Resistance-Mediating Mutations of the Aspergillus fumigatus cyp51A Gene in Primary Clinical Samples from Neutropenic Patients Birgit Spiess, Wolfgang Seifarth, Natalia Merker, Susan J. Howard, Mark Reinwald, Anne Dietz, Wolf-Karsten Hofmann, and Dieter Buchheidt Abstract Full Text PDF Figures

Transferable Plasmid-Mediated Resistance to Linezolid Due to cfr in a Human Clinical Isolate of Enterococcus faecalis Lorena Diaz, Pattarachai Kiratisin, Rodrigo E. Mendes, Diana Panesso, Kavindra V. Singh, and Cesar A. Arias Abstract Full Text PDF Figures

Biochemical and Genetic Characterization of Carbapenem-Hydrolyzing β- Lactamase OXA-229 from Acinetobacter bereziniae Rémy A. Bonnin, Alain A. Ocampo-Sosa, Laurent Poirel, Hélène Guet-Revillet, and Patrice Nordmann Abstract Full Text PDF Figures Supplemental material

Combined Spatial Limitation around Residues 16 and 108 of Plasmodium falciparum Dihydrofolate Reductase Explains Resistance to Cycloguanil Jarunee Vanichtanankul, Supannee Taweechai, Chayasith Uttamapinant, Penchit Chitnumsub, Tirayut Vilaivan, Yongyuth Yuthavong,and Sumalee Kamchonwongpaisan Abstract Full Text PDF Figures

Characterizations of Clinical Isolates of Clostridium difficile by Toxin Genotypes and by Susceptibility to 12 Antimicrobial Agents, Including Fidaxomicin (OPT- 80) and Rifaximin: a Multicenter Study in Taiwan Chun-Hsing Liao, Wen-Chien Ko, Jang-Jih Lu, and Po-Ren Hsueh Abstract Full Text PDF Figures

RmtF, a New Member of the Aminoglycoside Resistance 16S rRNA N7 G1405 Methyltransferase Family Marc Galimand, Patrice Courvalin, and Thierry Lambert Abstract Full Text PDF Figures

Characterization of Globally Spread Escherichia coli ST131 Isolates (1991 to 2010) Ângela Novais, João Pires, Helena Ferreira, Luísa Costa, Carolina Montenegro, Claudia Vuotto, Gianfranco Donelli, Teresa M. Coque, and Luísa Peixe Abstract Full Text PDF Figures

First Identification of OXA-72 Carbapenemase from Acinetobacter pittii in Colombia Maria Camila Montealegre, Juan José Maya, Adriana Correa, Paula Espinal, Maria F. Mojica, Sory J. Ruiz, Fernando Rosso, Jordi Vila, John P. Quinn, and Maria Virginia Villegas Abstract Full Text PDF

Substrate Spectrum Extension of PenA in Burkholderia thailandensis with a Single Amino Acid Deletion, Glu168del Hyojeong Yi, Karan Kim, Kwang-Hwi Cho, Oksung Jung, and Heenam Stanley Kim Abstract Full Text PDF Figures

Chromosome-Encoded Extended-Spectrum Class A β-Lactamase MIN-1 from Minibacterium massiliensis

Aquaculture Journals Page: 13 of 331

Aquaculture Journals – Table of Contents

Béatrice Bercot, Patrice Nordmann, Michel Drancourt, and Laurent Poirel Abstract Full Text PDF Figures

Susceptibility

Alanyl-Phosphatidylglycerol and Lysyl-Phosphatidylglycerol Are Translocated by the Same MprF Flippases and Have Similar Capacities To Protect against the Antibiotic Daptomycin in Staphylococcus aureus Christoph J. Slavetinsky, Andreas Peschel, and Christoph M. Ernst Abstract Full Text PDF Figures

In Vitro Activity of Ertapenem versus Ceftriaxone against Neisseria gonorrhoeae Isolates with Highly Diverse Ceftriaxone MIC Values and Effects of Ceftriaxone Resistance Determinants: Ertapenem for Treatment of Gonorrhea? Magnus Unemo, Daniel Golparian, Athena Limnios, David Whiley, Makoto Ohnishi, Monica M. Lahra, and John W. Tapsall Abstract Full Text PDF Figures

In Vitro Anti-Trypanosoma cruzi Activity of Dronedarone, a Novel Amiodarone Derivative with an Improved Safety Profile Gustavo Benaim, Vanessa Hernandez-Rodriguez, Sheira Mujica-Gonzalez, Lourdes Plaza- Rojas, May Li Silva, Nereida Parra-Gimenez, Yael Garcia-Marchan, Alberto Paniz-Mondolfi, and Graciela Uzcanga Abstract Full Text PDF Figures

Potent Synergistic Effect of Doxycycline with Fluconazole against Candida albicans Is Mediated by Interference with Iron Homeostasis Alessandro Fiori and Patrick Van Dijck Abstract Full Text PDF Figures

Caspofungin Etest Susceptibility Testing of Candida Species: Risk of Misclassification of Susceptible Isolates of C. glabrata and C. krusei when Adopting the Revised CLSI Caspofungin Breakpoints Maiken Cavling Arendrup, Michael A. Pfaller, and the Danish Fungaemia Study Group Full Text PDF Figures

In Vitro Activities of the New Antitubercular Agents PA-824 and BTZ043 against Nocardia brasiliensis Lucio Vera-Cabrera, Mayra Paola Campos-Rivera, Norma Alejandra Gonzalez-Martinez, Jorge Ocampo-Candiani, and Stewart T. Cole Abstract Full TextPDF Figures

In Vitro Activity of TP-271 against Mycobacterium abscessus, Mycobacterium fortuitum, and Nocardia Species Michael Cynamon, Jeff Jureller, Balaji Desai, Krithika Ramachandran, Sklaney, and Trudy H. Grossman Abstract Full Text PDF Figures

In Vitro Susceptibility of Pythium insidiosum Isolates to Aminoglycoside Antibiotics and Tigecycline Deise Luiza Mahl, Francielli Pantella Kunz de Jesus, Érico Silva Loreto, Régis Adriel Zanette, Laerte Ferreiro, Maiara Ben Pilotto, Sydney Hartz Alves, and Janio Morais Santurio Abstract Full Text PDF

Aquaculture Journals Page: 14 of 331

Aquaculture Journals – Table of Contents

Analytical Procedures

Malachite Green Interferes with Postantibiotic Recovery of Mycobacteria Ekaterina Gelman, John D. McKinney, and Neeraj Dhar Abstract Full Text PDF Figures

Antiviral Agents

In Vitro Antiviral Characteristics of HIV-1 Attachment Inhibitor BMS-626529, the Active Component of the Prodrug BMS-663068 Beata Nowicka-Sans, Yi-Fei Gong, Brian McAuliffe, Ira Dicker, Hsu-Tso Ho, Nannan Zhou, Betsy Eggers, Pin-Fang Lin, Neelanjana Ray, Megan Wind-Rotolo, Li Zhu, Antara Majumdar, David Stock, Max Lataillade, George J. Hanna, John D. Matiskella, Yasutsugu Ueda, Tao Wang, John F. Kadow, Nicholas A. Meanwell, and Mark Krystal Abstract Full Text PDF Figures Supplemental material

Artemisinin-Derived Dimer Diphenyl Phosphate Is an Irreversible Inhibitor of Human Cytomegalovirus Replication Ran He, Kyoungsook Park, Hongyi Cai, Arun Kapoor, Michael Forman, Bryan Mott, Gary H. Posner, and Ravit Arav-Boger Abstract Full Text PDF Figures Supplemental material

Antiviral Effects of Small Interfering RNA Simultaneously Inducing RNA Interference and Type 1 Interferon in Coxsackievirus Myocarditis Jeonghyun Ahn, Ara Ko, Eun Jung Jun, Minah Won, Yoo Kyum Kim, Eun-Seon Ju, Eun Seok Jeon, and Heuiran Lee Abstract Full Text PDF Figures Supplemental material

Validation of the Rapid Fluorescent Focus Inhibition Test for Rabies Virus- Neutralizing Antibodies in Clinical Samples Stefan Kostense, Susan Moore, Arjen Companjen, Alexander B. H. Bakker, Wilfred E. Marissen, Rie von Eyben, Gerrit Jan Weverling, Cathleen Hanlon, and Jaap Goudsmit Abstract Full Text PDF Figures

Pharmacokinetic Comparison of a Single Oral Dose of Polymorph Form I versus Form V Capsules of the Antiorthopoxvirus Compound ST-246 in Human Volunteers Jarasvech Chinsangaram, Kady M. Honeychurch, Shanthakumar R. Tyavanagimatt, Tove' C. Bolken, Robert Jordan, Kevin F. Jones, Thomas Marbury, Israel Lichtenstein, Margaret Pickens, Michael Corrado, Patrick Landis, Jean M. Clarke, Annie M. Frimm, and Dennis E. Hruby Abstract Full Text PDF Figures

Susceptibility of Herpes Simplex Virus Isolated from Genital Herpes Lesions to ASP2151, a Novel Helicase-Primase Inhibitor Kiyomitsu Katsumata, Adriana Weinberg, Koji Chono, Shoji Takakura, Toru Kontani, and Hiroshi Suzuki Abstract Full Text PDF Figures

UC781 Microbicide Gel Retains Anti-HIV Activity in Cervicovaginal Lavage Fluids Collected following Twice-Daily Vaginal Application Richard E. Haaland, Tammy Evans-Strickfaden, Angela Holder, Chou-Pong Pau, Janet M. McNicholl, Supraporn Chaikummao, Wannee Chonwattana, and Clyde E. Hart Abstract Full Text PDF Figures

Aquaculture Journals Page: 15 of 331

Aquaculture Journals – Table of Contents

Activity of Human Immunodeficiency Virus Type 1 Protease Inhibitors against the Initial Autocleavage in Gag-Pol Polyprotein Processing David A. Davis, Erin E. Soule, Katharine S. Davidoff, Sarah I. Daniels, Nicole E. Naiman, and Robert Yarchoan Abstract Full Text PDF Figures Supplemental material

Resistance Analysis of the Hepatitis C Virus NS3 Protease Inhibitor Asunaprevir Fiona McPhee, Jacques Friborg, Steven Levine, Chaoqun Chen, Paul Falk, Fei Yu, Dennis Hernandez, Min S. Lee, Susan Chaniewski, Amy K. Sheaffer, and Claudio Pasquinelli Abstract Full Text PDF Figures

Metabolic Activation of the Anti-Hepatitis C Virus Nucleotide Prodrug PSI- 352938 Congrong Niu, Tatiana Tolstykh, Haiying Bao, Yeojin Park, Darius Babusis, Angela M. Lam, Shalini Bansal, Jinfa Du, Wonsuk Chang, P. Ganapati Reddy, Hai-Ren Zhang, Joseph Woolley, Li-Quan Wang, Piyun B. Chao, Adrian S. Ray, Michael J. Otto, Michael J. Sofia, Phillip A. Furman, and Eisuke Murakami Abstract Full Text PDF Figures

Intrapulmonary Distribution and Pharmacokinetics of Laninamivir, a Neuraminidase Inhibitor, after a Single Inhaled Administration of Its Prodrug, Laninamivir Octanoate, in Healthy Volunteers Hitoshi Ishizuka, Kaoru Toyama, Satoshi Yoshiba, Hiromi Okabe, and Hidetoshi Furuie Abstract Full Text PDF Figures

The Cyclophilin Inhibitor SCY-635 Disrupts Hepatitis C Virus NS5A-Cyclophilin A Complexes Sam Hopkins, Michael Bobardt, Udayan Chatterji, Jose A. Garcia-Rivera, Precious Lim, and Philippe A. Gallay Abstract Full Text PDF Figures

HIV-1 Tropism Evolution after Short-Term Maraviroc Monotherapy in HIV-1- Infected Patients Alejandro Gonzalez-Serna, María Concepción Romero-Sánchez, Sara Ferrando-Martinez, Miguel Genebat, Francesc Vidal, Maria Ángeles Muñoz-Fernández, María Antonia Abad, Manuel Leal, and Ezequiel Ruiz-Mateos Abstract Full Text PDF Figures Supplemental material

Etravirine Concentrations in the Cervicovaginal Compartment in HIV-1- Infected Women Receiving Etravirine-Containing Antiretroviral Therapy: DIVA 02 Study C. Clavel, G. Peytavin, R. Tubiana, C. Soulié, E. Courbon, C. Crenn-Hebert, H. Ichou, C. Blanc, L. Schneider, C. Katlama, A.-G. Marcelin, and L. Mandelbrot Abstract Full Text PDF

Epidemiology and Surveillance

Spanish Multicenter Study of the Epidemiology and Mechanisms of Amoxicillin- Clavulanate Resistance in Escherichia coli Adriana Ortega, Jesús Oteo, Maitane Aranzamendi-Zaldumbide, Rosa M. Bartolomé, Germán Bou, Emilia Cercenado, M. Carmen Conejo, Juan José González-López, Mercedes Marín, Luis Martínez-Martínez, María Merino, Ferran Navarro, Antonio Oliver, Álvaro Pascual, Alba Rivera, Jesús Rodríguez-Baño, Irene Weber, Belén Aracil, and José Campos Abstract Full Text PDF Figures

Aquaculture Journals Page: 16 of 331

Aquaculture Journals – Table of Contents

An Outbreak of Mycoplasma pneumoniae Caused by a Macrolide-Resistant Isolate in a Nursery School in China Yong Wang, Shaofu Qiu, Guang Yang, Lixue Song, Wenli Su, Yuanyong Xu, Leili Jia, Ligui Wang, Rongzhang Hao, Chuanfu Zhang, Jingmei Liu, Xiuping Fu, Jinrong He, Jingshan Zhang, Zhenjun Li, and Hongbin Song Abstract Full Text PDF Figures

Role of Common blaOXA-24/OXA-40-Carrying Platforms and Plasmids in the Spread of OXA-24/OXA-40 among Acinetobacter Species Clinical Isolates Filipa Grosso, Sandra Quinteira, Laurent Poirel, Ângela Novais, and Luísa Peixe Abstract Full Text PDF Figures

Decreased Susceptibility to Noncarbapenem Antimicrobials in Extended- Spectrum-β-Lactamase-Producing Escherichia coli and Klebsiella pneumoniae Isolates in Toronto, Canada Christopher F. Lowe, Allison McGeer, Matthew P. Muller, and Kevin Katz, for the Toronto ESBL Working Group Abstract Full Text PDF Figures

Decline and Rise of the Antimicrobial Susceptibility of Streptococcus pneumoniae Isolated from Middle Ear Fluid in Children: Influence of Changes in Circulating Serotypes Emilio Pérez-Trallero, José M. Marimón, Marta Alonso, María Ercibengoa, and José M. García-Arenzana Abstract Full Text PDF

Worldwide Appraisal and Update (2010) of Telavancin Activity Tested against a Collection of Gram-Positive Clinical Pathogens from Five Continents Rodrigo E. Mendes, Helio S. Sader, David J. Farrell, and Ronald N. Jones Abstract Full Text PDF

Dogs of Nomadic Pastoralists in Northern Kenya Are Reservoirs of Plasmid- Mediated Cephalosporin- and Quinolone-Resistant Escherichia coli, Including Pandemic Clone B2-O25-ST131 Katerina Albrechtova, Monika Dolejska, Alois Cizek, Dagmar Tausova, Jiri Klimes, Lily Bebora, and Ivan Literak Abstract Full Text PDF Figures

Experimental Therapeutics

Sontochin as a Guide to the Development of Drugs against Chloroquine- Resistant Malaria Sovitj Pou, Rolf W. Winter, Aaron Nilsen, Jane Xu Kelly, Yuexin Li, J. Stone Doggett, Erin W. Riscoe, Keith W. Wegmann, David J. Hinrichs, and Michael K. Riscoe Abstract Full Text PDF Figures

Activities of Moxifloxacin in Combination with Macrolides against Clinical Isolates of Mycobacterium abscessus and Mycobacterium massiliense Go-Eun Choi, Ki-Nam Min, Choul-Jae Won, Kyeongman Jeon, Sung Jae Shin, and Won-Jung Koh Abstract Full Text PDF Figures Supplemental material

Efficacy of Bacteriophage Therapy in Experimental Sepsis and Meningitis Caused by a Clone O25b:H4-ST131 Escherichia coli Strain Producing CTX-M-15

Aquaculture Journals Page: 17 of 331

Aquaculture Journals – Table of Contents

Flavie Pouillot, Maryline Chomton, Hélène Blois, Celine Courroux, Julien Noelig, Philippe Bidet, Edouard Bingen, and Stéphane Bonacorsi Abstract Full Text PDF Figures Supplemental material

Evaluation of Arylimidamides DB1955 and DB1960 as Candidates against Visceral Leishmaniasis and Chagas' Disease: In Vivo Efficacy, Acute Toxicity, Pharmacokinetics, and Toxicology Studies Xiaohua Zhu, Qiang Liu, Sihyung Yang, Toufan Parman, Carol E. Green, Jon C. Mirsalis, Maria de Nazaré Correia Soeiro, Elen Mello de Souza, Cristiane França da Silva, Denise da Gama Jaen Batista, Chad E. Stephens, Moloy Banerjee, Abdelbasset A. Farahat, Manoj Munde, W. David Wilson, David W. Boykin, Michael Zhuo Wang, and Karl A. Werbovetz Abstract Full Text PDF Figures Supplemental material

Front-Loaded Linezolid Regimens Result in Increased Killing and Suppression of the Accessory Gene Regulator System of Staphylococcus aureus Brian T. Tsuji, Tanya Brown, Ridhi Parasrampuria, Daniel A. Brazeau, Alan Forrest, Pamela A. Kelchlin, Patricia N. Holden, Charles A. Peloquin, Debra Hanna, and Jurgen B. Bulitta Abstract Full Text PDF Figures

Rifapentine Is Not More Active than Rifampin against Chronic Tuberculosis in Guinea Pigs Noton K. Dutta, Peter B. Illei, Charles A. Peloquin, Michael L. Pinn, Khisimuzi E. Mdluli, Eric L. Nuermberger, Jacques H. Grosset, and Petros C. Karakousis Abstract Full Text PDF Figures Supplemental material

In Vitro Activity of MK-7655, a Novel β-Lactamase Inhibitor, in Combination with Imipenem against Carbapenem-Resistant Gram-Negative Bacteria Elizabeth B. Hirsch, Kimberly R. Ledesma, Kai-Tai Chang, Michael S. Schwartz, Mary R. Motyl, and Vincent H. Tam Abstract Full Text PDF Figures

Effect of Coadministration of Vancomycin and BMP-2 on Cocultured Staphylococcus aureus and W-20-17 Mouse Bone Marrow Stromal Cells In Vitro A. H. Nguyen, S. Kim, W. J. Maloney, J. C. Wenke, and Y. Yang Abstract Full Text PDF Figures

Efficacy of Daptomycin-Cloxacillin Combination in Experimental Foreign-Body Infection Due to Methicillin-Resistant Staphylococcus aureus C. Garrigós, O. Murillo, J. Lora-Tamayo, R. Verdaguer, F. Tubau, C. Cabellos, J. Cabo, and J. Ariza Abstract Full Text PDF Figures

UVC Light Prophylaxis for Cutaneous Wound Infections in Mice Tianhong Dai, Barbara Garcia, Clinton K. Murray, Mark S. Vrahas, and Michael R. Hamblin Abstract Full Text PDF Figures

Antimalarial Activity of the Anticancer Histone Deacetylase Inhibitor SB939 Subathdrage D. M. Sumanadasa, Christopher D. Goodman, Andrew J. Lucke, Tina Skinner- Adams, Ishani Sahama, Ashraful Haque, Tram Anh Do, Geoffrey I. McFadden, David P. Fairlie, and Katherine T. Andrews Abstract Full Text PDF Figures Supplemental material

Drug Efflux by a Small Multidrug Resistance Protein Is Inhibited by a Transmembrane Peptide Bradley E. Poulsen and Charles M. Deber

Aquaculture Journals Page: 18 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

Mouse Model for Efficacy Testing of Antituberculosis Agents via Intrapulmonary Delivery Mercedes Gonzalez-Juarrero, Lisa K. Woolhiser, Elizabeth Brooks, Mary Ann DeGroote, and Anne J. Lenaerts Abstract Full Text PDF Figures

Nonspecific Effect of Mycograb on Amphotericin B MIC D. L. Richie, M. A. Ghannoum, N. Isham, K. V. Thompson, and N. S. Ryder Abstract Full Text PDF

Clinical Therapeutics

Effect of Clarithromycin in Inflammatory Markers of Patients with Ventilator- Associated Pneumonia and Sepsis Caused by Gram-Negative Bacteria: Results from a Randomized Clinical Study Aikaterini Spyridaki, Maria Raftogiannis, Anastasia Antonopoulou, Thomas Tsaganos, Christina Routsi, Fotini Baziaka, Vassiliki Karagianni, Maria Mouktaroudi, Pantelis Koutoukas, Aimilia Pelekanou, Anastasia Kotanidou, Stylianos E. Orfanos, Jos W. M. van der Meer, Mihai G. Netea, and Evangelos J. Giamarellos-Bourboulis Abstract Full Text PDF Figures

Impact of Cefepime Therapy on Mortality among Patients with Bloodstream Infections Caused by Extended-Spectrum-β-Lactamase-Producing Klebsiella pneumoniae and Escherichia coli Teena Chopra, Dror Marchaim, Jennifer Veltman, Paul Johnson, Jing J. Zhao, Ryan Tansek, Dania Hatahet, Khawar Chaudhry, Jason M. Pogue, Hiro Rahbar, Ting-Yi Chen, Thientu Truong, Victor Rodriguez, Joseph Ellsworth, Luigino Bernabela, Ashish Bhargava, Adnan Yousuf, George Alangaden, and Keith S. Kaye Abstract Full Text PDF Figures

Impact of First-Line Antifungal Agents on the Outcomes and Costs of Candidemia Young Eun Ha, Kyong Ran Peck, Eun-Jeong Joo, Shin Woo Kim, Sook-In Jung, Hyun Ha Chang, Kyong Hwa Park, and Sang Hoon Han Abstract Full Text PDF

Pharmacology

Modeling Approach To Characterize Intraocular Doripenem Pharmacokinetics after Intravenous Administration to Rabbits, with Tentative Extrapolation to Humans Oudy Semoun, Sandrine Marchand, Nicolas Grégoire, Isabelle Lamarche, Christophe Adier, Laurent Laroche, Pablo Goldschmidt, and William Couet Abstract Full Text PDF Figures

The Anthelmintic Triclabendazole and Its Metabolites Inhibit the Membrane Transporter ABCG2/BCRP Borja Barrera, Jon A. Otero, Estefanía Egido, Julio G. Prieto, Anna Seelig, Ana I. Álvarez, and Gracia Merino Abstract Full Text PDF Figures

Prospective Screening of Novel Antibacterial Inhibitors of Dihydrofolate Reductase for Mutational Resistance

Aquaculture Journals Page: 19 of 331

Aquaculture Journals – Table of Contents

Kathleen M. Frey, Kishore Viswanathan, Dennis L. Wright, and Amy C. Anderson Abstract Full Text PDF Figures

Effect of Telaprevir on the Pharmacokinetics of Buprenorphine in Volunteers on Stable Buprenorphine/Naloxone Maintenance Therapy Xia Luo, Jose Trevejo, Rolf P. G. van Heeswijk, Frances Smith, and Varun Garg Abstract Full Text PDF Figures

Pharmacodynamic Evaluation of the Activity of Antibiotics against Hemin- and Menadione-Dependent Small-Colony Variants of Staphylococcus aureus in Models of Extracellular (Broth) and Intracellular (THP-1 Monocytes) Infections L. G. Garcia, S. Lemaire, B. C. Kahl, K. Becker, R. A. Proctor, O. Denis, P. M. Tulkens, and F. Van Bambeke Abstract Full Text PDF Figures Supplemental material

A Pharmacodynamic Model of Ganciclovir Antiviral Effect and Toxicity for Lymphoblastoid Cells Suggests a New Dosing Regimen To Treat Cytomegalovirus Infection Audrey Janoly-Dumenil, Isabelle Rouvet, Nathalie Bleyzac, Florence Morfin, Marie-Therese Zabot, and Michel Tod Abstract Full Text PDF Figures

Oseltamivir Pharmacokinetics and Clinical Experience in Neonates and Infants during an Outbreak of H1N1 Influenza A Virus Infection in a Neonatal Intensive Care Unit Joseph F. Standing, Angela Nika, Vasileios Tsagris, Ioannis Kapetanakis, Helena C. Maltezou, Dimitris A. Kafetzis, and Maria N. Tsolia Abstract Full Text PDF Figures

Population Pharmacokinetics and Pharmacodynamics of Ofloxacin in South African Patients with Multidrug-Resistant Tuberculosis Emmanuel Chigutsa, Sandra Meredith, Lubbe Wiesner, Nesri Padayatchi, Joe Harding, Prashini Moodley, William R. Mac Kenzie, Marc Weiner, Helen McIlleron,and Carl M. J. Kirkpatrick Abstract Full Text PDF Figures

Optimal Dosing of Miltefosine in Children and Adults with Visceral Leishmaniasis Thomas P. C. Dorlo, Alwin D. R. Huitema, Jos H. Beijnen, and Peter J. de Vries Abstract Full Text PDF Figures

Pharmacokinetics of Intraperitoneal and Intravenous Fosfomycin in Automated Peritoneal Dialysis Patients without Peritonitis Selma Tobudic, Peter Matzneller, Brigitte Stoiser, Judith Maria Wenisch, Markus Zeitlinger, Andreas Vychytil, Walter Jaeger, Michaela Boehmdorfer, Gottfried Reznicek, and Heinz Burgmann Abstract Full Text PDF Figures

Letters to the Editor

Characterization of a Transmissible Plasmid Encoding VEB-1 and VIM-1 in Proteus mirabilis C. C. Papagiannitsis, V. Miriagou, S. D. Kotsakis, E. Tzelepi,A. C. Vatopoulos, E. Petinaki, and L. S. Tzouvelekis Full Text PDF Figures

Aquaculture Journals Page: 20 of 331

Aquaculture Journals – Table of Contents

Characterization of Extended-Spectrum-β-Lactamase-Producing Vibrio parahaemolyticus Marcus Ho Yin Wong, Ming Liu, Hoi Ying Wan, and Sheng Chen Full Text PDF Figures

Successful Use of Posaconazole for Treatment of Blastomycosis Laurie A. Proia and Darin O. Harnisch Full Text PDF

Detection of OXA-48 Carbapenemase in the Pandemic Clone Escherichia coli O25b:H4-ST131 in the Course of Investigation of an Outbreak of OXA-48- Producing Klebsiella pneumoniae Dearbháile Morris, Edel McGarry, Meaghan Cotter, Virginie Passet, Maureen Lynch, Catherine Ludden, Margaret M. Hannan, Sylvain Brisse, and Martin Cormican Full Text PDF

A Plasmid-Encoded Class 1 Integron Contains GES-Type Extended-Spectrum β-Lactamases in Enterobacteriaceae Clinical Isolates in Mexico Humberto Barrios, Ulises Garza-Ramos, Luz Edith Ochoa-Sanchez, Fernando Reyna-Flores, Teresa Rojas-Moreno, Rayo Morfin-Otero, Eduardo Rodriguez-Noriega, Elvira Garza- Gonzalez, Gloria Gonzalez, Patricia Volkow, Patricia Cornejo-Juarez, The Red-MEReBa Study Group, and Jesus Silva-Sanchez Full Text PDF

Colistin Distribution in the Peritoneal Fluid of a Patient with Severe Peritonitis Olivier Mimoz, Franck Petitpas, Nicolas Grégoire, Patrice Gobin, Sandrine Marchand, and William Couet Full Text PDF Figures

Double-Carbapenem Therapy Not Proven To Be More Active than Carbapenem Monotherapy against KPC-Positive Klebsiella pneumoniae Kenneth S. Thomson Full Text PDF

Reply to “Double-Carbapenem Therapy Not Proven To Be More Active than Carbapenem Monotherapy against KPC-Positive Klebsiella pneumoniae” Catharine C. Bulik and David P. Nicolau Full Text PDF Figures

Management of Pharyngeal Gonorrhea Is Crucial To Prevent the Emergence and Spread of Antibiotic-Resistant Neisseria gonorrhoeae Takashi Deguchi, Mitsuru Yasuda, and Shin Ito Full Text PDF

Reply to “Management of Pharyngeal Gonorrhea Is Crucial To Prevent the Emergence and Spread of Antibiotic-Resistant Neisseria gonorrhoeae” Magnus Unemo, Robert Nicholas, Daniel Golparian, Patrice Sednaoui, and Makoto Ohnishi Full Text PDF

Previous – Top – Next

Aquaculture Journals Page: 21 of 331

Aquaculture Journals – Table of Contents

VOLUME 56, PART 8, August 2012 Website

Research articles

Minireviews

Adverse Effects of Antimicrobials via Predictable or Idiosyncratic Inhibition of Host Mitochondrial Components Alison E. Barnhill, Matt T. Brewer, and Steve A. Carlson Abstract Full Text PDF

Chemistry; Biosynthesis

Different Biosynthetic Pathways to Fosfomycin in Pseudomonas syringae and Streptomyces Species Seung Young Kim, Kou-San Ju, William W. Metcalf, Bradley S. Evans, Tomohisa Kuzuyama, nd Wilfred A. van der Donk Abstract Full Text PDF Figures Supplemental material

Mechanisms of Action: Physiological Effects

Effects of Antimicrobial Peptides on Methanogenic Archaea C. Bang, A. Schilhabel, K. Weidenbach, A. Kopp, T. Goldmann, T. Gutsmann, and R. A. Schmitz Abstract Full Text PDF Figures

Novel Antibiotics Targeting Respiratory ATP Synthesis in Gram-Positive Pathogenic Bacteria Wendy Balemans, Luc Vranckx, Nacer Lounis, Ovidiu Pop, Jérôme Guillemont, Karen Vergauwen, Selena Mol, Ron Gilissen, Magali Motte, David Lançois, Miguel De Bolle, Kristien Bonroy, Holger Lill, Koen Andries, Dirk Bald, and Anil Koul Abstract Full Text PDF Figures

Inactivation of Mycobacterium tuberculosis L,D-Transpeptidase LdtMt1 by Carbapenems and Cephalosporins Vincent Dubée, Sébastien Triboulet, Jean-Luc Mainardi, Mélanie Ethève-Quelquejeu, Laurent Gutmann, Arul Marie, Lionel Dubost, Jean-Emmanuel Hugonnet, and Michel Arthur Abstract Full Text PDF Figures

An Integrated Approach for Identification and Target Validation of Antifungal Compounds Active against Erg11p Dominic Hoepfner, Shantanu Karkare, Stephen B. Helliwell, Martin Pfeifer, Markus Trunzer, Sophie De Bonnechose, Alfred Zimmerlin, Jianshi Tao, Daryl Richie, Andreas Hofmann, Stefan Reinker, Mathias Frederiksen, N. Rao Movva, Jeffrey A. Porter, Neil S. Ryder, and Christian N. Parker Abstract Full Text PDF Figures Supplemental material

2-Alkylaminoethyl-1,1-Bisphosphonic Acids Are Potent Inhibitors of the Enzymatic Activity of Trypanosoma cruzi Squalene Synthase Carlos A. Rodrígues-Poveda, Dolores González-Pacanowska, Sergio H. Szajnman, and Juan B. Rodríguez Abstract Full Text PDF Figures

Mechanisms of Resistance

Aquaculture Journals Page: 22 of 331

Aquaculture Journals – Table of Contents

Mechanistic Assessment of DNA as an Antibacterial Target in Staphylococcus aureus Steven D. Podos, Jane A. Thanassi, and Michael J. Pucci Abstract Full Text PDF Figures

Facultative Sterol Uptake in an Ergosterol-Deficient Clinical Isolate of Candida glabrata Harboring a Missense Mutation in ERG11 and Exhibiting Cross- Resistance to Azoles and Amphotericin B Claire M. Hull, Josie E. Parker, Oliver Bader, Michael Weig, Uwe Gross, Andrew G. S. Warrilow, Diane E. Kelly, and Steven L. Kelly Abstract Full Text PDF Figures

Resistance to a Novel Antichlamydial Compound Is Mediated through Mutations in Chlamydia trachomatis secY Kelsi M. Sandoz, Steven G. Eriksen, Brendan M. Jeffrey, Robert J. Suchland, Timothy E. Putman, Dennis E. Hruby, Robert Jordan, and Daniel D. Rockey Abstract Full Text PDF Figures

Crystal Structure of the Mobile Metallo-β-Lactamase AIM-1 from Pseudomonas aeruginosa: Insights into Antibiotic Binding and the Role of Gln157 Hanna-Kirsti S. Leiros, Pardha S. Borra, Bjørn Olav Brandsdal, Kine Susann Waade Edvardsen, James Spencer, Timothy R. Walsh, and Ørjan Samuelsen Abstract Full Text PDF Figures Supplemental material

Increase of β-Lactam-Resistant Invasive Haemophilus influenzae in Sweden, 1997 to 2010 Fredrik Resman, Mikael Ristovski, Arne Forsgren, Bertil Kaijser, Göran Kronvall, Patrik Medstrand, Eva Melander, Inga Odenholt, and Kristian Riesbeck Abstract Full Text PDF Figures

Understanding the Molecular Determinants of Substrate and Inhibitor Specificities in the Carbapenemase KPC-2: Exploring the Roles of Arg220 and Glu276 Krisztina M. Papp-Wallace, Magdalena A. Taracila, Kerri M. Smith, Yan Xu, and Robert A. Bonomo Abstract Full Text PDF Figures Supplemental material

Characterization of RarA, a Novel AraC Family Multidrug Resistance Regulator in Klebsiella pneumoniae Mark Veleba, Paul G. Higgins, Gerardo Gonzalez, Harald Seifert, and Schneiders Abstract Full Text PDF Figures OPEN ACCESS

Tigecycline Resistance Can Occur Independently of the ramA Gene in Klebsiella pneumoniae Mark Veleba and Thamarai Schneiders Abstract Full Text PDF Figures OPEN ACCESS

Prevalence of blaZ Gene Types and the Inoculum Effect with Cefazolin among Bloodstream Isolates of Methicillin-Susceptible Staphylococcus aureus D. J. Livorsi, E. Crispell, S. W. Satola, E. M. Burd, R. Jerris, Y. F. Wang, and M. M. Farley Abstract Full Text PDF

Inducible and Constitutive Activation of Two Polymorphic Promoter Alleles of the Candida albicans Multidrug Efflux Pump MDR1

Aquaculture Journals Page: 23 of 331

Aquaculture Journals – Table of Contents

Christoph Sasse, Rebecca Schillig, Alexandra Reimund, Julia Merk, and Joachim Morschhäuser Abstract Full Text PDF Figures Supplemental material

In Vivo Emergence of Tigecycline Resistance in Multidrug-Resistant Klebsiella pneumoniae and Escherichia coli Teresa Spanu, Giulia De Angelis, Michela Cipriani, Barbara Pedruzzi, Tiziana D'Inzeo, Maria Adriana Cataldo, Gabriele Sganga, and Evelina Tacconelli Abstract Full Text PDF

Mutations in 23S rRNA Confer Resistance against Azithromycin in Pseudomonas aeruginosa Rasmus Lykke Marvig, Mette S. R. Søndergaard, Søren Damkiær, Niels Høiby, Helle Krogh Johansen, Søren Molin, and Lars Jelsbak Abstract Full Text PDF

Plasmid-Mediated Quinolone Resistance in Extended-Spectrum-β-Lactamase- and AmpC β-Lactamase-Producing Serratia marcescens in China Hai-Fei Yang, Jun Cheng, Li-Fen Hu, Ying Ye, and Jia-Bin Li Abstract Full Text PDF

Characterization of a Novel IMP-28 Metallo-β-Lactamase from a Spanish Klebsiella oxytoca Clinical Isolate Francisco José Pérez-Llarena, Ana Fernández, Laura Zamorano, Frédéric Kerff, Alejandro Beceiro, Belén Aracil, Emilia Cercenado, Elisenda Miro, Antonio Oliver, Jesús Oteo, Ferran Navarro, and Germán Bou Abstract Full Text PDF Figures

AbaR4-Type Resistance Island Including the blaOXA-23 Gene in Acinetobacter nosocomialis Isolates Dae Hun Kim, Ji Young Choi, Sook-In Jung, Visanu Thamlikitkul, Jae-Hoon Song, and Kwan Soo Ko Abstract Full Text PDF Supplemental material

Susceptibility

Combination Antimicrobial Susceptibility Testing of Multidrug-Resistant Stenotrophomonas maltophilia from Cystic Fibrosis Patients K. E. N. Milne and I. M. Gould Abstract Full Text PDF Figures

Harmine Is a Potent Antimalarial Targeting Hsp90 and Synergizes with Chloroquine and Artemisinin Dea Shahinas, Gregory MacMullin, Christan Benedict, Ian Crandall, and Dylan R. Pillai Abstract Full Text PDF Figures Supplemental material

Correlation between Mutations in liaFSR of Enterococcus faecium and MIC of Daptomycin: Revisiting Daptomycin Breakpoints Jose M. Munita, Diana Panesso, Lorena Diaz, Truc T. Tran, Jinnethe Reyes, Audrey Wanger, Barbara E. Murray, and Cesar A. Arias Abstract Full Text PDF Figures

In Vitro Activities of LTX-109, a Synthetic Antimicrobial Peptide, against Methicillin-Resistant, Vancomycin-Intermediate, Vancomycin-Resistant,

Aquaculture Journals Page: 24 of 331

Aquaculture Journals – Table of Contents

Daptomycin-Nonsusceptible, and Linezolid-Nonsusceptible Staphylococcus aureus Louis D. Saravolatz, Joan Pawlak, Leonard Johnson, Hector Bonilla, Louis D. Saravolatz II, Mohamad G. Fakih, Anders Fugelli, and Wenche Marie Olsen Abstract Full Text PDF

In Vitro Combination of Anidulafungin and Voriconazole against Intrinsically Azole- Susceptible and -Resistant Aspergillus spp. Virginie Planche, Sebastien Ducroz, Alexandre Alanio, Marie-Elisabeth Bougnoux, Olivier Lortholary, and Eric Dannaoui Abstract Full Text PDF Figures

Clinical and Antimicrobial Susceptibility Data of 140 Streptococcus pseudopneumoniae Isolates in France C. Laurens, A.-L. Michon, H. Marchandin, J. Bayette, M.-N. Didelot, and H. Jean-Pierre Abstract Full Text PDF Figures

Effect of Sodium Fluoride, Ampicillin, and Chlorhexidine on Streptococcus mutans Biofilm Detachment Jia Liu, Jun-Qi Ling, Kai Zhang, Li-Jun Huo, and Yang Ning Abstract Full Text PDF Figures

Analytical Procedures

An Automated Image-Based Method for Rapid Analysis of Chlamydia Infection as a Tool for Screening Antichlamydial Agents Ichie Osaka, Jeffrey M. Hills, Sarah L. Kieweg, Heather E. Shinogle, David S. Moore, and P. Scott Hefty Abstract Full Text PDF Figures Supplemental material

Influence of DNA Template Choice on Transcription and Inhibition of Escherichia coli RNA Polymerase Joerg Haupenthal, Kristina Hüsecken, Matthias Negri, Christine K. Maurer, and Rolf W. Hartmann Abstract Full Text PDF Figures Supplemental material

Antiviral Agents

Levofloxacin Inhibits Rhinovirus Infection in Primary Cultures of Human Tracheal Epithelial Cells Mutsuo Yamaya, Hidekazu Nishimura, Yukimasa Hatachi, Hiroyasu Yasuda, Xue Deng, Takahiko Sasaki, Katsumi Mizuta, Hiroshi Kubo, and Ryoichi Nagatomi Abstract Full Text PDF Figures

Maraviroc and Other HIV-1 Entry Inhibitors Exhibit a Class-Specific Redistribution Effect That Results in Increased Extracellular Viral Load Victor G. Kramer, Susan M. Schader, Maureen Oliveira, Susan P. Colby-Germinario, Daniel A. Donahue, Diane N. Singhroy, Randy Tressler, Richard D. Sloan, and Mark A. Wainberg Abstract Full Text PDF Figures

MK-5172, a Selective Inhibitor of Hepatitis C Virus NS3/4a Protease with Broad Activity across Genotypes and Resistant Variants Vincenzo Summa, Steven W. Ludmerer, John A. McCauley, Christine Fandozzi, Christine Burlein, Giuliano Claudio, Paul J. Coleman, Jillian M. DiMuzio, Marco Ferrara, Marcello Di Filippo, Adam T. Gates, Donald J. Graham, Steven Harper, Daria J. Hazuda, Carolyn McHale,

Aquaculture Journals Page: 25 of 331

Aquaculture Journals – Table of Contents

Edith Monteagudo, Vincenzo Pucci, Michael Rowley, Michael T. Rudd, Aileen Soriano, Mark W. Stahlhut, Joseph P. Vacca, David B. Olsen, Nigel J. Liverton, and Steven S. Carroll Abstract Full Text PDF Figures

Extended Protection against Phlebovirus Infection Conferred by Recombinant Adenovirus Expressing Consensus Interferon (DEF201) Brian B. Gowen, Jane Ennis, Eric J. Sefing, Min-Hui Wong, Kie-Hoon Jung, and Jeffrey D. Turner Abstract Full Text PDF Figures

Preclinical Characterization of JTK-853, a Novel Nonnucleoside Inhibitor of the Hepatitis C Virus RNA-Dependent RNA Polymerase Izuru Ando, Tsuyoshi Adachi, Naoki Ogura, Yukiyo Toyonaga, Kazuyuki Sugimoto, Hiroyuki Abe, Masafumi Kamada, and Toru Noguchi Abstract Full Text PDF Figures

HIV gp120 H375 Is Unique to HIV-1 Subtype CRF01_AE and Confers Strong Resistance to the Entry Inhibitor BMS-599793, a Candidate Microbicide Drug Susan M. Schader, Susan P. Colby-Germinario, Peter K. Quashie, Maureen Oliveira, Ruxandra-Ilinca Ibanescu, Daniela Moisi, Thibault Mespléde, and Mark A. Wainberg Abstract Full Text PDF Figures

Identification of Disubstituted Sulfonamide Compounds as Specific Inhibitors of Hepatitis B Virus Covalently Closed Circular DNA Formation Dawei Cai, Courtney Mills, Wenquan Yu, Ran Yan, Carol E. Aldrich, Jeffry R. Saputelli, William S. Mason, Xiaodong Xu, Ju-Tao Guo, Timothy M. Block, Andrea Cuconati, and Haitao Guo Abstract Full Text PDF Figures

Hyperimmune Bovine Colostrum as a Low-Cost, Large-Scale Source of Antibodies with Broad Neutralizing Activity for HIV-1 Envelope with Potential Use in Microbicides Marit Kramski, Rob J. Center, Adam K. Wheatley, Jonathan C. Jacobson, Marina R. Alexander,Grant Rawlin, and Damian F. J. Purcell Abstract Full Text PDF Figures Supplemental material

Mutations in HIV-1 gag and pol Compensate for the Loss of Viral Fitness Caused by a Highly Mutated Protease Milan Kožíšek, Sandra Henke, Klára Grantz Šašková, Graeme Brendon Jacobs, Anita Schuch, Bernd Buchholz, Viktor Müller, Hans-Georg Kräusslich, Pavlína Řezáčová, Jan Konvalinka, and Jochen Bodem Abstract Full Text PDF Figures Supplemental material

Small-Molecule Inhibitors of the LEDGF/p75 of Integrase Block HIV Replication and Modulate Integrase Multimerization Frauke Christ, Stephen Shaw, Jonas Demeulemeester, Belete A. Desimmie, Arnaud Marchand, Scott Butler, Wim Smets, Patrick Chaltin, Mike Westby, Zeger Debyser, and Chris Pickford Abstract Full Text PDF Figures Supplemental material

Therapeutic Activity of Intramuscular Peramivir in Mice Infected with a Recombinant Influenza A/WSN/33 (H1N1) Virus Containing the H275Y Neuraminidase Mutation Yacine Abed, Andrés Pizzorno, and Guy Boivin Abstract Full Text PDF Figures

Aquaculture Journals Page: 26 of 331

Aquaculture Journals – Table of Contents

Saquinavir Inhibits Early Events Associated with Establishment of HIV-1 Infection: Potential Role for Protease Inhibitors in Prevention Martha Stefanidou, Carolina Herrera, Naomi Armanasco, and Robin J. Shattock Abstract Full Text PDF FiguresSupplemental material

Panel of Prototypical Recombinant Infectious Molecular Clones Resistant to Nevirapine, Efavirenz, Etravirine, and Rilpivirine Maya Balamane, Vici Varghese, George L. Melikian, W. Jeffrey Fessel, David A. Katzenstein, and Robert W. Shafer Abstract Full TextPDF Figures Supplemental material OPEN ACCESS

First-in-Human Study of the Pharmacokinetics and Antiviral Activity of IDX375, a Novel Nonnucleoside Hepatitis C Virus Polymerase Inhibitor J. de Bruijne, J. van de Wetering de Rooij, A. A. van Vliet, X. J. Zhou,M. F. Temam, J. Molles, J. Chen, K. Pietropaolo, J. Z. Sullivan-Bólyai, D. Mayers, and H. W. Reesink Abstract Full Text PDF Figures OPEN ACCESS

Epidemiology and Surveillance

Variations of AbaR4-Type Resistance Islands in Acinetobacter baumannii Isolates from South Korea Dae Hun Kim, Young Kyoung Park, and Kwan Soo Ko Abstract Full Text PDF Figures

Experimental Therapeutics

Amixicile, a Novel Inhibitor of Pyruvate: Ferredoxin , Shows Efficacy against Clostridium difficile in a Mouse Infection Model Cirle A. Warren, Edward van Opstal, T. Eric Ballard, Andrew Kennedy, Xia Wang, Mary Riggins, Igor Olekhnovich, Michelle Warthan, Glynis L. Kolling, Richard L. Guerrant, Timothy L. Macdonald, and Paul S. Hoffman Abstract Full Text PDF Figures Supplemental material

Pseudomonas aeruginosa Exopolysaccharide Psl Promotes Resistance to the Biofilm Inhibitor Polysorbate 80 Michael E. Zegans, Daniel Wozniak, Edward Griffin, Christine M. Toutain-Kidd, John H. Hammond, Andrew Garfoot, and Joseph S. Lam Abstract Full Text PDF Figures

Antitubercular Activity of Disulfiram, an Antialcoholism Drug, against Multidrug- and Extensively Drug-Resistant Mycobacterium tuberculosis Isolates Yasuhiro Horita, Takemasa Takii, Tetsuya Yagi, Kenji Ogawa, Nagatoshi Fujiwara, Emi Inagaki, Laurent Kremer, Yasuo Sato, Ryuji Kuroishi, YooSa Lee, Toshiaki Makino, Hajime Mizukami, Tomohiro Hasegawa, Ryuji Yamamoto, and Kikuo Onozaki Abstract Full Text PDF Figures Supplemental material

Identification of (+)-Erythro-Mefloquine as an Active Enantiomer with Greater Efficacy than Mefloquine against Mycobacterium avium Infection in Mice Luiz E. Bermudez, Clark B. Inderlied, Peter Kolonoski, Christopher B. Chee, Priscilla Aralar, Mary Petrofsky, Toufan Parman, Carol E. Green, Anita H. Lewin, William Y. Ellis, and Lowell S. Young Abstract Full Text PDF Figures

Aquaculture Journals Page: 27 of 331

Aquaculture Journals – Table of Contents

Role of Innate Immune Receptors in Paradoxical Caspofungin Activity In Vivo in Preclinical Aspergillosis Silvia Moretti, Silvia Bozza, Carmen D'Angelo, Andrea Casagrande, Maria Agnese Della Fazia, Lucia Pitzurra, Luigina Romani, and Franco Aversa Abstract Full Text PDF Figures

Adjunctive Daptomycin Attenuates Brain Damage and Hearing Loss More Efficiently than Rifampin in Infant Rat Pneumococcal Meningitis Denis Grandgirard, Melchior Burri, Philipp Agyeman, and Stephen L. Leib Abstract Full Text PDF Figures

Dose-Ranging Comparison of Rifampin and Rifapentine in Two Pathologically Distinct Murine Models of Tuberculosis Ian M. Rosenthal, Rokeya Tasneen, Charles A. Peloquin, Ming Zhang, Deepak Almeida, Khisimuzi E. Mdluli, Petros C. Karakousis, Jacques H. Grosset, and Eric L. Nuermberger Abstract Full Text PDF Figures Supplemental material

Infection Dynamics and Response to Chemotherapy in a Rabbit Model of Tuberculosis using [18F]2-Fluoro-Deoxy-D-Glucose Positron Emission Tomography and Computed Tomography Laura E. Via, Dan Schimel, Danielle M. Weiner, Veronique Dartois, Emmanuel Dayao, Ying Cai, Young-Soon Yoon, Matthew R. Dreher, Robin J. Kastenmayer, Charles M. Laymon, J. Eoin Carny, JoAnne L. Flynn, Peter Herscovitch, and Clifton E. Barry III Abstract Full Text PDF Figures Supplemental material OPEN ACCESS

Comparative Efficacies of Human Simulated Exposures of Tedizolid and Linezolid against Staphylococcus aureus in the Murine Thigh Infection Model R. A. Keel, P. R. Tessier, J. L. Crandon, and D. P. Nicolau Abstract Full Text PDF Figures

Vancomycin Tolerance in Methicillin-Resistant Staphylococcus aureus: Influence of Vancomycin, Daptomycin, and Telavancin on Differential Resistance Gene Expression Warren E. Rose, Michael Fallon, John J. M. Moran, and Joshua P. Vanderloo Abstract Full Text PDF Figures

Experimental Central Nervous System Aspergillosis Therapy: Efficacy, Drug Levels and Localization, Immunohistopathology, and Toxicity Karl V. Clemons, Julie A. Schwartz, and David A. Stevens Abstract Full Text PDF Figures

Efficacy of LFF571 in a Hamster Model of Clostridium difficile Infection Anna Trzasko, Jennifer A. Leeds, Jens Praestgaard, Matthew J. LaMarche, and David McKenney Abstract Full Text PDF Figures

Mechanism of Action of and Mechanism of Reduced Susceptibility to the Novel Anti-Clostridium difficile Compound LFF571 J. A. Leeds, M. Sachdeva, S. Mullin, J. Dzink-Fox, and M. J. LaMarche Abstract Full Text PDF Figures

In Vitro Analyses of Ethanol Activity against Candida albicans Biofilms Hallie S. Rane, Stella M. Bernardo, Carla J. Walraven, and Samuel A. Lee Abstract Full Text PDF Figures

Clinical Therapeutics

Aquaculture Journals Page: 28 of 331

Aquaculture Journals – Table of Contents

Efficacy of Rifaximin Vaginal Tablets in Treatment of Bacterial Vaginosis: a Molecular Characterization of the Vaginal Microbiota Federica Cruciani, Patrizia Brigidi, Fiorella Calanni, Vittoria Lauro, Raffaella Tacchi, Gilbert Donders, Klaus Peters, Secondo Guaschino, and Beatrice Vitali Abstract Full Text PDF Figures Supplemental material

Impact of Antibiotic MIC on Infection Outcome in Patients with Susceptible Gram-Negative Bacteria: a Systematic Review and Meta-Analysis Matthew E. Falagas, Giannoula S. Tansarli, Petros I. Rafailidis, Anastasios Kapaskelis, and Konstantinos Z. Vardakas Abstract Full Text PDF Figures

Inhibition of Biofilm Formation by Esomeprazole in Pseudomonas aeruginosa and Staphylococcus aureus Vandana Singh, Vaneet Arora, M. Jahangir Alam, and Kevin W. Garey Abstract Full Text PDF Figures

Plasma Concentrations of Posaconazole Administered via Nasogastric Tube in Patients in a Surgical Intensive Care Unit Dominic Störzinger, Stephan Borghorst, Stefan Hofer, Cornelius J. Busch, Christoph Lichtenstern, Georg Hempel, Markus A. Weigand, and Torsten Hoppe-Tichy Abstract Full Text PDF Figures

High Risk of QT Interval Prolongation and Torsades de Pointes Associated with Intravenous Quinidine Used for Treatment of Resistant Malaria or Babesiosis Heather A. Wroblewski, Richard J. Kovacs, Joanna R. Kingery, Brian R. Overholser, and James E. Tisdale Abstract Full Text PDF Figures

High-Dose Daptomycin plus Fosfomycin Is Safe and Effective in Treating Methicillin-Susceptible and Methicillin-Resistant Staphylococcus aureus Endocarditis José M. Miró, José M. Entenza, Ana del Río, Maria Velasco, Ximena Castañeda, Cristina Garcia de la Mària, Marlyse Giddey, Yolanda Armero, Juan M. Pericàs, Carlos Cervera, Carlos A. Mestres, Manuel Almela, Carlos Falces, Francesc Marco, Philippe Moreillon, and Asuncion Moreno Abstract Full Text PDF Figures

Pharmacology

Pharmacokinetics of Tulathromycin in Healthy and Neutropenic Mice Challenged Intranasally with Lipopolysaccharide from Escherichia coli N. Villarino, S. A. Brown, and T. Martín-Jiménez Abstract Full Text PDF Figures

Population Pharmacokinetics of Extended-Infusion Piperacillin-Tazobactam in Hospitalized Patients with Nosocomial Infections T. W. Felton, W. W. Hope, B. M. Lomaestro, J. M. Butterfield, A. L. Kwa, G. L. Drusano, and T. P. Lodise Abstract Full Text PDF Figures

Pharmacodynamics of Itraconazole against Aspergillus fumigatus in an In Vitro Model of the Human Alveolus: Perspectives on the Treatment of Triazole- Resistant Infection and Utility of Airway Administration

Aquaculture Journals Page: 29 of 331

Aquaculture Journals – Table of Contents

Zaid Al-Nakeeb, Ajay Sudan, Adam R. Jeans, Lea Gregson, Joanne Goodwin, Peter A. Warn, Timothy W. Felton, Susan J. Howard, and William W. Hope Abstract Full Text PDF Figures

Single-Dose Phase I Study To Evaluate the Pharmacokinetics of Posaconazole in New Tablet and Capsule Formulations Relative to Oral Suspension Gopal Krishna, Lei Ma, Monika Martinho, and Edward O'Mara Abstract Full Text PDF Figures OPEN ACCESS

Application of a Loading Dose of Colistin Methanesulfonate in Critically Ill Patients: Population Pharmacokinetics, Protein Binding, and Prediction of Bacterial Kill Ami F. Mohamed, Ilias Karaiskos, Diamantis Plachouras, Matti Karvanen, Konstantinos Pontikis, Britt Jansson, Evangelos Papadomichelakis, Anastasia Antoniadou, Helen Giamarellou, Apostolos Armaganidis, Otto Cars, and Lena E. Friberg Abstract Full Text PDF Figures

Effect of Rifampin and Rifabutin on the Pharmacokinetics of Lersivirine and Effect of Lersivirine on the Pharmacokinetics of Rifabutin and 25-O-Desacetyl- Rifabutin in Healthy Subjects Manoli Vourvahis, John Davis, Rong Wang, Gary Layton, Heng Wee Choo, Chew-Lan Chong, and Margaret Tawadrous Abstract Full Text PDF Figures

Colistin Methanesulfonate Roberto Imberti, Maria Cusato, Giovanni Accetta, Valeria Marinò, Francesco Procaccio, Alfredo Del Gaudio, Giorgio A. Iotti, and Mario Regazzi Abstract Full Text PDF Figures

Moxifloxacin Population Pharmacokinetics in Patients with Pulmonary Tuberculosis and the Effect of Intermittent High-Dose Rifapentine Simbarashe P. Zvada, Paolo Denti, Hennie Geldenhuys, Sandra Meredith, Danelle van As, Mark Hatherill, Willem Hanekom, Lubbe Wiesner, Ulrika S. H. Simonsson, Amina Jindani, Thomas Harrison, and Helen M. McIlleron AbstractFull Text PDF Figures

A Model for Evaluating Topical Antimicrobial Efficacy against Methicillin- Resistant Staphylococcus aureus Biofilms in Superficial Murine Wounds Eric D. Roche, Paul J. Renick, Shannon P. Tetens, and Dennis L. Carson Abstract Full Text PDF Figures

Letters to the Editor

Pharmacokinetics of Caspofungin in Two Patients with Burn Injuries V. Jullien, B. Blanchet, M. Benyamina, M. Tod, and C. Vinsonneau Full Text PDF

Anidulafungin for Candida glabrata Infective Endocarditis F. G. De Rosa, A. D'Avolio, S. Corcione, L. Baietto, S. Raviolo, P. Centofanti, D. Pasero, M. Rinaldi, and G. Di Perri Full Text PDF Figures

High Frequency of IMP-6 among Clinical Isolates of Metallo-β-Lactamase- Producing Escherichia coli in Japan

Aquaculture Journals Page: 30 of 331

Aquaculture Journals – Table of Contents

Hisakazu Yano, Miho Ogawa, Shiro Endo, Risako Kakuta, Hajime Kanamori, Shinya Inomata, Noriomi Ishibashi, Tetsuji Aoyagi, Masumitsu Hatta, Yoshiaki Gu, Mitsuhiro Yamada, Koichi Tokuda, Hiroyuki Kunishima, Miho Kitagawa, Yoichi Hirakata, and Mitsuo Kaku Full Text PDF

CMY-2-Producing Escherichia coli in the Nose of Pigs Andrea Endimiani, Markus Hilty, and Vincent Perreten Full Text PDF

Duration of Stool Colonization in Healthy Medical Students with Extended- Spectrum-β-Lactamase-Producing Escherichia coli Bin Li, Yang Zhong, Xiao-chun Fu, Yi-hui Qiu, Si-ying Wang, A-juan Yang, and Xin-hong Huang Full Text PDF Figures

Successful Target Attainment of Telavancin at Elevated MICs: Fact or Fiction? Andras Farkas Full Text PDF

Reply to “Successful Target Attainment of Telavancin at Elevated MICs: Fact or Fiction?” Thomas P. Lodise, Jill Butterfield, and Steven Barriere Full Text PDF

Clonal Complex 258, the Most Frequently Found Multilocus Sequence Type Complex in KPC-2-Producing Klebsiella pneumoniae Isolated in Brazilian Hospitals Adriana G. Nicoletti, Lorena C. C. Fehlberg, Renata C. Picão, Antônia de O. Machado, and Ana C. Gales Full Text PDF

Reply to “Clonal Complex 258, the Most Frequently Found Multilocus Sequence Type Complex in KPC-2-Producing Klebsiella pneumoniae Isolated in Brazilian Hospitals” Leonardo Neves Andrade, Ana Lucia da Costa Darini, Tania Curiao, Fernando Baquero, Rafael Cantón, and Teresa M. Coque Full Text PDF

A Novel Gene Cassette Potentially Conferring Resistance to Aminoglycosides Sally R. Partridge and Guy Tsafnat Full Text PDF Figures

Previous – Top – Next

VOLUME 56, PART 9, September 2012 Website

Research articles

Minireview

Development of Anti-Infectives Using Phage Display: Biological Agents against Bacteria, Viruses, and Parasites Johnny X. Huang, Sharon L. Bishop-Hurley, and Matthew A. Cooper

Aquaculture Journals Page: 31 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

Chemistry; Biosynthesis

5S Clavam Biosynthesis Is Controlled by an Atypical Two-Component Regulatory System in Streptomyces clavuligerus Thomas Kwong, Nathan J. Zelyas, Hui Cai, Kapil Tahlan, Annie Wong, and Susan E. Jensen Abstract Full Text PDF Figures Supplemental material

Mechanisms of Action: Physiological Effects

Interaction with II Induces Conformational Changes in Bovicin HC5 Structure Aline Dias Paiva, Nicole Irving, Eefjan Breukink, and Hilário Cuquetto Mantovani Abstract Full Text PDF Figures

Rapid Redistribution of Phosphatidylinositol-(4,5)-Bisphosphate and Septins during the Candida albicans Response to Caspofungin Hassan Badrane, M. Hong Nguyen, Jill R. Blankenship, Shaoji Cheng, Binghua Hao, Aaron P. Mitchell, and Cornelius J. Clancy Abstract Full Text PDF Figures Supplemental material

Optimal Control Strategies for Disinfection of Bacterial Populations with Persister and Susceptible Dynamics N. G. Cogan, Jason Brown, Kyle Darres, and Katherine Petty Abstract Full Text PDF Figures

Antibacterial Properties of an Oligo-Acyl-Lysyl Hexamer Targeting Gram- Negative Species Fadia Zaknoon, Keren Goldberg, Hadar Sarig, Raquel F. Epand, Richard M. Epand, and Amram Mor Abstract Full TextPDF Figures Supplemental material

A Whole-Cell Phenotypic Screening Platform for Identifying Methylerythritol Phosphate Pathway-Selective Inhibitors as Novel Antibacterial Agents Charles A. Testa and L. Jeffrey Johnson Abstract Full Text PDF Figures

In Vitro Comparison of Nitrofurazone- and Silver Alloy-Coated Foley Catheters for Contact-Dependent and Diffusible Inhibition of Urinary Tract Infection- Associated Microorganisms James R. Johnson, Brian Johnston, and Michael A. Kuskowski Abstract Full Text PDF Figures

Mechanisms of Resistance

Staphylococcus aureus VRSA-11B Is a Constitutive Vancomycin-Resistant Mutant of Vancomycin-Dependent VRSA-11A Bruno Périchon and Patrice Courvalin Abstract Full Text PDF Figures

Characterization of a Streptococcus suis tet(O/W/32/O)-Carrying Element Transferable to Major Streptococcal Pathogens Claudio Palmieri, Gloria Magi, Marina Mingoia, Patrizia Bagnarelli, Sandro Ripa, Pietro E. Varaldo, and Bruna Facinelli Abstract Full Text PDF Figures

Aquaculture Journals Page: 32 of 331

Aquaculture Journals – Table of Contents

Persistence of Transferable Extended-Spectrum-β-Lactamase Resistance in the Absence of Antibiotic Pressure Jennifer L. Cottell, Mark A. Webber, and Laura J. V. Piddock Abstract Full Text PDF Figures

New MLSB Resistance Gene erm(43) in Staphylococcus lentus Sybille Schwendener and Vincent Perreten Abstract Full Text PDF Figures

Role of ISKpn7 and Deletions in blaKPC Gene Expression Thierry Naas, Gaelle Cuzon, Ha-Vy Truong, and Patrice Nordmann Abstract Full Text PDF Figures

Prevalence and Molecular Characterization of Extended-Spectrum-β- Lactamase-Producing Enterobacteriaceae in a Pediatric Patient Population Lakshmi Chandramohan and Paula A. Revell Abstract Full Text PDF Figures

Pan-β-Lactam Resistance Development in Pseudomonas aeruginosa Clinical Strains: Molecular Mechanisms, Penicillin-Binding Protein Profiles, and Binding Affinities Bartolomé Moyá, Alejandro Beceiro, Gabriel Cabot, Carlos Juan, Laura Zamorano, Sebastián Alberti, and Antonio Oliver Abstract Full Text PDF Figures

The Antibiotic Resistance Arrow of Time: Efflux Pump Induction Is a General First Step in the Evolution of Mycobacterial Drug Resistance M. Schmalstieg, Shashikant Srivastava, Serkan Belkaya, Devyani Deshpande, Claudia Meek, Richard Leff, Nicolai S. C. van Oers, and Tawanda Gumbo Abstract Full Text PDF Figures

Emergence of Metallo-β-Lactamase GIM-1 in a Clinical Isolate of Serratia marcescens Heime Rieber, Andre Frontzek, and Pfeifer Abstract Full Text PDF Figures

Novel Mechanism for Fluoroquinolone Resistance in Acinetobacter baumannii Sunil D. Saroj, Katy M. Clemmer, Robert A. Bonomo, Philip N. Rather Abstract Full Text PDF Figures

Molecular Organization of Small Plasmids Bearing blaTEM-1 and Conferring Resistance to β-Lactams in Haemophilus influenzae Annette Søndergaard, Alvaro San Millan, Alfonso Santos-Lopez, Signe M. Nielsen, Bruno Gonzalez-Zorn, and Niels Nørskov-Lauritsen Abstract Full Text PDF Figures

Correlation between Fecal Concentrations of Ciprofloxacin and Fecal Counts of Resistant Enterobacteriaceae in Piglets Treated with Ciprofloxacin: toward New Means To Control the Spread of Resistance? Thu Thuy Nguyen, Elisabeth Chachaty, Clarisse Huy, Carole Cambier, Jean de Gunzburg, France Mentré, and Antoine Andremont Abstract Full Text PDF Figures

Aquaculture Journals Page: 33 of 331

Aquaculture Journals – Table of Contents

Mature Pseudomonas aeruginosa Biofilms Prevail Compared to Young Biofilms in the Presence of Ceftazidime Laura L. Bowler, George G. Zhanel, T. Blake Ball, and Laura L. Saward Abstract Full Text PDF Figures

Susceptibility

Anti-Helicobacter pylori Potential of Artemisinin and Its Derivatives Suchandra Goswami, Rajendra S. Bhakuni, Annalakshmi Chinniah, Anirban Pal, Sudip K. Kar, and Pratap K. Das Abstract Full Text PDF Figures

Impact of Penicillin Nonsusceptibility on Clinical Outcomes of Patients with Nonmeningeal Streptococcus pneumoniae Bacteremia in the Era of the 2008 Clinical and Laboratory Standards Institute Penicillin Breakpoints Seong-Ho Choi, Jin-Won Chung, Heungsup Sung, Mi-Na Kim, Sung-Han Kim, Sang-Oh Lee, Yang Soo Kim, Jun Hee Woo,and Sang-Ho Choi Abstract Full Text PDF

Activity of Ceftaroline-Avibactam Tested against Gram-Negative Organism Populations, including Strains Expressing One or More β-Lactamases and Methicillin-Resistant Staphylococcus aureus Carrying Various Staphylococcal Cassette Chromosome mec Types Mariana Castanheira, Helio S. Sader, David J. Farrell, Rodrigo E. Mendes, and Ronald N. Jones Abstract Full Text PDF

In Vitro Synergy of Colistin Combinations against Colistin-Resistant Acinetobacter baumannii, Pseudomonas aeruginosa, and Klebsiella pneumoniae Isolates Céline Vidaillac, Lothaire Benichou, and Raphaël E. Duval Abstract Full Text PDF Figures

The Presence of an FKS Mutation Rather than MIC Is an Independent Risk Factor for Failure of Echinocandin Therapy among Patients with Invasive Candidiasis Due to Candida glabrata Ryan K. Shields, M. Hong Nguyen, Ellen G. Press, Andrea L. Kwa, Shaoji Cheng, Chen Du, and Cornelius J. Clancy Abstract Full Text PDF Figures

Correlation between Triazole Treatment History and Susceptibility in Clinically Isolated Aspergillus fumigatus Masato Tashiro, Koichi Izumikawa, Katsuji Hirano, Shotaro Ide, Tomo Mihara, Naoki Hosogaya, Takahiro Takazono, Yoshitomo Morinaga, Shigeki Nakamura, Shintaro Kurihara, Yoshifumi Imamura, Taiga Miyazaki, Tomoya Nishino, Misuzu Tsukamoto, Hiroshi Kakeya, Yoshihiro Yamamoto, Katsunori Yanagihara, Akira Yasuoka, Takayoshi Tashiro, and Shigeru Kohno Abstract Full Text PDF Figures

Role of Oxidative Stress in Persister Tolerance Yanxia Wu, Marin Vulić, Iris Keren, and Kim Lewis Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 34 of 331

Aquaculture Journals – Table of Contents

Molecular Identification and In Vitro Response to Antifungal Drugs of Clinical Isolates of Exserohilum Keith Cássia da Cunha, Deanna A. Sutton, Josepa Gené, Javier Capilla, Josep Cano, and Josep Guarro Abstract Full Text PDF

Bacterial Adhesion Forces with Substratum Surfaces and the Susceptibility of Biofilms to Antibiotics Agnieszka K. Muszanska, M. Reza Nejadnik, Yun Chen, Edwin R. van den Heuvel, Henk J. Busscher, Henny C. van der Mei, and Willem Norde Abstract Full Text PDF Figures

Antiviral Agents

Efavirenz Pharmacokinetics in Cerebrospinal Fluid and Plasma over a 24-Hour Dosing Interval Aylin Yilmaz, Victoria Watson, Laura Dickinson, and David Back Abstract Full Text PDF Figures

Bifunctional CD4–DC-SIGN Fusion Proteins Demonstrate Enhanced Avidity to gp120 and Inhibit HIV-1 Infection and Dissemination Tao Du, Kai Hu, Jun Yang, Jing Jin, Chang Li, Daniel Stieh, George E. Griffin, Robin J. Shattock, and Qinxue Hu Abstract Full Text PDF Figures Supplemental material

TMC647055, a Potent Nonnucleoside Hepatitis C Virus NS5B Polymerase Inhibitor with Cross-Genotypic Coverage Benoit Devogelaere, Jan Martin Berke, Leen Vijgen, Pascale Dehertogh, Els Fransen, Erna Cleiren, Liesbet van der Helm, Origène Nyanguile, Abdellah Tahri, Katie Amssoms, Oliver Lenz, Maxwell D. Cummings, Reginald F. Clayton, Sandrine Vendeville, Pierre Raboisson, Kenneth A. Simmen, Gregory C. Fanning, and Tse-I Lin Abstract Full Text PDF Figures Supplemental material

Response of Simian Immunodeficiency Virus to the Novel Nucleoside Reverse Transcriptase Inhibitor 4′-Ethynyl-2-Fluoro-2′-Deoxyadenosine In Vitro and In Vivo Michael Murphey-Corb, Premeela Rajakumar, Heather Michael, Julia Nyaundi, Peter J. Didier, Aaron B. Reeve, Hiroaki Mitsuya, Stefan G. Sarafianos, and Michael A. Parniak Abstract Full Text PDF Figures

Severe Acute Respiratory Syndrome Coronavirus Replication Inhibitor That Interferes with the Nucleic Acid Unwinding of the Viral Helicase Adeyemi O. Adedeji, Kamalendra Singh, Nicholas E. Calcaterra, Marta L. DeDiego, Luis Enjuanes, Susan Weiss, and Stefan G. Sarafianos Abstract Full Text PDF Figures

Safety, Tolerability, and Pharmacokinetics of Intravenous Oseltamivir: Single- and Multiple-Dose Phase I Studies with Healthy Volunteers Barbara J. Brennan, Brian Davies, Georgina Cirrincione-Dall, Peter N. Morcos, Anna Beryozkina, Colombe Chappey, Pau Aceves Baldó, Sian Lennon-Chrimes, and Craig R. Rayner Abstract Full Text PDF Figures

Fluoxetine Is a Potent Inhibitor of Coxsackievirus Replication Jun Zuo, Kevin K. Quinn, Steve Kye, Paige Cooper, Robert Damoiseaux, and Paul Krogstad

Aquaculture Journals Page: 35 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

Human Cytomegalovirus Inhibition by Cardiac Glycosides: Evidence for Involvement of the hERG Gene Arun Kapoor, Hongyi Cai, Michael Forman, Ran He, Meir Shamay, and Ravit Arav-Boger Abstract Full Text PDF Figures Supplemental material

Safety and Pharmacokinetics of the Anti-Orthopoxvirus Compound ST-246 following a Single Daily Oral Dose for 14 Days in Human Volunteers Jarasvech Chinsangaram, Kady M. Honeychurch, Shanthakumar R. Tyavanagimatt, Janet M. Leeds, Tove' C. Bolken, Kevin F. Jones, Robert Jordan, Thomas Marbury, Jon Ruckle, Denis Mee-Lee, Eric Ross, Israel Lichtenstein, Margaret Pickens, Michael Corrado, Jean M. Clarke, Annie M. Frimm, and Dennis E. Hruby Abstract Full Text PDF Figures

Compared to Subcutaneous Tenofovir, Oral Tenofovir Disoproxyl Fumarate Administration Preferentially Concentrates the Drug into Gut-Associated Lymphoid Cells in Simian Immunodeficiency Virus-Infected Macaques Koen K. A. Van Rompay, Darius Babusis, Zachary Abbott, Yongzhi Geng, Kartika Jayashankar, Jeffrey A. Johnson, Jonathan Lipscomb, Walid Heneine, Kristina Abel, and Adrian S. Ray Abstract Full Text PDF Figures

Epidemiology and Surveillance

Molecular Epidemiology of Staphylococcus epidermidis Clinical Isolates from U.S. Hospitals Rodrigo E. Mendes, Lalitagauri M. Deshpande, Andrew J. Costello, and David J. Farrell Abstract Full Text PDF Figures

Investigation of Metronidazole Use during Pregnancy and Adverse Birth Outcomes Catherine A. Koss, Dana C. Baras, Sandra D. Lane, Richard Aubry, Michele Marcus, Lauri E. Markowitz, and Emilia H. Koumans Abstract Full Text PDF

Azole Preexposure Affects the Aspergillus fumigatus Population in Patients Alexandre Alanio, Odile Cabaret, Emilie Sitterlé, Jean-Marc Costa, Sylvain Brisse, Catherine Cordonnier, and Stéphane Bretagne Abstract Full Text PDF

Serotype and Clonal Evolution of Penicillin-Nonsusceptible Invasive Streptococcus pneumoniae in the 7-Valent Pneumococcal Conjugate Vaccine Era in Italy Giovanni Gherardi, Fabio D'Ambrosio, Daniela Visaggio, Giordano Dicuonzo, Maria Del Grosso, and Annalisa Pantosti Abstract Full Text PDF Figures

Experimental Therapeutics

In Vitro Activity and Microbiological Efficacy of Tedizolid (TR-700) against Gram- Positive Clinical Isolates from a Phase 2 Study of Oral Tedizolid Phosphate (TR- 701) in Patients with Complicated Skin and Skin Structure Infections Philippe Prokocimer, Paul Bien, Carisa DeAnda, Chris M. Pillar, and Ken Bartizal Abstract Full Text PDF Figures OPEN ACCESS

Aquaculture Journals Page: 36 of 331

Aquaculture Journals – Table of Contents

Amino Acid-Derived 1,2-Benzisothiazolinone Derivatives as Novel Small- Molecule Antifungal Inhibitors: Identification of Potential Genetic Targets Deepu Alex, Francoise Gay-Andrieu, Jared May, Linta Thampi, Dengfeng Dou, Aileen Mooney, William Groutas, and Richard Calderone Abstract Full Text PDF Figures Supplemental material

Broadening the Spectrum of β-Lactam Antibiotics through Inhibition of Signal Peptidase Type I Alex G. Therien, Joann L. Huber, Kenneth E. Wilson, Patrick Beaulieu, Alexandre Caron, David Claveau, Kathleen Deschamps, Robert G. K. Donald, Andrew M. Galgoci, Michel Gallant, Xin Gu, Nancy J. Kevin, Josiane Lafleur, Penny S. Leavitt, Christian Lebeau-Jacob, Suzy S. Lee, Molly M. Lin, Anna A. Michels, Aimie M. Ogawa, Ronald E. Painter, Craig A. Parish, Young-Whan Park, Liliana Benton-Perdomo, Mihai Petcu, John W. Phillips, Mary Ann Powles, Kathryn I. Skorey, John Tam, Christopher M. Tan, Katherine Young, Simon Wong, Sherman T. Waddell, and Lynn Miesel Abstract Full Text PDF Figures Supplemental material

Novel 4-Aminoquinoline Analogs Highly Active against the Blood and Sexual Stages of Plasmodium In Vivo and In Vitro Fabián E. Sáenz, Tina Mutka, Kenneth Udenze, Ayoade M. J. Oduola, and Dennis E. Kyle Abstract Full Text PDF Figures

Activity of Tedizolid Phosphate (TR-701) in Murine Models of Infection with Penicillin-Resistant and Penicillin-Sensitive Streptococcus pneumoniae Sunghak Choi, Weonbin Im, and Ken Bartizal Abstract Full Text PDF Figures Reprints and Permissions OPEN ACCESS

Combinatorial Small-Molecule Therapy Prevents Uropathogenic Escherichia coli Catheter-Associated Urinary Tract Infections in Mice Pascale S. Guiton, Corinne K. Cusumano, Kimberly A. Kline, Karen W. Dodson, Zhenfu Han, James W. Janetka, Jeffrey P. Henderson, Michael G. Caparon, and Scott J. Hultgren Abstract Full Text PDF Figures Supplemental material

MBX-500, a Hybrid Antibiotic with In Vitro and In Vivo Efficacy against Toxigenic Clostridium difficile Michelle M. Butler, Dean L. Shinabarger, Diane M. Citron, Ciarán P. Kelly, Sofya Dvoskin, George E. Wright, Hanping Feng, Saul Tzipori, and Terry L. Bowlin Abstract Full Text PDF Figures

Characterization of a Conjugate between Rose Bengal and Chitosan for Targeted Antibiofilm and Tissue Stabilization Effects as a Potential Treatment of Infected Dentin Annie Shrestha, Michael R. Hamblin, and Anil Kishen Abstract Full Text PDF Figures

Pharmacological Characterization, Structural Studies, and In Vivo Activities of Anti-Chagas Disease Lead Compounds Derived from Tipifarnib Frederick S. Buckner, Maria Terezinha Bahia, Praveen Kumar Suryadevara, Karen L. White, David M. Shackleford, Naveen Kumar Chennamaneni, Matthew A. Hulverson, Joy U. Laydbak, Eric Chatelain, Ivan Scandale, Christophe L. M. J. Verlinde, Susan A. Charman, Galina I. Lepesheva, and Michael H. Gelb Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 37 of 331

Aquaculture Journals – Table of Contents

Consequences of Noncompliance for Therapy Efficacy and Emergence of Resistance in Murine Tuberculosis Caused by the Beijing Genotype of Mycobacterium tuberculosis Jurriaan E. M. de Steenwinkel, Marian T. ten Kate, Gerjo J. de Knegt, Henri A. Verbrugh, Rob E. Aarnoutse, Martin J. Boeree, Michael A. den Bakker, Dick van Soolingen, and Irma A. J. M. Bakker-Woudenberg Abstract Full Text PDF Figures Supplemental material

Clinical Therapeutics

Influence of Multidrug Resistance and Appropriate Empirical Therapy on the 30- Day Mortality Rate of Pseudomonas aeruginosa Bacteremia Laura Morata, Nazaret Cobos-Trigueros, José A. Martínez, Álex Soriano, Manel Almela, Francesc Marco, Holguer Sterzik, Raquel Núñez, Cristina Hernández, and José Mensa Abstract Full Text PDF

Evaluation of Clinical Outcomes in Patients with Bloodstream Infections Due to Gram-Negative Bacteria According to Carbapenem MIC Stratification John S. Esterly, Jamie Wagner, Milena M. McLaughlin, Michael J. Postelnick, Chao Qi, and Marc H. Scheetz Abstract Full Text PDF Figures

Pharmacology

Characterization of Polymyxin B-Induced Nephrotoxicity: Implications for Dosing Regimen Design Kamilia Abdelraouf, Kirk H. Braggs, Taijun Yin, Luan D. Truong, Ming Hu, and Vincent H. Tam Abstract Full Text PDF Figures

Effect of Linezolid on the 50% Lethal Dose and 50% Protective Dose in Treatment of Infections by Gram-Negative Pathogens in Naive and Immunosuppressed Mice and on the Efficacy of Ciprofloxacin in an Acute Murine Model of Septicemia Andrea Marra, Lucinda Lamb, Ivette Medina, David George, Glenn Gibson, Joel Hardink, Jady Rugg, Jeffrey Van Deusen, and John P. O'Donnell Abstract Full Text PDF Figures

Short versus Long Infusion of Meropenem in Very-Low-Birth-Weight Neonates Helgi Padari, Tuuli Metsvaht, Lenne-Triin Kõrgvee, Eva Germovsek, Mari-Liis Ilmoja, Karin Kipper, Koit Herodes, Joseph F. Standing, Kersti Oselin, and Irja Lutsar Abstract Full Text PDF Figures

Multicenter Study of Voriconazole Pharmacokinetics and Therapeutic Drug Monitoring Michael J. Dolton, John E. Ray, Sharon C.-A. Chen, Kingsley Ng, Lisa G. Pont,and Andrew J. McLachlan Abstract Full Text PDF Figures

Population Pharmacokinetics of Palivizumab, a Humanized Anti-Respiratory Syncytial Virus Monoclonal Antibody, in Adults and Children Gabriel J. Robbie, Liang Zhao, John Mondick, Genevieve Losonsky, and Lorin K. Roskos Abstract Full Text PDF Figures OPEN ACCESS

Letters to the Editor

Aquaculture Journals Page: 38 of 331

Aquaculture Journals – Table of Contents

Association of Extended-Spectrum β-Lactamase VEB-5 and 16S rRNA Methyltransferase ArmA in Salmonella enterica from the United Kingdom Laura Hidalgo, Katie L. Hopkins, David W. Wareham, Belen Gutierrez, and Bruno González- Zorn Full Text PDF Figures

Serotype Distribution and Antimicrobial Resistance of Invasive Pneumococcal Disease Strains in the Comunidad Valenciana, Spain, during the Winter of 2009- 2010: Low PCV7 Coverage and High Levofloxacin Resistance C. M. Gant, A. W. Rosingh, J. L. López-Hontangas, M. van der Heijden, F. González-Morán, J. J. E. Bijlsma, E. Canton, and RedMiva (Network of Microbiological Vigilance of Comunidad Valenciana) Full Text PDF Figures

First Report of KPC-Producing Pseudomonas aeruginosa in Brazil Paula Regina Luna de Araújo Jácome, Lílian Rodrigues Alves, Adriane Borges Cabral, Ana Catarina S. Lopes, and Maria Amélia Vieira Maciel Full Text PDF

Pattern of Antimicrobial Susceptibility Obtained from Blood Isolates of a Rare but Emerging Human Pathogen, Gordonia polyisoprenivorans Benjamin D. Moser, Gerald J. Pellegrini, Brent A. Lasker, and June M. Brown Full Text PDF

Breakthrough Bacteremia Due to Extended-Spectrum-β-Lactamase-Producing Klebsiella pneumoniae during Combination Therapy with Colistin and Tigecycline Sun Young Cho, Cheol-In Kang, Doo Ryeon Chung,Kyong Ran Peck, Jae-Hoon Song, and Jun Ho Jang Full Text PDF

Reply to “Breakthrough Bacteremia Due to Extended-Spectrum-β-Lactamase- Producing Klebsiella pneumoniae during Combination Therapy with Colistin and Tigecycline” Mahableshwar Albur, Alan Noel, Karen Bowker, and Alasdair MacGowan Full Text PDF

Previous – Top – Next

Aquaculture Journals Page: 39 of 331

Aquaculture Journals – Table of Contents

AAAppppppllliiieeeddd aaannnddd EEEnnnvvviiirrrooonnnmmmeeennntttaaalll MMMiiicccrrrooobbbiiiooolllooogggyyy

VOLUME 78, PART 12, JUNE 2012 Website

Research articles

Minireviews

Shiga Toxin-Producing Escherichia coli O104:H4: a New Challenge for Microbiology Maite Muniesa, Jens A. Hammerl, Stefan Hertwig, Bernd Appel, and Harald Brüssow Abstract Full Text PDF Author Bios OPEN ACCESS

Life under Multiple Extreme Conditions: Diversity and Physiology of the Halophilic Alkalithermophiles Noha M. Mesbah and Juergen Wiegel Abstract Full Text PDF Figures Author Bios

Biodegradation

Purification and Characterization of the Acetone Carboxylase of Cupriavidus metallidurans Strain CH34 Caroline Rosier, Natalie Leys, Céline Henoumont, Max Mergeay, and Ruddy Wattiez Abstract Full Text PDF Figures Supplemental material

Dioxygenation of the Biphenyl Dioxygenation Product Heike Overwin, Myriam González, Valentina Méndez, Michael Seeger, Victor Wray, and Bernd Hofer Abstract Full Text PDF Figures

Biotechnology

Efficient Production of Polymyxin in the Surrogate Host Bacillus subtilis by Introducing a Foreign ectB Gene and Disrupting the abrB Gene Soo-Young Park, Soo-Keun Choi, Jihoon Kim, Tae-Kwang Oh, and Seung-Hwan Park Abstract Full Text PDF Figures

Production of a Novel Quercetin Glycoside through Metabolic Engineering of Escherichia coli Jeong-A Yoon, Bong-Gyu Kim, Woo Ju Lee, Yoongho Lim, Youhoon Chong, and Joong- Hoon Ahn Abstract Full Text PDF Figures Supplemental material

Heterologous Expression in Pichia pastoris and Characterization of an Endogenous Thermostable and High-Glucose-Tolerant β-Glucosidase from the Termite Nasutitermes takasagoensis Cristiane Akemi Uchima, Gaku Tokuda, Hirofumi Watanabe, Katsuhiko Kitamoto, and Manabu Arioka Abstract Full Text PDF Figures Supplemental material

Catalytic Efficiency Diversification of Duplicate β-1,3-1,4-Glucanases from Neocallimastix patriciarum J11 Yu-Lung Hung, Hui-Jye Chen, Jeng-Chen Liu, and Yo-Chia Chen

Aquaculture Journals Page: 40 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures Supplemental material

Increase in Furfural Tolerance in Ethanologenic Escherichia coli LY180 by Plasmid-Based Expression of thyA Huabao Zheng, Xuan Wang, Lorraine P. Yomano, Keelnatham T. Shanmugam, and Lonnie O. Ingram Abstract Full Text PDF Figures

Overexpression of Genes Encoding Glycolytic Enzymes in Corynebacterium glutamicum Enhances Glucose Metabolism and Alanine Production under Oxygen Deprivation Conditions Shogo Yamamoto, Wataru Gunji, Hiroaki Suzuki, Hiroshi Toda, Masako Suda, Toru Jojima, Masayuki Inui, and Hideaki Yukawa Abstract Full Text PDF Figures Supplemental material

Environmental Microbiology

Resistance to Broad-Spectrum Antibiotics in Aquatic Systems: Anthropogenic Activities Modulate the Dissemination of blaCTX-M-Like Genes Marta Tacão, António Correia, and Isabel Henriques Abstract Full Text PDF Figures Supplemental material

Comparative Analysis of Lactobacillus plantarum WCFS1 Transcriptomes by Using DNA Microarray and Next-Generation Sequencing Technologies Milkha M. Leimena, Michiel Wels, Roger S. Bongers, Eddy J. Smid, Erwin G. Zoetendal, and Michiel Kleerebezem Abstract Full Text PDF Figures Supplemental material

Distribution of Genetic Marker Concentrations for Fecal Indicator Bacteria in Sewage and Animal Feces Catherine A. Kelty, Manju Varma, Mano Sivaganesan, Richard A. Haugland, and Orin C. Shanks Abstract Full Text PDF Figures

Lactobacillus equigenerosi Strain Le1 Invades Equine Epithelial Cells Marlie Botha, Marelize Botes, Ben Loos, Carine Smith, and Leon M. T. Dicks Abstract Full Text PDF Figures

Distribution of Monoclonal Antibody Subgroups and Sequence-Based Types among Legionella pneumophila Serogroup 1 Isolates Derived from Cooling Tower Water, Bathwater, and Soil in Japan Junko Amemura-Maekawa, Kiyomi Kikukawa, Jürgen H. Helbig, Satoko Kaneko, Atsuko Suzuki-Hashimoto, Katsunori Furuhata, Bin Chang, Miyo Murai, Masayuki Ichinose, Makoto Ohnishi, Fumiaki Kura, and and the Working Group for Legionella in Japan Abstract Full Text PDF Figures

No Evidence for Transmission of Antibiotic-Resistant Escherichia coli Strains from Humans to Wild Western Lowland Gorillas in Lopé National Park, Gabon Julio Andre Benavides, Sylvain Godreuil, Rebecca Bodenham, Sandra Ratiarison, Céline Devos, Marie-Odile Petretto, Michel Raymond, and Patricia Escobar-Páramo Abstract Full Text PDF Figures

Development and Evaluation of a Quantitative PCR Assay Targeting Sandhill Crane (Grus canadensis) Fecal Pollution Aquaculture Journals Page: 41 of 331

Aquaculture Journals – Table of Contents

Hodon Ryu, Jingrang Lu, Jason Vogel, Michael Elk, Felipe Chávez-Ramírez, Nicholas Ashbolt, and Jorge Santo Domingo Abstract Full Text PDF Figures

Diversity and Expression of RubisCO Genes in a Perennially Ice-Covered Antarctic Lake during the Polar Night Transition Weidong Kong, David C. Ream, John C. Priscu, and Rachael M. Morgan-Kiss Abstract Full Text PDF Figures Supplemental material

Diversity of Integron- and Culture-Associated Antibiotic Resistance Genes in Freshwater Floc Christopher N. Drudge, Amy V. C. Elliott, Janina M. Plach, Linda J. Ejim, Gerard D. Wright, Ian G. Droppo, and Lesley A. Warren Abstract Full Text PDF Supplemental material

Isolation of Legionella pneumophila from Pluvial Floods by Amoebal Coculture J. A. C. Schalk, A. E. Docters van Leeuwen, W. J. Lodder, H. de Man, S. Euser, J. W. den Boer, and A. M. de Roda Husman Abstract Full Text PDF

Regulation of Polyphosphate Kinase Production by Antisense RNA in Pseudomonas fluorescens Pf0-1 Mark W. Silby, Julie S. Nicoll, and Stuart B. Levy Abstract Full Text PDF Figures

Enzymology and Protein Engineering

Insights into the Maturation of Hyperthermophilic Pyrolysin and the Roles of Its N-Terminal Propeptide and Long C-Terminal Extension Zheng Dai, Heting Fu, Yufeng Zhang, Jing Zeng, Bing Tang, and Xiao-Feng Tang Abstract Full Text PDF Figures Supplemental material

In Vitro Reconstitution of the Complete Clostridium thermocellum Cellulosome and Synergistic Activity on Crystalline Cellulose Jan Krauss, Vladimir V. Zverlov, and Wolfgang H. Schwarz Abstract Full Text PDF Figures

Styrene Oxide of Rhodococcus opacus 1CP, a Highly Stable and Considerably Active Michel Oelschlägel, Janosch A. D. Gröning, Dirk Tischler, Stefan R. Kaschabek, and Michael Schlömann Abstract Full Text PDF Figures

Evolutionary and Genomic Microbiology

Complete Sequence Analysis of Two Methanotroph-Specific repABC-Containing Plasmids from Methylocystis sp. Strain SC2 Bomba Dam, Michael Kube, Somasri Dam, Richard Reinhardt, and Werner Liesack Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Aquaculture Journals Page: 42 of 331

Aquaculture Journals – Table of Contents

Isolation of Lactococcus lactis Mutants Simultaneously Resistant to the Cell Wall-Active Bacteriocin Lcn972, Lysozyme, Nisin, and Bacteriophage c2 Clara Roces, Pascal Courtin, Saulius Kulakauskas, Ana Rodríguez, Marie-Pierre Chapot- Chartier, and Beatriz Martínez Abstract Full Text PDF Figures

Prevalence of Clostridium difficile in Uncooked Ground Meat Products from Pittsburgh, Pennsylvania Scott R. Curry, Jane W. Marsh, Jessica L. Schlackman, and Lee H. Harrison Abstract Full Text PDF

In Vitro Functional and Immunomodulatory Properties of the Lactobacillus helveticus MIMLh5-Streptococcus salivarius ST3 Association That Are Relevant to the Development of a Pharyngeal Probiotic Product Valentina Taverniti, Mario Minuzzo, Stefania Arioli, Ilkka Junttila, Sanna Hämäläinen, Hannu Turpeinen, Diego Mora, Matti Karp, Marko Pesu, and Simone Guglielmetti Abstract Full Text PDF Figures Supplemental material

Diversity of Listeria Species in Urban and Natural Environments Brian D. Sauders, Jon Overdevest, Esther Fortes, Katy Windham, Ynte Schukken, Arthur Lembo, and Martin Wiedmann Abstract Full Text PDF Figures Supplemental material

Efficacy of Octenidine Hydrochloride for Reducing Escherichia coli O157:H7, Salmonella spp., and Listeria monocytogenes on Cattle Hides Sangeetha Ananda Baskaran, Abhinav Upadhyay, Indu Upadhyaya, Varunkumar Bhattaram, and Kumar Venkitanarayanan Abstract Full Text PDF Figures

Genetics and Molecular Biology

Genetic Complementation of the Obligate Marine Actinobacterium Salinispora tropica with the Large Mechanosensitive Channel Gene mscL Rescues Cells from Osmotic Downshock Sergio A. Bucarey, Kevin Penn, Lauren Paul, William Fenical, and Paul R. Jensen Abstract Full Text PDF Figures

Novel Genes Involved in Pseudomonas fluorescens Pf0-1 Motility and Biofilm Formation Matthew D. Mastropaolo, Mark W. Silby, Julie S. Nicoll, and Stuart B. Levy Abstract Full Text PDF Figures Supplemental material

Expression of Chlorite Dismutase and Chlorate Reductase in the Presence of Oxygen and/or Chlorate as the Terminal Electron Acceptor in Ideonella dechloratans Miriam Hellberg Lindqvist, Nicklas Johansson, Thomas Nilsson, and Maria Rova Abstract Full Text PDF Figures

Functional Specificity of Extracellular Nucleases of Shewanella oneidensis MR-1 Magnus Heun, Lucas Binnenkade, Maximilian Kreienbaum, and Kai M. Thormann Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 43 of 331

Aquaculture Journals – Table of Contents

Characterization of the Biosynthetic Operon for the Antibacterial Peptide Herbicolin in Pantoea vagans Biocontrol Strain C9-1 and Incidence in Pantoea Species Tim Kamber, Theresa A. Lansdell, Virginia O. Stockwell, Carol A. Ishimaru, Theo H. M. Smits, and Brion Duffy Abstract Full Text PDF Figures

Biosynthesis of Fusarubins Accounts for Pigmentation of Fusarium fujikuroi Perithecia Lena Studt, Philipp Wiemann, Karin Kleigrewe, Hans-Ulrich Humpf, and Bettina Tudzynski Abstract Full Text PDF Figures Supplemental material

Molecular Identification and Characterization of a New Type of Bovine Enterovirus Shahzad Shaukat, Mehar Angez, Muhammad Masroor Alam, Salmaan Sharif, Adnan Khurshid, Farzana Malik, Muhammad Suleman Rana, Tariq Mahmood, and Syed Sohail Zahoor Zaidi Abstract Full Text PDF Figures

Geomicrobiology

Abundance, Distribution, and Activity of Fe(II)-Oxidizing and Fe(III)-Reducing Microorganisms in Hypersaline Sediments of Lake Kasin, Southern Russia Maren Emmerich, Ankita Bhansali, Tina Lösekann-Behrens, Christian Schröder, Andreas Kappler, and Sebastian Behrens Abstract Full Text PDF Figures Supplemental material

Invertebrate Microbiology

Composition and Seasonal Variation of Rhipicephalus turanicus and Rhipicephalus sanguineus Bacterial Communities Itai Lalzar, Shimon Harrus, Kosta Y. Mumcuoglu, and Yuval Gottlieb Abstract Full Text PDF Figures Supplemental material

Novel Clade of Alphaproteobacterial Endosymbionts Associated with Stinkbugs and Other Yu Matsuura, Yoshitomo Kikuchi, Xian Ying Meng, Ryuichi Koga, and Takema Fukatsu Abstract Full Text PDF Figures Supplemental material

Identification of the Promoter in the Intergenic Region between orf1 and cry8Ea1 Controlled by Sigma H Factor Lixin Du, Lili Qiu, Qi Peng, Didier Lereclus, Jie Zhang, Fuping Song, and Dafang Huang Abstract Full Text PDF Figures Supplemental material

Diversity and Partitioning of Bacterial Populations within the Accessory Nidamental Gland of the Squid Euprymna scolopes Andrew J. Collins, Brenna A. LaBarre, Brian S. Wong Won, Monica V. Shah, Steven Heng, Momena H. Choudhury, Shahela A. Haydar, Jose Santiago, and Spencer V. Nyholm Abstract Full Text PDF Figures

Shell Biofilm Nitrification and Gut Denitrification Contribute to Emission of Nitrous Oxide by the Invasive Freshwater Dreissena polymorpha (Zebra Mussel) Nanna B. Svenningsen, Ines M. Heisterkamp, Maria Sigby-Clausen, Lone H. Larsen, Lars Peter Nielsen, Peter Stief, and Andreas Schramm Aquaculture Journals Page: 44 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

Methods

Modified Cre-loxP Recombination in Aspergillus oryzae by Direct Introduction of Cre Recombinase for Marker Gene Rescue Osamu Mizutani, Kazuo Masaki, Katsuya Gomi, and Haruyuki Iefuji Abstract Full Text PDF Figures Supplemental material

Low-Temperature Decontamination with Hydrogen Peroxide or Chlorine Dioxide for Space Applications T. Pottage, S. Macken, K. Giri, J. T. Walker, and A. M. Bennett Abstract Full Text PDF Figures

Simple Absolute Quantification Method Correcting for Quantitative PCR Efficiency Variations for Microbial Community Samples Robert Brankatschk, Natacha Bodenhausen, Josef Zeyer, and Helmut Bürgmann Abstract Full Text PDF Figures Supplemental material

Quantitative PCR for Tracking the Megaplasmid-Borne Biodegradation Potential of a Model Sphingomonad Erica M. Hartmann, Jonathan P. Badalamenti, Rosa Krajmalnik-Brown, and Rolf U. Halden Abstract Full Text PDF Figures

Freeze-Coring Method for Characterization of Microbial Community Structure and Function in Wetland Soils at High Spatial Resolution Alessandro G. Franchini and Josef Zeyer Abstract Full Text PDF Figures Supplemental material

High-Throughput Screening for Streptomyces Antibiotic Biosynthesis Activators Li Chen, Yemin Wang, Hang Guo, Min Xu, Zixin Deng, and Meifeng Tao Abstract Full Text PDF Figures

Microbial Ecology

Inclusion of Chicory (Cichorium intybus L.) in Pigs' Diets Affects the Intestinal Microenvironment and the Gut Microbiota Haoyu Liu, Emma Ivarsson, Johan Dicksved, Torbjörn Lundh, and Jan Erik Lindberg Abstract Full Text PDF Figures Supplemental material

Biofilm Roughness Determines Cryptosporidium parvum Retention in Environmental Biofilms E. A. Wolyniak DiCesare, B. R. Hargreaves, and K. L. Jellison Abstract Full Text PDF Figures

Effects of Essential Oils on Methane Production and Fermentation by, and Abundance and Diversity of, Rumen Microbial Populations Amlan K. Patra and Zhongtang Yu Abstract Full Text PDF Figures

Determination of Wolbachia Diversity in Butterflies from Western Ghats, India, by a Multigene Approach

Aquaculture Journals Page: 45 of 331

Aquaculture Journals – Table of Contents

Bipinchandra K. Salunke, Rahul C. Salunkhe, Dhiraj P. Dhotre, Sandeep A. Walujkar, Avinash B. Khandagale, Rahul Chaudhari, Rakesh K. Chandode, Hemant V. Ghate, Milind S. Patole, John H. Werren, and Yogesh S. Shouche Abstract Full Text PDF Figures

High Diversity and Novel Species of Pseudomonas aeruginosa Bacteriophages Omar Sepúlveda-Robles, Luis Kameyama, and Gabriel Guarneros Abstract Full Text PDF Figures Supplemental material

Biofilms Reduce Solar Disinfection of Cryptosporidium parvum Oocysts E. A. Wolyniak DiCesare, B. R. Hargreaves, and K. L. Jellison Abstract Full Text PDF Figures

Mycology

Genome-Based Cluster Deletion Reveals an Endocrocin Biosynthetic Pathway in Aspergillus fumigatus Fang Yun Lim, Yanpeng Hou, Yiming Chen, Jee-Hwan Oh, Inhyung Lee, Tim S. Bugni, and Nancy P. Keller Abstract Full Text PDF Figures Supplemental material

Contact-Free Inactivation of Candida albicans Biofilms by Cold Atmospheric Air Plasma Tim Maisch, Tetsuji Shimizu, Georg Isbary, Julia Heinlin, Sigrid Karrer, Tobias G. Klämpfl, Yang-Fang Li, Gregor Morfill, and Julia L. Zimmermann Abstract Full Text PDF Figures

Physiology

Bactericidal Antibiotics Do Not Appear To Cause Oxidative Stress in Listeria monocytogenes Louise Feld, Gitte M. Knudsen, and Lone Gram Abstract Full Text PDF Figures

Plant Microbiology

A Positive Correlation between Bacterial Autoaggregation and Biofilm Formation in Native Sinorhizobium meliloti Isolates from Argentina Fernando G. Sorroche, Mariana B. Spesia, Ángeles Zorreguieta, and Walter Giordano Abstract Full Text PDF Figures

Fungal Endophytic Communities in Grapevines (Vitis vinifera L.) Respond to Crop Management Michael Pancher, Marco Ceol, Paola Elisa Corneo, Claudia Maria Oliveira Longa, Sohail Yousaf, Ilaria Pertot, and Andrea Campisano Abstract Full Text PDF Figures

Characterization and Identification of Productivity-Associated Rhizobacteria in Wheat Michael Anderson and Joshua Habiger Abstract Full Text PDF Figures

Public Health Microbiology

Aquaculture Journals Page: 46 of 331

Aquaculture Journals – Table of Contents

Norwegian Sheep Are an Important Reservoir for Human-Pathogenic Escherichia coli O26:H11 Lin T. Brandal, Camilla Sekse, Bjørn-Arne Lindstedt, Marianne Sunde, Inger Løbersli, Anne Margrete Urdahl, and Georg Kapperud Abstract Full Text PDF Figures

High-Throughput Sequence-Based Analysis of the Intestinal Microbiota of Weanling Pigs Fed Genetically Modified MON810 Maize Expressing Bacillus thuringiensis Cry1Ab (Bt Maize) for 31 Days Stefan G. Buzoianu, Maria C. Walsh, Mary C. Rea, Orla O'Sullivan, Paul D. Cotter, R. Paul Ross, Gillian E. Gardiner, and Peadar G. Lawlor Abstract Full Text PDF Figures Supplemental material

Identification of Encephalitozoon and Enterocytozoon (Microsporidia) Spores in Stool and Urine Samples Obtained from Free-Living South American Coatis (Nasua nasua) Maria Anete Lallo, Patrícia Calábria, Eduardo Fernandes Bondan, and Liliane Milanelo Abstract Full Text PDF

Previous – Top – Next

VOLUME 78, PART 13, JULY 2012 Website

Research articles

Minireview

Historical and Recent Achievements in the Field of Microbial Degradation of Natural and Synthetic Rubber Meral Yikmis and Alexander Steinbüchel Abstract Full Text PDF Figures

Biotechnology

Biotransformation Strategy To Reduce Allergens in Propolis Claudio Gardana, Andrea Barbieri, Paolo Simonetti, and Simone Guglielmetti Abstract Full Text PDF Figures

Environmental Microbiology

Infections and Coinfections of Questing Ixodes ricinus Ticks by Emerging Zoonotic Pathogens in Western Switzerland Elena Lommano, Luce Bertaiola, Christèle Dupasquier, and Lise Gern Abstract Full Text PDF

Enzymology and Protein Engineering

Aspergillus niger DLFCC-90 Rhamnoside , a New Type of Flavonoid Glycoside Hydrolase Tingqiang Liu, Hongshan Yu, Chunzhi Zhang, Mingchun Lu, Yongzhe Piao, Masashi Ohba, Minqian Tang, Xiaodong Yuan, Shenghua Wei, Kan Wang, Anzhou Ma, Xue Feng, Siqing Qin, Chisato Mukai, Akira Tsuji, and Fengxie Jin Abstract Full Text PDF Figures Aquaculture Journals Page: 47 of 331

Aquaculture Journals – Table of Contents

Evolutionary and Genomic Microbiology

Emergence of Atypical Mycoplasma agalactiae Strains Harboring a New Prophage and Associated with an Alpine Wild Ungulate Mortality Episode Florence Tardy, Eric Baranowski, Laurent-Xavier Nouvel, Virginie Mick, Lucía Manso-Silvàn, François Thiaucourt, Patricia Thébault, Marc Breton, Pascal Sirand-Pugnet, Alain Blanchard, Alexandre Garnier, Philippe Gibert, Yvette Game, François Poumarat, and Christine Citti Abstract Full Text PDF Figures Supplemental material

Detecting Genetic Introgression: High Levels of Intersubspecific Recombination Found in Xylella fastidiosa in Brazil Leonard Nunney, Xiaoli Yuan, Robin E. Bromley, and Richard Stouthamer Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Involvement of Clostridium botulinum ATCC 3502 Sigma Factor K in Early- Stage Sporulation David G. Kirk, Elias Dahlsten, Zhen Zhang, Hannu Korkeala, and Miia Lindström Abstract Full Text PDF Figures Supplemental material

Multilocus Sequence Typing Scheme for the Characterization of 936-Like Phages Infecting Lactococcus lactis Maxim Moisan and Sylvain Moineau Abstract Full Text PDF Figures Supplemental material

Phylogenetically Related Argentinean and Australian Escherichia coli O157 Isolates Are Distinguished by Virulence Clades and Alternative Shiga Toxin 1 and 2 Prophages Glen E. Mellor, Eby M. Sim, Robert S. Barlow, Beatriz A. D'Astek, Lucia Galli, Isabel Chinen, Marta Rivas, and Kari S. Gobius Abstract Full Text PDF Figures

Genetics and Molecular Biology

Identification and Mechanism of Evolution of New Alleles Coding for the AIDA-I Autotransporter of Porcine Pathogenic Escherichia coli Jean-Philippe Côté, Frédéric Berthiaume, Sébastien Houle, John M. Fairbrother, Charles M. Dozois, and Michael Mourez Abstract Full Text PDF Figures Supplemental material

Lactobacillus casei Ferments the N-Acetylglucosamine Moiety of Fucosyl-α-1,3- N-Acetylglucosamine and Excretes L-Fucose Jesús Rodríguez-Díaz, Antonio Rubio-del-Campo, and María J. Yebra Abstract Full Text PDF Figures Supplemental material

Recombinogenic Properties of Pyrococcus furiosus Strain COM1 Enable Rapid Selection of Targeted Mutants Joel Farkas, Karen Stirrett, Gina L. Lipscomb, William Nixon, Robert A. Scott, Michael W. W. Adams, and Janet Westpheling Abstract Full Text PDF Figures Supplemental material

Precise Manipulation of the Clostridium difficile Chromosome Reveals a Lack of Association between the tcdC Genotype and Toxin Production Aquaculture Journals Page: 48 of 331

Aquaculture Journals – Table of Contents

Stephen T. Cartman, Michelle L. Kelly, Daniela Heeg, John T. Heap, and Nigel P. Minton Abstract Full Text PDF Figures Supplemental material

Geomicrobiology

Quantification of Tinto River Sediment Microbial Communities: Importance of Sulfate-Reducing Bacteria and Their Role in Attenuating Acid Mine Drainage Irene Sánchez-Andrea, Katrin Knittel, Rudolf Amann, Ricardo Amils, and José Luis Sanz Abstract Full Text PDF Figures

Invertebrate Microbiology

Squid-Derived Chitin Oligosaccharides Are a Chemotactic Signal during Colonization by Vibrio fischeri Mark J. Mandel, Amy L. Schaefer, Caitlin A. Brennan, Elizabeth A. C. Heath-Heckman, Cindy R. DeLoney-Marino, Margaret J. McFall-Ngai, and Edward G. Ruby Abstract Full Text PDF Figures

High-Resolution Analysis of Gut Environment and Bacterial Microbiota Reveals Functional Compartmentation of the Gut in Wood-Feeding Higher Termites (Nasutitermes spp.) Tim Köhler, Carsten Dietrich, Rudolf H. Scheffrahn, and Andreas Brune Abstract Full Text PDF Figures Supplemental material

A 50-Kilodalton Cry2A Peptide Is Lethal to Bombyx mori and Lymantria dispar Masataka Ohsawa, Miki Tanaka, Kenta Moriyama, Mitsuaki Shimazu, Shin-ichiro Asano, Kazuhisa Miyamoto, Kohsuke Haginoya, Toshiaki Mitsui, Tomoaki Kouya, Masayuki Taniguchi, and Hidetaka Hori Abstract Full Text PDF Figures

Polyphyly of Gut Symbionts in Stinkbugs of the Family Cydnidae Takahiro Hosokawa, Yoshitomo Kikuchi, Naruo Nikoh, and Takema Fukatsu Abstract Full Text PDF Figures Supplemental material

Methods

Two Systems for Targeted Gene Deletion in Coxiella burnetii Paul A. Beare, Charles L. Larson, Stacey D. Gilk, and Robert A. Heinzen Abstract Full Text PDF Figures Supplemental material

High-Throughput PCR Assays To Monitor Wolbachia Infection in the Dengue Mosquito (Aedes aegypti) and Drosophila simulans Siu F. Lee, Vanessa L. White, Andrew R. Weeks, Ary A. Hoffmann, and Nancy M. Endersby Abstract Full Text PDF Figures Supplemental material

Microbial Ecology

Implications of Microfauna-Host Interactions for Trypanosome Transmission Dynamics in Glossina fuscipes fuscipes in Uganda Uzma Alam, Chaz Hyseni, Rebecca E. Symula, Corey Brelsfoard, Yineng Wu, Oleg Kruglov, Jingwen Wang, Richard Echodu, Victor Alioni, Loyce M. Okedi, Adalgisa Caccone, and Serap Aksoy Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 49 of 331

Aquaculture Journals – Table of Contents

Shifts in Identity and Activity of Methanotrophs in Arctic Lake Sediments in Response to Temperature Changes Ruo He, Matthew J. Wooller, John W. Pohlman, John Quensen, James M. Tiedje, and Mary Beth Leigh Abstract Full Text PDF Figures Supplemental material

Temporal Orchestration of Glycogen Synthase (GlgA) Gene Expression and Glycogen Accumulation in the Oceanic Picoplanktonic Cyanobacterium Synechococcus sp. Strain WH8103 Michael Wyman and Claire Thom Abstract Full Text PDFFigures

Influence of Salinity on the Bacterial Community Composition in Lake Bosten, a Large Oligosaline Lake in Arid Northwestern China Xiangming Tang, Guijuan Xie, Keqiang Shao, Sai·Bayartu, Yuangao Chen, and Guang Gao Abstract Full Text PDF Figures Supplemental material

Mycology

Differential Regulation by Organic Compounds and Heavy Metals of Multiple Laccase Genes in the Aquatic Hyphomycete Clavariopsis aquatica Magali Solé, Ines Müller, Marek J. Pecyna, Ingo Fetzer, Hauke Harms, and Dietmar Schlosser Abstract Full Text PDF Figures Supplemental material

Physiology

Impact of Malic Enzymes on Antibiotic and Triacylglycerol Production in Streptomyces coelicolor Eduardo Rodriguez, Laura Navone, Paula Casati, and Hugo Gramajo Abstract Full Text PDF Figures Supplemental material

Plant Microbiology

Requirement of Siderophore Biosynthesis for Plant Colonization by Salmonella enterica Ling-yun Hao, David Kyle Willis, Helene Andrews-Polymenis, Michael McClelland, and Jeri D. Barak Abstract Full Text PDF Figures

Public Health Microbiology

Variable within- and between-Herd Diversity of CTX-M Cephalosporinase- Bearing Escherichia coli Isolates from Dairy Cattle Dixie F. Mollenkopf, Matthew F. Weeman, Joshua B. Daniels, Melanie J. Abley, Jennifer L. Mathews, Wondwossen A. Gebreyes, and Thomas E. Wittum Abstract Full Text PDF Figures

Phylogenetic Grouping and Virulence Potential of Extended-Spectrum-β- Lactamase-Producing Escherichia coli Strains in Cattle Charlotte Valat, Frédéric Auvray, Karine Forest, Véronique Métayer, Emilie Gay, Carine Peytavin de Garam, Jean-Yves Madec, and Marisa Haenni Abstract Full Text PDF

Aquaculture Journals Page: 50 of 331

Aquaculture Journals – Table of Contents

Erratum

Association of Campylobacter jejuni Cj0859c Gene (fspA) Variants with Different C. jejuni Multilocus Sequence Types C. P. A. de Haan, R. Kivistö, and M. L. Hänninen Full Text PDF Previous – Top – Next

VOLUME 78, PART 14, JULY 2012 Website

Research articles

Biodegradation

Cloning of a Novel Arylamidase Gene from Paracoccus sp. Strain FLN-7 That Hydrolyzes Amide Pesticides Jun Zhang, Jin-Gang Yin, Bao-Jian Hang, Shu Cai, Jian He, Shun-Gui Zhou, and Shun-Peng Li Abstract Full Text PDF Figures Supplemental material

Biotechnology

Involvement of a Natural Fusion of a Cytochrome P450 and a Hydrolase in Mycophenolic Acid Biosynthesis Bjarne Gram Hansen, Ewelina Mnich, Kristian Fog Nielsen, Jakob Blæsbjerg Nielsen, Morten Thrane Nielsen, Uffe Hasbro Mortensen, Thomas Ostenfeld Larsen, and Kiran Raosaheb Patil Abstract Full Text PDF Figures Supplemental material

Synthesis of Chiral Cyanohydrins by Recombinant Escherichia coli Cells in a Micro-Aqueous Reaction System Kathrin Emmi Scholz, Daniel Okrob, Benita Kopka, Alexander Grünberger, Martina Pohl, Karl-Erich Jaeger, and Ulrich Krauss Abstract Full Text PDF Figures Supplemental material

Environmental Microbiology

Biochemical Characterization of a Novel Haloalkane Dehalogenase from a Cold- Adapted Bacterium Ivana Drienovska, Eva Chovancova, Tana Koudelakova, Jiri Damborsky, and Radka Chaloupkova Abstract Full Text PDF Figures Supplemental material

Enzymology and Protein Engineering

Influence of a Mannan Binding Family 32 Carbohydrate Binding Module on the Activity of the Appended Mannanase Kimiya Mizutani, Vânia O. Fernandes, Shuichi Karita, Ana S. Luís, Makiko Sakka, Tetsuya Kimura, Adam Jackson, Xiaoyang Zhang, Carlos M. G. A. Fontes, Harry J. Gilbert, and Kazuo Sakka Abstract Full Text PDF Figures

Novel Metagenome-Derived, Cold-Adapted Alkaline Phospholipase with Superior Lipase Activity as an Intermediate between Phospholipase and Lipase

Aquaculture Journals Page: 51 of 331

Aquaculture Journals – Table of Contents

Mi-Hwa Lee, Ki-Hoon Oh, Chul-Hyung Kang, Ji-Hoon Kim, Tae-Kwang Oh, Choong-Min Ryu, and Jung-Hoon Yoon Abstract Full Text PDF Figures Supplemental material

Novel Phytases from Bifidobacterium pseudocatenulatum ATCC 27919 and Bifidobacterium longum subsp. infantis ATCC 15697 Juan Antonio Tamayo-Ramos, Juan Mario Sanz-Penella, María J. Yebra, Vicente Monedero,and Monika Haros Abstract Full Text PDF Figures Supplemental material

Evolutionary and Genomic Microbiology

Phylomark, a Tool To Identify Conserved Phylogenetic Markers from Whole- Genome Alignments Jason W. Sahl, Malcolm N. Matalka, and David A. Rasko Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Human Milk Oligosaccharides Promote the Growth of Staphylococci K. M. Hunt, J. Preuss, C. Nissan, C. A. Davlin, J. E. Williams, B. Shafii, A. D. Richardson, M. K. McGuire, L. Bode, and M. A. McGuire Abstract Full Text PDF Figures Supplemental material

No Beneficial Effects Evident for Enterococcus faecium NCIMB 10415 in Weaned Pigs Infected with Salmonella enterica Serovar Typhimurium DT104 Susanne Kreuzer, Pawel Janczyk, Jens Aßmus, Michael F. G. Schmidt, Gudrun A. Brockmann, and Karsten Nöckler Abstract Full Text PDF Figures

Expression of the Arginine Deiminase Pathway Genes in Lactobacillus sakei Is Strain Dependent and Is Affected by the Environmental pH T. Rimaux, A. Rivière, K. Illeghems, S. Weckx, L. De Vuyst, and F. Leroy Abstract Full Text PDF Figures Supplemental material

Elevated Enterotoxin A Expression and Formation in Staphylococcus aureus and Its Association with Prophage Induction Rong Cao, Nikoleta Zeaki, Nina Wallin-Carlquist, Panagiotis N. Skandamis, Jenny Schelin, and Peter Rådström Abstract Full Text PDF Figures

Temperature-Dependent Survival of Hepatitis A Virus during Storage of Contaminated Onions Y. Sun, D. T. Laird, and Y. C. Shieh Abstract Full Text PDF Figures

Evidence for Lack of Acquisition of Tolerance in Salmonella enterica Serovar Typhimurium ATCC 14028 after Exposure to Subinhibitory Amounts of Origanum vulgare L. Essential Oil and Carvacrol Isabelle da Silva Luz, Nelson Justino Gomes Neto, Adassa Gama Tavares, Pollyana Campos Nunes, Marciane Magnani, and Evandro Leite de Souza Abstract Full Text PDF Figures

Genetics and Molecular Biology

Aquaculture Journals Page: 52 of 331

Aquaculture Journals – Table of Contents

Genetic and Functional Characterization of Cyclic Lipopeptide White-Line- Inducing Principle (WLIP) Production by Rice Rhizosphere Isolate Pseudomonas putida RW10S2 Hassan Rokni-Zadeh, Wen Li, Aminael Sanchez-Rodriguez, Davy Sinnaeve, Jef Rozenski, José C. Martins, and René De Mot Abstract Full Text PDF Figures Supplemental material

Identification of a Novel Dihydrodaidzein Racemase Essential for Biosynthesis of Equol from Daidzein in Lactococcus sp. Strain 20-92 Yoshikazu Shimada, Masayuki Takahashi, Norihiro Miyazawa, Yasuhiro Abiru, Shigeto Uchiyama, and Haretsugu Hishigaki Abstract Full Text PDF Figures Supplemental material

Development of a Double-Crossover Markerless Gene Deletion System in Bifidobacterium longum: Functional Analysis of the α-Galactosidase Gene for Raffinose Assimilation Yosuke Hirayama, Mikiyasu Sakanaka, Hidenori Fukuma, Hiroki Murayama, Yasunobu Kano, Satoru Fukiya, and Atsushi Yokota Abstract Full Text PDF Figures Supplemental material

TatAc, the Third TatA Subunit of Bacillus subtilis, Can Form Active Twin- Arginine with the TatCd and TatCy Subunits Carmine G. Monteferrante, Jacopo Baglieri, Colin Robinson, and Jan Maarten van Dijl Abstract Full Text PDF Figures

Analysis of Predicted Carbohydrate Transport Systems Encoded by Bifidobacterium bifidum PRL2010 Francesca Turroni, Francesco Strati, Elena Foroni, Fausta Serafini, Sabrina Duranti, Douwe van Sinderen, and Marco Ventura Abstract Full Text PDF Figures Supplemental material

Catabolite Repression Control of Pyocyanin Biosynthesis at an Intersection of Primary and Secondary Metabolism in Pseudomonas aeruginosa Jiaofang Huang, Elisabeth Sonnleitner, Bin Ren, Yuquan Xu, and Dieter Haas Abstract Full Text PDF Figures Supplemental material

Influence of Exposure Time on Gene Expression by Human Intestinal Epithelial Cells Exposed to Lactobacillus acidophilus Sarah O'Flaherty and Todd R. Klaenhammer AbstractFull Text PDF Figures Supplemental material

Invertebrate Microbiology

Histopathological Effects of the Yen-Tc Toxin Complex from Yersinia entomophaga MH96 (Enterobacteriaceae) on the Costelytra zealandica (Coleoptera: Scarabaeidae) Larval Midgut Sean D. G. Marshall, Michelle C. Hares, Sandra A. Jones, Lincoln A. Harper, James R. Vernon, Duane P. Harland, Trevor A. Jackson, and Mark R. H. Hurst Abstract Full Text PDF Figures Supplemental material

Associations of Yeasts with Spotted-Wing Drosophila (Drosophila suzukii; Diptera: Drosophilidae) in Cherries and Raspberries Kelly A. Hamby, Alejandro Hernández, Kyria Boundy-Mills, and Frank G. Zalom Aquaculture Journals Page: 53 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures Supplemental material

Methods

Mining New Crystal Protein Genes from Bacillus thuringiensis on the Basis of Mixed Plasmid-Enriched Genome Sequencing and a Computational Pipeline Weixing Ye, Lei Zhu, Yingying Liu, Neil Crickmore, Donghai Peng, Lifang Ruan, and Ming Sun Abstract Full Text PDF Figures Supplemental material

Natural Transformation of Gallibacterium anatis Bodil M. Kristensen, Sunita Sinha, John D. Boyce, Anders M. Bojesen, Joshua C. Mell, and Rosemary J. Redfield Abstract Full Text PDF Figures

Screening for a Single-Chain Variable-Fragment Antibody That Can Effectively Neutralize the Cytotoxicity of the Vibrio parahaemolyticus Thermolabile Hemolysin Rongzhi Wang, Sui Fang, Dinglong Wu, Junwei Lian, Jue Fan, Yanfeng Zhang, Shihua Wang, and Wenxiong Lin Abstract Full Text PDF Figures

Microbial Ecology

Production of the Antimicrobial Secondary Metabolite Indigoidine Contributes to Competitive Surface Colonization by the Marine Roseobacter Phaeobacter sp. Strain Y4I W. Nathan Cude, Jason Mooney, Arash A. Tavanaei, Mary K. Hadden, Ashley M. Frank, Christopher A. Gulvik, Amanda L. May, and Alison Buchan Abstract Full Text PDF Figures Supplemental material

Syntrophic Oxidation of Propionate in Rice Field Soil at 15 and 30°C under Methanogenic Conditions Yanlu Gan, Qiongfen Qiu, Pengfei Liu, Junpeng Rui, and Yahai Lu Abstract Full Text PDF Figures Supplemental material

Effect of Phenotypic Residual Feed Intake and Dietary Forage Content on the Rumen Microbial Community of Beef Cattle Ciara A. Carberry, David A. Kenny, Sukkyan Han, Matthew S. McCabe, and Sinead M. Waters Abstract Full Text PDF Figures Supplemental material

Mycology

The Wood Rot Ascomycete Xylaria polymorpha Produces a Novel GH78 Glycoside Hydrolase That Exhibits α-L-Rhamnosidase and Feruloyl Esterase Activities and Releases Hydroxycinnamic Acids from Lignocelluloses Do Huu Nghi, Britta Bittner, Harald Kellner, Nico Jehmlich, René Ullrich, Marek J. Pecyna, Paula Nousiainen, Jussi Sipilä, Le Mai Huong, Martin Hofrichter, and Christiane Liers Abstract Full Text PDF Figures Supplemental material

Physiology

Aquaculture Journals Page: 54 of 331

Aquaculture Journals – Table of Contents

Effects of Nitrogen Dioxide and Anoxia on Global Gene and Protein Expression in Long-Term Continuous Cultures of Nitrosomonas eutropha C91 Boran Kartal, Hans J. C. T. Wessels, Erwin van der Biezen, Kees-Jan Francoijs, Mike S. M. Jetten, Martin G. Klotz, and Lisa Y. Stein Abstract Full Text PDF Figures Supplemental material

Proteomic Phenotyping of Novosphingobium nitrogenifigens Reveals a Robust Capacity for Simultaneous Nitrogen Fixation, Polyhydroxyalkanoate Production, and Resistance to Reactive Oxygen Species Anne-Marie Smit, Timothy J. Strabala, Lifeng Peng, Pisana Rawson, Gareth Lloyd-Jones, and T. William Jordan Abstract Full Text PDF Figures Supplemental material

Plant Microbiology

Involvement of Trichoderma Trichothecenes in the Biocontrol Activity and Induction of Plant Defense-Related Genes M. G. Malmierca, R. E. Cardoza, N. J. Alexander, S. P. McCormick, R. Hermosa, E. Monte, and S. Gutiérrez Abstract Full Text PDF Figures Supplemental material

Banana-Associated Microbial Communities in Uganda Are Highly Diverse but Dominated by Enterobacteriaceae Bettina Rossmann, Henry Müller, Kornelia Smalla, Samuel Mpiira, John Baptist Tumuhairwe, Charles Staver, and Gabriele Berg Abstract Full Text PDF Figures Supplemental material

Erratum

Evidence of Host-Associated Populations of Cryptosporidium parvum in Italy Rosanna Drumo, Giovanni Widmer, Liam J. Morrison, Andy Tait, Vincenzo Grelloni, Nicoletta D'Avino, Edoardo Pozio, and Simone M. Cacciò Appl. Environ. Microbiol. July 2012 78:5033; doi:10.1128/AEM.01451-12 Full Text PDF Previous – Top – Next

VOLUME 78, PART 15, AUGUST 2012 Website

Research articles

Minireviews

Accessing the Inaccessible: Molecular Tools for Bifidobacteria Zhongke Sun, Annika Baur, Daria Zhurina, Jing Yuan, and Christian U. Riedel Abstract Full Text PDF

Epoxy Coenzyme A Thioester Pathways for Degradation of Aromatic Compounds Wael Ismail and Johannes Gescher Abstract Full Text PDF Figures

Biodegradation

Aquaculture Journals Page: 55 of 331

Aquaculture Journals – Table of Contents

Enhanced Tolerance to Naphthalene and Enhanced Rhizoremediation Performance for Pseudomonas putida KT2440 via the NAH7 Catabolic Plasmid Matilde Fernández, José Luis Niqui-Arroyo, Susana Conde, Juan Luis Ramos, and Estrella Duque Abstract Full Text PDF Figures Supplemental material

Isolation of a Gene Responsible for the Oxidation of trans-Anethole to para- Anisaldehyde by Pseudomonas putida JYR-1 and Its Expression in Escherichia coli Dongfei Han, Ji-Young Ryu, Robert A. Kanaly, and Hor-Gil Hur Abstract Full Text PDF Figures Supplemental material

Discovery of a trans-Dichloroethene-Respiring Dehalogenimonas Species in the 1,1,2,2-Tetrachloroethane-Dechlorinating WBC-2 Consortium Marie J. Manchester, Laura A. Hug, Matt Zarek, Anna Zila, and Elizabeth A. Edwards Abstract Full Text PDF Figures Supplemental material

Modeling of Phenoxy Acid Herbicide Mineralization and Growth of Microbial Degraders in 15 Soils Monitored by Quantitative Real-Time PCR of the Functional tfdA Gene Jacob Bælum, Emmanuel Prestat, Maude M. David, Bjarne W. Strobel, and Carsten S. Jacobsen Abstract Full Text PDF Figures Supplemental material

O-Demethylation and Successive Oxidative Dechlorination of Methoxychlor by Bradyrhizobium sp. Strain 17-4, Isolated from River Sediment Koji Satsuma, Minoru Masuda, and Kiyoshi Sato Abstract Full Text PDF Figures Supplemental material

Involvement of a Putative Cyclic AMP Receptor Protein (CRP)-Like Binding Sequence and a CRP-Like Protein in Glucose-Mediated Catabolite Repression of thn Genes in Rhodococcus sp. Strain TFB Laura Tomás-Gallardo, Eduardo Santero, and Belén Floriano Abstract Full Text PDF Figures

Biotechnology

Galacturonic Acid Inhibits the Growth of Saccharomyces cerevisiae on Galactose, Xylose, and Arabinose Eline H. Huisjes, Erik de Hulster, Jan C. van Dam, Jack T. Pronk, and Antonius J. A. van Maris Abstract Full Text PDF Figures

Improvement of FK506 Production in Streptomyces tsukubaensis by Genetic Enhancement of the Supply of Unusual Polyketide Extender Units via Utilization of Two Distinct Site-Specific Recombination Systems Dandan Chen, Qi Zhang, Qinglin Zhang, Peilin Cen, Zhinan Xu, and Wen Liu Abstract Full Text PDF Figures

Genome Sequence of Thermotolerant Bacillus methanolicus: Features and Regulation Related to Methylotrophy and Production of L-Lysine and L- Glutamate from Methanol Tonje M. B. Heggeset, Anne Krog, Simone Balzer, Alexander Wentzel, Trond E. Ellingsen, and Trygve Brautaset Aquaculture Journals Page: 56 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

Enrichment of Microbial Electrolysis Cell Biocathodes from Sediment Microbial Fuel Cell Bioanodes John M. Pisciotta, Zehra Zaybak, Douglas F. Call, Joo-Youn Nam, and Bruce E. Logan Abstract Full Text PDF Figures Supplemental material

Influence of Cofermentation by Amylolytic Lactobacillus plantarum and Lactococcus lactis Strains on the Fermentation Process and Rheology of Sorghum Porridge Ivan M. Mukisa, Yusuf B. Byaruhanga, Charles M. B. K. Muyanja, Matthew Aijuka, Reidar B. Schüller, Stefan Sahlstrøm, Thor Langsrud, and Judith A. Narvhus Abstract Full Text PDF Figures Supplemental material

Expression of Bacterial GshF in Pichia pastoris for Glutathione Production Shaolin Ge, Taicheng Zhu, and Yin Li Abstract Full Text PDF Figures

Upregulation of Plasmid Genes during Stationary Phase in Synechocystis sp. Strain PCC 6803, a Cyanobacterium Bertram M. Berla and Himadri B. Pakrasi Abstract Full Text PDF Figures

Environmental Microbiology

Microbial Degradation of 2,4-Dichlorophenoxyacetic Acid on the Greenland Ice Sheet Marek Stibal, Jacob Bælum, William E. Holben, Sebastian R. Sørensen, Anders Jensen, and Carsten S. Jacobsen Abstract Full Text PDF Figures

Lactobacillus reuteri Protects Epidermal Keratinocytes from Staphylococcus aureus-Induced Cell Death by Competitive Exclusion Tessa Prince, Andrew J. McBain, and Catherine A. O'Neill Abstract Full Text PDF Figures Supplemental material

Quantitative Estimation of the Viability of Toxoplasma gondii Oocysts in Soil Maud Lélu, Isabelle Villena, Marie-Laure Dardé, Dominique Aubert, Régine Geers, Emilie Dupuis, Francine Marnef, Marie-Lazarine Poulle, Cécile Gotteland, Aurélien Dumètre, and Emmanuelle Gilot-Fromont Abstract Full Text PDF Figures

Ammonia Inactivation of Ascaris Ova in Ecological Compost by Using Urine and Ash James W. McKinley, Rebecca E. Parzen, and Álvaro Mercado Guzmán Abstract Full Text PDF Figures

Microbial Quality of Tropical Inland Waters and Effects of Rainfall Events Tasha M. Santiago-Rodriguez, Raymond L. Tremblay, Carlos Toledo-Hernandez, Joel E. Gonzalez-Nieves, Hodon Ryu, Jorge W. Santo Domingo, and Gary A. Toranzos Abstract Full Text PDF Figures

Ciliates Expel Environmental Legionella-Laden Pellets To Stockpile Food

Aquaculture Journals Page: 57 of 331

Aquaculture Journals – Table of Contents

Fuhito Hojo, Daisuke Sato, Junji Matsuo, Masaki Miyake, Shinji Nakamura, Miyuki Kunichika, Yasuhiro Hayashi, Mitsutaka Yoshida, Kaori Takahashi, Hiromu Takemura, Shigeru Kamiya, and Hiroyuki Yamaguchi Abstract Full Text PDF Figures Supplemental material

Oral Spirochetes Implicated in Dental Diseases Are Widespread in Normal Human Subjects and Carry Extremely Diverse Integron Gene Cassettes Yu-Wei Wu, Mina Rho, Thomas G. Doak, and Yuzhen Ye Abstract Full Text PDF Figures Supplemental material

Intricate Interactions between the Bloom-Forming Cyanobacterium Microcystis aeruginosa and Foreign Genetic Elements, Revealed by Diversified Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Signatures Sotaro Kuno, Takashi Yoshida, Takakazu Kaneko, and Yoshihiko Sako Abstract Full Text PDF Figures Supplemental material

Detection of Coxiella burnetii DNA in Inhalable Airborne Dust Samples from Goat Farms after Mandatory Lenny Hogerwerf, Floor Borlée, Kelly Still, Dick Heederik, Bart van Rotterdam, Arnout de Bruin, Mirjam Nielen, and Inge M. Wouters Abstract Full Text PDF

Diversity of Gene Cassette Promoters in Class 1 Integrons from Wastewater Environments Alexandra Moura, Thomas Jové, Marie-Cécile Ploy, Isabel Henriques, and António Correia Abstract Full Text PDF Figures

The Bacterial Surface Layer Provides Protection against Antimicrobial Peptides César de la Fuente-Núñez, Jan Mertens, John Smit, and Robert E. W. Hancock Abstract Full Text PDF Figures

Enzymology and Protein Engineering

Gene Cloning, Purification, and Characterization of a Novel Peptidoglutaminase-Asparaginase from Aspergillus sojae Kotaro Ito, Kenichiro Matsushima, and Yasuji Koyama Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Thermal Inactivation of Infectious Hepatitis E Virus in Experimentally Contaminated Food Elodie Barnaud, Sophie Rogée, Pascal Garry, Nicolas Rose, and Nicole Pavio Abstract Full Text PDF Figures

High-Pressure Inactivation of Human Norovirus Virus-Like Particles Provides Evidence that the Capsid of Human Norovirus Is Highly Pressure Resistant Fangfei Lou, Pengwei Huang, Hudaa Neetoo, Joshua B. Gurtler, Brendan A. Niemira, Haiqiang Chen, Xi Jiang, and Jianrong Li Abstract Full Text PDF Figures

Influence of Artisan Bakery- or Laboratory-Propagated Sourdoughs on the Diversity of Lactic Acid Bacterium and Yeast Microbiotas

Aquaculture Journals Page: 58 of 331

Aquaculture Journals – Table of Contents

Fabio Minervini, Anna Lattanzi, Maria De Angelis, Raffaella Di Cagno, and Marco Gobbetti Abstract Full Text PDF Figures Supplemental material

Effects of Subinhibitory Concentrations of Menthol on Adaptation, Morphological, and Gene Expression Changes in Enterohemorrhagic Escherichia coli Elad Landau and Roni Shapira Abstract Full Text PDF Figures

Microbiological and Physicochemical Characterization of Small-Scale Cocoa Fermentations and Screening of Yeast and Bacterial Strains To Develop a Defined Starter Culture Gilberto Vinícius de Melo Pereira, Maria Gabriela da Cruz Pedrozo Miguel, Cíntia Lacerda Ramos, and Rosane Freitas Schwan Abstract Full Text PDF Figures Supplemental material

Identification and Molecular Characterization of Class 1 Integrons in Multiresistant Escherichia coli Isolates from Poultry Litter Elizabeth Ponce-Rivas, María-Enriqueta Muñoz-Márquez, and Ashraf A. Khan Abstract Full Text PDF Figures

Involvement of Two-Component System CBO0366/CBO0365 in the Cold Shock Response and Growth of Group I (Proteolytic) Clostridium botulinum ATCC 3502 at Low Temperatures Miia Lindström, Elias Dahlsten, Henna Söderholm, Katja Selby, Panu Somervuo, John T. Heap, Nigel P. Minton, and Hannu Korkeala Abstract Full Text PDF Figures

Genetics and Molecular Biology

Fluorescence-Based Reporter for Gauging Cyclic Di-GMP Levels in Pseudomonas aeruginosa Morten T. Rybtke, Bradley R. Borlee, Keiji Murakami, Yasuhiko Irie, Morten Hentzer, Thomas E. Nielsen, Michael Givskov, Matthew R. Parsek, and Tim Tolker-Nielsen Abstract Full Text PDF Figures

Involvement of PatE, a Prophage-Encoded AraC-Like Regulator, in the Transcriptional Activation of Acid Resistance Pathways of Enterohemorrhagic Escherichia coli Strain EDL933 Jennifer K. Bender, Judyta Praszkier, Matthew J. Wakefield, Kathryn Holt, Marija Tauschek, Roy M. Robins-Browne, and Ji Yang Abstract Full Text PDF Figures Supplemental material

Influence of Adhesion and Bacteriocin Production by Lactobacillus salivarius on the Intestinal Epithelial Cell Transcriptional Response John O'Callaghan, Ludovica F. Buttó, John MacSharry, Kenneth Nally, and Paul W. O'Toole Abstract Full Text PDF Figures

A Conserved Two-Component Signal Transduction System Controls the Response to Phosphate Starvation in Bifidobacterium breve UCC2003 Pablo Alvarez-Martin, Matilde Fernández, Mary O'Connell-Motherway, Kerry Joan O'Connell, Nicolas Sauvageot, Gerald F. Fitzgerald, John MacSharry, Aldert Zomer, and Douwe van Sinderen Abstract Full Text PDF Figures Supplemental material Aquaculture Journals Page: 59 of 331

Aquaculture Journals – Table of Contents

Real-Time PCR Methodology for Selective Detection of Viable Escherichia coli O157:H7 Cells by Targeting Z3276 as a Genetic Marker Baoguang Li and Jin-Qiang Chen Abstract Full Text PDF Figures Supplemental material

Development of an Efficient In Vivo System (Pjunc-TpaseIS1223) for Random Transposon Mutagenesis of Lactobacillus casei Hélène Licandro-Seraut, Sophie Brinster, Maarten van de Guchte, Hélène Scornec, Emmanuelle Maguin, Philippe Sansonetti, Jean-François Cavin, and Pascale Serror Abstract Full Text PDF Figures

Invertebrate Microbiology

Decreased Toxicity of Bacillus thuringiensis subsp. israelensis to Mosquito Larvae after Contact with Leaf Litter Guillaume Tetreau, Renaud Stalinski, Dylann Kersusan, Sylvie Veyrenc, Jean-Philippe David, Stéphane Reynaud, and Laurence Després Abstract Full Text PDF Figures Supplemental material

Methods

A Straightforward DOPE (Double Labeling of Oligonucleotide Probes)-FISH (Fluorescence In Situ Hybridization) Method for Simultaneous Multicolor Detection of Six Microbial Populations Faris Behnam, Andreas Vilcinskas, Michael Wagner, and Kilian Stoecker Abstract Full Text PDF Figures

Proteomic Analysis of Bacillus thuringiensis at Different Growth Phases by Using an Automated Online Two-Dimensional Liquid Chromatography-Tandem Mass Spectrometry Strategy Shaoya Huang, Xuezhi Ding, Yunjun Sun, Qi Yang, Xiuqing Xiao, Zhenping Cao, and Liqiu Xia Abstract Full Text PDF Figures Supplemental material

One-Step Sequence- and Ligation-Independent Cloning as a Rapid and Versatile Cloning Method for Functional Genomics Studies Jae-Yeon Jeong, Hyung-Soon Yim, Ji-Young Ryu, Hyun Sook Lee, Jung-Hyun Lee, Dong- Seung Seen, and Sung Gyun Kang Abstract Full Text PDF Figures Supplemental material

Reclamation of Ampicillin Sensitivity for the Genetic Manipulation of Legionella pneumophila Molly C. Sutherland and Joseph P. Vogel Abstract Full Text PDF Figures Supplemental material

Microbial Ecology

Sensitive Quantification of Clostridium difficile Cells by Reverse Transcription- Quantitative PCR Targeting rRNA Molecules Kazunori Matsuda, Hirokazu Tsuji, Takashi Asahara, Takuya Takahashi, Hiroyuki Kubota, Satoru Nagata, Yuichiro Yamashiro, and Koji Nomoto Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 60 of 331

Aquaculture Journals – Table of Contents

Characterization of Geographically Distinct Bacterial Communities Associated with Coral Mucus Produced by Acropora spp. and Porites spp. B. A. McKew, A. J. Dumbrell, S. D. Daud, L. Hepburn, E. Thorpe, L. Mogensen, and C. Whitby Abstract Full Text PDF Figures Supplemental material

Patterns of [FeFe] Hydrogenase Diversity in the Gut Microbial Communities of Lignocellulose-Feeding Higher Termites Nicholas R. Ballor and Jared R. Leadbetter Abstract Full Text PDF Supplemental material

The Acyl Homoserine Lactone Receptor, SdiA, of Escherichia coli and Salmonella enterica Serovar Typhimurium Does Not Respond to Indole Anice Sabag-Daigle, Jitesh A. Soares, Jenée N. Smith, Mohamed E. Elmasry, and Brian M. M. Ahmer Abstract Full Text PDF Figures

Mycology

Development of a Tightly Regulatable Copper-Mediated Gene Switch System in Dermatophytes Atsushi Iwata, Mohamed Mahdi Alshahni, Yayoi Nishiyama, Koichi Makimura, Shigeru Abe, and Tsuyoshi Yamada Abstract Full Text PDF Figures

Predominance of a Versatile--Encoding Gene, mnp4, as Demonstrated by Gene Replacement via a Gene Targeting System for Pleurotus ostreatus Tomer M. Salame, Doriv Knop, Dana Tal, Dana Levinson, Oded Yarden, and Yitzhak Hadar Abstract Full Text PDF Figures

Physiology

Genetically Modified Strains of Ralstonia eutropha H16 with β-Ketothiolase Gene Deletions for Production of Copolyesters with Defined 3-Hydroxyvaleric Acid Contents Nicole Lindenkamp, Elena Volodina, and Alexander Steinbüchel Abstract Full Text PDF Figures

A Gain-of-Function Mutation in Gating of Corynebacterium glutamicum NCgl1221 Causes Constitutive Glutamate Secretion Yoshitaka Nakayama, Kenjiro Yoshimura, and Hidetoshi Iida Abstract Full Text PDF Figures

Archaeal Tetrathionate Hydrolase Goes Viral: Secretion of a Sulfur Metabolism Enzyme in the Form of Virus-Like Particles Mart Krupovic, Nuno Peixeiro, Marcus Bettstetter, Reinhard Rachel, and David Prangishvili Abstract Full Text PDF Figures Supplemental material

Plant Microbiology

Genome Sequence and Mutational Analysis of Plant-Growth-Promoting Bacterium Agrobacterium tumefaciens CCNWGS0286 Isolated from a Zinc- Lead Mine Tailing Aquaculture Journals Page: 61 of 331

Aquaculture Journals – Table of Contents

Xiuli Hao, Pin Xie, Laurel Johnstone, Susan J. Miller, Christopher Rensing, and Gehong Wei Abstract Full Text PDF Figures Supplemental material

Public Health Microbiology

Cold Atmospheric Air Plasma Sterilization against Spores and Other Microorganisms of Clinical Interest Tobias G. Klämpfl, Georg Isbary, Tetsuji Shimizu, Yang-Fang Li, Julia L. Zimmermann, Wilhelm Stolz, Jürgen Schlegel, Gregor E. Morfill, and Hans-Ulrich Schmidt Abstract Full Text PDF Figures

Relevance of Bacteroidales and F-Specific RNA Bacteriophages for Efficient Fecal Contamination Tracking at the Level of a Catchment in France Aourell Mauffret, Marie-Paule Caprais, and Michèle Gourmelon Abstract Full Text PDF Figures Supplemental material

Detection of Imported Wild Polioviruses and of Vaccine-Derived Polioviruses by Environmental Surveillance in Egypt Soile Blomqvist, Laila El Bassioni, Eman M. El Maamoon Nasr, Anja Paananen, Svetlana Kaijalainen, Humayun Asghar, Esther de Gourville, and Merja Roivainen Abstract Full Text PDF Figures

Author's Correction

Development of a Method To Produce Hemoglobin in a Bioreactor Culture of Escherichia coli BL21(DE3) Transformed with a Plasmid Containing Plesiomonas shigelloides Heme Transport Genes and Modified Human Hemoglobin Genes B. J. Z. Smith, P. Gutierrez, E. Guerrero, C. J. Brewer, and D. P. Henderson Full Text PDF Figures

Previous – Top – Next

VOLUME 78, PART 16, AUGUST 2012 Website

Research articles

Minireview

Quorum Sensing in the Context of Food Microbiology Panagiotis N. Skandamis and George-John E. Nychas Abstract Full Text PDF

Biotechnology

Engineering of a Xylose Metabolic Pathway in Rhodococcus Strains Xiaochao Xiong, Xi Wang, and Shulin Chen Abstract Full Text PDF Figures Supplemental material

Cofermentation of Glucose, Xylose, and Cellobiose by the Beetle-Associated Yeast Spathaspora passalidarum Tanya M. Long, Yi-Kai Su, Jennifer Headman, Alan Higbee, Laura B. Willis, and Thomas W. Jeffries

Aquaculture Journals Page: 62 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures Supplemental material

Directed Evolution of Xylose Isomerase for Improved Xylose Catabolism and Fermentation in the Yeast Saccharomyces cerevisiae Sun-Mi Lee, Taylor Jellison, and Hal S. Alper Abstract Full Text PDF Figures

Outer Membrane Protein AlkL Boosts Biocatalytic Oxyfunctionalization of Hydrophobic Substrates in Escherichia coli Mattijs K. Julsing, Manfred Schrewe, Sjef Cornelissen, Inna Hermann, Andreas Schmid, and Bruno Bühler Abstract Full Text PDF Figures Supplemental material

Differences in Substrate Specificities of Five Bacterial Ester Synthases Brett M. Barney, Bradley D. Wahlen, EmmaLee Garner, Jiashi Wei, and Lance C. Seefeldt Abstract Full Text PDF Figures Supplemental material

Surface Display of N-Terminally Anchored Invasin by Lactobacillus plantarum Activates NF-κB in Monocytes Lasse Fredriksen, Charlotte R. Kleiveland, Lene T. Olsen Hult, Tor Lea, Cathrine S. Nygaard, Vincent G. H. Eijsink, and Geir Mathiesen Abstract Full Text PDF Figures

White Mutants of Chloroperoxidase-Secreting Caldariomyces fumago as Superior Production Strains, Revealing an Interaction between Pigmentation and Enzyme Secretion Markus Buchhaupt, Sonja Hüttmann, and Jens Schrader Abstract Full Text PDF Figures Supplemental material

Biodiesel Production by the Green Microalga Scenedesmus obliquus in a Recirculatory Aquaculture System Shovon Mandal and Nirupama Mallick Abstract Full Text PDF Figures

Cloning, Production, and Functional Expression of the Bacteriocin Enterocin A, Produced by Enterococcus faecium T136, by the Yeasts Pichia pastoris, Kluyveromyces lactis, Hansenula polymorpha, and Arxula adeninivorans Juan Borrero, Gotthard Kunze, Juan J. Jiménez, Erik Böer, Loreto Gútiez, Carmen Herranz, Luis M. Cintas, and Pablo E. Hernández Abstract Full Text PDF Figures

Environmental Microbiology

Arcobacter in Lake Erie Beach Waters: an Emerging Gastrointestinal Pathogen Linked with Human-Associated Fecal Contamination Cheonghoon Lee, Senyo Agidi, Jason W. Marion, and Jiyoung Lee Abstract Full Text PDF Figures

Two Genera of Magnetococci with Bean-like Morphology from Intertidal Sediments of the Yellow Sea, China Wen-Yan Zhang, Ke Zhou, Hong-Miao Pan, Hai-Dong Yue, Ming Jiang, Tian Xiao, and Long- Fei Wu Abstract Full Text PDF Figures

Aquaculture Journals Page: 63 of 331

Aquaculture Journals – Table of Contents

Involvement of RpoN in Regulating Bacterial Arsenite Oxidation Yoon-Suk Kang, Brian Bothner, Christopher Rensing, and Timothy R. McDermott Abstract Full Text PDF Figures

Longitudinal Study of the Contamination of Air and of Soil Surfaces in the Vicinity of Pig Barns by Livestock-Associated Methicillin-Resistant Staphylococcus aureus Jochen Schulz, Anika Friese, Sylvia Klees, Bernd A. Tenhagen, Alexandra Fetsch, Uwe Rösler, and Jörg Hartung Abstract Full Text PDF Supplemental material OPEN ACCESS

New Molecular Quantitative PCR Assay for Detection of Host-Specific Bifidobacteriaceae Suitable for Microbial Source Tracking Marta Gómez-Doñate, Elisenda Ballesté, Maite Muniesa, and Anicet R. Blanch Abstract Full Text PDF Figures

Diurnal Infection Patterns and Impact of Microcystis Cyanophages in a Japanese Pond Shigeko Kimura, Takashi Yoshida, Naohiko Hosoda, Takashi Honda, Sotaro Kuno, Rikae Kamiji, Ryoya Hashimoto, and Yoshihiko Sako Abstract Full Text PDF Figures Supplemental material

Stability and Infectivity of Cytolethal Distending Toxin Type V Gene-Carrying Bacteriophages in a Water Mesocosm and under Different Inactivation Conditions Anna Allué-Guardia, Juan Jofre, and Maite Muniesa Abstract Full Text PDF Figures

Pyrosequencing-Derived Bacterial, Archaeal, and Fungal Diversity of Spacecraft Hardware Destined for Mars Myron T. La Duc, Parag Vaishampayan, Henrik R. Nilsson, Tamas Torok, and Kasthuri Venkateswaran Abstract Full Text PDF Figures Supplemental material

Two SusD-Like Proteins Encoded within a Polysaccharide Utilization Locus of an Uncultured Ruminant Phylotype Bind Strongly to Cellulose A. K. Mackenzie, P. B. Pope, H. L. Pedersen, R. Gupta, M. Morrison, W. G. T. Willats, and V. G. H. Eijsink Abstract Full Text PDF Figures

Electrical Conductivity in a Mixed-Species Biofilm Nikhil S. Malvankar, Joanne Lau, Kelly P. Nevin, Ashley E. Franks, Mark T. Tuominen, and Derek R. Lovley Abstract Full Text PDF Figures Supplemental material

Enzymology and Protein Engineering

A Novel Glycosylphosphatidylinositol-Anchored Glycoside Hydrolase from Ustilago esculenta Functions in β-1,3-Glucan Degradation Masahiro Nakajima, Tetsuro Yamashita, Machiko Takahashi, Yuki Nakano, and Takumi Takeda Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 64 of 331

Aquaculture Journals – Table of Contents

Enhancement of the Structural Stability of Full-Length Clostridial Collagenase by Calcium Ions Naomi Ohbayashi, Noriko Yamagata, Masafumi Goto, Kimiko Watanabe, Youhei Yamagata, and Kazutaka Murayama Abstract Full Text PDF Figures

Evolutionary and Genomic Microbiology

Effects of Sequential and Simultaneous Applications of Bacteriophages on Populations of Pseudomonas aeruginosa In Vitro and in Wax Moth Larvae Alex R. Hall, Daniel De Vos, Ville-Petri Friman, Jean-Paul Pirnay, and Angus Buckling Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Association of Campylobacter jejuni Metabolic Traits with Multilocus Sequence Types Caroline P. A. de Haan, Ann-Katrin Llarena, Joana Revez, and Marja-Liisa Hänninen Abstract Full Text PDF Figures Supplemental material

High-Throughput Sequencing for Detection of Subpopulations of Bacteria Not Previously Associated with Artisanal Cheeses Lisa Quigley, Orla O'Sullivan, Tom P. Beresford, R. Paul Ross, Gerald F. Fitzgerald, and Paul D. Cotter Abstract Full Text PDF Figures Supplemental material

Two-Year Systematic Study To Assess Norovirus Contamination in Oysters from Commercial Harvesting Areas in the United Kingdom James A. Lowther, Nicole E. Gustar, Andrew L. Powell, Rachel E. Hartnell, and David N. Lees Abstract Full Text PDF Figures

Real-Time PCR Detection of Paenibacillus spp. in Raw Milk To Predict Shelf Life Performance of Pasteurized Fluid Milk Products Matthew L. Ranieri, Reid A. Ivy, W. Robert Mitchell, Emma Call, Stephanie N. Masiello, Martin Wiedmann, and Kathryn J. Boor Abstract Full Text PDF Figures Supplemental material

Influence of the Plant Defense Response to Escherichia coli O157:H7 Cell Surface Structures on Survival of That Enteric Pathogen on Plant Surfaces Suengwook Seo and Karl R. Matthews Abstract Full Text PDF Figures

Genetics and Molecular Biology

Genotypic and Chemotypic Diversity of Neotyphodium Endophytes in Tall Fescue from Greece Johanna E. Takach, Shipra Mittal, Ginger A. Swoboda, Sherrita K. Bright, Michael A. Trammell, Andrew A. Hopkins, and Carolyn A. Young Abstract Full Text PDF Figures Supplemental material OPEN ACCESS

Two Gene Clusters Coordinate Galactose and Lactose Metabolism in Streptococcus gordonii Lin Zeng, Nicole C. Martino, and Robert A. Burne Aquaculture Journals Page: 65 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

A Specific Mutation in the Promoter Region of the Silent cel Cluster Accounts for the Appearance of Lactose-Utilizing Lactococcus lactis MG1363 Ana Solopova, Herwig Bachmann, Bas Teusink, Jan Kok, Ana Rute Neves, and Oscar P. Kuipers Abstract Full Text PDF Figures Supplemental material

Respiratory Chain Analysis of Zymomonas mobilis Mutants Producing High Levels of Ethanol Takeshi Hayashi, Tsuyoshi Kato, and Kensuke Furukawa Abstract Full Text PDF Figures Supplemental material

Genotypic and Phenotypic Traits That Distinguish Neonatal Meningitis- Associated Escherichia coli from Fecal E. coli Isolates of Healthy Human Hosts Catherine M. Logue, Curt Doetkott, Paul Mangiamele, Yvonne M. Wannemuehler, Timothy J. Johnson, Kelly A. Tivendale, Ganwu Li, Julie S. Sherwood, and Lisa K. Nolan Abstract Full Text PDF Figures Supplemental material

Fratricide Is Essential for Efficient Gene Transfer between Pneumococci in Biofilms Hua Wei and Leiv Sigve Håvarstein Abstract Full Text PDF Figures

Exploiting a Natural Auxotrophy for Genetic Selection Elizabeth Ramage, Larry Gallagher, and Colin Manoil Abstract Full Text PDF Figures Supplemental material

Expansion of a Plasmid Classification System for Gram-Positive Bacteria and Determination of the Diversity of Plasmids in Staphylococcus aureus Strains of Human, Animal, and Food Origins Carmen Lozano, Lourdes García-Migura, Carmen Aspiroz, Myriam Zarazaga, Carmen Torres, and Frank Møller Aarestrup Abstract Full Text PDF Supplemental material

Geomicrobiology

Actinobacterial Nitrate Reducers and Proteobacterial Denitrifiers Are Abundant in N2O-Metabolizing Palsa Peat Katharina Palmer and Marcus A. Horn Abstract Full Text PDF Figures Supplemental material

Microbial Lithotrophic Oxidation of Structural Fe(II) in Biotite Evgenya Shelobolina, Huifang Xu, Hiromi Konishi, Ravi Kukkadapu, Tao Wu, Marco Blöthe, and Eric Roden Abstract Full Text PDF Figures Supplemental material

Invertebrate Microbiology

Association of Cry1Ac Toxin Resistance in Helicoverpa zea (Boddie) with Increased Alkaline Phosphatase Levels in the Midgut Lumen Silvia Caccia, William J. Moar, Jayadevi Chandrashekhar, Cris Oppert, Konasale J. Anilkumar, Juan Luis Jurat-Fuentes, and Juan Ferré

Aquaculture Journals Page: 66 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

Association of a New Wolbachia Strain with, and Its Effects on, Leptopilina victoriae, a Virulent Wasp Parasitic to Drosophila spp. Gwenaelle Gueguen, Bodunde Onemola, and Shubha Govind Abstract Full Text PDF Figures

Methods

Development of a Direct Isolation Procedure for Free-Living Diazotrophs under Controlled Hypoxic Conditions Babur S. Mirza and Jorge L. M. Rodrigues Abstract Full Text PDF Figures Supplemental material

Raman Spectroscopy as a Potential Tool for Detection of Brucella spp. in Milk Susann Meisel, Stephan Stöckel, Mandy Elschner, Falk Melzer, Petra Rösch, and Jürgen Popp Abstract Full Text PDF Figures Supplemental material

A Synthetic Arabinose-Inducible Promoter Confers High Levels of Recombinant Protein Expression in Hyperthermophilic Archaeon Sulfolobus islandicus Nan Peng, Ling Deng, Yuxia Mei, Dongqing Jiang, Yongmei Hu, Mariana Awayez, Yunxiang Liang, and Qunxin She Abstract Full Text PDF Figures Supplemental material

Positive Regulation of Leptospira interrogans kdp Expression by KdpE as Demonstrated with a Novel β-Galactosidase Reporter in Leptospira biflexa James Matsunaga and Mariana L. Coutinho Abstract Full Text PDF Figures

Development and Application of an Arabinose-Inducible Expression System by Facilitating Inducer Uptake in Corynebacterium glutamicum Yun Zhang, Xiuling Shang, Shujuan Lai, Guoqiang Zhang, Yong Liang, and Tingyi Wen Abstract Full Text PDF Figures Supplemental material

Capturing Greater 16S rRNA Gene Sequence Diversity within the Domain Bacteria T. Winsley, J. M. van Dorst, M. V. Brown, and B. C. Ferrari Abstract Full Text PDF Figures Supplemental material

Application of pheB as a Reporter Gene for Geobacillus spp., Enabling Qualitative Colony Screening and Quantitative Analysis of Promoter Strength Jeremy Bartosiak-Jentys, Kirstin Eley, and David J. Leak Abstract Full Text PDF Figures Supplemental material

Microbial Ecology

Denaturing Gradient Gel Electrophoresis and Barcoded Pyrosequencing Reveal Unprecedented Archaeal Diversity in Mangrove Sediment and Rhizosphere Samples Ana C. C. Pires, Daniel F. R. Cleary, Adelaide Almeida, Ângela Cunha, Simone Dealtry, Leda C. S. Mendonça-Hagler, Kornelia Smalla, and Newton C. M. Gomes Abstract Full Text PDF Figures

Aquaculture Journals Page: 67 of 331

Aquaculture Journals – Table of Contents

Transovarial Transmission of Rickettsia spp. and Organ-Specific Infection of the Whitefly Bemisia tabaci Marina Brumin, Maggie Levy, and Murad Ghanim Abstract Full Text PDF Figures

Seasonal Diversity of Planktonic Protists in Southwestern Alberta Rivers over a 1-Year Period as Revealed by Terminal Restriction Fragment Length Polymorphism and 18S rRNA Gene Library Analyses Matthew C. Thomas, L. Brent Selinger, and G. Douglas Inglis Abstract Full Text PDF Figures

Higher-Level Production of Volatile Fatty Acids In Vitro by Chicken Gut Microbiotas than by Human Gut Microbiotas as Determined by Functional Analyses Fang Lei, Yeshi Yin, Yuezhu Wang, Bo Deng, Hongwei David Yu, Lanjuan Li, Charlie Xiang, Shengyue Wang, Baoli Zhu, and Xin Wang Abstract Full Text PDF Figures Supplemental material

Ecophysiological Characterization of Ammonia-Oxidizing Archaea and Bacteria from Freshwater Elizabeth French, Jessica A. Kozlowski, Maitreyee Mukherjee, George Bullerjahn, and Annette Bollmann Abstract Full Text PDF Figures Supplemental material

Archaeal Abundance across a pH Gradient in an Arable Soil and Its Relationship to Bacterial and Fungal Growth Rates Per Bengtson, Anna E. Sterngren, and Johannes Rousk Abstract Full Text PDF Figures

Mycology

Expression of the Laccase Gene from a White Rot Fungus in Pichia pastoris Can Enhance the Resistance of This Yeast to H2O2-Mediated Oxidative Stress by Stimulating the Glutathione-Based Antioxidative System Yang Yang, Fangfang Fan, Rui Zhuo, Fuying Ma, Yangmin Gong, Xia Wan, Mulan Jiang, and Xiaoyu Zhang Abstract Full Text PDF Figures

Physiology

Synthesis, Release, and Recapture of Compatible Solute Proline by Osmotically Stressed Bacillus subtilis Cells Tamara Hoffmann, Carsten von Blohn, Agnieszka Stanek, Susanne Moses, Helena Barzantny, and Erhard Bremer Abstract Full Text PDF Figures

Phenylacetic Acid Catabolism and Its Transcriptional Regulation in Corynebacterium glutamicum Xi Chen, Thomas A. Kohl, Christian Rückert, Dmitry A. Rodionov, Ling-Hao Li, Jiu-Yuan Ding, Jörn Kalinowski, and Shuang-Jiang Liu Abstract Full Text PDF Figures Supplemental material

Fluid Flow Induces Biofilm Formation in Staphylococcus epidermidis Polysaccharide Intracellular Adhesin-Positive Clinical Isolates Aquaculture Journals Page: 68 of 331

Aquaculture Journals – Table of Contents

Westbrook M. Weaver, Vladana Milisavljevic, Jeff F. Miller, and Dino Di Carlo Abstract Full Text PDF Figures Supplemental material

Plant Microbiology

Forward Genetic In Planta Screen for Identification of Plant-Protective Traits of Sphingomonas sp. Strain Fr1 against Pseudomonas syringae DC3000 Christine Vogel, Gerd Innerebner, Judith Zingg, Jan Guder, and Julia A. Vorholt Abstract Full Text PDF Figures Supplemental material

The Novel Kasugamycin 2′-N-Acetyltransferase Gene aac(2′)-IIa, Carried by the IncP Island, Confers Kasugamycin Resistance to Rice-Pathogenic Bacteria Atsushi Yoshii, Hiromitsu Moriyama, and Toshiyuki Fukuhara Abstract Full Text PDF Figures Supplemental material

Ketoglutarate Transport Protein KgtP Is Secreted through the Type III Secretion System and Contributes to Virulence in Xanthomonas oryzae pv. oryzae Wei Guo, Lu-Lu Cai, Hua-Song Zou, Wen-Xiu Ma, Xi-Ling Liu, Li-Fang Zou, Yu-Rong Li, Xiao-Bin Chen, and Gong-You Chen Abstract Full Text PDF Figures Supplemental material

Antifungal Activity of Bacillus amyloliquefaciens NJN-6 Volatile Compounds against Fusarium oxysporum f. sp. cubense Jun Yuan, Waseem Raza, Qirong Shen, and Qiwei Huang Abstract Full Text PDF Figures Supplemental material

Public Health Microbiology

Pathogenic Escherichia coli Found in Sewage Treatment Plants and Environmental Waters E. M. Anastasi, B. Matthews, H. M. Stratton, and M. Katouli Abstract Full Text PDF Supplemental material

Experimental Inoculation of Male Rats with Coxiella burnetii: Successful Infection but No Transmission to Cage Mates Marieke Opsteegh, Lenny Hogerwerf, Stephane Nooijen, Cecile Dam-Deisz, Lianne de Heer, Chantal Reusken, Annemarie Bouma, Hendrik-Jan Roest, Mirjam Nielen, and Joke van der Giessen Abstract Full Text PDF Figures Supplemental material

Effects of Relative Humidity and Spraying Medium on UV Decontamination of Filters Loaded with Viral Aerosols Myung-Heui Woo, Adam Grippin, Diandra Anwar, Tamara Smith, Chang-Yu Wu, and Joseph D. Wander Abstract Full Text PDF Figures

Impact of Processing Method on Recovery of Bacteria from Wipes Used in Biological Surface Sampling Autumn S. Downey, Sandra M. Da Silva, Nathan D. Olson, James J. Filliben, and Jayne B. Morrow Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 69 of 331

Aquaculture Journals – Table of Contents

Erratum

Molecular Identification and Characterization of a New Type of Bovine Enterovirus Shahzad Shaukat, Mehar Angez, Muhammad Masroor Alam, Salmaan Sharif, Adnan Khurshid, Farzana Malik, Muhammad Suleman Rana, Tariq Mahmood, and Syed Sohail Zahoor Zaidi Appl. Environ. Microbiol. August 2012 78:5972; doi:10.1128/AEM.01729-12 Full Text PDF Previous – Top – Next

VOLUME 78, PART 17, SEPTEMBER 2012 Website

Research articles

Biodegradation

Novel Dehalogenase Mechanism for 2,3-Dichloro-1-Propanol Utilization in Pseudomonas putida Strain MC4 Muhammad Irfan Arif, Ghufrana Samin, Jan G. E. van Leeuwen, Jantien Oppentocht, and Dick B. Janssen Abstract Full Text PDF Figures Supplemental material

Biotechnology

Identification and Biochemical Evidence of a Medium-Chain-Length Polyhydroxyalkanoate Depolymerase in the Bdellovibrio bacteriovorus Predatory Hydrolytic Arsenal Virginia Martínez, Fernando de la Peña, Javier García-Hidalgo, Isabel de la Mata, José Luis García, and María Auxiliadora Prieto Abstract Full Text PDF Figures Supplemental material

Evaluation of Gene Modification Strategies for the Development of Low- Alcohol-Wine Yeasts C. Varela, D. R. Kutyna, M. R. Solomon, C. A. Black, A. Borneman, P. A. Henschke, I. S. Pretorius, and P. J. Chambers Abstract Full Text PDF Figures

Biotechnological Production of Caffeic Acid by Bacterial Cytochrome P450 CYP199A2 Toshiki Furuya, Yuka Arai, and Kuniki Kino Abstract Full Text PDF Figures Supplemental material

Production of Aromatic Compounds by Metabolically Engineered Escherichia coli with an Expanded Shikimate Pathway Daisuke Koma, Hayato Yamanaka, Kunihiko Moriyoshi, Takashi Ohmoto, and Kiyofumi Sakai Abstract Full Text PDF Figures

Synthesis of Short-Chain Diols and Unsaturated Alcohols from Secondary Alcohol Substrates by the Rieske Nonheme Mononuclear Iron Oxygenase MdpJ Franziska Schäfer, Judith Schuster, Birgit Würz, Claus Härtig, Hauke Harms, Roland H. Müller, and Thore Rohwerder Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 70 of 331

Aquaculture Journals – Table of Contents

The Tape Measure Protein of the Staphylococcus aureus Bacteriophage vB_SauS-phiIPLA35 Has an Active Muramidase Domain Lorena Rodríguez-Rubio, Dolores Gutiérrez, Beatriz Martínez, Ana Rodríguez, Friedrich Götz, and Pilar García Abstract Full Text PDF Figures

Environmental Microbiology

Prophage Carriage and Diversity within Clinically Relevant Strains of Clostridium difficile Jinyu Shan, Krusha V. Patel, Peter T. Hickenbotham, Janet Y. Nale, Katherine R. Hargreaves, and Martha R. J. Clokie Abstract Full Text PDF Figures Supplemental material

Host Preferences of Arbuscular Mycorrhizal Fungi Colonizing Annual Herbaceous Plant Species in Semiarid Mediterranean Prairies E. Torrecillas, M. M. Alguacil, and A. Roldán Abstract Full Text PDF Figures

Inactivation of Chloramphenicol and Florfenicol by a Novel Chloramphenicol Hydrolase Weixin Tao, Myung Hwan Lee, Jing Wu, Nam Hee Kim, Jin-Cheol Kim, Eunsook Chung, Eul Chul Hwang, and Seon-Woo Lee Abstract Full Text PDF Figures

Determination of Whether Quorum Quenching Is a Common Activity in Marine Bacteria by Analysis of Cultivable Bacteria and Metagenomic Sequences Manuel Romero, Ana-Belen Martin-Cuadrado, and Ana Otero Abstract Full Text PDF Figures Supplemental material

Pseudomonas aeruginosa Bacteriophage PA1Ø Requires Type IV Pili for Infection and Shows Broad Bactericidal and Biofilm Removal Activities Shukho Kim, Marzia Rahman, Sung Yong Seol, Sang Sun Yoon, and Jungmin Kim Abstract Full Text PDF Figures

Evolutionary and Genomic Microbiology

Two Boundaries Separate Borrelia burgdorferi Populations in North America Gabriele Margos, Jean I. Tsao, Santiago Castillo-Ramírez, Yvette A. Girard, Sarah A. Hamer, Anne Gatewood Hoen, Robert S. Lane, Steve L. Raper,and Nicholas H. Ogden Abstract Full Text PDF Figures Supplemental material

Multidrug Therapy and Evolution of Antibiotic Resistance: When Order Matters Gabriel G. Perron, Sergey Kryazhimskiy, Daniel P. Rice, and Angus Buckling Abstract Full Text PDF Figures

Genetic Diversity, Symbiotic Evolution, and Proposed Infection Process of Bradyrhizobium Strains Isolated from Root Nodules of Aeschynomene americana L. in Thailand Rujirek Noisangiam, Kamonluck Teamtisong, Panlada Tittabutr, Nantakorn Boonkerd, Uchiumi Toshiki, Kiwamu Minamisawa, and Neung Teaumroong Abstract Full Text PDF Figures Supplemental material Aquaculture Journals Page: 71 of 331

Aquaculture Journals – Table of Contents

The Bacterium Pantoea stewartii Uses Two Different Type III Secretion Systems To Colonize Its Plant Host and Insect Vector Valdir R. Correa, Doris R. Majerczak, El-Desouky Ammar, Massimo Merighi, Richard C. Pratt, Saskia A. Hogenhout, David L. Coplin, and Margaret G. Redinbaugh Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Identification and Characterization of Cronobacter Iron Acquisition Systems C. J. Grim, M. H. Kothary, G. Gopinath, K. G. Jarvis, J. Jean-Gilles Beaubrun, M. McClelland, B. D. Tall, and A. A. Franco Abstract Full Text PDF Figures Supplemental material

Alternative Approach To Modeling Bacterial Lag Time, Using Logistic Regression as a Function of Time, Temperature, pH, and Sodium Chloride Concentration Shige Koseki and Junko Nonaka Abstract Full Text PDF Figures

Internalization and Dissemination of Human Norovirus and Animal Caliciviruses in Hydroponically Grown Romaine Lettuce Erin DiCaprio, Yuanmei Ma, Anastasia Purgianto, John Hughes, and Jianrong Li Abstract Full Text PDF Figures

Internalization of Sapovirus, a Surrogate for Norovirus, in Romaine Lettuce and the Effect of Lettuce Latex on Virus Infectivity Malak A. Esseili, Qiuhong Wang, Zhenwen Zhang, and Linda J. Saif Abstract Full Text PDF Figures

Dual-Serotype Biofilm Formation by Shiga Toxin-Producing Escherichia coli O157:H7 and O26:H11 Strains Rong Wang, Norasak Kalchayanand, James L. Bono, John W. Schmidt, and Joseph M. Bosilevac Abstract Full Text PDF

Accumulation of Intracellular Glycogen and Trehalose by Propionibacterium freudenreichii under Conditions Mimicking Cheese Ripening in the Cold Marion Dalmasso, Julie Aubert, Sergine Even, Hélène Falentin, Marie-Bernadette Maillard, Sandrine Parayre, Valentin Loux, Jarna Tanskanen, and Anne Thierry Abstract Full Text PDF Figures

Genetics and Molecular Biology

The TetR-Type Transcriptional Repressor RolR from Corynebacterium glutamicum Regulates Resorcinol Catabolism by Binding to a Unique Operator, rolO Tang Li, Kexin Zhao, Yan Huang, Defeng Li, Cheng-Ying Jiang, Nan Zhou, Zheng Fan, and Shuang-Jiang Liu Abstract Full Text PDF Figures Supplemental material

The Physiological Opportunism of Desulfitobacterium hafniense Strain TCE1 towards Organohalide Respiration with Tetrachloroethene

Aquaculture Journals Page: 72 of 331

Aquaculture Journals – Table of Contents

Aurélie Duret, Christof Holliger, and Julien Maillard Abstract Full Text PDF Figures Supplemental material

Serratia marcescens Quinoprotein Glucose Dehydrogenase Activity Mediates Medium Acidification and Inhibition of Prodigiosin Production by Glucose James E. Fender, Cody M. Bender, Nicholas A. Stella, Roni M. Lahr, Eric J. Kalivoda, and Robert M. Q. Shanks Abstract Full Text PDF Figures Supplemental material

Invertebrate Microbiology

Novel Mutations Associated with Resistance to Bacillus sphaericus in a Polymorphic Region of the Culex quinquefasciatus cqm1 Gene Karlos Diogo de Melo Chalegre, Tatiany Patrícia Romão, Daniella Aliny Tavares, Eloína Mendonça Santos, Lígia Maria Ferreira, Cláudia Maria Fontes Oliveira, Osvaldo Pompílio de- Melo-Neto, and Maria Helena Neves Lobo Silva-Filha Abstract Full Text PDF Figures Supplemental material

Methods

Chromosomal Complementation Using Tn7 Transposon Vectors in Enterobacteriaceae Sébastien Crépin, Josée Harel, and Charles M. Dozois Abstract Full Text PDF Figures

Quantification of Gene Expression in the Sea by Selecting Uniformly Transcribed mRNA as the Basis for Normalization Lee-Kuo Kang, Feng-Hsiu Tsui, and Jeng Chang Abstract Full Text PDF Figures

Enumerating Viruses in Coral Mucus Amandine Leruste, Thierry Bouvier, and Yvan Bettarel Abstract Full Text PDF Figures

Microbial Ecology

Comparative Survey of Rumen Microbial Communities and Metabolites across One Caprine and Three Bovine Groups, Using Bar-Coded Pyrosequencing and 1H Nuclear Magnetic Resonance Spectroscopy Hyo Jung Lee, Ji Young Jung, Young Kyoon Oh, Sang-Suk Lee, Eugene L. Madsen, and Che Ok Jeon Abstract Full Text PDF Figures Supplemental material

Firing Range Soils Yield a Diverse Array of Fungal Isolates Capable of Organic Acid Production and Pb Mineral Solubilization Tarah S. Sullivan, Neil R. Gottel, Nicholas Basta, Philip M. Jardine, and Christopher W. Schadt Abstract Full Text PDF Figures

Consumption of Lysozyme-Rich Milk Can Alter Microbial Fecal Populations Elizabeth A. Maga, Prerak T. Desai, Bart C. Weimer, Nguyet Dao, Dietmar Kültz, and James D. Murray Abstract Full Text PDF Figures Supplemental material

Aquaculture Journals Page: 73 of 331

Aquaculture Journals – Table of Contents

Methanogenic Population and CH4 Production in Swedish Dairy Cows Fed Different Levels of Forage R. Danielsson, A. Schnürer, V. Arthurson, and J. Bertilsson Abstract Full Text PDF Figures OPEN ACCESS

Distance-Decay Relationships Partially Determine Diversity Patterns of Phyllosphere Bacteria on Tamrix Trees across the Sonoran Desert Omri M. Finkel, Adrien Y. Burch, Tal Elad, Susan M. Huse, Steven E. Lindow, Anton F. Post, and Shimshon Belkin Abstract Full Text PDF Figures Supplemental material

Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly Joanne B. Emerson, Brian C. Thomas, Karen Andrade, Eric E. Allen, Karla B. Heidelberg, and Jillian F. Banfield Abstract Full Text PDF Figures Supplemental material

Emergent Macrophytes Act Selectively on Ammonia-Oxidizing Bacteria and Archaea Rosalia Trias, Olaya Ruiz-Rueda, Arantzazu García-Lledó, Ariadna Vilar-Sanz, Rocío López- Flores, Xavier D. Quintana, Sara Hallin, and Lluís Bañeras Abstract Full Text PDF Figures Supplemental material

Methane-Cycling Microbial Communities and Methane Emission in Natural and Restored Peatlands Heli Juottonen, Anu Hynninen, Mika Nieminen, Tero T. Tuomivirta, Eeva-Stiina Tuittila, Hannu Nousiainen, Dana K. Kell, Kim Yrjälä, Arja Tervahauta, and Hannu Fritze Abstract Full Text PDF Figures Supplemental material

Microbial Survey of a Full-Scale, Biologically Active Filter for Treatment of Drinking Water Colin P. White, Ronald W. DeBry, and Darren A. Lytle Abstract Full Text PDF Figures

Mycology

Characterization of the Two Neurospora crassa Cellobiose Dehydrogenases and Their Connection to Oxidative Cellulose Degradation Christoph Sygmund, Daniel Kracher, Stefan Scheiblbrandner, Kawah Zahma, Alfons K. G. Felice, Wolfgang Harreither, Roman Kittl, and Roland Ludwig Abstract Full Text PDFFigures Supplemental material

Microsatellite Markers for Characterization of Native and Introduced Populations of Plasmopara viticola, the Causal Agent of Grapevine Downy Mildew Mélanie Rouxel, Daciana Papura, Marilise Nogueira, Virginie Machefer, Damien Dezette, Sylvie Richard-Cervera, Sébastien Carrere, Pere Mestre, and François Delmotte Abstract Full Text PDF Supplemental material

Physiology

MhbT Is a Specific Transporter for 3-Hydroxybenzoate Uptake by Gram- Negative Bacteria Aquaculture Journals Page: 74 of 331

Aquaculture Journals – Table of Contents

Ying Xu, Xiaoli Gao, Song-He Wang, Hong Liu, Peter A. Williams, and Ning-Yi Zhou Abstract Full Text PDF Figures Supplemental material

Epimerase (Msed_0639) and Mutase (Msed_0638 and Msed_2055) Convert (S)- Methylmalonyl-Coenzyme A (CoA) to Succinyl-CoA in the Metallosphaera sedula 3-Hydroxypropionate/4-Hydroxybutyrate Cycle Yejun Han, Aaron S. Hawkins, Michael W. W. Adams, and Robert M. Kelly Abstract Full Text PDF Figures Supplemental material

Membrane Vesicle Formation as a Multiple-Stress Response Mechanism Enhances Pseudomonas putida DOT-T1E Cell Surface Hydrophobicity and Biofilm Formation Thomas Baumgarten, Stefanie Sperling, Jana Seifert, Martin von Bergen, Frank Steiniger, Lukas Y. Wick, and Hermann J. Heipieper Abstract Full Text PDF Figures Supplemental material

Peculiar H+ Homeostasis of Saccharomyces cerevisiae during the Late Stages of Wine Fermentation Tiago Viana, Maria C. Loureiro-Dias, Virgílio Loureiro, and Catarina Prista Abstract Full Text PDF Figures

Reduction of Photoautotrophic Productivity in the Cyanobacterium Synechocystis sp. Strain PCC 6803 by Phycobilisome Antenna Truncation Lawrence E. Page, Michelle Liberton, and Himadri B. Pakrasi Abstract Full Text PDF Figures

Chemotaxis to Furan Compounds by Furan-Degrading Pseudomonas Strains Nancy N. Nichols, Tristan A. Lunde, Kevin C. Graden, Kate A. Hallock, Cara K. Kowalchyk, Rebecca M. Southern, Ellen J. Soskin, and Jayna L. Ditty Abstract Full Text PDF Figures

Differential In Vivo Gene Expression of Major Leptospira Proteins in Resistant or Susceptible Animal Models Mariko Matsui, Marie-Estelle Soupé, Jérôme Becam, and Cyrille Goarant Abstract Full Text PDF Figures

Plant Microbiology

Lon Protease of Azorhizobium caulinodans ORS571 Is Required for Suppression of reb Gene Expression Azusa Nakajima, Toshihiro Aono, Shuhei Tsukada, Lowela Siarot, Tetsuhiro Ogawa, and Hiroshi Oyaizu Abstract Full Text PDF Figures Supplemental material

Public Health Microbiology

Relationship between Enterococcal Levels and Sediment Biofilms at Recreational Beaches in South Florida Alan M. Piggot, James S. Klaus, Sara Johnson, Matthew C. Phillips, and Helena M. Solo- Gabriele Abstract Full Text PDF Figures

Aquaculture Journals Page: 75 of 331

Aquaculture Journals – Table of Contents

Transport of Cryptosporidium parvum Oocysts in Soil Columns following Applications of Raw and Separated Liquid Slurries Heidi H. Petersen, Heidi L. Enemark, Annette Olsen, M. G. Mostofa Amin, and Anders Dalsgaard Abstract Full Text PDF Figures

Metagenomic Analyses of Drinking Water Receiving Different Disinfection Treatments Vicente Gomez-Alvarez, Randy P. Revetta, and Jorge W. Santo Domingo Abstract Full Text PDF Figures Supplemental material

Upper Respiratory Tract Microbial Communities, Acute Otitis Media Pathogens, and Antibiotic Use in Healthy and Sick Children Melinda M. Pettigrew, Alison S. Laufer, Janneane F. Gent, Yong Kong, Kristopher P. Fennie, and Joshua P. Metlay Abstract Full Text PDF Figures

Molecular Survey of the Occurrence of Legionella spp., Mycobacterium spp., Pseudomonas aeruginosa, and Amoeba Hosts in Two Chloraminated Drinking Water Distribution Systems Hong Wang, Marc Edwards, Joseph O. Falkinham III, and Amy Pruden Abstract Full Text PDF Figures Supplemental material

Erratum

Genome-Based Cluster Deletion Reveals an Endocrocin Biosynthetic Pathway in Aspergillus fumigatus Fang Yun Lim, Yanpeng Hou, Yiming Chen, Jee-Hwan Oh, Inhyung Lee, Tim S. Bugni, and Nancy P. Keller Appl. Environ. Microbiol. September 2012 78:6395; doi:10.1128/AEM.01926-12 Full Text PDF Previous – Top – Next

VOLUME 78, PART 18, SEPTEMBER 2012 Website

Research articles

Minireview

Bioremediation and Tolerance of Humans to Heavy Metals through Microbial Processes: a Potential Role for Probiotics? Marc Monachese, Jeremy P. Burton, and Gregor Reid Abstract Full Text PDF Author Bios

Biotechnology

Exploring the Natural Fungal Biodiversity of Tropical and Temperate Forests toward Improvement of Biomass Conversion Jean-Guy Berrin, David Navarro, Marie Couturier, Caroline Olivé, Sacha Grisel, Mireille Haon, Sabine Taussac, Christian Lechat, Régis Courtecuisse, Anne Favel, Pedro M. Coutinho, and Laurence Lesage-Meessen Abstract Full Text PDF Figures

Aquaculture Journals Page: 76 of 331

Aquaculture Journals – Table of Contents

Comparative Analysis of Mycobacterial Truncated Hemoglobin Promoters and the groEL2 Promoter in Free-Living and Intracellular Mycobacteria Sunil V. Joseph, G. K. Madhavilatha, R. Ajay Kumar, and Sathish Mundayoor Abstract Full Text PDF Figures

Environmental Microbiology

Association of Fecal Indicator Bacteria with Human Viruses and Microbial Source Tracking Markers at Coastal Beaches Impacted by Nonpoint Source Pollution Shannon McQuaig, John Griffith, and Valerie J. Harwood Abstract Full Text PDF Figures Supplemental material

Comparative Inactivation of Murine Norovirus, Human Adenovirus, and Human JC Polyomavirus by Chlorine in Seawater Adriana de Abreu Corrêa, Anna Carratala, Celia Regina Monte Barardi, Miquel Calvo, Rosina Girones, and Sílvia Bofill-Mas Abstract Full Text PDF Figures

Impact of Short-Term Acidification on Nitrification and Nitrifying Bacterial Community Dynamics in Soilless Cultivation Media Eddie Cytryn, Irit Levkovitch, Yael Negreanu, Scot Dowd, Sammy Frenk, and Avner Silber Abstract Full Text PDF Figures Supplemental material

Temporal Dynamics and Decay of Putatively Allochthonous and Autochthonous Viral Genotypes in Contrasting Freshwater Lakes Ian Hewson, Jorge G. Barbosa, Julia M. Brown, Ryan P. Donelan, James B. Eaglesham, Erin M. Eggleston, and Brenna A. LaBarre Abstract Full Text PDF Figures

Culture- and Quantitative IS900 Real-Time PCR-Based Analysis of the Persistence of Mycobacterium avium subsp. paratuberculosis in a Controlled Dairy Cow Farm Environment M. Moravkova, V. Babak, A. Kralova, I. Pavlik, and I. Slana Abstract Full Text PDF

Enumerating Viruses by Using Fluorescence and the Nature of the Nonviral Background Fraction Peter C. Pollard Abstract Full Text PDF Figures

Unexpected Specificity of Interspecies Cobamide Transfer from Geobacter spp. to Organohalide-Respiring Dehalococcoides mccartyi Strains Jun Yan, Kirsti M. Ritalahti, Darlene D. Wagner, and Frank E. Löffler Abstract Full Text PDF Figures Supplemental material

Proximity-Dependent Inhibition of Growth of Mannheimia haemolytica by Pasteurella multocida Jegarubee Bavananthasivam, Rohana P. Dassanayake, Abirami Kugadas, Sudarvili Shanthalingam, Douglas R. Call, Donald P. Knowles, and Subramaniam Srikumaran Abstract Full Text PDF Figures

Aquaculture Journals Page: 77 of 331

Aquaculture Journals – Table of Contents

Roles of Host Species, Geographic Separation, and Isolation in the Seroprevalence of Jamestown Canyon and Snowshoe Hare Viruses in Newfoundland Gregory Goff, Hugh Whitney, and Michael A. Drebot Abstract Full Text PDF Figures

Enzymology and Protein Engineering

Substrate and Inhibitor Spectra of Ethylbenzene Dehydrogenase: Perspectives on Application Potential and Catalytic Mechanism Daniel Knack, Corina Hagel, Maciej Szaleniec, Agnieszka Dudzik, Aleksander Salwinski, and Johann Heider Abstract Full Text PDF Figures Supplemental material

Structure-Guided Expansion of the Substrate Range of Methylmalonyl Coenzyme A Synthetase (MatB) of Rhodopseudomonas palustris Heidi A. Crosby, Katherine C. Rank, Ivan Rayment, and Jorge C. Escalante-Semerena Abstract Full Text PDF Figures

Enhancing the Promiscuous Phosphotriesterase Activity of a Thermostable Lactonase (GkaP) for the Efficient Degradation of Organophosphate Pesticides Yu Zhang, Jiao An, Wei Ye, Guangyu Yang, Zhi-Gang Qian, Hai-Feng Chen, Li Cui, and Yan Feng Abstract Full Text PDF Figures Supplemental material

Evolutionary and Genomic Microbiology

Draft Genome Sequence of a Psychrotolerant Sulfur-Oxidizing Bacterium, Sulfuricella denitrificans skB26, and Proteomic Insights into Cold Adaptation Tomohiro Watanabe, Hisaya Kojima, and Manabu Fukui Abstract Full Text PDF Figures Supplemental material

Food Microbiology

Evaluation of Near-Infrared Pasteurization in Controlling Escherichia coli O157:H7, Salmonella enterica Serovar Typhimurium, and Listeria monocytogenes in Ready-To-Eat Sliced Ham Jae-Won Ha, Sang-Ryeol Ryu, and Dong-Hyun Kang Abstract Full Text PDF Figures

Significance of the Bacteriophage Treatment Schedule in Reducing Salmonella Colonization of Poultry Carlota Bardina, Denis A. Spricigo, Pilar Cortés, and Montserrat Llagostera Abstract Full Text PDF Figures Supplemental material

Characterization of Staphylococcus aureus Strains Associated with Food Poisoning in Shenzhen, China Xiaomei Yan, Bing Wang, Xiaoxia Tao, Qinghua Hu, Zhigang Cui, Jianzhong Zhang, Yiman Lin, Yuanhai You, Xiaolu Shi, and Hajo Grundmann Abstract Full Text PDF Figures

Rerouting Citrate Metabolism in Lactococcus lactis to Citrate-Driven Transamination Agata M. Pudlik and Juke S. Lolkema Aquaculture Journals Page: 78 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures

Association of Nucleotide Polymorphisms within the O-Antigen Gene Cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with Serogroups and Genetic Subtypes Keri N. Norman, Nancy A. Strockbine, and James L. Bono Abstract Full Text PDF Figures Supplemental material

Characterization of Osmotically Induced Filaments of Salmonella enterica Zachary L. Pratt, Bingming Chen, Charles J. Czuprynski, Amy C. L. Wong, and Charles W. Kaspar Abstract Full Text PDF Figures Supplemental material

Characterization of a Leuconostoc Bacteriophage Infecting Flavor Producers of Cheese Starter Cultures Hans Petter Kleppen, Ingolf F. Nes, and Helge Holo Abstract Full Text PDF Figures Supplemental material

Intestinal Origin of Sourdough Lactobacillus reuteri Isolates as Revealed by Phylogenetic, Genetic, and Physiological Analysis Marcia Shu-Wei Su, Phaik Lyn Oh, Jens Walter, and Michael G. Gänzle Abstract Full Text PDF Figures Supplemental material

Genetics and Molecular Biology

Virulence and Metabolic Characteristics of Salmonella enterica Serovar Enteritidis Strains with Different sefD Variants in Hens Cesar A. Morales, Jean Guard, Roxana Sanchez-Ingunza, Devendra H. Shah, and Mark Harrison Abstract Full Text PDF Figures

A Convenient and Robust In Vivo Reporter System To Monitor Gene Expression in the Human Pathogen Helicobacter pylori Andrea Vannini, Francesca Agriesti, Flaviana Mosca, Davide Roncarati, Vincenzo Scarlato, and Alberto Danielli Abstract Full Text PDF Figures

NasT-Mediated Antitermination Plays an Essential Role in the Regulation of the Assimilatory Nitrate Reductase Operon in Azotobacter vinelandii Baomin Wang, Leland S. Pierson III, Christopher Rensing, Malkanthi K. Gunatilaka, and Christina Kennedy Abstract Full Text PDF Figures Supplemental material

Characterization of a Novel Microcin That Kills Enterohemorrhagic Escherichia coli O157:H7 and O26 Lauren J. Eberhart, James R. Deringer, Kelly A. Brayton, Ashish A. Sawant, Thomas E. Besser, and Douglas R. Call Abstract Full Text PDF Figures

Geomicrobiology

Regional Variation in Lytic and Lysogenic Viral Infection in the Southern Ocean and Its Contribution to Biogeochemical Cycling

Aquaculture Journals Page: 79 of 331

Aquaculture Journals – Table of Contents

Claire Evans and Corina P. D. Brussaard Abstract Full Text PDF Figures Supplemental material

Invertebrate Microbiology

Weak Transcription of the cry1Ac Gene in Nonsporulating Bacillus thuringiensis Cells Hui Yang, Pinshu Wang, Qi Peng, Rong Rong, Chunxia Liu, Didier Lereclus, Jie Zhang, Fuping Song, and Dafang Huang Abstract Full Text PDF Figures

Lack of Cry1Fa Binding to the Midgut Brush Border Membrane in a Resistant Colony of Plutella xylostella Moths with a Mutation in the ABCC2 Locus Patricia Hernández-Martínez, Carmen Sara Hernández-Rodríguez, Vidisha Krishnan, Neil Crickmore, Baltasar Escriche, and Juan Ferré Abstract Full Text PDF Figures

The Small Interfering RNA Pathway Is Not Essential for Wolbachia-Mediated Antiviral Protection in Drosophila melanogaster Lauren M. Hedges, Ryuichi Yamada, Scott L. O'Neill, and Karyn N. Johnson Abstract Full Text PDF Figures

Methods

Fast and Sensitive Detection of Bacillus anthracis Spores by Immunoassay Nathalie Morel, Hervé Volland, Julie Dano, Patricia Lamourette, Patricia Sylvestre, Michèle Mock, and Christophe Créminon Abstract Full Text PDF Figures

Comparative Assessment of Nitrogen Fixation Methodologies, Conducted in the Oligotrophic North Pacific Ocean Samuel T. Wilson, Daniela Böttjer, Matthew J. Church, and David M. Karl Abstract Full Text PDF Figures

Microbial Ecology

Genetic Diversity among Bacillus anthracis Soil Isolates at Fine Geographic Scales Chad W. Stratilo and Douglas E. Bader Abstract Full Text PDF Figures

Bacterial Associates of Two Caribbean Coral Species Reveal Species-Specific Distribution and Geographic Variability Kathleen M. Morrow, Anthony G. Moss, Nanette E. Chadwick, and Mark R. Liles Abstract Full Text PDF Figures Supplemental material

Discerning the Role of Bacteroides fragilis in Celiac Disease Pathogenesis E. Sánchez, J. M. Laparra, and Y. Sanz Abstract Full Text PDF Figures

Predicted Protein Subcellular Localization in Dominant Surface Ocean Haiwei Luo

Aquaculture Journals Page: 80 of 331

Aquaculture Journals – Table of Contents

Abstract Full Text PDF Figures Supplemental material

Mercury Resistance and Mercuric Reductase Activities and Expression among Chemotrophic Thermophilic Aquificae Zachary Freedman, Chengsheng Zhu, and Tamar Barkay Abstract Full Text PDF Figures Supplemental material

Changes in Bowel Microbiota Induced by Feeding Weanlings Resistant Starch Stimulate Transcriptomic and Physiological Responses Wayne Young, Nicole C. Roy, Julian Lee, Blair Lawley, Don Otter, Gemma Henderson, Mark J. McCann, and Gerald W. Tannock Abstract Full Text PDF Figures

Genetic and Symbiotic Diversity of Nitrogen-Fixing Bacteria Isolated from Agricultural Soils in the Western Amazon by Using Cowpea as the Trap Plant Amanda Azarias Guimarães, Paula Marcela Duque Jaramillo, Rafaela Simão Abrahão Nóbrega, Ligiane Aparecida Florentino, Karina Barroso Silva, and Fatima Maria de Souza Moreira Abstract Full Text PDF Figures

Identification of Soil Bacteria Susceptible to TiO2 and ZnO Nanoparticles Yuan Ge, Joshua P. Schimel, and Patricia A. Holden Abstract Full Text PDF Figures Supplemental material

Phosphate Starvation Promotes Swarming Motility and Cytotoxicity of Pseudomonas aeruginosa Manjeet Bains, Lucía Fernández, and Robert E. W. Hancock Abstract Full Text PDF Figures Supplemental material

Mycology

Genetic Diversity and Mating Type Distribution of Tuber melanosporum and Their Significance to Truffle Cultivation in Artificially Planted Truffiéres in Australia C. C. Linde and H. Selmes Abstract Full Text PDF

Physiology

Protection of Bacillus pumilus Spores by Aleksandra Checinska, Malcolm Burbank, and Andrzej J. Paszczynski Abstract Full Text PDF Figures

Contribution of Surfactin and SwrA to Flagellin Expression, Swimming, and Surface Motility in Bacillus subtilis Emilia Ghelardi, Sara Salvetti, Mara Ceragioli, Sokhna A. Gueye, Francesco Celandroni, and Sonia Senesi Abstract Full Text PDF Figures

Proteomic Analysis of Survival of Rhodococcus jostii RHA1 during Carbon Starvation Marianna A. Patrauchan, Daisuke Miyazawa, Justin C. LeBlanc, Carol Aiga, Christine Florizone, Manisha Dosanjh, Julian Davies, Lindsay D. Eltis, and William W. Mohn Abstract Full Text PDF Figures Supplemental material Aquaculture Journals Page: 81 of 331

Aquaculture Journals – Table of Contents

Plant Microbiology

Overexpression of ShCYP51B and ShatrD in Sclerotinia homoeocarpa Isolates Exhibiting Practical Field Resistance to a Demethylation Inhibitor Fungicide Jon Hulvey, James T. Popko Jr., Hyunkyu Sang, Andrew Berg, and Geunhwa Jung Abstract Full Text PDF Figures Supplemental material

Public Health Microbiology

Toxigenic Clostridium difficile PCR Ribotypes from Wastewater Treatment Plants in Southern Switzerland Vincenza Romano, Vincenzo Pasquale, Karel Krovacek, Federica Mauri, Antonella Demarta, and Stefano Dumontet Abstract Full Text PDF

Previous – Top – Next

Aquaculture Journals Page: 82 of 331

Aquaculture Journals – Table of Contents

AAAppppppllliiieeeddd MMMiiicccrrrooobbbiiiooolllooogggyyy aaannnddd BBBiiiooottteeeccchhhnnnooolllooogggyyy

VOLUME 94, PART 6, JUNE 2012 Website

Research Articles

Mini-Review

Field applicability of Compound-Specific Isotope Analysis (CSIA) for characterization and quantification of in situ contaminant degradation in aquifers M. Braeckevelt, A. Fischer and M. Kästner Download PDF (600.8 KB) View HTML

Microbial steroid transformations: current state and prospects Marina V. Donova and Olga V. Egorova Download PDF (519.1 KB) View HTML

Development of Monascus fermentation technology for high hypolipidemic effect Chun-Lin Lee and Tzu-Ming Pan Download PDF (411.7 KB) View HTML

Recent advances on applications and biotechnological production of D-psicose Wanmeng Mu, Wenli Zhang, Yinghui Feng, Bo Jiang and Leon Zhou Download PDF (165.0 KB) View HTML

Real-time monitoring and control of microbial bioprocesses with focus on the specific growth rate: current state and perspectives Moira Monika Schuler and Ian William Marison Download PDF (456.7 KB) View HTML

Current knowledge of the Escherichia coli phosphoenolpyruvate–carbohydrate phosphotransferase system: peculiarities of regulation and impact on growth and product formation Adelfo Escalante, Ania Salinas Cervantes, Guillermo Gosset and Francisco Bolívar Download PDF (427.8 KB) View HTML

Biotechnological products and process engineering

Patterns of carbohydrate and changes under nitrogen starvation in the Haematococcus pluvialis and sp. Lee Recht, Aliza Zarka and Sammy Boussiba Download PDF (279.5 KB) View HTML

Biotechnological products and process engineering

In vitro and in vivo comparisons of the effects of the fruiting body and mycelium of Antrodia camphorata against amyloid β-protein-induced neurotoxicity and memory impairment Li-Chun Wang, Shen-En Wang, Jyh-Jye Wang, Tsung-Yu Tsai and Chun-Hong Lin, et al. Download PDF (712.7 KB) View HTML

Aquaculture Journals Page: 83 of 331

Aquaculture Journals – Table of Contents

Pathway redesign for deoxyviolacein biosynthesis in Citrobacter freundii and characterization of this pigment Pei-xia Jiang, Hai-sheng Wang, Su Xiao, Ming-yue Fang and Rui-ping Zhang, et al. Download PDF (772.8 KB) View HTML Supplemental

Impact of aeration and agitation on metabolic heat and protease secretion of Aspergillus tamarii in a real-time biological reaction calorimeter Balaji Dhandapani, Surianarayanan Mahadevan, Sathish Sundar Dhilipkumar, Suseela Rajkumar and Asit Baran Mandal Download PDF (564.7 KB) View HTML

Biotechnologically relevant enzymes and proteins

Cloning and expression in Pichia pastoris of an Irpex lacteus rhamnogalacturonan hydrolase tolerant to acetylated rhamnogalacturonan J. Normand, E. Bonnin and P. Delavault Download PDF (391.8 KB) View HTML

An isofenphos-methyl hydrolase (Imh) capable of hydrolyzing the P–O–Z moiety of organophosphorus pesticides containing an aryl or heterocyclic group Rong Li, Yuan Liu, Jian Zhang, Kai Chen and Shunpeng Li, et al. Download PDF (1.4 MB) View HTML

Expression and characterization of human proinsulin fused to thioredoxin in Escherichia coli Aldana Trabucchi, Luciano Lucas Guerra, Natalia Inés Faccinetti, Ruben Francisco Iacono and Edgardo Poskus, et al. Download PDF (401.8 KB) View HTML

Preferential and rapid degradation of raw rice starch by an α-amylase of glycoside hydrolase subfamily GH13_37 Yin Lei, Hui Peng, Ying Wang, Yuantao Liu and Fang Han, et al. Download PDF (292.5 KB) View HTML

Applied genetics and molecular biotechnology

Improvements in ethanol production from xylose by mating recombinant xylose-fermenting Saccharomyces cerevisiae strains Hiroko Kato, Hiroaki Suyama, Ryosuke Yamada, Tomohisa Hasunuma and Akihiko Kondo Download PDF (397.4 KB) View HTML Supplemental

Transcription analysis of hyaluronan biosynthesis genes in Streptococcus zooepidemicus and metabolically engineered Lactococcus lactis Shashi Bala Prasad, K. B. Ramachandran and Guhan Jayaraman Download PDF (785.0 KB) View HTML Supplemental

Genomics, transcriptomics, proteomics

Characterization of lytic Pseudomonas aeruginosa bacteriophages via biological properties and genomic sequences Natia Karumidze, Julie. A. Thomas, Nino Kvatadze, Marina Goderdzishvili and Kevin W. Hakala, et al. Download PDF (357.6 KB) View HTML

Applied microbial and cell physiology

Aquaculture Journals Page: 84 of 331

Aquaculture Journals – Table of Contents

The two-step biotransformation of monosodium glutamate to GABA by Lactobacillus brevis growing and resting cells Ying Zhang, Lei Song, Qiang Gao, Shao Mei Yu and Lei Li, et al. Download PDF (327.1 KB) View HTML

Open Access Comparison and characterization of α-amylase inducers in Aspergillus nidulans based on nuclear localization of AmyR Yuriko Murakoshi, Tomohiro Makita, Masashi Kato and Tetsuo Kobayashi Download PDF (343.5 KB) View HTML

Methods and protocols

Fast and accurate preparation fatty acid methyl esters by microwave-assisted derivatization in the yeast Saccharomyces cerevisiae Sakda Khoomrung, Pramote Chumnanpuen, Suwanee Jansa-ard, Intawat Nookaew and Jens Nielsen Download PDF (541.0 KB) View HTML Supplemental

Environmental biotechnology

Biodegradation of melamine and its hydroxy derivatives by a bacterial consortium containing a novel Nocardioides species Kazuhiro Takagi, Kunihiko Fujii, Ken-ichi Yamazaki, Naoki Harada and Akio Iwasaki Download PDF (313.9 KB) View HTML

Open Access Unravelling the reasons for disproportion in the ratio of AOB and NOB in aerobic granular sludge Mari K. H. Winkler, João P. Bassin, Robbert Kleerebezem, Dimitry Y. Sorokin and Mark C. M. van Loosdrecht Download PDF (423.7 KB) View HTML

Bioenergy and biofuels

Ethanol production from wood hydrolysate using genetically engineered Zymomonas mobilis Hideshi Yanase, Hitoshi Miyawaki, Mitsugu Sakurai, Akinori Kawakami and Mari Matsumoto, et al. Download PDF (521.9 KB) View HTML

Previous – Top – Next

VOLUME 95, PART 1, JULY 2012 Website

Research Articles

Mini-Review

Synthesis and production of unsaturated and polyunsaturated fatty acids in yeast: current state and perspectives Hiroshi Uemura Download PDF (295.4 KB) View HTML

Aquaculture Journals Page: 85 of 331

Aquaculture Journals – Table of Contents

Effect of impurities in biodiesel-derived waste glycerol on the performance and feasibility of biotechnological processes Afroditi Chatzifragkou and Seraphim Papanikolaou Download PDF (355.4 KB) View HTML

Impact of plant derivatives on the growth of foodborne pathogens and the functionality of probiotics Rabin Gyawali and Salam A. Ibrahim Download PDF (388.4 KB) View HTML

Endophytic fungi: novel sources of anticancer lead molecules Sheela Chandra Download PDF (318.4 KB) View HTML

Transcriptomic studies of phosphate control of primary and secondary metabolism in Streptomyces coelicolor Juan F. Martín, Fernando Santos-Beneit, Antonio Rodríguez-García, Alberto Sola-Landa and Margaret C. M. Smith, et al. Download PDF (530.7 KB) View HTML

Degradation and assimilation of aromatic compounds by Corynebacterium glutamicum: another potential for applications for this bacterium? Xi-Hui Shen, Ning-Yi Zhou and Shuang-Jiang Liu Download PDF (439.7 KB) View HTML Supplemental

Biotechnological products and process engineering

Efficient production of (R)-o-chloromandelic acid by deracemization of o- chloromandelonitrile with a new nitrilase mined from Labrenzia aggregata Chen-Sheng Zhang, Zhi-Jun Zhang, Chun-Xiu Li, Hui-Lei Yu and Gao-Wei Zheng, et al. Download PDF (319.4 KB) View HTML

Production and characterisation of recombinant α-L-arabinofuranosidase for production of xylan hydrogels A. F. A. Chimphango, S. H. Rose, W. H. van Zyl and J. F. Görgens Download PDF (1.2 MB) View HTML

The echinocandin B producer fungus Aspergillus nidulans var. roseus ATCC 58397 does not possess innate resistance against its lipopeptide antimycotic Viktória Tóth, Csilla Terézia Nagy, István Pócsi and Tamás Emri Download PDF (257.6 KB) View HTML Supplemental

Biotechnologically relevant enzymes and proteins

CYP264B1 from Sorangium cellulosum So ce56: a fascinating norisoprenoid and sesquiterpene hydroxylase Thuy T. B. Ly, Yogan Khatri, Josef Zapp, Michael C. Hutter and Rita Bernhardt Download PDF (494.5 KB) View HTML Supplemental

Metagenomic cellulases highly tolerant towards the presence of ionic liquids— linking thermostability and halotolerance Nele Ilmberger, Diana Meske, Julia Juergensen, Michael Schulte and Peter Barthen, et al. Download PDF (507.8 KB) View HTML Supplemental

Aquaculture Journals Page: 86 of 331

Aquaculture Journals – Table of Contents

Novel magnetic microspheres of P (GMA-b-HEMA): preparation, lipase immobilization and enzymatic activity in two phases Yanjun Cui, Xia Chen, Yanfeng Li, Xiao Liu and Lin Lei, et al. Download PDF (464.6 KB) View HTML

Applied genetics and molecular biotechnology

Structural analysis and biosynthetic engineering of a solubility-improved and less-hemolytic nystatin-like polyene in Pseudonocardia autotrophica Mi-Jin Lee, Dekun Kong, Kyuboem Han, David H. Sherman and Linquan Bai, et al. Download PDF (547.7 KB) View HTML Supplemental

Improving putrescine production by Corynebacterium glutamicum by fine-tuning ornithine transcarbamoylase activity using a plasmid addiction system Jens Schneider, Dorit Eberhardt and Volker F. Wendisch Download PDF (313.6 KB) View HTML

Engineered high content of ricinoleic acid in fission yeast Schizosaccharomyces pombe Roman Holic, Hisashi Yazawa, Hiromichi Kumagai and Hiroshi Uemura Download PDF (506.6 KB) View HTML

Genomics, transcriptomics, proteomics

Transcriptome profiling of Zymomonas mobilis under furfural stress Ming-xiong He, Bo Wu, Zong-xia Shui, Qi-chun Hu and Wen-guo Wang, et al. Download PDF (481.5 KB) View HTML Supplemental

Phosphoproteomic investigation of a solvent producing bacterium Clostridium acetobutylicum Xue Bai and Zhihong Ji Download PDF (344.3 KB) View HTML Supplemental

Applied microbial and cell physiology

Controlled synthesis of Mn2O3 nanowires by hydrothermal method and their bactericidal and cytotoxic impact: a promising future material M. Shamshi Hassan, Touseef Amna, Dipendra Raj Pandeya, A. M. Hamza and Yang You Bing, et al. Download PDF (570.1 KB) View HTML

Modeling of permeabilization process in Pseudomonas putida G7 for enhanced limonin bioconversion Meenakshi Malik, Abhijit Ganguli and Moushumi Ghosh Download PDF (486.9 KB) View HTML

Methods and Protocols

Application of purified recombinant antigenic spike fragments to the diagnosis of avian infectious bronchitis virus infection Kuan-Hsun Lin, Chuen-Fu Lin, Shyan-Song Chiou, Ai-Ping Hsu and Min-Shiuh Lee, et al. Download PDF (486.4 KB) View HTML

Effect of ZnO and TiO2 nanoparticles preilluminated with UVA and UVB light on Escherichia coli and Bacillus subtilis

Aquaculture Journals Page: 87 of 331

Aquaculture Journals – Table of Contents

Shin Woong Kim and Youn-Joo An Download PDF (606.2 KB) View HTML

Environmental biotechnology

Isolation and characterization of a Klebsiella oxytoca strain for simultaneous azo- dye anaerobic reduction and bio-hydrogen production Lei Yu, Wen-Wei Li, Michael Hon-Wah Lam, Han-Qing Yu and Chao Wu Download PDF (530.5 KB) View HTML

2,4-DNT removal in intimately coupled photobiocatalysis: the roles of adsorption, photolysis, photocatalysis, and biotransformation Donghui Wen, Guozheng Li, Rui Xing, Seongjun Park and Bruce E. Rittmann Download PDF (517.9 KB) View HTML Supplemental

Erratum

Erratum to: Development and characterization of DehaloR^2, a novel anaerobic microbial consortium performing rapid dechlorination of TCE to ethene Michal Ziv-El, Anca G. Delgado, Ying Yao, Dae-Wook Kang and Katherine G. Nelson, et al. Download PDF (77.8 KB) View HTML

Previous – Top – Next

VOLUME 95, PART 2, JULY 2012 Website

Research Articles

Mini-Review

Metallic oxide nanoparticles: state of the art in biogenic syntheses and their mechanisms Nelson Durán and Amedea B. Seabra Download PDF (823.0 KB) View HTML

Capability of yeast derivatives to adhere enteropathogenic bacteria and to modulate cells of the innate immune system Anja Ganner and Gerd Schatzmayr Download PDF (269.5 KB) View HTML

Efficient surface modification of biomaterial to prevent biofilm formation and the attachment of microorganisms Kateryna Bazaka, Mohan V. Jacob, Russell J. Crawford and Elena P. Ivanova Download PDF (580.2 KB) View HTML

Functions, applications and production of 2-O-D-glucopyranosyl-L-ascorbic acid Ruizhi Han, Long Liu, Jianghua Li, Guocheng Du and Jian Chen Download PDF (354.1 KB) View HTML

Production of biogas from solid organic wastes through anaerobic digestion: a review Ismail Muhammad Nasir, Tinia I. Mohd Ghazi and Rozita Omar Download PDF (170.1 KB) View HTML

Aquaculture Journals Page: 88 of 331

Aquaculture Journals – Table of Contents

Impact of Azotobacter exopolysaccharides on sustainable agriculture Samiran S. Gauri, Santi M. Mandal and Bikas R. Pati Download PDF (733.1 KB) View HTML

Aspergillus and Penicillium identification using DNA sequences: barcode or MLST? Stephen W. Peterson Download PDF (173.8 KB) View HTML

Biotechnological products and process engineering

Flow cytometric assessment of the protectants for enhanced in vitro survival of probiotic lactic acid bacteria through simulated human gastro-intestinal stresses Song Chen, Yu Cao, Lynnette R. Ferguson, Quan Shu and Sanjay Garg Download PDF (610.6 KB) View HTML

Development of a whole-cell biocatalyst co-expressing P450 monooxygenase and glucose dehydrogenase for synthesis of epoxyhexane Akasit Siriphongphaew, Pimpaya Pisnupong, Jirarut Wongkongkatep, Pranee Inprakhon and Alisa S. Vangnai, et al. Download PDF (439.6 KB) View HTML

Alternaria sp. MG1, a resveratrol-producing fungus: isolation, identification, and optimal cultivation conditions for resveratrol production Junling Shi, Qin Zeng, Yanlin Liu and Zhongli Pan Download PDF (386.6 KB) View HTML Supplemental

Selective biosorption and recovery of Ruthenium from industrial effluents with Rhodopseudomonas palustris strains Giovanni Colica, Stefania Caparrotta and Roberto De Philippis Download PDF (356.5 KB) View HTML

Biotechnologically relevant enzymes and proteins

Open Access Hot or not? Discovery and characterization of a thermostable alditol oxidase from Acidothermus cellulolyticus 11B Remko T. Winter, Dominic P. H. M. Heuts, Egon M. A. Rijpkema, Edwin van Bloois and Hein J. Wijma, et al. Download PDF (434.2 KB) View HTML Supplemental

Directed evolution of a highly active Yersinia mollaretii phytase Amol V. Shivange, Annegret Serwe, Alexander Dennig, Danilo Roccatano and Stefan Haefner, et al. Download PDF (547.8 KB) View HTML Supplemental

Biochemical and genetic analysis of a cutinase-type polyesterase from a thermophilic Thermobifida alba AHK119 Uschara Thumarat, Ryota Nakamura, Takeshi Kawabata, Hideyuki Suzuki and Fusako Kawai Download PDF (691.8 KB) View HTML Supplemental

Applied genetics and molecular biotechnology

Aquaculture Journals Page: 89 of 331

Aquaculture Journals – Table of Contents

L-Pantoyl lactone dehydrogenase from Rhodococcus erythropolis: genetic analyses and application to the stereospecific oxidation of L-pantoyl lactone Dayong Si, Nobuyuki Urano, Shinya Nozaki, Kohsuke Honda and Sakayu Shimizu, et al. Download PDF (2.6 MB) View HTML

Promotion of glycerol utilization using ethanol and 1-propanol in Schizosaccharomyces pombe Tomohiko Matsuzawa, Futoshi Hara, Hideki Tohda, Hiroshi Uemura and Kaoru Takegawa Download PDF (402.3 KB) View HTML

Molecular cloning of the gene cluster for lariatin biosynthesis of Rhodococcus jostii K01-B0171 Junji Inokoshi, Maki Matsuhama, Midori Miyake, Haruo Ikeda and Hiroshi Tomoda Download PDF (340.3 KB) View HTML Supplemental

Applied microbial and cell physiology

Deletion of lactate dehydrogenase in Enterobacter aerogenes to enhance 2,3- butanediol production Moo-Young Jung, Chiam Yu Ng, Hyohak Song, Jinwon Lee and Min-Kyu Oh Download PDF (371.8 KB) View HTML

Elevated poly(3-hydroxybutyrate) synthesis in mutants of Ralstonia eutropha H16 defective in lipopolysaccharide biosynthesis Ulrike Brandt, Matthias Raberg, Birgit Voigt, Michael Hecker and Alexander Steinbüchel Download PDF (658.4 KB) View HTML Supplemental

Methods and protocols

An advanced PCR method for the specific detection of viable total coliform bacteria in pasteurized milk Takashi Soejima, Jun-ichi Minami, Tomoko Yaeshima and Keiji Iwatsuki Download PDF (634.0 KB) View HTML

A targeted gene knockout method using a newly constructed temperature- sensitive plasmid mediated homologous recombination in Bifidobacterium longum Kouta Sakaguchi, Jianlong He, Saori Tani, Yasunobu Kano and Tohru Suzuki Download PDF (412.3 KB) View HTML

Environmental biotechnology

Isolation and characterization of a Rhodococcus strain able to degrade 2- fluorophenol Anouk F. Duque, Syed A. Hasan, Vânia S. Bessa, Maria F. Carvalho and Ghufrana Samin, et al. Download PDF (278.0 KB) View HTML

Decolorization of textile dyes by Alishewanella sp. KMK6 Yogesh M. Kolekar and Kisan M. Kodam Download PDF (353.2 KB) View HTML Supplemental

Bioenergy and biofuels

Aquaculture Journals Page: 90 of 331

Aquaculture Journals – Table of Contents

Insertion of transposon in the vicinity of SSK2 confers enhanced tolerance to furfural in Saccharomyces cerevisiae Hyun-Soo Kim, Na-Rae Kim, Wankee Kim and Wonja Choi Download PDF (349.8 KB) View HTML

Bioconversion of dilute-acid pretreated sorghum bagasse to ethanol by Neurospora crassa Ioannis Dogaris, Olga Gkounta, Diomi Mamma and Dimitris Kekos Download PDF (416.1 KB) View HTML

Previous – Top – Next

VOLUME 95, PART 3, AUGUST 2012 Website

Research Articles

Mini-Review

Microbial communities in large-scale wood piles and their effects on wood quality and the environment Matthias Noll and Raida Jirjis Download PDF (299.0 KB) View HTML

Open Access Pectin-rich biomass as feedstock for fuel ethanol production Meredith C. Edwards and Joy Doran-Peterson Download PDF (332.1 KB) View HTML

Recent developments in yeast cell surface display toward extended applications in biotechnology Tsutomu Tanaka, Ryosuke Yamada, Chiaki Ogino and Akihiko Kondo Download PDF (377.4 KB) View HTML

Structure, biosynthesis, and properties of kurstakins, nonribosomal lipopeptides from Bacillus spp. Max Béchet, Thibault Caradec, Walaa Hussein, Ahmed Abderrahmani and Marlène Chollet, et al. Download PDF (289.3 KB) View HTML

Surviving in the presence of sulphur dioxide: strategies developed by wine yeasts Benoit Divol, Maret du Toit and Edward Duckitt Download PDF (489.3 KB) View HTML

Biotechnological products and process engineering

Synthesis of highly water-soluble feruloyl diglycerols by esterification of an Aspergillus niger feruloyl esterase Masaki Kikugawa, Moriyasu Tsuchiyama, Kenji Kai and Tatsuji Sakamoto Download PDF (339.0 KB) View HTML

Development of a bioprocess to convert PET derived terephthalic acid and biodiesel derived glycerol to medium chain length polyhydroxyalkanoate

Aquaculture Journals Page: 91 of 331

Aquaculture Journals – Table of Contents

Shane T. Kenny, Jasmina Nikodinovic Runic, Walter Kaminsky, Trevor Woods and Ramesh P. Babu, et al. Download PDF (443.5 KB) View HTML

Asymmetric bioreduction of activated alkenes by a novel isolate of Achromobacter species producing enoate reductase Yan-Jie Liu, Xiao-Qiong Pei, Hui Lin, Ping Gai and Yu-Chang Liu, et al. Download PDF (752.7 KB) View HTML Supplemental

Biotechnologically relevant enzymes and proteins

Expression of a library of fungal β-glucosidases in Saccharomyces cerevisiae for the development of a biomass fermenting strain Caroline Wilde, Nicholas D. Gold, Nancy Bawa, José Humberto M. Tambor and Lina Mougharbel, et al. Download PDF (503.0 KB) View HTML Supplemental

Enhanced activity of Thermotoga maritima cellulase 12A by mutating a unique surface loop Ya-Shan Cheng, Tzu-Ping Ko, Jian-Wen Huang, Tzu-Hui Wu and Cheng-Yen Lin, et al. Download PDF (358.6 KB) View HTML Supplemental

Improvement of N-glycan site occupancy of therapeutic glycoproteins produced in Pichia pastoris Byung-Kwon Choi, Shannon Warburton, Heping Lin, Rohan Patel and Istvan Boldogh, et al. Download PDF (488.7 KB) View HTML Supplemental

Applied genetics and molecular biotechnology

Open Access Overproduction and easy recovery of target gene products from , photosynthesizing microorganisms Munehiko Asayama Download PDF (491.5 KB) View HTML Supplemental

Detection of an internal translation activity in the 5′ region of Bombyx mori infectious flacherie virus Mingqian Li, Nana Man, Haihong Qiu, Shunfeng Cai and Xinyi He, et al. Download PDF (540.4 KB) View HTML

Expression analysis of the spi gene in the pock-forming plasmid pSA1.1 from Streptomyces azureus and localization of its product during differentiation Katusmi Doi, Yukiko Ohyama, Eiji Yokoyama, Takashi Nishiyama and Yasuhiro Fujino, et al. Download PDF (473.4 KB) View HTML

Genomics, transcriptomics, proteomics

Differential proteomic analysis of the response of Stenotrophomonas maltophilia to imipenem Laurence Van Oudenhove, Kris De Vriendt, Jozef Van Beeumen, Paola Sandra Mercuri and Bart Devreese Download PDF (380.6 KB) View HTML Supplemental

Applied microbial and cell physiology

Aquaculture Journals Page: 92 of 331

Aquaculture Journals – Table of Contents

Impact of each individual component of the mutated PTSNag on glucose uptake and phosphorylation in Ralstonia eutropha G+1 Matthias Raberg, Chlud Kaddor, Bernhard Kusian, Gertrud Stahlhut and Radka Budinova, et al. Download PDF (346.1 KB) View HTML Supplemental

Effect of water activity and protective solutes on growth and subsequent survival to air-drying of Lactobacillus and Bifidobacterium cultures Claude P. Champagne, Yves Raymond and Jean-Paul Simon Download PDF (559.9 KB) View HTML

The EmhABC efflux pump decreases the efficiency of phenanthrene biodegradation by Pseudomonas fluorescens strain LP6a Abigail A. Adebusuyi, Angela Y. Smith, Murray R. Gray and Julia M. Foght Download PDF (246.5 KB) View HTML

Methods and protocols

Step-by-step strategy for protein enrichment and proteome characterisation of extracellular polymeric substances in wastewater treatment systems Ana F. Silva, Gilda Carvalho, Renata Soares, Ana V. Coelho and M. Teresa Barreto Crespo Download PDF (352.0 KB) View HTML

A method for evaluating the host range of bacteriophages using phages fluorescently labeled with 5-ethynyl-2′-deoxyuridine (EdU) Sayaka Ohno, Hironori Okano, Yasunori Tanji, Akiyoshi Ohashi and Kazuya Watanabe, et al. Download PDF (614.3 KB) View HTML Supplemental

Environmental biotechnology

Biodegradation of polycyclic aromatic hydrocarbons by a halophilic microbial consortium Seyed Mohammad Mehdi Dastgheib, Mohammad Ali Amoozegar, Khosro Khajeh, Mahmoud Shavandi and Antonio Ventosa Download PDF (414.9 KB) View HTML

Influence of the sulfur species reactivity on biofilm conformation during pyrite colonization by Acidithiobacillus thiooxidans René H. Lara, J. Viridiana García-Meza, Roel Cruz, Donato Valdez-Pérez and Ignacio González Download PDF (467.3 KB) View HTML

Impact of an indigenous microbial enhanced oil recovery field trial on microbial community structure in a high pour-point oil reservoir Fan Zhang, Yue-Hui She, Hua-Min Li, Xiao-Tao Zhang and Fu-Chang Shu, et al. Download PDF (537.1 KB) View HTML

Erratum

Erratum to: Improvement of N-glycan site occupancy of therapeutic glycoproteins produced in Pichia pastoris Byung-Kwon Choi, Shannon Warburton, Heping Lin, Rohan Patel and Istvan Boldogh, et al. Download PDF (64.3 KB) View HTML

Previous – Top – Next

Aquaculture Journals Page: 93 of 331

Aquaculture Journals – Table of Contents

VOLUME 95, PART 4, AUGUST 2012 Website

Research Articles

Mini-Review

Fungal cytochrome P450 sterol 14α-demethylase (CYP51) and azole resistance in plant and human pathogens Rayko Becher and Stefan G. R. Wirsel Download PDF (1.4 MB) View HTML

Downstream processing of biotechnological produced succinic acid Ke-Ke Cheng, Xue-Bing Zhao, Jing Zeng, Ru-Chun Wu and Yun-Zhen Xu, et al. Download PDF (209.1 KB) View HTML

Stress-tolerant P-solubilizing microorganisms N. Vassilev, B. Eichler-Löbermann and M. Vassileva Download PDF (201.5 KB) View HTML

Interspecific interactions in mixed microbial cultures in a biodegradation perspective H. Mikesková, Č. Novotný and K. Svobodová Download PDF (277.5 KB) View HTML

Microbial transformation of azaarenes and potential uses in pharmaceutical synthesis Igor A. Parshikov, Alexander I. Netrusov and John B. Sutherland Download PDF (972.3 KB) View HTML

Genetic linkage mapping in fungi: current state, applications, and future trends Marie Foulongne-Oriol Download PDF (295.6 KB) View HTML

Biotechnological products and process engineering

Variation of the by-product spectrum during α-ketoglutaric acid production from raw glycerol by overexpression of fumarase and pyruvate carboxylase genes in Yarrowia lipolytica Christina Otto, Venelina Yovkova, Andreas Aurich, Stephan Mauersberger and Gerold Barth Download PDF (400.2 KB) View HTML

A marine-derived Streptomyces sp. MS449 produces high yield of actinomycin X2 and actinomycin D with potent anti-tuberculosis activity Caixia Chen, Fuhang Song, Qian Wang, Wael M. Abdel-Mageed and Hui Guo, et al. Download PDF (478.1 KB) View HTML Supplemental

Biotechnologically relevant enzymes and proteins

Production of 10-hydroxystearic acid from and olive oil hydrolyzate by an oleate hydratase from Lysinibacillus fusiformis Bi-Na Kim, Young-Chul Joo, Yeong-Su Kim, Kyoung-Rok Kim and Deok-Kun Oh Download PDF (424.7 KB) View HTML

Aquaculture Journals Page: 94 of 331

Aquaculture Journals – Table of Contents

Bactericidal activity of Musca domestica cecropin (Mdc) on multidrug-resistant clinical isolate of Escherichia coli X. Lu, J. Shen, X. Jin, Y. Ma and Y. Huang, et al. Download PDF (267.7 KB) View HTML

A novel thermoacidophilic and thermostable endo-β-1,4-glucanase from Phialophora sp. G5: its thermostability influenced by a distinct β-sheet and the carbohydrate-binding module Junqi Zhao, Pengjun Shi, Huoqing Huang, Zhongyuan Li and Tiezheng Yuan, et al. Download PDF (876.4 KB) View HTML

Applied genetics and molecular biotechnology

Codon-optimized glucoamylase sGAI of Aspergillus awamori improves starch utilization in an industrial yeast Lorenzo Favaro, Tania Jooste, Marina Basaglia, Shaunita H. Rose and Maryna Saayman, et al. Show SummaryHide Summary Download PDF (726.5 KB) View HTML

Enhancement of photoheterotrophic biohydrogen production at elevated temperatures by the expression of a thermophilic clostridial hydrogenase Shou-Chen Lo, Shau-Hua Shih, Jui-Jen Chang, Chun-Ying Wang and Chieh-Chen Huang Show SummaryHide Summary Download PDF (299.2 KB) View HTML

Genomics, transcriptomics, proteomics

Open Access Substrate-specific transcription of the enigmatic GH61 family of the pathogenic white-rot fungus Heterobasidion irregulare during growth on lignocellulose Igor Yakovlev, Gustav Vaaje-Kolstad, Ari M. Hietala, Emil Stefańczyk and Halvor Solheim, et al. Download PDF (1.1 MB) View HTML Supplemental

Applied microbial and cell physiology

Lactobacillus reuteri CRL 1101 highly produces mannitol from sugarcane molasses as carbon source Maria Eugenia Ortiz, María José Fornaguera, Raúl R. Raya and Fernanda Mozzi Download PDF (269.0 KB) View HTML

Physiological characterization of recombinant Saccharomyces cerevisiae expressing the Aspergillus nidulans phosphoketolase pathway: validation of activity through 13C-based metabolic flux analysis Marta Papini, Intawat Nookaew, Verena Siewers and Jens Nielsen Download PDF (336.5 KB) View HTML Supplemental

Volatile sulphur compounds and pathways of L-methionine catabolism in Williopsis yeasts Amelia W. J. Tan, Pin-Rou Lee, Yi-Xin Seow, Peter K. C. Ong and Shao-Quan Liu Download PDF (310.3 KB) View HTML Supplemental

Comparison of the transient responses of Escherichia coli to a glucose pulse of various intensities

Aquaculture Journals Page: 95 of 331

Aquaculture Journals – Table of Contents

Sirichai Sunya, Frank Delvigne, Jean-Louis Uribelarrea, Carole Molina-Jouve and Nathalie Gorret Download PDF (711.4 KB) View HTML Supplemental

Methods and protocols

Development of a short-term assay based on the evaluation of the plasma membrane integrity of the alga Pseudokirchneriella subcapitata Manuela D. Machado and Eduardo V. Soares Download PDF (364.8 KB) View HTML Supplemental

Environmental biotechnology

Assessment of the anti-biofouling potentials of a copper iodide-doped nylon mesh Tetsuya Sato, Yoshie Fujimori, Tsuruo Nakayama, Yasuo Gotoh and Yoshihiko Sunaga, et al. Download PDF (551.7 KB) View HTML

Characterization of a methane-oxidizing biofilm using microarray, and confocal microscopy with image and geostatic analyses Tae Gwan Kim, Taewoo Yi, Eun-Hee Lee, Hee Wook Ryu and Kyung-Suk Cho Download PDF (250.0 KB) View HTML Supplemental

Long-term field fertilization alters the diversity of autotrophic bacteria based on the ribulose-1,5-biphosphate carboxylase/oxygenase (RubisCO) large-subunit genes in paddy soil Hongzhao Yuan, Tida Ge, Xiaohong Wu, Shoulong Liu and Chengli Tong, et al. Download PDF (498.6 KB) View HTML

Chemically inhibited ATP synthesis promoted detachment of different-age biofilms from membrane surface Huijuan Xu, Kaiwen Teo, Huiling Neo and Yu Liu Download PDF (838.4 KB) View HTML

Bioenergy and biofuels

Elucidating and reprogramming Escherichia coli metabolisms for obligate anaerobic n-butanol and isobutanol production Cong T. Trinh Download PDF (492.5 KB) View HTML Supplemental

Erratum

Erratum to: Production of 10-hydroxystearic acid from oleic acid and olive oil hydrolyzate by an oleate hydratase from Lysinibacillus fusiformis Bi-Na Kim, Young-Chul Joo, Yeong-Su Kim, Kyoung-Rok Kim and Deok-Kun Oh Download PDF (79.4 KB) View HTML

Previous – Top – Next

VOLUME 95, PART 5, SEPTEMBER 2012 Website

Research Articles

Aquaculture Journals Page: 96 of 331

Aquaculture Journals – Table of Contents

Mini-Review

Magnetotactic bacteria: promising biosorbents for heavy metals Wei Zhou, Yanzong Zhang, Xiaohui Ding, Yan Liu and Fei Shen, et al. Download PDF (282.8 KB) View HTML

Rapeseed and sunflower meal: a review on biotechnology status and challenges Anne Lomascolo, Eva Uzan-Boukhris, Jean-Claude Sigoillot and Frédéric Fine Download PDF (199.7 KB) View HTML

Multi-catalysis reactions: new prospects and challenges of biotechnology to valorize lignin Christoph A. Gasser, Gregor Hommes, Andreas Schäffer and Philippe F.-X. Corvini Download PDF (4.3 MB) View HTML

Molecular tools for deciphering the microbial community structure and diversity in rumen ecosystem Sunil Kumar Sirohi, Nasib Singh, Sumit Singh Dagar and Anil Kumar Puniya Download PDF (343.2 KB) View HTML

Recent research on 3-phenyllactic acid, a broad-spectrum antimicrobial compound Wanmeng Mu, Shuhuai Yu, Lanjun Zhu, Tao Zhang and Bo Jiang Download PDF (207.7 KB) View HTML

Biotechnological products and process engineering

Biosilica structures obtained from Nitzschia, Ditylum, Skeletonema, and Coscinodiscus diatom by a filtration-aided acid cleaning method Yu Wang, Deyuan Zhang, Jun Cai, Junfeng Pan and Mingli Chen, et al. Download PDF (1.6 MB) View HTML Supplemental

Development of a pilot-scale production process and characterization of a recombinant Japanese encephalitis virus envelope domain III protein expressed in Escherichia coli Nagesh K. Tripathi, Ambuj Shrivastava, Karttik C. Biswal and P. V. Lakshmana Rao Download PDF (396.9 KB)View HTML

Biotechnologically relevant enzymes and proteins

Recombinant expression, purification, and antimicrobial activity of a novel hybrid antimicrobial peptide LFT33 Xingjun Feng, Chunlong Liu, Jiayin Guo, Xueying Song and Jing Li, et al. Download PDF (306.5 KB) View HTML

Open Access Synthesis of heparosan oligosaccharides by Pasteurella multocida PmHS2 single- action Anaïs A. E. Chavaroche, Lambertus A. M. van den Broek, Carmen Boeriu and Gerrit Eggink Download PDF (477.8 KB) View HTML Supplemental

Characterization of a thermostable β-glucuronidase from Thermotoga maritima expressed in Arabidopsis thaliana Jing Xu, Yong-Sheng Tian, Ri-He Peng, Bo Zhu and Jian-Jie Gao, et al. Aquaculture Journals Page: 97 of 331

Aquaculture Journals – Table of Contents

Download PDF (631.4 KB) View HTML Supplemental

In search of sustainable chemical processes: cloning, recombinant expression, and functional characterization of the 7α- and 7β-hydroxysteroid dehydrogenases from Clostridium absonum Erica Elisa Ferrandi, Giulia Maria Bertolesi, Fausto Polentini, Armando Negri and Sergio Riva, et al. Download PDF (627.7 KB) View HTML Supplemental

Stability, oviposition attraction, and larvicidal activity of binary toxin from Bacillus sphaericus expressed in Escherichia coli Luciano da Silva Pinto, Relber Aguiar Gonçales, Fabricio Rochedo Conceição, Paula Ferreira Knabah and Sibele Borsuk, et al. Download PDF (350.8 KB) View HTML

Applied genetics and molecular biotechnology

Determining novel molecular markers in the Chinese caterpillar fungus Ophiocordyceps sinensis by screening a shotgun genomic library Yong-Jie Zhang, Fei-Rong Bai, Shu Zhang and Xing-Zhong Liu Download PDF (193.7 KB) View HTML Supplemental

Upconversion nanoparticles modified with aminosilanes as carriers of DNA vaccine for foot-and-mouth disease Huichen Guo, Rongzeng Hao, Haisheng Qian, Shiqi Sun and Dehui Sun, et al. Download PDF (435.2 KB) View HTML

Applied Microbial and Cell Physiology

The effects of pH oscillation on Lactobacillus rhamnosus batch cultivation Janne Wallenius, Dorothee Barth and Tero Eerikäinen Download PDF (513.8 KB) View HTML

Isolation and characterization of Staphylococcus sp. strain NBRIEAG-8 from arsenic contaminated site of West Bengal Shubhi Srivastava, Praveen C. Verma, Ankit Singh, Manisha Mishra and Namrata Singh, et al. Download PDF (986.6 KB) View HTML

Aoyap1 regulates OTA synthesis by controlling cell redox balance in Aspergillus ochraceus Massimo Reverberi, Katia Gazzetti, Federico Punelli, Marzia Scarpari and Slaven Zjalic, et al. Download PDF (565.2 KB) View HTML

Methods and Protocols

Two-step denaturing gradient gel electrophoresis (2S-DGGE), a gel-based strategy to capture full-length 16S rRNA gene sequences Shanquan Wang and Jianzhong He Download PDF (424.4 KB) View HTML

Environmental biotechnology

SMP production by activated sludge in the presence of a metabolic uncoupler, 3,3′,4′,5-tetrachlorosalicylanilide (TCS) Yan Li, Ai-Min Li, Juan Xu, Bing Liu and Li-Chun Fu, et al.

Aquaculture Journals Page: 98 of 331

Aquaculture Journals – Table of Contents

Download PDF (288.6 KB) View HTML

Assessing the impact of alumina nanoparticles in an anaerobic consortium: methanogenic and humus reducing activity Luis H. Alvarez and Francisco J. Cervantes Download PDF (730.6 KB) View HTML Supplemental

Effects of dissolved organic matter (DOM) at environmentally relevant carbon concentrations on atrazine degradation by Chelatobacter heintzii SalB Karlien Cheyns, Jasper Calcoen, Fabrice Martin-Laurent, David Bru and Erik Smolders, et al. Download PDF (388.3 KB) View HTML

Evaluation of the toxic effects of arsenite, chromate, cadmium, and copper using a battery of four bioassays Kyung-Seok Ko, Pyeong-Koo Lee and In Chul Kong Download PDF (237.1 KB) View HTML

Quantification and characterization of β-lactam resistance genes in 15 sewage treatment plants from East Asia and North America Ying Yang, Tong Zhang, Xu-Xiang Zhang, Da-Wei Liang and Ming Zhang, et al. Download PDF (204.7 KB) View HTML Supplemental

Bioenergy and Biofuels

Thermotolerant Kluyveromyces marxianus and Saccharomyces cerevisiae strains representing potentials for bioethanol production from Jerusalem artichoke by consolidated bioprocessing Nan Hu, Bo Yuan, Juan Sun, Shi-An Wang and Fu-Li Li Download PDF (429.3 KB) View HTML

Retraction Note

Retraction Note to: Antituberculars which target decaprenylphosphoryl-β-D- ribofuranose 2'-oxidase DprE1: state of art Silvia Buroni, Maria Rosalia Pasca, Ana Luisa de Jesus Lopes Ribeiro, Giulia Degiacomi and Elisabetta Molteni, et al. Download PDF (53.0 KB) View HTML Previous – Top – Next

VOLUME 95, PART 6, SEPTEMBER 2012 Website

Research Articles

Mini-Review

Biosynthesis and metabolic pathways of pivalic acid Tomáš Řezanka, Irena Kolouchová, Alena Čejková and Karel Sigler Download PDF (234.5 KB) View HTML

Engineering yeasts for raw starch conversion W. H. van Zyl, M. Bloom and M. J. Viktor Download PDF (682.1 KB) View HTML

The chromatin code of fungal secondary metabolite gene clusters Aquaculture Journals Page: 99 of 331

Aquaculture Journals – Table of Contents

Agnieszka Gacek and Joseph Strauss Download PDF (566.7 KB) View HTML

Current state and perspectives on erythropoietin production Jae Seong Lee, Tae Kwang Ha, Seung Joo Lee and Gyun Min Lee Download PDF (530.9 KB) View HTML

Biotechnological production of arbutins (α- and β-arbutins), skin-lightening agents, and their derivatives Dong-Ho Seo, Jong-Hyun Jung, Jae-Eun Lee, Eun-Jung Jeon and Wooki Kim, et al. Download PDF (209.3 KB) View HTML

Open Access Application of microorganisms towards synthesis of chiral terpenoid derivatives Renata Kuriata-Adamusiak, Daniel Strub and Stanisław Lochyński Download PDF (259.9 KB) View HTML

Biotechnological products and process engineering

Prophylactic and therapeutic efficacy of the epitope vaccine CTB-UA against Helicobacter pylori infection in a BALB/c mice model Le Guo, Kunmei Liu, Guangxian Xu, Xiaokang Li and Jiajie Tu, et al. Download PDF (460.5 KB) View HTML

Yeast cells as microcapsules. Analytical tools and process variables in the encapsulation of hydrophobes in S. cerevisiae Federica Ciamponi, Craig Duckham and Nicola Tirelli Download PDF (780.7 KB) View HTML Supplemental

Novel whole-cell biocatalysts with recombinant hydroxysteroid dehydrogenases for the asymmetric reduction of dehydrocholic acid Michael Braun, Boqiao Sun, Bernd Anselment and Dirk Weuster-Botz Download PDF (716.8 KB) View HTML

Biotechnologically relevant enzymes and proteins

Directed evolution and structural prediction of cellobiohydrolase II from the thermophilic fungus Chaetomium thermophilum Xiu-Juan Wang, Yan-Jie Peng, Li-Qing Zhang, An-Na Li and Duo-Chuan Li Download PDF (472.5 KB) View HTML

Open Access Expanding the set of rhodococcal Baeyer–Villiger monooxygenases by high- throughput cloning, expression and substrate screening A. Riebel, H. M. Dudek, G. de Gonzalo, P. Stepniak and L. Rychlewski, et al. Download PDF (234.5 KB) View HTML Supplemental

Efficient biocatalyst for large-scale synthesis of cephalosporins, obtained by combining immobilization and site-directed mutagenesis of penicillin acylase Davide A. Cecchini, Roberto Pavesi, Sara Sanna, Simona Daly and Roberto Xaiz, et al. Download PDF (296.3 KB) View HTML

Applied genetics and molecular biotechnology

Aquaculture Journals Page: 100 of 331

Aquaculture Journals – Table of Contents

Characterization of porcine circovirus type 2 (PCV2) capsid particle assembly and its application to virus-like particle vaccine development Pei-Ching Wu, Wei-Li Lin, Chi-Ming Wu, Jiun-Ni Chi and Maw-Sheng Chien, et al. Download PDF (424.8 KB) View HTML

Generation of an actagardine A variant library through saturation mutagenesis Steven Boakes, Tania Ayala, Mark Herman, Antony N. Appleyard and Michael J. Dawson, et al. Download PDF (271.3 KB) View HTML

Genomics, Transcriptomics, Proteomics

Rhamnolipid production: effect of oxidative stress on virulence factors and proteome of Pseudomonas aeruginosa PA1 Graziela Jardim Pacheco, Rodrigo Siqueira Reis, Ana Carolina Loureiro Brito Fernandes, Surza Lucia Gonçalves da Rocha and Marcos Dias Pereira, et al. Download PDF (328.0 KB) View HTML

Applied microbial and cell physiology

High-temperature sorbose fermentation with thermotolerant Gluconobacter frateurii CHM43 and its mutant strain adapted to higher temperature Hiromi Hattori, Toshiharu Yakushi, Minenosuke Matsutani, Duantip Moonmangmee and Hirohide Toyama, et al. Download PDF (844.8 KB) View HTML

Adaptation dynamics of Clostridium butyricum in high 1,3-propanediol content media Afroditi Chatzifragkou, George Aggelis, Chryssavgi Gardeli, Maria Galiotou-Panayotou and Michael Komaitis, et al. Download PDF (406.5 KB) View HTML

Transcriptional and preliminary functional analysis of the six genes located in divergence of phoR/phoP in Streptomyces lividans Emmanuelle Darbon, Cécile Martel, Aleksandra Nowacka, Sylvine Pegot and Patrice L. Moreau, et al. Download PDF (571.3 KB) View HTML

Identification of nicotine biotransformation intermediates by Agrobacterium tumefaciens strain S33 suggests a novel nicotine degradation pathway Shuning Wang, Haiyan Huang, Kebo Xie and Ping Xu Download PDF (609.9 KB) View HTML

Methods and Protocols

A universal primer multiplex PCR method for typing of toxinogenic Pseudomonas aeruginosa Hui Shi, Quoclinh Trinh, Wentao Xu, Baiqiang Zhai and Yunbo Luo, et al. Download PDF (307.9 KB) View HTML

Environmental biotechnology

Plant exudates promote PCB degradation by a rhodococcal rhizobacteria Jean-Patrick Toussaint, Thi Thanh My Pham, Diane Barriault and Michel Sylvestre Download PDF (407.7 KB) View HTML

Aquaculture Journals Page: 101 of 331

Aquaculture Journals – Table of Contents

Surface display of monkey metallothionein α tandem repeats and EGFP fusion protein on Pseudomonas putida X4 for biosorption and detection of cadmium Xiaochuan He, Wenli Chen and Qiaoyun Huang Download PDF (1.0 MB) View HTML Supplemental

Changes in functional diversity of soil microbial community with addition of antibiotics sulfamethoxazole and chlortetracycline Feng Liu, Jinshui Wu, Guang-Guo Ying, Zhuanxi Luo and Hong Feng Download PDF (715.3 KB) View HTML

Selection of a whole-cell biocatalyst for methyl parathion biodegradation Jijian Yang, Ruihua Liu, Hong Jiang, Yao Yang and Chuanling Qiao Download PDF (289.4 KB) View HTML

Performances of two biotrickling filters in treating H2S-containing waste gases and analysis of corresponding bacterial communities by pyrosequencing Jianjun Li, Guangyun Ye, Duanfang Sun, Guoping Sun and Xiaowei Zeng, et al. Download PDF (327.7 KB) View HTML

Bioenergy and Biofuels

Molecular cloning, purification, and characterization of a novel polyMG-specific alginate responsible for alginate MG block degradation in Stenotrophomas maltophilia KJ-2 Su In Lee, Sung Hee Choi, Eun Yeol Lee and Hee Sook Kim Download PDF (524.9 KB) View HTML

Previous – Top – Next

Aquaculture Journals Page: 102 of 331

Aquaculture Journals – Table of Contents

AAAqqquuuaaa

VOLUME 48, ISSUE 4, AUGUST 1999 Website

No new issue available

Previous – Top – Next

Aquaculture Journals Page: 103 of 331

Aquaculture Journals – Table of Contents

AAAqqquuuaaacccuuullltttuuurrreee

VOLUME 350-353, ISSUE , MAY 2012 Website

Research articles

Review

Effects of sex steroids on expression of myostatin in rare minnow, Gobiocypris rarus Yuhui Yang, Kou Peng, Xiaoyan Liu, Dongmei Zhao, Jundan Duan, Wei Hu, Haobin Zhao Show preview | PDF (2589 K) | Related articles | Related reference work articles Highlights ► MSTN1 named GrMSTN was isolated from rare minnow, Gobiocypris rarus. ► GrMSTN is maternal factor and expressed ubiquitously in adult tissues in rare minnow. ► 1 μg/L sex steroids significantly decrease body growth and increase MSTN expression. ► It is suggested that sex steroids can affect body growth through MSTN expression.

Tracing the flux of aquaculture-derived organic wastes in the southeast arm of Lake Malawi using carbon and nitrogen stable isotopes Mangaliso J. Gondwe, Stephanie J. Guildford, Robert E. Hecky Show preview | PDF (724 K) | Related articles | Related reference work articles Highlights ► Traced the flux of cage organic wastes into the planktonic and benthic food webs. ► Biota near the fish cages exploited the cage wastes as a source of organic C and N. ► Confirmed accumulation of cage wastes on sediments below the fish cages. ► Resident wild may be the best monitors for the cage wastes in Lake Malawi.

Decreased level of crustacean hyperglycemic hormone (CHH) in black tiger shrimp Penaeus monodon suffering from Monodon Slow-Growth Syndrome (MSGS) Benjamart Pratoomthai, Waraporn Sakaew, Apinunt Udomkit, Kanokpan Wongprasert, Ernest S. Chang, Boonsirm Withyachumnarnkul Show preview | PDF (494 K) | Related articles | Related reference work articles Highlights ► The level of CHH peptide of small-MSGS shrimp was lowered in the hemolymph. ► The level of glycogen in the hepatopancreas of small-MSGS shrimp was increased. ► The glucose level in the hemolymph of small-MSGS was decreased.

Assessment of dietary supplementation with carvacrol or thymol containing feed additives on performance, intestinal microbiota and antioxidant status of rainbow trout (Oncorhynchus mykiss) I. Giannenas, El. Triantafillou, S. Stavrakakis, M. Margaroni, S. Mavridis, T. Steiner, E. Karagouni Show preview | PDF (311 K) | Related articles | Related reference work articles Highlights ► We studied the use of carvacrol and thymol as alternative GPs in rainbow trout. ► The thymol group presented a significantly lower FCR value than the control group. ►

Aquaculture Journals Page: 104 of 331

Aquaculture Journals – Table of Contents

Lactobacillus loads were higher in carvacrol group compared to control group. ► Thymol and carvacrol significantly improved antioxidant status in trout. ► Thymol and carvacrol significantly improved innate immunity parameters.

Estimated time change of dissolved oxygen and carbon dioxide concentrations in the interstitial water of red sea bream, Pagrus major, egg aggregation Yoshifumi Sawada, Kuzuhiro Higuchi, Tomoki Honryo, Yasuo Agawa, Hirokazu Shiba, Tatsuo Yokoyama, Hidemi Kumai Show preview | PDF (328 K) | Related articles | Related reference work articles Highlights ► Hypoxia and hypercapnia during embryonic development cause malformations in fishes. ► These environmental stresses occur in the interstitial water of floating egg aggregation. ► Hypoxia below 10% oxygen saturation occurred within 21 seconds in such egg aggregation. ► Hypercapnia more than 135 mgCO2/L occurred within 60 minutes. ► Careful egg handling is necessary to prevent fish malformations in aquaculture.

Characterization and expression of the gyrA gene from quinolone resistant Yersinia ruckeri strains isolated from Atlantic (Salmo salar L.) in Norway Syed Q.A. Shah, Süheyla Karatas, Hanne Nilsen, Terje M. Steinum, Duncan J. Colquhoun, Henning Sørum Show preview | PDF (186 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Quinolone resistance in Y. ruckeri from farmed Atlantic salmon involves the gyrA gene. ► The point mutation replaces serine by arginine at position 83 in the GyrA protein. ► None of the plasmid encoded genes qnrA, qnrB and qnrS1 were present in the isolates. ► Expression studies suggest dominance of wild type gyrA over the mutant allele.

Sodium taurocholate, a novel effective feed‐additive for promoting absorption and pigmentation of astaxanthin in blood parrot (Cichlasoma synspilum ♀ × Cichlasoma citrinellum ♂) Huiyun Yang, Xidong Mu, Du Luo, Yinchang Hu, Hongmei Song, Chao Liu, Jianren Luo Show preview | PDF (430 K) | Related articles | Related reference work articles Highlights ► A novel effective feed-additive in blood parrot was found. ► Sodium taurocholate can improve the pigmenting efficacy of astaxanthin. ► Sodium taurocholate can enhance the physical fitness of ornamental fish. ► Sodium taurocholate can reduce feed costs and production promotion.

Impact of carbon dioxide level, water velocity, strain, and feeding regimen on growth and fillet attributes of cultured rainbow trout (Oncorhynchus mykiss) A.W. Hafs, P.M. Mazik, P.B. Kenney, J.T. Silverstein Show preview | PDF (424 K) | Related articles | Related reference work articles Highlights ► Fillet weight and percent fat from high CO2 tanks was lower than from low CO2 tanks. ► Fish fed 3 times/day were larger and fatter than fish fed 1 time/day. ► High feed/high CO2 tank fish were larger and fatter than low feed/low CO2 tank fish. ► Velocity and strain had little affect on whole wet weight or fillet attributes.

Aquaculture Journals Page: 105 of 331

Aquaculture Journals – Table of Contents

Influence of age of female gilthead seabream (Sparus aurata L.) broodstock on spawning quality throughout the reproductive season S. Jerez, C. Rodríguez, J.R. Cejas, M.V. Martín, A. Bolaños, A. Lorenzo Show preview | PDF (229 K) | Related articles | Related reference work articles Highlights ► The effect of age of female Sparus aurata broodstock on spawning quality was studied. ► Eggs and larvae showed better or equal quality in younger than in older females. ► Relative fecundity and fertilization rate were higher for younger females. ► Hatching rate and yolk sac volume were not affected by female age. ► Total lipid and fatty acids of eggs were affected by female age and spawning season.

Elongation of long-chain fatty acids in rabbitfish Siganus canaliculatus: Cloning, functional characterisation and tissue distribution of Elovl5- and Elovl4-like elongases Óscar Monroig, Shuqi Wang, Liang Zhang, Cuihong You, Douglas R. Tocher, Yuanyou Li Show preview | PDF (788 K) | Related articles | Related reference work articles Highlights ► Rabbitfish possess at least two fatty acid elongases. ► The elongases were functionally characterised as Elovl5 and Elovl4 types. ► The elongases possess all the activities necessary for the biosynthesis of DHA. ► Elovl4 is capable of synthesising very long-chain fatty acids up to C36 in length. ► Rabbitfish represent a marine fish not dependent upon dietary EPA and DHA.

Tolerance of signal crayfish (Pacifastacus leniusculus) to Persteril 36 supports use of peracetic acid in astaciculture Antonín Kouba, Iryna Kuklina, Hamid Niksirat, Jana Máchová, Pavel Kozák Show preview | PDF (175 K) | Related articles | Related reference work articles Highlights ► Acute toxicity of Persteril 36 to the signal crayfish was evaluated. ► High tolerance of target crayfish to this PAA-containing product was found. ► Results support widespread use of peracetic acid in crayfish culture. ► Treated diseases might include e.g. crayfish plague and saprolegniosis on eggs.

Enhanced growth of farmed Arctic charr (Salvelinus alpinus) following a short- day photoperiod Snorri Gunnarsson, Albert K. Imsland, Sten I. Siikavuopio, Jón Árnason, Arnþór Gústavsson, Helgi Thorarensen Show preview | PDF (592 K) | Related articles | Related reference work articles Highlights ► We investigate effects of short photoperiods on growth and maturity in Arctic charr. ► Higher growth was found in groups reared at short day. ► Maturation rate was not affected by photoperiod treatment. ► Growth improved due to higher feed intake and improved feed conversion efficiency.

Polydorid species (Polychaeta: Spionidae) associated with commercially important mollusk shells in Korean waters W. Sato-Okoshi, K. Okoshi, B.-S. Koh, Y.-H. Kim, J.-S. Hong Show preview | PDF (1771 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 106 of 331

Aquaculture Journals – Table of Contents

Highlights ► Polychaetes from mollusk shells were described for the first time from Korean waters. ► Polydora haswelli is recorded for the first time in Asian waters. ► Wild and cultured and oysters were heavily infested by Polydora. ► P. uncinata is suggested to be transported with oysters introduced to the area.

Essential oil of Ocimum gratissimum L.: Anesthetic effects, mechanism of action and tolerance in silver , Rhamdia quelen Lenise de Lima Silva, Thaylise Vey Parodi, Patrícia Reckziegel, Viviane de Oliveira Garcia, Marilise Escobar Bürger, Bernardo Baldisserotto, Carlos Augusto Malmann, Ana Maria Soares Pereira, Berta Maria Heinzmann Show preview | PDF (580 K) | Related articles | Related reference work articles Highlights ► Anesthetic effect of the essential oil of O. gratissimum in R. quelen was verified. ► Eugenol and β-bisabolene were the major compounds of the essential oil (EO). ► Deep anesthesia was obtained at concentrations of 30–300 mg L–1. ► The EO seems to act on the GABAA– benzodiazepine receptor. ► Tolerance occurred in fish exposed to EO and BDZ after the fifth exposure.

The effect of temperature on the survival, growth, photosynthesis, and respiration of young seedlings of eelgrass Zostera marina L. Shuna Niu, Peidong Zhang, Jie Liu, Dong Guo, Xiumei Zhang Show preview | PDF (757 K) | Related articles | Related reference work articles Highlights ► We investigate the effect of temperature on young eelgrass seedlings. ► Optimum temperature range for young eelgrass seedling growth is 16–17 °C. ► Temperature fluctuations promote the development and growth of young seedlings. ► Optimum temperature for net photosynthesis of young eelgrass seedlings is 20 °C. ► Temperature negatively affects photosynthetic pigment contents of young seedlings.

Effect of complete replacement of fishmeal by dehulled soybean meal with crude attractants supplementation in diets for red sea bream, Pagrus major Md. Abdul Kader, Mahbuba Bulbul, Shunsuke Koshio, Manabu Ishikawa, Saichiro Yokoyama, Binh Thanh Nguyen, Connie Fay Komilus Show preview | PDF (286 K) | Related articles | Related reference work articles Highlights ► We developed non fishmeal practical diet for red sea bream, Pagrus major. ► Fishmeal protein was completely replaced with dehulled soybean meal. ► Supplementation of crude attractant eliminated the need for crystalline amino acids. ► Carcass composition or health condition of fish was not affected by the treatments.

The importance of selective breeding in aquaculture to meet future demands for animal protein: A review Trygve Gjedrem, Nick Robinson, Morten Rye Show preview | PDF (380 K) | Related articles | Related reference work articles Highlights ► We demonstrate existence of vast potential for increased aquaculture production. ► The largest potential for aquaculture lies in the marine environment. ► Selection responses in aquaculture species are higher than for conventional livestock. ► More use of genetically

Aquaculture Journals Page: 107 of 331

Aquaculture Journals – Table of Contents

improved stocks may dramatically increase aquaculture output. ► Genetically improved stocks are critical for better utilization of limited resources.

Artificial hybridization of Japanese and European eel (Anguilla japonica × A. anguilla) by using cryopreserved sperm from freshwater reared males T. Müller, Á. Horváth, E. Takahashi, B. Kolics, K. Bakos, K. Decsi, B. Kovács, J. Taller, B. Urbányi, M. Bercsényi, L. Horváth, S. Adachi, K. Arai, E. Yamaha Show preview | PDF (438 K) | Related articles | Related reference work articles Highlights ► Viable larvae hatched from A. japonica eggs and cryopreserved sperm of A. anguilla. ► Sperm originated from males maturating in freshwater. ► Hybridization was verified via new PCR-RFLP marker.

Effects of plant-based diets on the distal gut microbiome of rainbow trout (Oncorhynchus mykiss) Atul R. Desai, Matthew G. Links, Stephanie A. Collins, Graeme S. Mansfield, Murray D. Drew, Andrew G. Van Kessel, Janet E. Hill Show preview | PDF (724 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Inclusion of plant ingredients in trout diets altered the distal gut microbiome. ► Firmicutes:Proteobacteria ratios were higher in fish fed plant ingredients. ► Microbiome richness and diversity decreased over the one year course of the study. ► Protein concentrate ingredients are less disruptive to the microbiome than meals.

The effects of bacterial cell suspensions on mussel (Perna canaliculus) larval settlement Annapoorna Maitrayee Ganesan, Andrea C. Alfaro, Colleen M. Higgins, John D. Brooks Show preview | PDF (403 K) | Related articles | Related reference work articles Highlights ► New technique separates bacterial cell surface-bound compounds from biofilm exudates. ► Biofilm cell suspensions with exudates induced mussel larval settlement. ► Biofilm cell suspensions were highly toxic to mussel larvae. ► Bacterial cells without exudates had no effect on larval settlement or mortality. ► Bacterial biofilms without exudates had no effect on larval settlement or mortality.

Preliminary investigation into the contribution of bioflocs on protein nutrition of Litopenaeus vannamei fed with different dietary protein levels in zero-water exchange culture tanks Wu-Jie Xu, Lu-Qing Pan, Da-Hu Zhao, Jie Huang Show preview | PDF (1156 K) | Related articles | Related reference work articles Highlights ► We investigated the contribution of bioflocs on protein nutrition of Litopenaeus vannamei. ► Bioflocs could provide a supplemental source of food protein. ► Bioflocs stimulated digestive proteinases activity in the digestive gland. ► Bioflocs improved feed utilization, protein retention and growth performance. ► Dietary protein level could be reduced to 25% without affecting shrimp growth in the presence of bioflocs.

Artemia protein is processed very fast in Solea senegalensis larvae: A dynamic simulation model

Aquaculture Journals Page: 108 of 331

Aquaculture Journals – Table of Contents

I. Rønnestad, L.E.C. Conceição Show preview | PDF (844 K) | Related articles | Related reference work articles Highlights ► A mechanistic model that simulates AA metabolism of fish larvae was developed. ► Model simulations suggest a sharp dynamic change in the FAA pool after a meal. ► Most Artemia AA are processed within 2 h after ingestion. ► Meal AA have a major contribution to the FAA pool composition. ► The model supports feeding sole larvae at a high frequency to maximize growth.

Assessment of nutritional status and digestive physiology in southern bluefin tuna Thunnus maccoyii fed a modified baitfish diet Melanie J. Leef, Chris G. Carter, Barbara F. Nowak Show preview | PDF (453 K) | Related articles | Related reference work articles Highlights ► First report of nutritional status for southern bluefin tuna. ► Vitamin/immunostimulant supplements did not affect trypsin or chymotrypsin activities. ► Digestive strategy of low stomach pH for rapid digestion of a meal.

Effect of three innovative culture systems on water quality and whitespot syndrome virus (WSSV) viral load in WSSV-fed Penaeus monodon cultured in indoor tanks Eleonor A. Tendencia, Roel H. Bosma, Lynbelle Rose Sorio Show preview | PDF (434 K) | Related articles | Related reference work articles Highlights ► WSSV viral load decreased from 101 to 100 WSSV/mg in greenwater prepared treatment. ► Viral load increased 5x but shrimp survival was highest in the Chlorella seeded water. ► Viral load increased 5x water but N2 wastes concentration was lowest in the molasses added.

Dietary arginine requirement of juvenile yellow grouper Epinephelus awoara Qi-Cun Zhou, Wen-Ping Zeng, Hua-Lang Wang, Feng-Jun Xie, Tuo-Wang, Chang-Qu Zheng Show preview | PDF (272 K) | Related articles | Related reference work articles Highlights ► The minimum dietary arginine requirement of yellow grouper was 2.59% dry matter. ► Dietary arginine levels significantly influenced the EAAs composition in muscle. ► Dietary arginine levels didn't significantly influence red blood cell, hemoglobin and haematocrit.

Response of channel × blue hybrid catfish to chronic diurnal hypoxia Bartholomew W. Green, Steven D. Rawles, Benjamin H. Beck Show preview | PDF (775 K) | Related articles | Related reference work articles Highlights ► Nightly dissolved oxygen affects channel x blue hybrid catfish productivity. ► Duration of exposure proposed as new independent variable. ► Chronic nightly hypoxia affected daily feed consumption. ► Lipid was the primary depot affected by hypoxia. ► Citrate synthase activity was 14.6% higher at highest versus lowest dissolved oxygen.

Molecular cloning and characterization of the myostatin gene in a cultivated variety of bay scallop, Argopecten irradians

Aquaculture Journals Page: 109 of 331

Aquaculture Journals – Table of Contents

Lin Guo, Li Li, Shoudu Zhang, Guofan Zhang Show preview | PDF (1789 K) | Related articles | Related reference work articles Highlights ► The myostatin gene from the "Zhongkehong" variety of the bay scallop is reported. ► The genomic organization is similar to that of MSTN genes in other species. ► Ai-MSTN is highly expressed in adductor muscle. ► The 3D structure of the mature peptide resembles that of mouse MSTN.

A first-generation linkage map of the Pacific lion-paw scallop (Nodipecten subnodosus): Initial evidence of QTL for size traits and markers linked to orange shell color Jessica L. Petersen, Melinda R. Baerwald, Ana M. Ibarra, Bernie May Show preview | PDF (480 K) | Supplementary content | Related articles | Related reference work articles Highlights ► A genetic linkage map was created from 85 progeny of a single-pairwise mating. ► 264 AFLPs and 56 microsatellites are in the final map, which has 22 linkage groups. ► QTL mapping found preliminary evidence for linkage to size traits. ► Orange shell color was mapped to a 1 cM region of one linkage group. ► The results indicate that marker assisted selection may be feasible in this species.

Previous – Top – Next

VOLUME 354-355, ISSUE , MAY 2012 Website

Research articles

Review

Fasting and re-feeding impact on leptin and aquaglyceroporin 9 in the liver of European sea bass (Dicentrarchus labrax) C. Gambardella, L. Gallus, A. Amaroli, G. Terova, M.A. Masini, S. Ferrando Show preview | PDF (1842 K) | Related articles | Related reference work articles

Study of the effects of thermal regime and alternative hormonal treatments on the reproductive performance of European eel males (Anguilla anguilla) during induced sexual maturation V. Gallego, I. Mazzeo, M.C. Vílchez, D.S. Peñaranda, P.C.F. Carneiro, L. Pérez, J.F. Asturiano Show preview | PDF (442 K) | Related articles | Related reference work articles

13C and 15N analysis in muscle and liver of wild and reared young-of-the-year (YOY) Atlantic bluefin tuna J.L. Varela, F. de la Gándara, A. Ortega, A. Medina Show preview | PDF (282 K) | Related articles | Related reference work articles Highlights ► Stable isotope analysis (SIA) proves useful in young tuna trophic biology studies. ► Removal of results in depleted C:N, and enriched δ13C and δ15N values. ► Lipid Aquaculture Journals Page: 110 of 331

Aquaculture Journals – Table of Contents

extraction causes significantly increased Δ13C values but no change in Δ15N. ► The estimated discrimination factors for muscle are Δ13C = 0.32 and Δ15N = 1.46. ► The estimated discrimination factors for liver are Δ13C = 0.39 and Δ15N = 1.62.

Evaluation of traditional diet and corn gluten feed substituted alternative diet for pond-raised hybrid catfish on production and xanthophyll level Bochao Hu, Matthew Ferrell, Chhorn E. Lim, D. Allen Davis Show preview | PDF (204 K) | Related articles | Related reference work articles Highlights ► Evaluate traditional and alternative diets for channel-blue hybrid catfish. ► No significant differences were found in growth performance and feed utilization. ► Intraperitoneal fat ratio was lower in fish fed alternative feeds. ► No significant differences were observed in hematology and immune response. ► Xanthophyll levels in diets and in catfish fillet were linearly related.

Effects of size and temperature on growth and feed conversion of juvenile green sea urchin (Strongylocentrotus droebachiensis) Sten Ivar Siikavuopio, Philip James, Hege Lysne, Bjørn Steinar Sæther, Tor Andreas Samuelsen, Atle Mortensen Show preview | PDF (365 K) | Related articles | Related reference work articles Highlights ► The feed intake increased with increasing size and temperature. ► The specific feed intake decreased with increasing size. ► Feed conversion ratio was significantly affected by temperature. ► In conclusion, the present study shows that a rearing temperature of 10 °C appears to be optimal for juvenile green sea urchins.

Estimation of genetic parameters for body weights of Nile tilapia Oreochromis niloticus using random regression models Eduardo Maldonado Turra, Denise Aparecida Andrade de Oliveira, Bruno Dourado Valente, Edgar de Alencar Teixeira, Samuel de Assis Prado, Daniela Chemim de Melo, Arthur Francisco Araújo Fernandes, Érika Ramos de Alvarenga, Martinho de Almeida e Silva Show preview | PDF (1026 K) | Related articles | Related reference work articles Highlights ► RRM more adequately describe growth than repeatability and multitrait models. ► Heritabilities for weight ranged from low to high during the age interval examined. ► Family effect in the model resulted in lower estimates of additive genetic variance. ► Genetic correlations between weights at different ages are quite almost high.

Antimicrobial susceptibility and plasmid profiles of psychrophilum strains isolated in Chile Hernán Henríquez-Núñez, Oscar Evrard, Göran Kronvall, Ruben Avendaño-Herrera Show preview | PDF (493 K) | Related articles | Related reference work articles Highlights ► We studied in vitro susceptibility and MIC of Chilean F. psychrophilum isolates. ► We demonstrated by MIC that resistance to OTC, FLO and OXA among Chilean isolates is high. ► Disk contents for disk diffusion tests were not suitable for this bacterium. ► There was no clear correlation between drug resistance and plasmid content. ► Surveillance in the use of drugs is recommended as well as additional pharmacokinetics studies.

Aquaculture Journals Page: 111 of 331

Aquaculture Journals – Table of Contents

Bivalent vaccination of sex reversed hybrid tilapia against and Vibrio vulnificus Craig A. Shoemaker, Benjamin R. LaFrentz, Phillip H. Klesius Show preview | PDF (333 K) | Related articles | Related reference work articles Highlights ► Streptococcus iniae and Vibrio vulnificus cause disease in tilapia aquaculture. ► We tested the ability of a bivalent vaccine to protect tilapia from disease. ► RPS ranged from 79 to 89% against V. vulnificus and 69 to 100% against S. iniae. ► The bivalent vaccine may be a cost-effective strategy to reduce losses in tilapia.

A defatted microalgae (Haematococcus pluvialis) meal as a protein ingredient to partially replace fishmeal in diets of Pacific white shrimp (Litopenaeus vannamei, Boone, 1931) Zhi Yong Ju, Dong-Fang Deng, Warren Dominy Show preview | PDF (240 K) | Related articles | Related reference work articles Highlights ► Effects of partial replacement of fishmeal protein with a defatted microalgae protein in shrimp diet. ► No negatively affecting shrimp performance. ► Improving shrimp pigmentation due to carotenoids in the microalgae meal. ► Defatted microalgae as a valuable alternative protein ingredient for shrimp feed.

Performance of single and multi-strain probiotics during hatchery production of Greenshell™ mussel larvae, Perna canaliculus Aditya Kesarcodi-Watson, Heinrich Kaspar, M. Josie Lategan, Lewis Gibson Show preview | PDF (415 K) | Related articles | Related reference work articles Highlights ► We tested multi-strain probiotic administration in aquaculture. ► We tested during normal hatchery rearing and against pathogen challenge. ► We found no additional benefit from multi-strain use compared to single-strain use.

Influence of temperature and exposure time on the infectivity of Bohle iridovirus, a ranavirus K. La Fauce, E. Ariel, S. Munns, C. Rush, L. Owens Show preview | PDF (204 K) | Related articles | Related reference work articles Highlights ► Declines in BIV infectivity were largely between 40 °C and 44 °C and > 52 °C. ► Temperature tolerance of ranaviruses much higher than previously thought (32 °C). ► Thermal environment important for determining ranavirus distribution. ► Findings fundamental for understanding ranavirus indirect transmission dynamics. ► Findings have ramifications for biosecurity measures (eg. containment, control).

Mixtures of lupin and pea protein concentrates can efficiently replace high- quality fish meal in extruded diets for juvenile black sea bream (Acanthopagrus schlegeli) Yuexing Zhang, Margareth Øverland, Shouqi Xie, Zhiyong Dong, Zhenming Lv, Junzhuo Xu, Trond Storebakken Show preview | PDF (253 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 112 of 331

Aquaculture Journals – Table of Contents

► FCR of 1.1 in black sea bream fed extruded diets with plant protein concentrates. ► Black sea bream grew from 13 to 46 g in 60 days on plant protein concentrate diets. ► Any mixture of lupin and pea proteins can be used at 300 g kg− 1 protein replacement. ► Combinations high in pea protein rather than lupin are preferred at high dietary inclusion.

Annual recruitment, rates and biocontrol of caudata (: ) in suspended enclosure culture of the pearl oyster Pinctada imbricata Carmen Malavé, Luis Freites, Cesar Lodeiros, Jeremy Mendoza, Luis Troccoli, Andrew W. Dale Show preview | PDF (1442 K) | Related articles | Related reference work articles Highlights ► We present data on recruitment of Linatella caudata in culture of Pinctada imbricata. ► Also present results on predation rates of Linatella caudata on Pinctada imbricata. ► We analyze influence of environmental variables on Linatella caudata recruitment. ► Sea urchins were used as an effective biocontrol on L. caudata recruitment rates. ► We present a review of L. caudata predation on cultured bivalves worldwide.

Integration of blue mussel (Mytilus edulis Linnaeus, 1758) with western king prawn (Penaeus latisulcatus Kishinouye, 1896) in a closed recirculating aquaculture system under laboratory conditions Le Van Khoi, Ravi Fotedar Show preview | PDF (202 K) | Related articles | Related reference work articles Highlights ► Inclusion of Mytilus edulis into Penaeus latisulcatus culture tanks was examined. ► The integrated aquaculture trial was conducted under laboratory conditions. ► remove significantly total suspended solids and total bacteria. ► Mussel growth is positively correlated with the increasing stocking densities. ► Mussels can grow and survive in the closed integrated culture system.

Optimization of monoclonal production of the glass anemone Aiptasia pallida (Agassiz in Verrill, 1864) Miguel Costa Leal, Cristóvão Nunes, Sofia Engrola, Maria Teresa Dinis, Ricardo Calado Show preview | PDF (1203 K) | Related articles | Related reference work articles Highlights ► Best anemone culture conditions: 26 °C, total darkness and Artemia nauplii. ► High density enhances anemone propagation, increasing the number of small anemones. ► Low stocking densities enhance anemone biomass production.

The application of bioflocs technology in high-intensive, zero exchange farming systems of Marsupenaeus japonicus Pei Zhao, Jie Huang, Xiu-Hua Wang, Xiao-Ling Song, Cong-Hai Yang, Xu-Guang Zhang, Guo-Cheng Wang Show preview | PDF (823 K) | Related articles | Related reference work articles Highlights ► Bioflocs technology can maintain good water quality. ► Bioflocs technology can reduce feed conversion and increase protein efficiency. ► Bioflocs technology can inhibit potential pathogen and increase shrimp production. ► The predominant microbe was characterized by Bacillus sp. in bioflocs treatment.

Aquaculture Journals Page: 113 of 331

Aquaculture Journals – Table of Contents

Outer membrane protein K as a subunit vaccine against V. anguillarum Mohammed Abdullatif Hamod, Muliya Sankappa Nithin, Yassamin Nahil Shukur, Iddya Karunasagar, Indrani Karunasagar Show preview | PDF (265 K) | Related articles | Related reference work articles Highlights ► The OmpK gene was cloned, overexpressed and the recombinant protein purified. ► Increased serum inhibitory effect was observed in fish vaccinated with OmpK. ► Specificity by western blot and high titer of antibody in rabbit and fish was observed. ► The relative percent survival of OmpK vaccinated fish was significant. ► OmpK offers protection against V. anguillarum infection in fish

Parasitology of juvenile mullet (Mugil liza) and effect of formaldehyde on parasites and host Eduardo Pahor-Filho, Kleber Campos Miranda-Filho, Joaber Pereira Júnior Show preview | PDF (224 K) | Related articles | Related reference work articles Highlights ► New data on mullet parasites. ► New data on parasite control with formaldehyde. ► New data on acute toxicity of formaldehyde to juvenile mullet. ► New data on mullet specific tolerance to formaldehyde. ► New data on one hour therapeutic bath for mullets with formaldehyde.

Daily spawning and locomotor activity rhythms of European sea bass broodstock (Dicentrarchus labrax) N. Villamizar, M. Herlin, M.D. López, F.J. Sánchez-Vázquez Show preview | PDF (460 K) | Related articles | Related reference work articles Highlights ► We investigated daily rhythms of locomotor activity and spawning in sea bass. ► Activity rhythms were nocturnal during spawning, but diurnal in the resting period. ► Spawning occurred at night with two peaks at 6 and 11 hours after lights off. ► Egg viability was highest in the batch released around the spawning peaks.

Albumin and globulin rapeseed protein fractions as fish meal alternative in diets fed to rainbow trout (Oncorhynchus mykiss W.) Florian Nagel, Hanno Slawski, Halime Adem, Ralf-Peter Tressel, Klaus Wysujack, Carsten Schulz Show preview | PDF (217 K) | Related articles | Related reference work articles Highlights ► Rapeseed protein fractions as alternative ingredients in diets fed to rainbow trout. ► ADC of albumin protein was lower than the ADC of fish meal and globulin protein. ► Albumin treatment groups FCR was not affected at all substitution levels. ► Albumin concentrate can effectively replace 50% of dietary fish meal protein. ► Reduced feed intake and fish growth with globulin diets due to higher levels of ANFs.

Culture, yield and bioremediation potential of Palmaria palmata (Linnaeus) Weber & Mohr and Saccharina latissima (Linnaeus) C.E. Lane, C. Mayes, Druehl & G.W. Saunders adjacent to fish farm cages in northwest Scotland J.C. Sanderson, M.J. Dring, K. Davidson, M.S. Kelly Show preview | PDF (527 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 114 of 331

Aquaculture Journals – Table of Contents

Highlights ► Bioremediation potential of two macroalgae were trialled at a Scottish fish farm. ► Palmaria palmata and Saccharina latissima were used for their commercial potential. ► Biomass yields over a season were enhanced by up to 63% next to fish farm cages. ► In summer, nitrogen content of the algae grown next to the fish cages was highest. ► One hectare crop of algae may use 5–12% of the N released from 500 tonnes of fish.

Development stages of androgenic glands in Giant river prawn, Macrobrachium rosenbergii De Man, 1879 in relation to size and age, and the success rate of feminization after andrectomy in small and large size prawn Wikrom Rungsin, Akarapong Swatdipong, Uthairat Na-Nakorn Show preview | PDF (1901 K) | Related articles | Related reference work articles Highlight ► Stages of androgenic gland (AG) development in Giant river prawn were identified. ► Development of AG depended on age and size of the postlarvae. ► Stocking PL at high density extended a period when right stage of PL was available.

Previous – Top – Next

VOLUME 356-357, ISSUE , MAY 2012 Website

Research articles

Review

Ecological and economic costs of supportive breeding: Atlantic salmon (Salmo salar) as a case study Jose Luis Horreo, Jeronimo de la Hoz, Ivan Gonzalez Pola, Gonzalo Machado-Schiaffino, Eva Garcia-Vazquez Show preview | PDF (282 K) | Related articles | Related reference work articles Highlights ► Ecological and economic costs and benefits of supportive breeding were estimated. ► hatchery descendants returning adult were identified by pedigree tests. ► Supportive breeding of Atlantic salmon contributed around 6–11% to sport catches. ► Straying of hatchery-reared individuals was much higher than wild individuals. ► Salmon hatchery descendants in sport catches cost more than €4000.

Triploid Penaeus monodon: Sex ratio and growth rate Pattira Pongtippatee, Karemah Laburee, Pinij Thaweethamsewee, Ratana Hiranphan, Somluk Asuvapongpatana, Wattana Weerachatyanukul, Theera Srisawat, Boonsirm Withyachumnarnkul Show preview | PDF (852 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The best method for triploid induction of Penaeus monodon was cold shock. ► Triploid P. monodon could be cultured from larvae, juvenile, and finally to adult stages. ► Triploid P. monodon grew faster than the diploid ones. ► Sex ratio of the triploid P. monodon was found to be 2 females:1 male. ► Production of triploid P. monodon is commercially feasible.

Relevance of environmental factors and physiological pigment hormones to blind-side hypermelanosis in the cultured flounder, Paralichthys olivaceus Aquaculture Journals Page: 115 of 331

Aquaculture Journals – Table of Contents

Duk-Young Kang, Hyo-Chan Kim Show preview | PDF (1209 K) | Related articles | Related reference work articles Highlights ► High density and dark background accelerated the blind-side hypermelanosis. ► Inhibitory effect of bright background on the hypermelanosis is density-dependent. ► Only when PCA is under 200%, bright background inhibited the hypermelanosis. ► Burrowing substratum prevented actually the spread of the hypermelanosis. ► Malpigmented fish showed high MSH activity and low MCH activity.

Immune parameter changes of hemocytes in green-lipped mussel Perna viridis exposure to hypoxia and hyposalinity Youji Wang, Menghong Hu, S.G. Cheung, P.K.S. Shin, Weiqun Lu, Jiale Li Show preview | PDF (541 K) | Related articles | Related reference work articles Highlights ► Combined effects of DO and salinity on mussel are investigated. ► Flow cytometry are applied to measure the immune responses of hemocytes. ► Hypoxia and salinity have significant effects on the immune responses in mussels.

Seaweed mariculture as a development project in Zanzibar, East Africa: A price too high to pay? Sara Fröcklin, Maricela de la Torre-Castro, Lars Lindström, Narriman S. Jiddawi, Flower E. Msuya Show preview | PDF (1208 K) | Related articles | Related reference work articles Highlights ► farmers presented a significantly poorer health than non-seaweed farmers. ► This was a result of poor working conditions and labor intensive work. ► The income generated from seaweed farming was below the extreme poverty line. ► The activity had high individual costs but low benefits. ► Broader social and ecological issues must be analyzed and not only instant benefits.

Study of perkinsosis in the grooved carpet shell clam Ruditapes decussatus in Galicia (NW Spain). III. The effects of Perkinsus olseni infection on clam reproduction Sandra M. Casas, Antonio Villalba Show preview | PDF (1348 K) | Related articles | Related reference work articles Highlights ► Perkinsus olseni infection inhibited gametogenesis in Ruditapes decussatus. ► Infection intensity correlated with a reduction in the percentage of ripe . ► Perkinsosis reduced the volume fraction of various gonadal components. ► No significant effect of perkinsosis on gonadal index or fecundity was observed.

Spatial variation of benthic infaunal communities in baie de Gaspé (eastern Canada) — Influence of mussel aquaculture Christopher W. McKindsey, Philippe Archambault, Nathalie Simard Show preview | PDF (671 K) | Related articles | Related reference work articles Highlights ► We compare benthic infauna in mussel farms and reference sites at two spatial scales. ► There was no evidence of impacts on farms at the scale of 100 m. ► There was within-farm

Aquaculture Journals Page: 116 of 331

Aquaculture Journals – Table of Contents

(10 m-scale) evidence of impacts within sampling sites. ► Disregarding effects at the 10 m- scale may mask effects in other studies. ► Current farming practices in baie de Gaspé seem to be sustainable.

The first kazal-type serine proteinase inhibitor in the swimming crab Portunus trituberculatus involved in immune response to bacteria and fungi Shuangyan Wang, Zhaoxia Cui, Yuan Liu, Qianqian Li, Chengwen Song Show preview | PDF (1093 K) | Related articles | Related reference work articles Highlights ►No kazal-type serine proteinase inhibitor has been reported from crab. ►A kazal-type inhibitor (PtKPI) was identified from Portunus trituberculatus. ►PtKPI transcript was strongly detected in eyestalk and haemocytes. ►Different expression patterns were showed after challenged by bacteria and fungi.

The effects of tank colour, enrichment and greenwater on the early onset of jaw malformation in striped trumpeter larvae Jennifer M. Cobcroft, Alexander Chong Shu-Chien, Meng-Kiat Kuah, Annette Jaya-Ram, Stephen C. Battaglene Show preview | PDF (1382 K) | Related articles | Related reference work articles Highlights ► We reared striped trumpeter to day 29 with different environments and diets. ► Jaw malformation was highest in white tanks, with clearwater and enriched diet. ► Jaw malformation was low and yield high in black tanks with greenwater. ► Retinoid receptor gene expression was affected by culture conditions and diet. ► Jaw malformation was linked to enrichment and walling behaviour but not feed intake.

Effects of dietary oxidized fish oil with vitamin E supplementation on growth performance and reduction of lipid peroxidation in tissues and blood of red sea bream Pagrus major Jian Gao, Shunsuke Koshio, Manabu Ishikawa, Saichiro Yokoyama, Roger Edward P. Mamauag, Yuzhe Han Show preview | PDF (330 K) | Related articles | Related reference work articles Highlights ► The effects of dietary oxidized fish oil and vitamin E supplementation in red sea bream were studies. ► The growth performance was affected by dietary oxidized fish oil without vitamin E supplementation. ► Increasing dietary vitamin E levels increased vitamin E contents and reduced lipid peroxidation in tissues. ► Supplementation of vitamin E improved growth and reduced tissues lipid peroxidation.

Response of sunshine bass (Morone chrysops x M. saxatilis) to digestible protein/ dietary lipid density and ration size at summer culture temperatures in the Southern United States Steven D. Rawles, Bartholomew W. Green, T. Gibson Gaylord, Frederic T. Barrows, Matthew E. McEntire, Donald W. Freeman Show preview | PDF (421 K) | Related articles | Related reference work articles Highlights ► Hybrid striped bass growth, nutrient retention and excretion at summer temperature. ► Protein, lipid and ration level alter growth, body composition and nutrient retention. ► The

Aquaculture Journals Page: 117 of 331

Aquaculture Journals – Table of Contents

optimum diet did not change with respect to ration (feeding) level. ► At 30 °C, the optimum diet had 40% DP and 18% fat for max growth and min NH4 excretion.

Effects of predator and shelter conditioning on hatchery-reared white seabream Diplodus sargus (L., 1758) released at sea Giovanni D'Anna, Vincenzo Maximiliano Giacalone, Tomás Vega Fernández, Antonino Maurizio Vaccaro, Carlo Pipitone, Simone Mirto, Salvatore Mazzola, Fabio Badalamenti Show preview | PDF (476 K) | Related articles | Related reference work articles Highlights ► Conditioned seabream kept a higher distance from predator than naïve fish. ► Conditioned seabream spent less time to shelter than naïve fish. ► Post-release survival of conditioned seabreams was twice than naïve fish. ► Dispersal of seabream acclimated to refuges resulted lower than in naïve fish.

Dietary bioavailability of cadmium, inorganic mercury, and zinc to a marine fish: Effects of food composition and type Wen-Xiong Wang, Sarayut Onsanit, Fei Dang Show preview | PDF (417 K) | Related articles | Related reference work articles Highlights ► Squid viscera, kelps and rapeseeds had metal-specific contamination. ► Different sources of protein in artificial diets did not affect the metal bioavailability to fish. ► Metal dietary assimilation in fish decreased with increasing dietary metal concentrations. ► Metal additives (Fe and Cu) reduced the dietary Zn assimilation due to metal competition. ► Bioavailability of metals from natural prey was complicated by chemical species and gut pa ssage time.

Effects of fish size and diet adaptation on growth performances and nitrogen utilization of rainbow trout (Oncorhynchus mykiss W.) juveniles given diets based on free and/or protein-bound amino acids Noélie Bodin, Gilles Delfosse, Tran Thi Nang Thu, Eric Le Boulengé, Tarik Abboudi, Yvan Larondelle, Xavier Rollin Show preview | PDF (476 K) | Related articles | Related reference work articles Highlights ► Dietary protein quality depends of the molecular form of the nitrogen in trout. ► This quality is modulated by the ratio of free to protein-bound amino acids. ► Free amino acid utilization depends of juvenile size and diet adaptation. ► Larger fish can tolerated higher free amino acids in their diet than smaller ones. ► Accustomed fish can tolerate higher level of free amino acids in their diet.

Evidence for female heterogametic sex determination in paddlefish Polyodon spathula based on gynogenesis William L. Shelton, Steven D. Mims Show preview | PDF (144 K) | Related articles | Related reference work articles Highlights ► We induced polar-body gynogenesis in paddlefish. ► We stocked 300 yearling gynogenotes in a 26-ha lake. ► We harvested 181 nine-year-old fish. ► Sex ratio was 19.8% male & 80.2% female. ► These data suggest that female paddlefish are heterogametic for sex determination.

Aquaculture Journals Page: 118 of 331

Aquaculture Journals – Table of Contents

A new isoform of anti-lipopolysaccharide factor identified from the blue swimmer crab, Portunus pelagicus: Molecular characteristics and phylogeny V.V. Afsal, Swapna P. Antony, V.N. Sanjeevan, P.R. Anil Kumar, I.S. Bright Singh, Rosamma Philip Show preview | PDF (769 K) | Related articles | Related reference work articles Highlights ► Study reports the first ALF isoform from the blue swimmer crab, Portunus pelagicus. ► Pp-ALF1 has a predicted MW of 13.86 kDa and theoretical pI of 8.49. ► Highly conserved cysteine residues and LPS binding domain were observed in Pp-ALF1. ► Pp-ALF1 showed only 46% identity with the ALFs from Portunus trituberculatus.

Risk assessment of parasitic helminths on cultured Nile tilapia (Oreochromis niloticus, L.) Peter Akoll, Robert Konecny, Wilson W. Mwanja, Fritz Schiemer Show preview | PDF (457 K) | Related articles | Related reference work articles Highlights ► Assessed the importance of lifecycles and water supply in helminth transmission. ► Determined the risk of helminth infestations in cages and ponds. ► Trophic pathway enhanced parasite transmission than free-living style. ► Local source of infective stages was important for ponds and water supply for cages. ► Monoxenous helminths posed higher risk to culture systems than heteroxenous ones.

Digestibility of amino acids in Indian mustard protein concentrate and Indian mustard meal compared to that of a soy protein concentrate in rainbow trout and Atlantic salmon M.A. Kabir Chowdhury, Albert G.J. Tacon, Dominique P. Bureau Show preview | PDF (282 K) | Related articles | Related reference work articles Highlights ► Quality of novel Indian mustard protein protein products in salmonid diets was evaluated. ► Digestibility of crude protein and amino acids from these products are very good. ► These high quality products can be readily incorporated in salmonid feed.

The “n−3 LC-PUFA sparing effect” of modified dietary n−3 LC-PUFA content and DHA to EPA ratio in Atlantic salmon smolt Basseer M. Codabaccus, Chris G. Carter, Andrew R. Bridle, Peter D. Nichols Show preview | PDF (248 K) | Related articles | Related reference work articles Highlights ► We tested deposition of n−3 LC-PUFA in fish fed different dietary EPA:DHA ratios. ► A low EPA:DHA ratio results in more efficient deposition of n−3 LC-PUFA. ► Avoiding surplus dietary n−3 LC-PUFA results in “saving” n−3 LC-PUFA.

The influence of various starch and non-starch polysaccharides on the digestibility of diets fed to rainbow trout (Oncorhynchus mykiss) Brett Glencross, Neil Rutherford, Nicholas Bourne Show preview | PDF (300 K) | Related articles | Related reference work articles Highlights ► The effects of different polysaccharides on diet digestibilities were studied. ► MANOVA noted effects for polysaccharide type, inclusion level and interactions. ► Starch had the least

Aquaculture Journals Page: 119 of 331

Aquaculture Journals – Table of Contents

effect on digestibilities of all the polysaccharides examined. ► At low inclusion levels lignosulphonate was observed to have the greatest impact. ► Different polysaccharide classes can have distinct effects on diet digestibilities.

Effects of bioflocs on growth performance, digestive enzyme activity and body composition of juvenile Litopenaeus vannamei in zero-water exchange tanks manipulating C/N ratio in feed Wu-Jie Xu, Lu-Qing Pan Show preview | PDF (451 K) | Related articles | Related reference work articles Highlights ► Sucrose addition promoted bioflocs in zero-water exchange shrimp culture tanks. ► The bioflocs had appropriate nutritional value and extracellular enzyme activity. ► The bioflocs improved growth performance and feed utilization of cultured shrimp. ► The bioflocs had a positive effect in digestive enzyme activity of cultured shrimp. ► The bioflocs could influence the whole body composition of cultured shrimp.

A microsatellite panel for mating system analysis and broodstock management of captive long-snouted seahorse Hippocampus guttulatus Almudena López, Belén G. Pardo, Miquel Planas, Patricia Quintas, Paulino Martínez, Carmen Bouza Show preview | PDF (183 K) | Related articles | Related reference work articles Highlights ► We test six microsatellites to assign parentage of captive long-snouted seahorses. ► Loci show high exclusion power, low typing error and fit Mendelian segregation. ► Genetic parentage shows monogamous mating system of captive long-snouted seahorse. ► Useful microsatellite tool to support captive breeding of long-snouted seahorse.

Interbreeding of genetically distinct native brown trout (Salmo trutta) populations designates offspring fitness Jens Wollebæk, Knut H. Røed, Åge Brabrand, Jan Heggenes Show preview | PDF (912 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Supportive breeding changes gene frequencies. ► Admixture in breeding selects for specific life histories. ► Fitness of stocked brown trout relates to genetic origin. ► Hybrids express environmental specific low fitness.

Cytokine responses in the common carp, Cyprinus carpio L. treated with baker's yeast extract G. Biswas, H. Korenaga, H. Takayama, T. Kono, H. Shimokawa, M. Sakai Show preview | PDF (559 K) | Related articles | Related reference work articles Highlights ► Baker's yeast extract contained nucleotides and β-glucan as major components. ► Yeast extract-treated fish had up-regulation of cytokine genes expression. ► Treated fish showed increased phagocytosis, NBT reduction and pathogen resistance. ► Baker's yeast extract had immunostimulatory effects on common carp immune system. ► It may be used as a potential immunostimulant in carp aquaculture.

Proximate and fatty acid compositions in muscle, liver and gonads of wild versus cultured broodstock of Senegalese sole (Solea senegalensis)

Aquaculture Journals Page: 120 of 331

Aquaculture Journals – Table of Contents

Fernando Norambuena, Alicia Estevez, Gordon Bell, Ignacio Carazo, Neil Duncan Show preview | PDF (1021 K) | Related articles | Related reference work articles Highlights ► Lipids and fatty acids in tissues of wild and cultured broodstock were compared. ► Cultured broodstock had lower levels of ARA, cholesterol and polar lipid. ► Cultured broodstock had higher levels of total lipid, nuetral lipid and linlenoic acid 18:2n-6. ► Cultured broodstock had higher ratios of EPA/ARA and DHA/ARA. ► The significance of low ARA and high EPA/ARA ratios on reproductive physiology was discussed.

A validated quantitative polymerase chain reaction assay for the detection of ranaviruses (Family Iridoviridae) in fish tissue and cell cultures, using EHNV as a model Diana Jaramillo, Alison Tweedie, Joy A. Becker, Alex Hyatt, Sandra Crameri, Richard J. Whittington Show preview | PDF (397 K) | Related articles | Related reference work articles Highlights ► We assessed the fitness of a qPCR assay for ranaviruses detection. ► Sensitivity and specificity were tested using tissue homogenates and tcsn. ► Virus isolation was used as the gold standard for validation purposes. ► Analytical sensitivity of qPCR was higher than PCR and virus isolation. ► The assay was found a suitable tool for diagnostics and surveillance.

Growth of growth hormone transgenic coho salmon Oncorhynchus kisutch is influenced by construct promoter type and family line Rosalind A. Leggatt, Carlo A. Biagi, Jack L. Smith, Robert H. Devlin Show preview | PDF (712 K) | Related articles | Related reference work articles Highlights ► Growth hormone (GH) transgenesis causes accelerated growth in fish. ► Use of different constructs to increase growth has not been directly compared. ► Metallothionein was a better promoter than histone at promoting growth. ► Growth was greatly affected by strain and triploidy, as well as construct type. ► Growth correlated to plasma IGF-I levels, but not GH levels, in transgenic strains.

Molecular characterization and expression profiles of three GnRH forms in the brain and pituitary of adult chub mackerel (Scomber japonicus) maintained in captivity Sethu Selvaraj, Hajime Kitano, Masafumi Amano, Mitsuo Nyuji, Kensuke Kaneko, Akihiko Yamaguchi, Michiya Matsuyama Show preview | PDF (1643 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We cloned cDNAs encoding three GnRH forms in the chub mackerel. ► Quantified concentrations of GnRH mRNAs and peptides in the brain and pituitary. ► Seabream GnRH form found to play a dominant role in seasonal gonadal development.

Replacement of fish oil by poultry oil and canola oil in yellowtail kingfish (Seriola lalandi) at optimal and suboptimal temperatures J.N. Bowyer, J.G. Qin, R.P. Smullen, D.A.J. Stone Show preview | PDF (3019 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 121 of 331

Aquaculture Journals – Table of Contents

► Fish oil is a limited resource and alternative lipid sources in feeds is necessary. ► Replacement with 100% poultry oil and 50% canola oil had no growth effect. ► 100% canola oil is detrimental to fish growth and health. ► 100% canola oil diet increased the occurrence of green liver at low temperatures. ► Providing new information towards more sustainable, cost-effective finfish diets.

Dietary protein source significantly alters growth performance, plasma variables and hepatic gene expression in rainbow trout (Oncorhynchus mykiss) fed amino acid balanced diets Jurij Wacyk, Madison Powell, Kenneth Rodnick, Ken Overturf, Rodney A. Hill, Ronald Hardy Show preview | PDF (667 K) | Related articles | Related reference work articles Highlights ► We study the effect of the inclusion of two protein sources in rainbow trout diets. ► Diets were balanced for macro nutrient and amino acid profiles and supplemented with branched chain amino acids. ► Growth performance was negatively affected by dietary treatments. ► Essential amino acids in plasma of fish fed plant proteins was significantly higher. ► The expression of genes associated with protein metabolism was significantly altered.

A population genetic analysis of abalone domestication events in South Africa: Implications for the management of the abalone resource Clint Rhode, Juli-ann Hepple, Suzaan Jansen, Tanja Davis, Jessica Vervalle, Aletta Elizabeth Bester-van der Merwe, Rouvay Roodt-Wilding Show preview | PDF (722 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Independent domestication events for South African abalone. ► Genetic drift and selection may facilitate genetic differentiation. ► Objectives for abalone management, genetic enhancement and conservation.

Ontogenic changes in the osmoregulatory capacity of the Nile tilapia Oreochromis niloticus and implications for aquaculture S. Fridman, J.E. Bron, K.J. Rana Show preview | PDF (758 K) | Related articles | Related reference work articles Highlights ► Effects of salinity in the Nile tilapia were studied during early life stages. ► Eggs and larvae withstood elevated rearing salinities < 20 ppt. ► Transfer age had a significant positive effect on larval ability to osmoregulate. ► Salinity showed a significant effect on the incidence of gross larval malformation. cDNA cloning and expression profile analysis of an ATP-binding cassette transporter in the hepatopancreas and intestine of shrimp Fenneropenaeus chinensis Zhi-Qiang Chang, Jian Li, Ping Liu, Mario Meng-Chiang Kuo, Yu-Ying He, Ping Chen, Ji-Tao Li Show preview | PDF (1265 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The first full-length cDNA sequence of ABC transporter in shrimp F. chinensis. ► The FcABCG protein contains 633 amino acid residues with a MW of 70.57 kDa. ► Alkaline pH stress or norfloxacin diet activates FcABCG expression in F. chinensis.

Aquaculture Journals Page: 122 of 331

Aquaculture Journals – Table of Contents

Fillet colour correlates with biochemical status in Australasian snapper (Pagrus auratus) during storage in refrigerated seawater Nicholas P.L. Tuckey, Leonard G. Forgan, Alistair R. Jerrett Show preview | PDF (1083 K) | Related articles | Related reference work articles Highlights ► Storage of snapper in RSW at 4.15 °C extended time to firm-rigor until after 24 h. ► From 72 h storage at 0.3 °C reduced inosine and hypoxanthine concentrations. ► Fillet CIEL*a*b colours correlated with post-harvest fillet biochemistry. ► Laser penetration can be used to monitor opacity in fish fillets.. ► As harvested skin colour was not preserved by RSW storage at either temperature.

Cathepsin L proteases of the parasitic , Lepeophtheirus salmonis Elaine McCarthy, Eleanor Cunningham, Lorraine Copley, David Jackson, David Johnston, John P. Dalton, Grace Mulcahy Show preview | PDF (937 K) | Related articles | Related reference work articles Highlights ► Molecular characterisation of two L. salmonis cathepsin L-like gene sequences. ► Identification of four potential cathepsin L homologues in the sea lice species. ► Biochemical characterisation of L. salmonis cathepsin L activity. ► Identification of L. salmonis cathepsin L activity in different parasite life stages.

Spermatozoa motility, cryoresistance, and fertilizing ability in sterlet Acipenser ruthenus during sequential stripping Borys Dzyuba, Sergii Boryshpolets, Anna Shaliutina, Marek Rodina, Gunes Yamaner, David Gela, Viktoriya Dzyuba, Otomar Linhart Show preview | PDF (619 K) | Related articles | Related reference work articles

Advances in pre-operative techniques for pearl production in the lions-paw scallop Nodipecten subnodosus: Relaxation and mantle excision José A. Torres-Martínez, Pedro E. Saucedo, Carlos Rangel-Dávalos, Héctor Acosta-Salmón Show preview | PDF (576 K) | Related articles | Related reference work articles Highlights ► Scallops can be relaxed in 20–40 min using magnesium chloride or 2-phenoxyethanol. ► Scallops are able to survive excision of a section of mantle tissue. ► Scallops showed very high survival rates. ► This tool will improve the potential for successful production of cultured pearls.

Exploring the possibility of quantifying the effects of plant protein ingredients in fish feeds using meta-analysis and nutritional model simulation-based approaches Katheline Hua, Dominique P. Bureau Show preview | PDF (857 K) | Related articles | Related reference work articles Highlights ► We studied approaches to analyzing the effect of plant ingredients in fish feeds. ► Meta- analysis and nutritional model simulation were investigated. ► Meta-analysis was only meaningful when dietary compositions are comparable. ► Simulations using a nutritional model allowed a proper quantification.

Aquaculture Journals Page: 123 of 331

Aquaculture Journals – Table of Contents

Evaluation of boiled taro leaves, Colocasia esculenta (L.) Schott, as a freshwater shrimp, Caridina nilotica Roux protein replacement, in diets of Nile tilapia, Oreochromis niloticus (Linnaeus) Wilson M. Mathia, R. Fotedar Show preview | PDF (619 K) | Related articles | Related reference work articles Highlights ► No significant difference when taro leaves completely replaced shrimp meal in diets. ► Diets containing taro leaf meal were most cost effective with highest cost index. ► At 23% protein level, taro leaves can replace shrimp protein in Nile tilapia diets. ► Poor farmers can use taro leaves from their farms as a cheap protein source.

The effects of dietary n−3 series fatty acid on the fatty acid composition, cholesterol and fat-soluble vitamins of pleopodal eggs and stage 1 juveniles in a freshwater crayfish, Astacus leptodactylus (Eschscholtz) Muzaffer Mustafa Harlioğlu, Kenan Köprücü, Ayşe Gül Harlioğlu, Ökkeş Yilmaz, Sevinç Aydin, Serpil Mişe Yonar, Tuba Çakmak Duran, Sinan Özcan Show preview | PDF (240 K) | Related articles | Related reference work articles Highlights ► We examine effects of n-3 series fatty acids on egg and juvenile quality in crayfish. ► N-3 series fatty acids will improve chemical quality of crayfish egg and juvenile. ► N-3 series fatty acids will not affect cholesterol and vitamin levels in eggs.

Chlorophyll, lipid profiles and bioturbation in sediments around a fish cage farm in the Gulf of Eilat, Israel Kenneth D. Black, Lois A. Calder, Thomas D. Nickell, Martin D.J. Sayer, Heather Orr, Tim Brand, Elizabeth J. Cook, Shona H. Magill, Timor Katz, Noa Eden, Kenneth J. Jones, Manolis Tsapakis, Dror Angel Show preview | PDF (907 K) | Related articles | Related reference work articles Highlights ► Sediment enrichment studied at a fish farm near Eilat using a range of indicators. ► Benthic response different to that found around some temperate fish farms. ► Typical small opportunist polychaetes not found in high abundance under the cages. ► FAME analyses show faecal signal near the farm but primary production signal at 80. m. ► Chlorophyll a profiles indicated low levels of bioturbation..

Incorporation of fish feed and growth of blue mussels (Mytilus edulis) in close proximity to salmon (Salmo salar) aquaculture: Implications for integrated multi-trophic aquaculture in Norwegian coastal waters Aleksander Handå, Hojune Min, Xinxin Wang, Ole Jacob Broch, Kjell Inge Reitan, Helge Reinertsen, Yngvar Olsen Show preview | PDF (1317 K) | Related articles | Related reference work articles Highlights ► A one-year study of integrated salmon-mussel production in Norway. ► Incorporation of salmon fish feed identified by an increased content of 18:1n-9. ► More pronounced incorporation of 18:1n-9 in February compared to June and August. ► Higher dry weight of mussels at the fish farm in autumn and winter. ► Equal length growth for the fastest growing mussels at the farm and control mussels.

Aquaculture Journals Page: 124 of 331

Aquaculture Journals – Table of Contents

Optimal stocking density of juvenile Atlantic cod (Gadus morhua L.) reared in a land-based farm Björn Björnsson, Agnar Steinarsson, Matthías Oddgeirsson, Sólveig R. Ólafsdóttir Show preview | PDF (1384 K) | Related articles | Related reference work articles Highlights ► A lab study of stocking density, growth rate, survival and FCR of juvenile cod. ► A model to estimate profit and optimal stocking density in a land-based farm. ► For base-line assumptions about production costs the optimal density is 95 kg/m3.

Biofloc technology in aquaculture: Beneficial effects and future challenges Roselien Crab, Tom Defoirdt, Peter Bossier, Willy Verstraete Show preview | PDF (337 K) | Related articles | Related reference work articles Highlights ► Biofloc technology aims at enhancing water quality through balancing C and N. ► Heterotrophic bacteria assimilate inorganic N waste into biomass. ► The bioflocs can be used as proteinaceous feed for the cultured animals. ► We discuss advantages of biofloc technology and challenges for further research.

Nutritional evaluation of rapeseed protein isolate as fish meal substitute for juvenile turbot (Psetta maxima L.) — Impact on growth performance, body composition, nutrient digestibility and blood physiology Florian Nagel, Arndt von Danwitz, Karsten Tusche, Saskia Kroeckel, Chris G.J. van Bussel, Michael Schlachter, Halime Adem, Ralf-Peter Tressel, Carsten Schulz Show preview | PDF (1004 K) | Related articles | Related reference work articles Highlights ► Rapeseed protein isolate (RPI) as alternative ingredient in diets for turbot. ► 66% of dietary fish meal was replaced by RPI without effects on health status. ► 33% of dietary fish meal was replaced by RPI without reduced growth performance.

Response of common carp (Cyprinus carpio L.) to supplemental DL-methionine and different feeding strategies L.C. Nwanna, A. Lemme, Abdallah Metwally, F.J. Schwarz Show preview | PDF (216 K) | Related articles | Related reference work articles Highlights ► Crystalline DL-Met affects growth, feed intake and feed conversion of carp. ► Digestibility, carcass composition and AA content of blood were influenced. ► The effect of crystalline DL-Met was mainly independent of feeding strategy. ► Feeding was 2 × hand feeding, pair feeding and a fixed rate continuously. ► Feeding strategy affects performance parameters of carp.

Classification of circulating hemocytes from the red swamp crayfish Procambarus clarkii and their susceptibility to the novel pathogen Spiroplasma eriocheiris in vitro Zhengfeng Ding, Jie Du, Jiangtao Ou, Wenjie Li, Ting Wu, Yunji Xiu, Qingguo Meng, Qian Ren, Wei Gu, Hui Xue, Jianqing Tang, Wen Wang Show preview | PDF (2068 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 125 of 331

Aquaculture Journals – Table of Contents

► Hemocytes of Procambarus clarkii were classified. ► Primary hemocyte culture of P. clarkii was established. ► Hemocytes were separated into three distinct fractions and cultured separately. ► Immune related genes were induced by challenge with S. eriocheiris. ► It can serve as an in vitro model to assess the crustacean pathogen spiroplasma.

Longitudinal genetic analyses of fillet traits in Nile tilapia Oreochromis niloticus Eduardo Maldonado Turra, Denise Aparecida Andrade de Oliveira, Bruno Dourado Valente, Edgar de Alencar Teixeira, Samuel de Assis Prado, Érika Ramos de Alvarenga, Daniela Chemim de Melo, Vivian Paula Silva Felipe, Arthur Francisco Araújo Fernandes, Martinho de Almeida e Silva Show preview | PDF (1601 K) | Related articles | Related reference work articles Highlights ► There is little information on genetic parameters of meat yield traits in tilapia. ► Longitudinal genetic studies of these traits were performed by RRM. ► Fillet and carcass yield heritability estimates ranged from moderate to high. ► The way the fillets were removed seems to have high importance in the results. ► It is possible to obtain genetic changes in selection programs for these traits.

Dietary protein requirement of sharpsnout sea bream (, Cetti 1777) juveniles F. Coutinho, H. Peres, I. Guerreiro, P. Pousão-Ferreira, A. Oliva-Teles Show preview | PDF (521 K) | Related articles | Related reference work articles Highlights ► Protein requirement estimated to be 43% (protein intake of 7.68 g kg ABW− 1 day− 1). ► Protein requirement for maintenance estimated to be 0.71 g kg ABW− 1 day− 1. ► Increasing of dietary lipid level improved protein utilization efficiency.

Effects of density on variation in individual growth and differentiation in endocrine response of Japanese (Apostichopus japonicus Selenka) Surui Pei, Shuanglin Dong, Fang Wang, Xiangli Tian, Qinfeng Gao Show preview | PDF (1452 K) | Related articles | Related reference work articles Graphical abstract

Growth hormone transgene effects on growth performance are inconsistent among offspring derived from different homozygous transgenic common carp (Cyprinus carpio L.) Chengrong Zhong, Yanlong Song, Yaping Wang, Yongming Li, Lanjie Liao, Shouqi Xie, Zuoyan Zhu, Wei Hu

Aquaculture Journals Page: 126 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (446 K) | Related articles | Related reference work articles Highlights ► Homozygous GH-transgenic common carp were generated. ► The offspring of one growth‐enhanced homozygous carp, grew less well than controls. ► Classical selection and marker-assisted methods are required in transgenic breeding.

Evaluation of aggregation abilities between commensal fish bacteria and pathogens Łukasz Grześkowiak, Maria Carmen Collado, Seppo Salminen Show preview | PDF (179 K) | Related articles | Related reference work articles Highlights ► Commensal fish bacteria, L. citreum and E. durans show aggregative properties. ► Auto- aggregative ability of L. citreum depends on its viability. ► L. citreum and E. durans co- aggregate with different bacterial fish pathogens. ► Such co-aggregation is viability- and pathogen-dependent.

Characterization of the unusual non-thiosulfate-reducing Edwardsiella tarda isolated from eel (Anguilla japonica) farms C.-I. Park, S.-Y. Choi, W.-S. Kim, M.-J. Oh, E.-H. Kim, H.-Y. Kim, H.-D. Jeong, H.-J. Han, D.- H. Kim Show preview | PDF (471 K) | Related articles | Related reference work articles Highlights ► Unusual Edwardsiella tarda was isolated from diseased Japanese eels. ► Of the 17 E. tarda isolates, 11 were unable to reduce thiosulfate to H2S. ► All isolates produced H2S from sulfite. ► Non-thiosulfate-reducing E. tarda were isolated from 4 of the eight sampled eel farms. ► Careful attention should be made when identifying this unusual bacteria.

Corrigendum to “Induction of settlement in larvae of the mussel Mytilus galloprovincialis using neuroactive compounds” [Aquaculture 344–349 (2012) 210–215 FREE (2012) 210–215 ] Clara Sánchez-Lazo, Inés Martínez-Pita Show preview | PDF (98 K) | Related articles | Related reference work articles Previous – Top – Next

VOLUME 358-359, ISSUE , MAY 2012 Website

Research articles

Review

Molting, reproductive biology, and hatchery management of redclaw crayfish Cherax quadricarinatus (von Martens 1868) Joly Ghanawi, I. Patrick Saoud Show preview | PDF (386 K) | Related articles | Related reference work articles

The characteristics and status of pond aquaculture in Bangladesh Ben Belton, Arif Azad Aquaculture Journals Page: 127 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (529 K) | Related articles | Related reference work articles Highlights ► Recent changes in Bangladesh's aquaculture sector have been under-reported. ► 4.27 million households (20% of rural inhabitants) operate a homestead pond. ► Extensive, semi-intensive and intensive culture each account for ≈ 30% of production. ► Per capita fish consumption has increased rapidly, particularly in urban areas.

Diseases

Synthesis and characterization of CS/TPP nanoparticles for oral delivery of gene in fish S. Vimal, G. Taju, K.S.N. Nambi, S. Abdul Majeed, V. Sarath Babu, M. Ravi, A.S. Sahul Hameed Show preview | PDF (990 K) | Related articles | Related reference work articles Highlights ► CS/TPP nanoparticle ► Non viral gene delivery ► Encapsulate pVAOMP DNA ► In vitro and in vivo study

Necrotizing myositis associated with parasitism by Myxobolus sp. () in the palate of the violet goby, broussonnetii (), from Marajó Island, Brazil Michele Velasco, Patrícia Matos, Osimar Sanches, Sergio Carmona São Clemente, Marcela Videira, Patrícia Santos, Edilson Matos Show preview | PDF (690 K) | Related articles | Related reference work articles Highlights ► The necropsy revealed the presence of milky rounded cysts throughout the palate. ► The necrosis was widespread in the parasitized muscles by Myxobolus sp. ► The area of the necrosis was infiltrated by monocytes, neutrophils, and lymphocytes.

Identification of a 37.6 kDa membrane protein from flounder gill cells involved in binding and infection to lymphocystis disease virus Xiaoqian Tang, Jing Diao, Wenbin Zhan, Xiuzhen Sheng Show preview | PDF (853 K) | Related articles | Related reference work articles Highlights ► The interaction between LCDV and a 37.6 kDa FG cell membrane protein was identified. ► The characteristic of the 37.6 kDa protein was analyzed by 2D electrophoresis and MS. ► Anti-37.6 kDa protein antibody could block binding and infection of LCDV to FG cell.

The efficacy of selected plant extracts and bioflavonoids in controlling infections of Saprolegnia australis (Saprolegniales; Oomycetes) S. Caruana, G.H. Yoon, M.A. Freeman, J.A. Mackie, A.P. Shinn Show preview | PDF (581 K) | Related articles | Related reference work articles Highlights ► Efficacy of 27 plant extracts in controlling pathogen Saprolegnia is assessed. ► Extracts were assessed by in vitro diffusion against currently used control agents. ► 12 extracts inhibiting growth at < 100 ppm, assessed further in Saprolegnia cultures ► All 12 reduce growth, four extracts were as effective as 10 ppm malachite green. ► Results demonstrate repeated doses of certain extracts impact on growth

Aquaculture Journals Page: 128 of 331

Aquaculture Journals – Table of Contents

Development of a quantitative polymerase chain reaction (qPCR) assay for the detection of dwarf gourami iridovirus (DGIV) and other megalocytiviruses and comparison with the Office International des Epizooties (OIE) reference PCR protocol Anneke E. Rimmer, Joy A. Becker, Alison Tweedie, Richard J. Whittington Show preview | PDF (658 K) | Related articles | Related reference work articles Highlights ► A qPCR assay for the detection of dwarf gourami iridovirus (DGIV) was developed. ► The limit of detection for the qPCR assay was 100 copies. ► DNA extraction method had no effect on the sensitivity of DGIV detection. ► The qPCR has approximately 3–4 logs greater sensitivity than the OIE PCR protocol. ► A plasmid was developed for inter- laboratory standardisation of the assay.

Echinacea purpurea and Uncaria tomentosa reduce the prevalence of WSSV in witheleg shrimp (Litopenaeus vannamei) cultured under laboratory conditions Violeta Medina-Beltrán, Antonio Luna-González, Jesús A. Fierro-Coronado, Ángel I. Campa- Córdova, Viridiana Peraza-Gómez, Ma. del Carmen Flores-Miranda, Jesús N. Gutiérrez Rivera Show preview | PDF (328 K) | Related articles | Related reference work articles Highlights ► This study evaluated the effect of medicinal plants in Litopenaeus vannamei. ► Echinacea purpurea and Uncaria tomentosa reduces prevalence of WSSV in infected shrimp. ► Echinacea purpurea and Uncaria tomentosa are good candidates to be used as feed additives in shrimp culture.

Co-infection of megalocytivirus and viral nervous necrosis virus in a very severe mass mortality of juvenile orange-spotted groupers (Epinephelus coioides) Hongling Ma, Junfeng Xie, Shaoping Weng, Tianhong Zhou, Jianguo He Show preview | PDF (1055 K) | Supplementary content | Related articles | Related reference work articles Highlights ► A very severe mass mortality of juvenile groupers causing about 270,000 fish death was reported. ► Both megalocytivirus and VNNV were detected from this case of mass mortality of juvenile groupers. ► A new megalocytivirus (OSGIV-HN11) was isolated and partial characterized in MFF-1 cells.

Genetics

Genetic mapping of quantitative trait loci (QTL) for body-weight in Atlantic salmon (Salmo salar) using a 6.5 K SNP array Alejandro P. Gutierrez, Krzysztof P. Lubieniecki, Evelyn A. Davidson, Sigbjørn Lien, Matthew P. Kent, Steve Fukui, Ruth E. Withler, Bruce Swift, William S. Davidson Show preview | PDF (540 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We used a 6500 SNP array to genotype 5 Atlantic salmon families. ► We used the genotype information to identify QTL for body weight. ► Genome wide significant QTL occur on Ssa02, Ssa07, Ssa13, Ssa09, Ssa17 and Ssa26. ► These QTL will be valuable for use in a marker assisted selection breeding program. ► This is an important step towards identifying genes for growth in Atlantic salmon.

Aquaculture Journals Page: 129 of 331

Aquaculture Journals – Table of Contents

Genetic diversity and structure within and between wild and cultivated Saccharina japonica (Laminariales, Phaeophyta) revealed by SSR markers Fuli Liu, Jianting Yao, Xiuliang Wang, Anna Repnikova, Dmitry A. Galanin, Delin Duan Show preview | PDF (405 K) | Related articles | Related reference work articles Highlights ► Genetic diversity and structure of S. japonica populations were characterized. ► The genetic diversity of wild populations was higher than that of cultivars. ► The S. japonica populations have significant genetic structure differentiation. ► Selection, cultivation and dispersal model affected the population structure.

Genetic linkage mapping and genetic analysis of QTL related to eye cross and eye diameter in common carp (Cyprinus carpio L.) using microsatellites and SNPs Shubo Jin, Xiaofeng Zhang, Zhiying Jia, Hongtuo Fu, Xianhu Zheng, Xiaowen Sun Show preview | PDF (981 K) | Related articles | Related reference work articles Highlights ► Many SNP markers were used to construct the genetic linkage maps. ► SNP markers were able to provide more genetic information. ► Genomic regions for eye cross and eye diameter were accurately located. ► This essay provides information for further research on eye cross and eye diameter. ► The correlation analysis would assist and improve the future of breeding work.

Nutrition

Dietary selection by gilthead sea bream (Sparus aurata) provided with unbalanced mixed-macronutrient feeds dispensed from self-feeders A. Montoya, S. Zamora, F.J. Sánchez-Vázquez Show preview | PDF (587 K) | Related articles | Related reference work articles Highlights ► We studied sea bream's macronutrient selection and its response to protein fasting. ► The composition of sea bream's self-selected diet was 63.7% P, 15.5% F and 20.6% C. ► Sea bream maintained the energy intake during the protein deprivation period.

Biochemical and energy dynamics during larval development of the mussel Mytilus galloprovincialis (Lamarck, 1819) Clara Sánchez-Lazo, Inés Martínez-Pita Show preview | PDF (539 K) | Related articles | Related reference work articles Highlights ► We analyzed the biochemical composition of mussel early developmental stages. ► Embryogenesis was supported by triglyceride and ester reserves stored in eggs. ► Docosahexaenoic acid played a structural role during embryonic development. ► Non methylene interrupted dienoic fatty acids were present throughout development. ► Lipid fraction increased in postlarvae with respect to pediveliger larvae.

Oxidative status and gut morphology of white sea bream, Diplodus sargus fed soluble non-starch polysaccharide supplemented diets P. Enes, A. Pérez-Jiménez, H. Peres, A. Couto, P. Pousão-Ferreira, A. Oliva-Teles

Aquaculture Journals Page: 130 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (425 K) | Related articles | Related reference work articles Highlights ► Guar gum effect on white sea bream oxidative status and distal intestine morphology. ► Key enzymes with antioxidant activity were lower in fish fed with 4% of guar gum. ► Higher activities were recorded in fish fed with 12% of guar gum. ► Diet-induced reactive oxygen species generation depends on guar gum inclusion levels. ► Guar gum up to 4% may have a gut oxidation stress prevention effect.

Energy requirement for maintenance and efficiency of energy utilization for growth in juvenile turbot (Psetta maxima, L.): The effect of strain and replacement of dietary fish meal by C. Dietz, S. Kroeckel, C. Schulz, A. Susenbeth Show preview | PDF (353 K) | Related articles | Related reference work articles Highlights ► Turbot strain affects maintenance energy requirement and energy utilization. ► Exchange of fish meal by wheat gluten increases maintenance energy requirement. ► Exchange of fish meal by wheat gluten increases energy utilization efficiency. ► Observed differences did not affect energy retention at a high feeding level. ► No growth reduction by wheat gluten up to a proportion of 33% in turbot diets

Dietary lysine requirement of juvenile Pacific white shrimp, Litopenaeus vannamei Fengjun Xie, Wenping Zeng, Qicun Zhou, Hualang Wang, Tuo Wang, Changqu Zheng, Yongli Wang Show preview | PDF (264 K) | Related articles | Related reference work articles Highlights ► Supplemented dietary lysine levels has positive effects on SGR, FER, PER and PDR. ► Litopenaeus vannamei is able to efficiently utilize crystalline L-lysine. ► The optimal dietary lysine requirement is 2.05% dry diet (4.93% dietary protein).

Effects of dietary taurine supplementation to a casein-based diet on growth performance and taurine distribution in two sizes of juvenile turbot (Scophthalmus maximus L.) Guoshan Qi, Qinghui Ai, Kangsen Mai, Wei Xu, Zhiguo Liufu, Biao Yun, Huihui Zhou Show preview | PDF (675 K) | Related articles | Related reference work articles Highlights ► Dietary 1.0% taurine was optimal for growth of turbot with 6.3 g initial weight. ► Dietary 0.5% taurine was optimal for growth of turbot with 165.9 g initial weight. ► Dietary high taurine inclusion had inhibitory effects on turbot. ► Consumed taurine was well correlated with taurine in body and tissues.

Plant proteins and oil do not have detrimental effects on post- mortem muscle instrumental texture, sensory properties and nutritional value of gilthead seabream Elisabete Matos, Amparo Gonçalves, Narcisa Bandarra, Rita Colen, Maria Leonor Nunes, Luisa M.P. Valente, Maria Teresa Dinis, Jorge Dias Show preview | PDF (306 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 131 of 331

Aquaculture Journals – Table of Contents

► Nutritional value of seabream is not affected by high inclusion of plant sources. ► FA profile of the muscle was slightly affected by the feeding with vegetable oils. ► Seabream fed vegetable-based diets were well accepted by sensory panel. Physiology and Endocrinology

Growth, metabolism and immune responses to and the regeneration of viscera in sea cucumber, Apostichopus japonicus Yuanqi Zang, Xiangli Tian, Shuanglin Dong, Yunwei Dong Show preview | PDF (994 K) | Related articles | Related reference work articles Highlights ► Evisceration influenced growth, metabolism and immune responses in sea cucumber. ► Immune responses in sea cucumber were tissue-specific during regeneration. ► Sea cucumber recovered physiologically within 45 days after evisceration.

Spirolide uptake and detoxification by Crassostrea gigas exposed to the toxic Alexandrium ostenfeldii Walid Medhioub, Patrick Lassus, Philippe Truquet, Michèle Bardouil, Zouher Amzil, Véronique Sechet, Manoella Sibat, Philippe Soudant Show preview | PDF (847 K) | Related articles | Related reference work articles Highlights ► Oysters exposed to Alexandrium ostenfeldii cultures accumulate mainly 13.19- didesMeC-SPX. ► Oyster DG and remaining tissues contained respectively 83% and 17% of total SPX after 4 days contamination. ► Exposure to A. ostenfeldii led to haemocytes infiltration and diapedesis (inflammatory effects). ► Percentage of active digestive tubules was lower in exposed oysters. ► When nontoxic diet was applied to SPX-contaminated oysters detoxification was almost complete within 7 days.

Optimum temperature of rearing water during artificial induction of ovulation in Japanese eel Tatsuya Unuma, Sayumi Sawaguchi, Natsuki Hasegawa, Noriko Tsuda, Toshiomi Tanaka, Kazuharu Nomura, Hideki Tanaka Show preview | PDF (667 K) | Related articles | Related reference work articles Highlights ► Egg quality at ovulation is superior at 20 °C and 22.5 °C than at 17.5 °C and 25 °C. ► Over-ripening after ovulation progresses slower at 20 °C than at 22.5 °C. ► The optimum temperature during ovulation induction of the Japanese eel is 20 °C. Physiology and Endocrinology: Fish

Induction of sexual maturation of the female honeycomb grouper, Epinephelus merra, in the non-breeding season by modulating environmental factors with GnRH analogue implantation Tatsuya Kanemaru, Masaru Nakamura, Ryosuke Murata, Katsuya Kuroki, Hikari Horie, Katsuhisa Uchida, Balasubramanian Senthilkumaran, Hirohiko Kagawa Show preview | PDF (728 K) | Related articles | Related reference work articles Highlights ► Long photoperiod and high water temperature induce off-season spawning in grouper. ► Modulating environmental factors with GnRHa is best strategy for off-season spawning. ► Newly introduced osmotic pump for GnRHa delivery augments off-season spawning.

Aquaculture Journals Page: 132 of 331

Aquaculture Journals – Table of Contents

Application of sperm cryopreservation to hatchery practice and species conservation: A case of the Adriatic grayling (Thymallus thymallus) Ákos Horváth, Dušan Jesenšek, Balázs Csorbai, Zoltán Bokor, Éva Raboczki, Dániel Kaczkó, Gergely Bernáth, György Hoitsy, Béla Urbányi, Simona Sušnik Bajec, Aleš Snoj Show preview | PDF (174 K) | Related articles | Related reference work articles Highlights ► Sperm cryopreservation applied to salmonid aquaculture and conservation. ► Relatively short-term cryopreserved storage of sperm alternative to gene banking. ► Mitigation of the effects of introgressive hybridization in a salmonid population. Physiology and Endocrinology: Molluscs and

Molecular characteristics of HSC70 gene and its expression in the golden apple snails, Pomacea canaliculata (Mollusca: Gastropoda) Guowan Zheng, Shengzhang Dong, Yun Hou, Ke Yang, Xiaoping Yu Show preview | PDF (1689 K) | Related articles | Related reference work articles Highlights ► We cloned and characterized heat shock cognate 70 gene from Pomacea canaliculata. ► HSC70 exhibits constitutive tissue-specific expression pattern. ► Higher expression levels of HSC70 are found in the gill and foot muscle. ► HSC70 mRNA levels are increased remarkably in all the tissues under heat shock. ► HSC70 may play a role in mediating the physiological response to heat shock.

Ontogenetic changes of innate immune parameters from eggs to early postlarvae of white shrimp Litopenaeus vannamei (Crustacea:) Leonardo Martín, Néstor M. Castillo, Amilcar Arenal, George Rodríguez, Ramón Franco, Dayamí Santiesteban, Jorge Sotolongo, Alina Forrellat, Georgina Espinosa, Olimpia Carrillo, Hector Cabrera Show preview | PDF (806 K) | Related articles | Related reference work articles Highlights ► Phenoloxidase activity decreased during early ontogeny of L. vannamei. ► Peroxidase activity increase during the postlarval stages of L. vannamei. ► Superoxide anion production increase during early ontogeny of L. vannamei. ► Superoxide dismutase highest value was detected at Zoea-I, the first larvae stage. ► Major immune parameter fluctuations were detected during metamorphosis periods. Production Science

Diet composition and feeding periodicity of the seahorse Hippocampus barbouri reared in illuminated sea cages Luis Maria B. Garcia, Grace V. Hilomen-Garcia, Fritzie T. Celino, Tomas T. Gonzales, Ronald J. Maliao Show preview | PDF (319 K) | Related articles | Related reference work articles Highlights ► Caged adult Hippocampus barbouri fed more diverse prey than juveniles. ► and decapod larvae comprised the bulk of prey ingested by caged seahorses. ► Caged seahorses fed during the day and also at night when cages were illuminated.

A two-stage growth model for gilthead sea bream (Sparus aurata) based on the thermal growth coefficient P. Mayer, V.D. Estruch, M. Jover

Aquaculture Journals Page: 133 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (827 K) | Related articles | Related reference work articles Highlights ► Fish growth mathematical models can help improve fish farm management. ► A new approach to the growth of gilthead sea bream is developed. ► The classic TGC model was compared with a new model considering 2/3 as exponent. ► Two stages for the growth of gilthead were detected by means of seasonal TGC models. ► A transition value for weight around 117 g is obtained.

Cultivation of gilthead bream in monoculture and integrated multi-trophic aquaculture. Analysis of production and environmental effects by means of the FARM model J.G. Ferreira, C. Saurel, J.M. Ferreira Show preview | PDF (1296 K) | Related articles | Related reference work articles Highlights ► Gilthead bream and shellfish models were integrated in the FARM modelling framework. ► Clear benefits of IMTA can be seen both for ponds and offshore culture. ► In food-poor offshore areas, IMTA can significantly improve shellfish production. ► Gilthead bream cultivation at current speeds between 0.1 and 0.5 m s− 1 is optimal. ► Very low current speeds probably result in lower fillet quality compared to wild fish.

Feeding, metabolism and growth in response to temperature in juveniles of the Australasian sea cucumber, Australostichopus mollis Leonardo N. Zamora, Andrew G. Jeffs Show preview | PDF (327 K) | Related articles | Related reference work articles Highlights ► The response to different temperatures of juvenile sea cucumbers was evaluated. ► During experimentation the juveniles were fed mussel waste. ► Temperature affected metabolism, ingestion, food conversion efficiency and growth. ► The implications for out- growing juveniles of this species are discussed.

Rapid growth of farmed cod in sea cages in the Faroe Islands Arne G. Kolbeinshavn, Poul Vestergaard, Øystein Patursson, Hannes Gislason Show preview | PDF (576 K) | Related articles | Related reference work articles Highlights ► The sea temperature at the Faroe Islands is near-optimal for cod farming. ► Growth in the Faroe Islands is close to growth for optimal model temperatures. ► Sexual maturation of farmed cod was inhibited in two open sea cages with 24 h light. ► The total growth period was 28 months from egg to 4.06 and 4.16 kg, respectively. ► In the same period, the growth reached 2.95 kg in another sea cage without lights.

Influence of stocking densities in the nursery phase on the growth of Macrobrachium amazonicum reared in net pens Helcio Luis de Almeida Marques, Helenice Pereira Barros, Margarete Mallasen, Marcello Villar Boock, Patricia Maria Contente Moraes Valenti Show preview | PDF (555 K) | Related articles | Related reference work articles Highlights ► Biomass in the nursery phase was significantly higher for the highest density. ► Stocking density at the nursery phase did not affect the grow-out of prawns. ► Apparent

Aquaculture Journals Page: 134 of 331

Aquaculture Journals – Table of Contents

compensatory growth occurred after transferring prawns to lower densities. ► Population structure in pen culture was similar to that registered in earth ponds.

Sperm lipid peroxidation is correlated with differences in sperm quality during the reproductive season in precocious European sea bass (Dicentrarchus labrax) males S. Martínez-Páramo, P. Diogo, J. Beirão, M.T. Dinis, E. Cabrita Show preview | PDF (253 K) | Related articles | Related reference work articles Highlights ► Precocious sea bass sperm quality showed differences through the reproductive season. ► Lipid peroxidation explains poor sperm quality at the beginning of the season. ► Sperm collected in January showed the best quality for further reproductive purposes. ► Sperm collected in January showed the best characteristics to be cryopreserved.

Effect of dietary protein and carbohydrate levels on weight gain and gonad production in the sea urchin Lytechinus variegatus Laura E. Heflin, Victoria K. Gibbs, Mickie L. Powell, Robert Makowsky, John M. Lawrence, Addison L. Lawrence, Stephen A. Watts Show preview | PDF (688 K) | Related articles | Related reference work articles Highlights ► L. variegatus were fed eight diets with varying protein and carbohydrate levels. ► Protein level and protein: energy ratio were the best models of total weight gain. ► Carbohydrate level was a poor predictor for most growth parameters examined. ► Higher energy diets produced lower food conversion ratios. ► Variations in dietary nutrients and energy differentially affected organismal growth.

High temporal variability in bacterial community, silicatein and hsp70 expression during the annual life cycle of Hymeniacidon sinapium (Demospongiae) in China's Yellow Sea Heng Cao, Xupeng Cao, Xiaoyan Guan, Song Xue, Wei Zhang Show preview | PDF (2539 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Development of Hymeniacidon sinapium was inspected in the field monthly. ► Histological details, silicatein and hsp70 expression were monitored. ► Gametogenesis and embryogenesis were described, concerning energy balance. ► DGGE showed hints in bacterial community variability to sponge development. ► The findings will benefit the successful aquaculture of this sponge.

Biochemical composition, lipid classes, fatty acids and sexual hormones in the mussel Mytilus galloprovincialis from cultivated populations in south Spain Inés Martínez-Pita, Clara Sánchez-Lazo, Ignacio Ruíz-Jarabo, Marcelino Herrera, Juan Miguel Mancera Show preview | PDF (667 K) | Related articles | Related reference work articles Highlights ► We determine mobilization of metabolites and lipids during gametogenesis in mussels. ► Changes in sex steroid hormones during gonadal maturation in mussels are detected. ► Glucose stored as glycogen, is used in gametogenesis and transformed to lipid. ► Lipid is transferred from the digestive gland to the mantle and stored for embryo development. ► Lipid composition, including fatty acid profile, depends on the sex.

Aquaculture Journals Page: 135 of 331

Aquaculture Journals – Table of Contents

Cloning and transcription analysis of hsp70-1 and hsp70-2 of Gracilaria lemaneiformis under heat shock Yinghui Gu, Xuan Zhang, Ning Lu, Xiaonan Zang, Xuecheng Zhang, Guangqi Li Show preview | PDF (2161 K) | Related articles | Related reference work articles Highlights ► We first researched the role of HSP70 in heat resistance of G. lemaneiformis. ► We first cloned and analyzed hsp70-1 and hsp70-2 genes from G. lemaneiformis. ► We found that activity of hsp70 was directly related to the heat-tolerant ability of G. lemaneiformis.

Determination of optimum temperature and salinity for fertilization and hatching in the Chinese pearl oyster Pinctada martensii (Dunker) Hui Wang, Xiaowen Zhu, Yanan Wang, Mingming Luo, Zhigang Liu Show preview | PDF (497 K) | Related articles | Related reference work articles Highlights ► The joint influence of two factors on fertilization and hatching was examined. ► The relationship of fertilization and hatching to two factors was modeled. ► The optimal temperature-salinity combination was determined.

Previous – Top – Next

VOLUME 360-361, ISSUE , MAY 2012 Website

Research articles

Nutrition

Comparative study of lipid and fatty acid composition in different tissues of wild and cultured female broodstock of greater amberjack (Seriola dumerili) D. Rodríguez-Barreto, S. Jerez, J.R. Cejas, M.V. Martin, N.G. Acosta, A. Bolaños, A. Lorenzo Show preview | PDF (237 K) | Related articles | Related reference work articles

Culture performance and tissue fatty acid compositions of (Perca flavescens) fed different dietary lipids Kamal Mjoun, Kurt A. Rosentrater, Michael L. Brown Show preview | PDF (235 K) | Related articles | Related reference work articles Highlights ► Alternatives to fish oil can improve the sustainability of aquaculture. ► Five isonitrogenous, isolipidic, and isocaloric diets were used in a 15-week trial. ► Combinations of fish, flaxseed, and soybean oil were used for yellow perch. ► Flaxseed oil can effectively be used to replace fish oil in yellow perch diets.

Optimizing plant protein combinations in fish meal-free diets for rainbow trout (Oncorhynchus mykiss) by a mixture model Yuexing Zhang, Margareth Øverland, Karl D. Shearer, Mette Sørensen, Liv Torunn Mydland, Trond Storebakken Show preview | PDF (492 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 136 of 331

Aquaculture Journals – Table of Contents

► Similar growth in trout with 95% dietary plant protein as with LT fish meal only. ► Mixture modeling is useful to optimize diet composition. ► Combining dietary plant proteins is more efficient than single ingredient. ► Pea, Canola, and potato proteins combined gave best feed utilization. ► Soy protein concentrate was preferred for maximum protein digestibility.

Biosynthesis of essential fatty acids in Octopus vulgaris (Cuvier, 1797): Molecular cloning, functional characterisation and tissue distribution of a fatty acyl elongase Óscar Monroig, Diana Guinot, Francisco Hontoria, Douglas R. Tocher, Juan C. Navarro Show preview | PDF (941 K) | Related articles | Related reference work articles Highlights ► A fatty acid elongase was identified from Octopus vulgaris. ► The octopus elongase is phylogenetically related to vertebrate Elovl2 and Elovl5. ► The octopus elongase actively elongated C18 and C20, but not C22, PUFA substrates. ► n − 6 PUFAs appear to play particularly important biological roles in O. vulgaris. ► Several non-methylene interrupted fatty acids were identified in O. vulgaris.

Effects of fish meal- and fish oil-free diets on growth responses and fatty acid composition of juvenile coho salmon (Oncorhynchus kisutch) Ronald G. Twibell, Ann L. Gannam, Nathan M. Hyde, John S.A. Holmes, Jeff B. Poole Show preview | PDF (269 K) | Related articles | Related reference work articles Highlights ► Fish meal or fish oil replacement have similar growth effects in coho salmon. ► A diet free of both ingredients resulted in further growth reductions in coho salmon. ► Tissue fatty acid profiles were not identical to dietary fatty acid profiles.

High dietary EPA does not inhibit ∆5 and ∆6 desaturases in Atlantic salmon (Salmo salar L.) fed rapeseed oil diets Magny S. Thomassen, Dietrich Rein, Gerd M. Berge, Tone-Kari Østbye, Bente Ruyter Show preview | PDF (318 K) | Related articles | Related reference work articles Highlights ► We have studied the regulation of PUFA metabolism in farmed Atlantic salmon. ► We have studied effects of dietary oils on activity of desaturases and elongases. ► More than 100% apparent recovery of 22:5 n-3 suggests high C20 elongase activity. ► Results indicate inhibition of desaturases and elongases by DHA but not EPA. ► Only fish fed DHA showed inhibition of delta ∆5 and ∆6 desaturase gene expression.

Physiology and Endocrinology

Parental influence on embryo development in Penaeus monodon Stuart J. Arnold, Greg J. Coman Show preview | PDF (216 K) | Related articles | Related reference work articles Highlights ► Genotyping offspring to distinguish the parental influence on embryo development. ► No male influence on embryo development. ► Embryo development exclusively determined by the quality of the eggs. ► Important to measure both fertilization and hatch rates in commercial hatcheries.

Aquaculture Journals Page: 137 of 331

Aquaculture Journals – Table of Contents

Effects of phytoestrogens on sex reversal of Nile tilapia (Oreochromis niloticus) larvae fed diets treated with 17α-Methyltestosterone Abdel-Fattah M. El-Sayed, El-Sayeda H. Abdel-Aziz, Heba M. Abdel-Ghani Show preview | PDF (208 K) | Related articles | Related reference work articles Highlights ► We studied the effect of phytoestrogen in soybean on sex reversal of Nile tilapia. ► Fish fry were fed soybean meal-based diets treated with Methyltestosterone (MT). ► Phytoestrogens of soybean have estrogenic effects on Nile tilapia fry. ► Tilapia fry were also fed MT-based diets containing genistein and daidzein. ► The percent of males was reduced with increasing daidzein and genistein levels.

Physiology and Endocrinology: Fish

Ingestion rate, survival and growth of newly released seahorse Hippocampus reidi fed exclusively on cultured live food items Luciano Willadino, Lília P. Souza-Santos, Roberta C.S. Mélo, Ana Paula Brito, Nancilda C.S. Barros, Cristiane M.V. Araújo-Castro, Daniel B. Galvão, Adriana Gouveia, Cintia G. Regis, Ronaldo O. Cavalli Show preview | PDF (591 K) | Related articles | Related reference work articles Highlights ► The breeder origin affected the survival of seahorse juveniles. ► There is a complex trophic relationship between Tisbe copepod and seahorse juveniles. ► The ingestion rates of new-release juvenile on three live food were estimated.

Production Science

The effect of stocking density on the reproductive output of hatchery-reared Florida apple snails, Pomacea paludosa Helen Posch, Amber L. Garr, Rachael Pierce, Megan Davis Show preview | PDF (561 K) | Related articles | Related reference work articles Highlights ► We examined the effect of stocking density on reproductive output of Florida apple snails. ► Florida apple snails should be stocked at 50 snails/m2 to yield optimum egg production per female. ► A total of 44,679 juveniles were produced by 220 females in only eight weeks. ► There was no significant difference in the number of eggs per clutch or percent hatch rate across all density treatments.

The effect of photoperiod on larval culture performance of two marine finfish species Kevin R. Stuart, Mark Drawbridge Show preview | PDF (291 K) | Related articles | Related reference work articles Highlights ► Continuous light produced larger yellowtail and white seabass larvae. ► Survival for California yellowtail was higher under 24 hr light conditions. ► Swimbladder inflation was not changed with the change in photoperiod. ► 24 hr light is beneficial for these species through larval rearing.

Effect of mixed microalgal diets on growth and polyunsaturated fatty acid profile of European oyster (Ostrea edulis) juveniles

Aquaculture Journals Page: 138 of 331

Aquaculture Journals – Table of Contents

Jesse D. Ronquillo, Jamie Fraser, Audrie-Jo McConkey Show preview | PDF (471 K) | Related articles | Related reference work articles Highlights ► O. edulis growth rate improved by feeding algae rich in n − 3 fatty acid. ► Algal diet deficient in essential fatty acids stunted juvenile oyster growth. ► High algal total essential fatty acid is associated with fast growth rate.

Previous – Top – Next

VOLUME 362-363, ISSUE , MAY 2012 Website

Research articles

This issue is In Progress but contains articles that are final and fully citable. For recently accepted articles, see Articles in Press.

Diseases

The prebiotic inulin increases the phenoloxidase activity and reduces the prevalence of WSSV in whiteleg shrimp (Litopenaeus vannamei) cultured under laboratory conditions Antonio Luna-González, Judith C. Almaraz-Salas, Jesús A. Fierro-Coronado, Ma. del Carmen Flores-Miranda, Héctor A. González-Ocampo, Viridiana Peraza-Gómez Show preview | PDF (225 K) | Related articles | Related reference work articles Highlights ► This study evaluated the effect of prebiotics in Litopenaeus vannamei. ► Inulin increases phenoloxidase activity in shrimp and had a beneficial effect against WSSV. ► Inulin is a good candidate to be used as feed additive in shrimp culture.

Effect of different mangrove-to-pond area ratios on influent water quality and WSSV occurrence in Penaeus monodon semi-intensive farms using the greenwater culture technique Eleonor A. Tendencia, Roel H. Bosma, Jurgenne H. Primavera, Johan A.J. Verreth Show preview | PDF (412 K) | Related articles | Related reference work articles Highlights ► We investigated the effect of MPR on influent water quality and WSSV. ► Results showed that quality of influent water was not significantly better in farms with high MPR. ► Higher available sulfur was observed in MPR-4; higher percentage green vibrios in the soil in MPR-0. ► Results suggest that the presence of mangroves could prevent WSSV outbreak.

Genetics

Genetic parameters and response to selection for harvest body weight of the giant freshwater prawn Macrobrachium rosenbergii Sheng Luan, Guoliang Yang, Junyi Wang, Kun Luo, Yufei Zhang, Qiang Gao, Honglang Hu, Jie Kong Show preview | PDF (230 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 139 of 331

Aquaculture Journals – Table of Contents

► Heritability of body weight was sexually dimorphic, high in females and low in males. ► High genetic correlation implied that sex dimorphism cannot be reduced by selection. ► Heritability and genetic gain was lower than those reported in other farmed shrimp. ► Poor genetic variation of founder strains contributed to the low selection response. ► Higher genetic gain would be obtained by introducing wild or improved strains.

Nutrition

Biological performance of Totoaba macdonaldi in response to dietary protein level Christian Minjarez-Osorio, Mayra L. González-Félix, Martin Perez-Velazquez Show preview | PDF (186 K) | Related articles | Related reference work articles

The selection of an ideal diet for Ostrea edulis (L.) broodstock conditioning (part B) Ricardo González-Araya, Luc Lebrun, Claudie Quéré, René Robert Show preview | PDF (417 K) | Related articles | Related reference work articles Highlights ► We study the feeding assessment of four single microalgal species by flat oyster ► Best ingestion and absorption were observed with R. salina or T. weissflogii ► In gonad, the major polyunsaturated fatty acids (polar lipids) were EPA and DHA ► A transfer of sterols from food to oyster tissues occurred except with P. lutheri ► Gametogenesis was very active in oysters fed R. salina or T. weissflogii

Physiology and Endocrinology

Effects of diet and density on growth, survival and gametogenesis of Hediste diversicolor (O.F. Müller, 1776) (Nereididae, Polychaeta) N. Nesto, R. Simonini, D. Prevedelli, L. Da Ros Show preview | PDF (609 K) | Related articles | Related reference work articles Highlights ► H. diversicolor juveniles were reared at different diets and stocking densities. ► Commercial feeds and low stocking densities granted the best growth performances. ► High protein feeds determined an earlier gametogenesis and sexual maturity. ► Commercial-size organisms were obtained within 3.5-4 months from hatching.

Salinity tolerance, ontogeny of osmoregulation and zootechnical improvement in the larval rearing of the Caledonian Blue Shrimp, Litopenaeus stylirostris (Decapoda, ) Dominique Pham, Guy Charmantier, Nelly Wabete, Viviane Boulo, Francis Broutoi, Jean- René Mailliez, Jean-Marie Peignon, Mireille Charmantier-Daures Show preview | PDF (418 K) | Related articles | Related reference work articles Highlights ► Osmoregulation capacity in L. stylirostris is weak in the early life stage. ► Postlarvae progressively acquired the adult pattern of hyper-hypo-osmoregulation. ► At PL9, the estimated isosmotic salinity was 24.5 ppt (720 mOsm.kg− 1). ► A two-fold-growth in 19 days-old postlarvae was obtained in dilute seawater compared to seawater conditions.

Aquaculture Journals Page: 140 of 331

Aquaculture Journals – Table of Contents

Changes in the transcriptional expression of oxidative stress response genes in Akoya pearl oysters (Pinctada fucata) exposed to air and mechanical agitation Rhiannon P. Kuchel, Sham Nair, David A. Raftos Show preview | PDF (361 K) | Related articles | Related reference work articles Highlights ► We investigated the effects of simulated husbandry and handling on Pinctada fucata. ► GST and PRx declined significantly 60 min after exposure to air MA. ► GPx transcription declined significantly 60 min after exposure to MA. ► HSP-70 was not significantly affected by either treatments.

Physiology and Endocrinology: Fish

Dietary supplementation of arginine and/or glutamine influences growth performance, immune responses and intestinal morphology of hybrid striped bass (Morone chrysops × Morone saxatilis) Zhenyan Cheng, Delbert M. Gatlin III, Alejandro Buentello Show preview | PDF (201 K) | Related articles | Related reference work articles Highlights ► We test Arg/Gln supplementation to improve immune response in hybrid striped bass. ► Several indicators of this response were improved upon supplementation. ► Other parameters displayed positive trends with Arg and/or Gln dietary enrichment. ► Intestinal structures and likely nutrient absorption were also positively affected.

Physiology and Endocrinology: Molluscs and Crustaceans

Effect of periodic light color change on the molting frequency and growth of Litopenaeus vannamei Biao Guo, Yingchun Mu, Fang Wang, Shuanglin Dong Show preview | PDF (375 K) | Related articles | Related reference work articles Highlights ► Growth of Litopenaeus vannamei in six light color treatments was tested. ► Suitable periodic fluctuation of light color could promote the growth. ► High FId and FCEd were one reason for the better growth. ► Higher energy allocation for growth was another reason for the better growth. ► Periodic light fluctuation was more suitable to the industrialized shrimp culture.

Molecular cloning and expression of hepatopancreas glutamine synthetase in the Pacific white shrimp, Litopenaeus vannamei, induced by acute hypo-osmotic stress Hong-yu Liu, Wu-wei Sun, Bei-ping Tan, Shu-yan Chi, Xiao-hui Dong, Qi-hui Yang Show preview | PDF (1150 K) | Related articles | Related reference work articles

Sustainability and Society

Value-chain analysis — An assessment methodology to estimate Egyptian aquaculture sector performance Graeme Macfadyen, Ahmed Mohamed Nasr-Alla, Diaa Al‐Kenawy, Mohamed Fathi, Hussien Hebicha, Ahmed Mohammed Diab, Samy Mohmed Hussein, Ramadan Mohamed Abou-Zeid, Gamal El-Naggar

Aquaculture Journals Page: 141 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (325 K) | Related articles | Related reference work articles Highlights ► We conduct a value-chain analysis of the Egyptian aquaculture sector. ► The industry generates $775 of value-added for each tonne of fish produced. ► Every 100 tonnes of fish produced creates 14 full-time equivalent jobs. ► Value-chain analysis helps identify critical factors affecting sector performance.

Previous – Top – Next

VOLUME 364-365, ISSUE , MAY 2012 Website

Research articles

This issue is In Progress but contains articles that are final and fully citable. For recently accepted articles, see Articles in Press.

Diseases

Dietary effects of garlic (Allium sativum) on haemato-immunological parameters, survival, growth, and disease resistance against Vibrio harveyi infection in Asian sea bass, Lates calcarifer (Bloch) Allah Dad Talpur, Mhd Ikhwanuddin Show preview | PDF (631 K) | Related articles | Related reference work articles Highlights ► Garlic led to enhance the immunity by making L. calcarifer resistant to V. harveyi infection. ► Garlic added feed led to increase the survival for all treated groups. ► A significant increase in growth, weight-gain and feed conversion was seen in treated groups. ► Garlic feed significantly affected the blood parameters and blood indices.

The effects of garlic-supplemented diets on antibacterial activity against Streptococcus iniae and on growth in orange-spotted grouper, Epinephelus coioides J.J. Guo, C.M. Kuo, Y.C. Chuang, J.W. Hong, R.L. Chou, T.I. Chen Show preview | PDF (420 K) | Related articles | Related reference work articles Highlights ► Allicin level in garlic was quantified by the HPLC method. ► Garlic has strong antibacterial ability against Streptococcus iniae in vitro. ► Garlic in the diet of grouper is able to improve feed efficiency. ► Garlic enhances gain weight and resistance against S. iniae in the grouper.

Efficacy of emamectin benzoate in the control of Caligus rogercresseyi on farmed Atlantic salmon (Salmo salar L.) in Chile from 2006 to 2007 Sandra Bravo, María T. Silva, Gustavo Monti Show preview | PDF (610 K) | Related articles | Related reference work articles Highlights ► Failures of the treatments with emamectin benzoate are explained by the lost of sensitivity of C. rogercresseyi. ► Differences in prevalence and abundance of C.

Aquaculture Journals Page: 142 of 331

Aquaculture Journals – Table of Contents

rogercresseyi are explained by the oceanographic conditions. ► Salinity is the main variable affecting the abundance of C. rogercresseyi.

Selective breeding and preliminary commercial performance of Penaeus vannamei for resistance to white spot syndrome virus (WSSV) Yongchun Huang, Zhixin Yin, Shaoping Weng, Jianguo He, Sedong Li Show preview | PDF (739 K) | Related articles | Related reference work articles Highlights ► During year 2002 to 2007, 120 WSSV-resistant shrimp families were established. ► After selective breeding, P. vannamei survival rate after WSSV challenge increased. ► In commercial ponds, selected shrimp showed higher production and harvest weight.

Nutrition

Digestibility of Lupinus albus lupin meals in barramundi (Lates calcarifer) Simon Tabrett, David Blyth, Nicholas Bourne, Brett Glencross Show preview | PDF (192 K) | Related articles | Related reference work articles Highlights ► The digestibilities of white lupin (Lupinus albus) meals were studied in barramundi. ► Kernel meals of L. albus were richer in protein and lipid than the L. angustifolius. ► Protein digestibility was consistently high for cultivars of L. albus kernel meals. ► Energy digestibility of the L. albus was higher than that of other lupin meals.

Effects of different weaning strategies on survival and growth in Chinese longsnout catfish (Leiocassis longirostris Günther) larvae Bianzhi Liu, Xiaoming Zhu, Wu Lei, Yunxia Yang, Dong Han, Junyan Jin, Shouqi Xie Show preview | PDF (690 K) | Related articles | Related reference work articles Highlights ► We investigated the activities of digestive enzymes at different weaning strategies. ► Abrupt-weaning of larvae should be obtained after 10 dph. ► Co-feeding with Artemia could reduce the stress to larvae and could start at 6 dph.

The influence of ghrelin and des-ghrelin on feed intake, growth performance and hypothalamic NPY mRNA expression of grouper Epinephelus coioides Yu-Jie Gao, Li-Xia Tian, Hui-Jun Yang, Gui-Ying Liang, Yi-Rong Yue, Yong-Jian Liu Show preview | PDF (229 K) | Related articles | Related reference work articles Highlights ► Ghrelin supplemented in the diet stimulated feed intake and growth of grouper. ► Actions of ghrelin on grouper appear to mediate through NPY neuronal pathway. ► Des- ghrelin showed no effects on FI, WG and NPY mRNA expression of grouper.

Growth performance, feed utilisation and fatty acid deposition in Atlantic salmon, Salmo salar L., fed graded levels of high-lipid/high-EPA Yarrowia lipolytica biomass Bjarne Hatlen, Gerd Marit Berge, James Martin Odom, Harald Mundheim, Bente Ruyter Show preview | PDF (243 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 143 of 331

Aquaculture Journals – Table of Contents

► Atlantic salmon was fed high EPA Yarrowia lipolytica yeast biomass. ► Feeding fish 10, 20 or 30% dried yeast did not affect growth. ► Feed conversion was negatively affected at high yeast inclusion levels. ► Fillet fatty acid reflected the higher EPA:DHA ratio in the feeds added yeast. ► High retention of DPA and DHA, suggested conversion of EPA to DPA and DHA.

Growth performance, feed utilization and non-specific immune response of gilthead sea bream (Sparus aurata L.) fed graded levels of a bioprocessed soybean meal Fotini Kokou, George Rigos, Morgane Henry, Maroudio Kentouri, Maria Alexis Show preview | PDF (910 K) | Related articles | Related reference work articles Highlights ► Fish meal substitution by bioprocessed soy meal up to 40% did not affect growth. ► Protein efficiency is affected from 40% level of substitution. ► Phosporus is available even in the highest inclusion level of substitution. ► Bioprocessed soybean meal affects humoral and cellular immune response. ► At 60% substitution level morphological changes were observed in distal intestine.

Comparison of non-volatile compounds and sensory characteristics of Chinese mitten crabs (Eriocheir sinensis) reared in lakes and ponds: Potential environmental factors Li Kong, Chunfang Cai, Yuantu Ye, Dongxing Chen, Ping Wu, Erchao Li, Liqiao Chen, Lin Song Show preview | PDF (338 K) | Related articles | Related reference work articles Highlights ► Lake-produced crabs are redder, sweeter and more umami than pond-produced crab. ► No unpleasant odors or tastes were detected in either group of crabs. ► The microalgae and macrophytes contributed directly or indirectly to crab quality.

Physiology and Endocrinology

Annual reproductive cycle and reproductive efforts of the Manila clam Ruditapes philippinarum in Incheon Bay off the west coast of Korea using a histology- ELISA combined assay M. Jasim Uddin, Hyun-Sung Yang, Kwang-Jae Park, Chang-Keun Kang, Hyun-Sil Kang, Kwang- Sik Choi Show preview | PDF (971 K) | Related articles | Related reference work articles Highlights ► We investigated reproductive effort (RE)/annual reproductive cycle of Manila clam. ► RE and reproductive stage (RS) was simultaneously measured from each clam. ► ELISA- Histology combined assay enabled to assess quantity of eggs and RS. ► Gonad somatic index (GSI) of ripe clam ranged 20.9-29.6, or 2.5-13.8 million eggs. ► Spring blooming coincided with the rapid gonad maturation in late spring.

Physiology and Endocrinology: Fish

Acute stress response of European sea bass Dicentrarchus labrax under blue and white light Nafsika Karakatsouli, Panagiotis Katsakoulis, Georgios Leondaritis, Dimitris Kalogiannis, Sofronios E. Papoutsoglou, Stella Chadio, Nikolaos Sakellaridis

Aquaculture Journals Page: 144 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (185 K) | Related articles | Related reference work articles Highlights ► We investigated sea bass response to confinement when under blue or white light. ► A differential stress response was observed for fish reared in blue or white light. ► Cortisol response was higher under blue light. ► Brain serotonergic and/or dopaminergic response was higher under white light. ► Light spectrum emerges as a potential tool to manipulate fish acute stress response.

Dynamics of composition and morphology in oocytes of Eurasian perch, Perca fluviatilis L., during induced spawning Daniel Żarski, Sławomir Krejszeff, Ákos Horváth, Zoltán Bokor, Katarzyna Palińska, Katalin Szentes, Joanna Łuczyńska, Katarzyna Targońska, Krzysztof Kupren, Béla Urbányi, Dariusz Kucharczyk Show preview | PDF (928 K) | Related articles | Related reference work articles Highlights ► We investigated maturation process in hormonally stimulated Eurasian perch females. ► Histological and composition analysis were done at different maturational stages. ► Changes in ovaries composition were observed up to the maturation stage III. ► Histological analysis first time showed yolk proteolysis and egg hydration in perch. ► It is not recommended to induce perch females up to the maturation stage III.

Production Science

Assessment of chemical treatments for controlling Didemnum vexillum, other biofouling, and predatory sea stars in Pacific oyster aquaculture K.C. Rolheiser, A. Dunham, S.E. Switzer, C.M. Pearce, T.W. Therriault Show preview | PDF (882 K) | Related articles | Related reference work articles Highlights ► We tested chemical treatments to control pests in oyster aquaculture. ► Various concentrations of brine, freshwater, lime, and acetic acid were applied ► Target pests: biofouling (including Didemnum vexillum) and predatory sea stars ► 3 and 4% hydrated lime for 5 min were most effective in removing pests. ► These treatments did not adversely affect oyster survival and condition.

Effects of temperature on the intensive culture performance of larval and juvenile North American burbot (Lota lota maculosa) James M. Barron, Nathan R. Jensen, Paul J. Anders, Joshua P. Egan, Susan C. Ireland, Kenneth D. Cain Show preview | PDF (178 K) | Related articles | Related reference work articles Highlights ► Larval burbot grew faster as temperature increased up to 20 °C. ► Survival of larvae decreased as temperature increased up to 20 °C. ► Cannibalism of early stage larvae was elevated as temperature increased to 20 °C. ► Cannibalism was high in all temperatures for larvae approaching metamorphosis. ► Juveniles grew faster at 15 and 20 °C than in 10 °C.

Assessment of reproductive maturation of southern bluefin tuna (Thunnus maccoyii) in captivity Erin Bubner, Jessica Farley, Philip Thomas, Toby Bolton, Abigail Elizur

Aquaculture Journals Page: 145 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (2253 K) | Related articles | Related reference work articles Highlights ► Reproductive maturation of wild caught SBT held in captivity were examined. ► Predictions of capacity to reproduce in captivity from wild data is not reliable. ► Wild SBT held in captivity for up to 9 years can achieve sexual maturity. ► Sexually mature SBT broodstock can be sourced directly from Great Australian Bight.

Previous – Top – Next

Aquaculture Journals Page: 146 of 331

Aquaculture Journals – Table of Contents

AAAqqquuuaaacccuuullltttuuurrraaalll EEEnnngggiiinnneeeeeerrriiinnnggg

VOLUME 50, ISSUE 1, SEPTEMBER 2012 Website

Research articles

Mathematical principles of production management and robust layout design: Part I. 250-ton/year recirculating aquaculture system (RAS) Ilan Halachmi Show preview | PDF (777 K) | Related articles | Related reference work articles Highlights ► This study is concerned with the design and management ofaquacultural systems. ► A practical, solvable, 6-σ robust optimization were developed, validated, and implemented. ► 3 Growth phases with: 1, 8, and 24 culture tanks, arrival frequency of every 30 days. ► The proposed optimal layout can accommodate uncertainty and different fish species. ► Numerical values reflect local conditions; the methodology can be applied elsewhere.

Mathematical principles of production management and robust layout design: Part II. Upscaling to a 1000-ton/year recirculating aquaculture system (RAS) Ilan Halachmi Show preview | PDF (534 K) | Related articles | Related reference work articles Highlights ► Design and management of a large-scale, intensive RAS were addressed. ► A queuing- network, robust 6σ design, and optimization models were developed, combined and applied. ► Design criteria—turnover, fish biomass density, culture tank utilization, accommodation of two species—were met. ► The solution reflects local aquatic conditions; methodology can be applied elsewhere.

Kinetics of nitrogen compounds in a commercial marine Recirculating Aquaculture System V. Díaz, R. Ibáñez, P. Gómez, A.M. Urtiaga, I. Ortiz Show preview | PDF (763 K) | Related articles | Related reference work articles Highlights ► The evolution of nitrogen compounds in a commercial marine RAS has been experimentally assessed. ► Oxidation rate of ammonia within the trickle biofilter has been determined. ► ½-order/0-order kinetic expression and parameters describe satisfactorily nitrification kinetics. ► Nitrite did not undergo significant changes between the inlet and outlet of the biofilter.

Impact of depuration of earthy-musty off-flavors on fillet quality of Atlantic salmon, Salmo salar, cultured in a recirculating aquaculture system Gary S. Burr, William R. Wolters, Kevin K. Schrader, Steven T. Summerfelt Show preview | PDF (633 K) | Related articles | Related reference work articles Highlights ► Atlantic salmon grown in a recirculating aquaculture system contained off-flavors. ► The off-flavors were due to geosmin and 2-methylisoborneol in the salmon flesh. ► Salmon were depurated for a minimum of 10 days to provide acceptable tasting fish. ► Fillet quality was not compromised during the depuration period. ► Several geosmin-producing species of actinomycetes were isolated from the system. Aquaculture Journals Page: 147 of 331

Aquaculture Journals – Table of Contents

Nitrogen removal and changes to microbial communities in model flood/drain and submerged biofilters treating aquaculture wastewater Simon P. Gregory, Paul J. Dyson, David Fletcher, Philip Gatland, Robin J. Shields Show preview | PDF (861 K) | Related articles | Related reference work articles Highlights ► Flood/drain biofilters were compared to submerged biofilters for the treatment of marine aquaculture wastewater. ► Analysis of 16s rRNA and amoA genes by T-RFLP revealed distinct bacterial communities in the submerged and flood/drain biofilters. ► Removal of organic nitrogen and ammonia was higher in flood/drain biofilters. Removal of nitrites and nitrates was better in submerged biofilters. ► The use of combined flood/drain and submerged biofilters may offer the best solution to the treatment of aquaculture waste.

A note on oxygen supply in RAS: The effect of water temperature Ido Seginer, Noam Mozes Show preview | PDF (658 K) | Related articles | Related reference work articles Highlights ► Steady-state RAS models and data from actual sea-bream installations are used. ► Feed and oxygen required to grow fish to a certain size are independent of temperature. ► Supply by aeration of oxygen is limited by its required concentration in the water. ► Optimal air discharge of an airlift is independent of temperature or of gas (O2, CO2). ► Pure oxygen has advantage over airlifts for oxygen supply at high temperatures.

Previous – Top – Next

Aquaculture Journals Page: 148 of 331

Aquaculture Journals – Table of Contents

AAAqqquuuaaacccuuullltttuuurrreee IIInnnttteeerrrnnnaaatttiiiooonnnaaalll

VOLUME 20, PART 4, AUGUST 2012 Website

Research articles

Implicit price of mussel characteristics in the auction market Thong Tien Nguyen Download PDF (378.7 KB) View HTML

Technical efficiency in tilapia farming of Bangladesh: a stochastic frontier production approach Md. Ferdous Alam, Md. Akhtaruzzaman Khan and A. S. M. Anwarul Huq Download PDF (359.8 KB) View HTML

Pharmacological level of copper induces the immune and antioxidant mechanisms of Fenneropenaeus indicus conferring better protection against white spot syndrome virus infection Selven Subramannian and Rosamma Philip Download PDF (474.0 KB) View HTML

Application of microsatellite DNA parentage markers in the swimming crab Portunus trituberculatus Hongxia Wang, Zhaoxia Cui, Danhua Wu, Enmian Guo and Yuan Liu, et al. Download PDF (227.3 KB) View HTML

A dead-end filtration method to remove particle-associated pathogens in aquaculture systems Songzhe Fu, Jiazheng Shen, Kang Chen, Junling Tu and Ying Liu Download PDF (317.6 KB) View HTML

Exploring consumer’s preferences for farmed sea bream Gianluca Stefani, Riccardo Scarpa and Alessio Cavicchi Download PDF (454.3 KB) View HTML

Modulating gut microbiota and digestive enzyme activities of Artemia urmiana by administration of different levels of Bacillus subtilis and Bacillus licheniformis Hamid Reza Ahmadnia Motlagh, Mehrdad Farhangi, Gholamreza Rafiee and Farzaneh Noori Download PDF (351.0 KB) View HTML

Environmental conditions in a lagoon and their possible effects on shellfish contamination by Giardia and Cryptosporidium Matteo Francavilla, Pasquale Trotta, Marianna Marangi, Paolo Breber and Annunziata Giangaspero Download PDF (491.5 KB) View HTML

A comparative histopathological, immunohistochemical and nested-PCR study for diagnosis of infectious pancreatic necrosis in the naturally infected cultured rainbow trout (Oncorhynchus mykiss) Ahmad Oryan, Nasrollah Ahmadi, Mostafa Akhlaghi and Arsalan Hosseini Download PDF (369.2 KB) View HTML

Aquaculture Journals Page: 149 of 331

Aquaculture Journals – Table of Contents

Comparative evaluation of the fertilizer value of human urine, cow manure and their mix for the production of carp fingerlings in small holding tanks B. B. Jana, Sujoy Kumar Bag and Sukanta Rana Download PDF (287.0 KB) View HTML

Health and growth performance of the blue mussel (Mytilus edulis L.) from two hanging cultivation sites in the German Bight: a nearshore—offshore comparison M. Brenner, C. Buchholz, O. Heemken, B. H. Buck and A. Koehler Download PDF (675.2 KB) View HTML

Potential environmental effects of probiotics used in aquaculture Diego Iribarren, Paula Dagá, María Teresa Moreira and Gumersindo Feijoo Download PDF (293.4 KB) View HTML

Culture-independent characterization of the autochthonous gut microbiota of grouper Epinephelus coioides following the administration of probiotic Enterococcus faecium Yun-Zhang Sun, Hong-Ling Yang, Ru-Long Ma, Kun-Peng Huang and Ji-Dan Ye Download PDF (293.7 KB) View HTML

Book Review

G. L. Fletcher and M. L. Rise (eds): Aquaculture biotechnology Wiley-Blackwell, Oxford, 2012, XVIII + 379 pp, £130/€156 (Hardback), ISBN: 978-0-8138- 1028-7 Malcolm Jobling Download PDF (109.9 KB) View HTML

J. S. Lucas and P. C. Southgate (eds): Aquaculture—Farming aquatic animals and plants Wiley-Blackwell, Oxford, 2012, 2nd Edition, XVI + 629 pp, £75/€90 (Paperback), ISBN: 978- 1-4051-8858-6 Malcolm Jobling Download PDF (112.3 KB) View HTML

R. J. Roberts (ed): Fish pathology 4th edition, Wiley-Blackwell, Chichester, 2012, VIII + 581 pp, Hardback, £160/€192.50, ISBN: 978-1-4443-3282-7 Malcolm Jobling Download PDF (108.3 KB) View HTML

Previous – Top – Next

Aquaculture Journals Page: 150 of 331

Aquaculture Journals – Table of Contents

AAAqqquuuaaacccuuullltttuuurrreee NNNuuutttrrriiitttiiiooonnn

VOLUME 18, PART 4, AUGUST 2012 Website

Research articles

Review article

A review of nutritional biology and dietary requirements of redclaw crayfish Cherax quadricarinatus (von Martens 1868) (pages 349–368) I.P. SAOUD, A. GARZA DE YTA and J. GHANAWI Abstract Full Article (HTML) PDF(924K) References

Original articles

Factors affecting nutrient digestibility in rainbow trout (Oncorhynchus mykiss) fed a plant protein–based diet supplemented with microbial phytase (pages 369– 379) G.W. VANDENBERG, S.L. SCOTT and J. DE LA NOÜE Abstract Full Article (HTML) PDF(987K) References

Dietary zinc requirement of juvenile grass carp (Ctenopharyngodon idella) based on growth and mineralization (pages 380–387) J.-J. LIANG, H.-J. YANG, Y.-J. LIU, L.-X. TIAN and G.-Y. LIANG Abstract Full Article (HTML) PDF(869K) References

An assessment of grains and other starch sources in diets for barramundi (Lates calcarifer) – implications for nutritional and functional qualities of extruded feeds (pages 388–399) B. GLENCROSS, D. BLYTH, S. TABRETT, N. BOURNE, S. IRVIN, M. ANDERSON, T. FOX-SMITH and R. SMULLEN Abstract Full Article (HTML) PDF(1017K) References

Effects of dietary biotin supplement on growth, body composition, intestinal enzyme activities and microbiota of juvenile Jian carp (Cyprinus carpio var. Jian) (pages 400–410) S. ZHAO, L. FENG, Y. LIU, S.-Y. KUANG, L. TANG, J. JIANG, K. HU, W.-D. JIANG, S.-H. LI and X.-Q. ZHOU Abstract Full Article (HTML) PDF(917K) References

Adapting bioenergetic factorial modelling to understand the implications of heat stress on barramundi (Lates calcarifer) growth, feed utilisation and optimal protein and energy requirements – potential strategies for dealing with climate change? (pages 411–422) B.D. GLENCROSS and M. BERMUDES Abstract Full Article (HTML) PDF(1279K) References

Enzymes from the gut bacteria of Atlantic cod, Gadus morhua and their influence on intestinal enzyme activity (pages 423–431) C.C. LAZADO, C.M.A. CAIPANG and V. KIRON Abstract Full Article (HTML) PDF(1002K) References

Supplementation with 2-hydroxy-4-(methylthio)butanoic acid (HMTBa) in low fish meal diets for the white shrimp, Litopenaeus vannamei (pages 432–440)

Aquaculture Journals Page: 151 of 331

Aquaculture Journals – Table of Contents

C.L. BROWDY, A.S. BHARADWAJ, J.A. VENERO and A.J.P. NUNES Abstract Full Article (HTML) PDF(806K) References

Short-term food deprivation before a fish oil finishing strategy improves the deposition of n-3 LC-PUFA, but not the washing-out of C18 PUFA in rainbow trout (pages 441–456) T. THANUTHONG, D.S. FRANCIS, S.P.S.D. SENADHEERA, P.L. JONES and G.M. TURCHINI Abstract Full Article (HTML) PDF(986K) References

Effects of brewer’s yeast extract on growth performance and health of juvenile pikeperch Sander lucioperca (L.) (pages 457–464) S. JARMOŁOWICZ, Z. ZAKĘŚ, A. SIWICKI, A. KOWALSKA, M. HOPKO, E. GŁĄBSKI, K. DEMSKA-ZAKĘŚ and K. PARTYKA Abstract Full Article (HTML) PDF(801K) References

Previous – Top – Next

Aquaculture Journals Page: 152 of 331

Aquaculture Journals – Table of Contents

AAAqqquuuaaacccuuullltttuuurrreee RRReeessseeeaaarrrccchhh

VOLUME 43, PART 7, JULY 2012 Website

Research articles

Review Articles

Global scale of freshwater prawn farming (pages 960–969) Michael B. New and C. Mohanakumaran Nair Abstract Full Article (HTML) PDF(576K) References

Current status and prospects of farming the giant river prawn Macrobrachium rosenbergii (De Man) in Bangladesh (pages 970–983) Md Abdul Wahab, Sk Ahmad-Al-Nahid, Nesar Ahmed, Mohammad M Haque and Mahmudul Karim Abstract Full Article (HTML) PDF(341K) References

Current status and prospects of farming the giant river prawn (Macrobrachium rosenbergii (De Man 1879) and the Amazon river prawn Macrobrachium amazonicum (Heller 1862)) in Brazil (pages 984–992) Helcio Luis de Almeida Marques and Patricia M C Moraes-Valenti Abstract Full Article (HTML) PDF(178K) References

Current status and prospects of farming the giant river prawn (Macrobrachium rosenbergii) and the oriental river prawn (Macrobrachium nipponense) in China (pages 993–998) Fu Hongtuo, Jiang Sufei and Xiong Yiwei Abstract Full Article (HTML) PDF(182K) References

Current status and prospects of farming the giant river prawn Macrobrachium rosenbergii (De Man) and the monsoon river prawn Macrobrachium malcolmsonii (H.M. Edwards) in India C Mohanakumaran Nair and K R Salin Abstract Full Article (HTML) PDF(679K) References

Current status & prospects of farming the giant river prawn (Macrobrachium rosenbergii de Man 1879) in Thailand (pages 1015–1022) Uthairat Na-Nakorn and Orapint Jintasataporn Abstract Full Article (HTML) PDF(236K) References

Current status and prospects of farming the giant river prawn (Macrobrachium rosenbergii De Man 1879) in the United States (pages 1023–1028) James H Tidwell Abstract Full Article (HTML) PDF(159K) References

A review on the diseases of freshwater prawns with special focus on white tail disease of Macrobrachium rosenbergii (pages 1029–1037) Devika Pillai and Jean Robert Bonami Abstract Full Article (HTML) PDF(389K) References

Original Articles

Aquaculture Journals Page: 153 of 331

Aquaculture Journals – Table of Contents

The case for all-female freshwater prawn,Macrobrachium rosenbergii (DeMan), culture (pages 1038–1048) Spencer Malecha Abstract Full Article (HTML) PDF(424K) References

Current status of the giant freshwater prawn (Macrobrachium rosenbergii) industry in China, with special reference to live transportation (pages 1049– 1055) Guoliang Yang, Mike Frinsko, Xuefeng Chen, Junyi Wang, Guo Hu and Qiang Gao Abstract Full Article (HTML) PDF(209K) References

Harvesting, post-harvest handling and live-transport of freshwater prawns in the United States (pages 1056–1063) Michael O Frinsko Abstract Full Article (HTML) PDF(724K) References

Previous – Top – Next

VOLUME 43, PART 8, JULY 2012 Website

Research articles

Original Articles

Prevention of surface death of horse mackerel (Trachurus mediterraneus) larvae by the addition of egg white and camphor grain to rearing water (pages 1065– 1070) Ilhan Yandi and Ilhan Altinok Abstract Full Article (HTML) PDF(666K) References

The first identification of molluscan Ecsit in the Pacific oyster, Crassostrea gigas, and its expression against bacterial challenge (pages 1071–1080) Linlin Zhang, Li Li and Guofan Zhang Abstract Full Article (HTML) PDF(1042K) References

Growth performance of Nile tilapia, Oreochromis niloticus, fed diets containing levels of pyridoxine and haematological response under heat stress (pages 1081– 1088) Caroline Pelegrina Teixeira, Margarida Maria Barros, Luiz Edivaldo Pezzato, Ademir Calvo Fernandes, Jr, João Fernando Albers Koch and Carlos Roberto Padovani Abstract Full Article (HTML) PDF(595K) References

Probiotic activity of bacteria associated with egg capsules of Concholepas concholepas (common name ‘Loco’) (pages 1089–1095) Yanett E Leyton, Rodrigo A Varas- Psijas and Carlos E Riquelme Abstract Full Article (HTML) PDF(622K) References

Immunomodulatory effect of recombinant RNA-dependent RNA polymerase protein of Macrobrachium rosenbergii nodavirus in giant freshwater prawn M. rosenbergii (pages 1096–1106) Pramoda Kumar Sahoo, Mudagandur S Shekhar, Abhilipsa Das, Manickam Dilli Kumar, Bindu R Pillai and A S Sahul Hameed Abstract Full Article (HTML) PDF(675K) References

Aquaculture Journals Page: 154 of 331

Aquaculture Journals – Table of Contents

Debaryomyces hansenii L2-enriched diet enhances the immunity status, gene expression and intestine functionality in gilthead seabream (Sparus aurata L.) (pages 1107–1118) Martha Reyes-Becerril, Felipe Ascencio-Valle, José Meseguer, Silvana Teresa Tapia-Paniagua, Miguel Angel Moriñigo and María Ángeles Esteban Abstract Full Article (HTML)PDF(717K) References

Digestive dynamics during chyme formation of Octopus maya (Mollusca, Cephalopoda) (pages 1119–1126) Rosario Martínez, Ronald Santos, Maite Mascaró, Lenin Canseco, Claudia Caamal-Monsreal and Carlos Rosas Abstract Full Article (HTML) PDF(606K) References

Effect of temperature on survival, growth and development of Mytilus galloprovincialis larvae (pages 1127–1133) Clara Sánchez Lazo and Inés Martínez Pita Abstract Full Article (HTML) PDF(687K) References

Effect of diet on the lipid composition of the commercial clam Donax trunculus (Mollusca: ): sex-related differences (pages 1134–1144) Inés Martínez-Pita, Ismael Hachero-Cruzado, Clara Sánchez-Lazo and Oscar Moreno Abstract Full Article (HTML) PDF(673K) References

Molecular identification and tissue distribution of peroxisome proliferators activated receptor gamma transcript in cultured Thunnus orientalis (pages 1145– 1158) Yasuo Agawa, Tomoki Honryo, Ayako Ishii, Toru Kobayashi, Hiromi Oku and Yoshifumi Sawada Abstract Full Article (HTML) PDF(940K) References

Reproductive performance, survival and development of nauplii and copepodites, sex ratio and adult life expectancy of the harpacticoid copepod, Euterpina acutifrons, fed different microalgal diets (pages 1159–1169) Thomas Camus and Chaoshu Zeng Abstract Full Article (HTML) PDF(641K) References

Aflatoxin B1 induced alterations in the stability of the lysosomal membrane in Oreochromis mossambicus (Peters, 1852) (pages 1170–1175) Suchitra Varior and Babu Philip Abstract Full Article (HTML) PDF(200K) References

Molecular cloning and expression analysis of a selenium-independent identified from Manila clam Venerupis philippinarum (pages 1176– 1183) Lei Zhang, Xuanxuan Ning, Leilei Chen, Chenghua Li, Feng Liu, Qing Wang, Huifeng Wu and Jianmin Zhao Abstract Full Article (HTML) PDF(765K) References

Influence of dietary garlic (Allium sativum) on the antioxidative status of rainbow trout (Oncorhynchus mykiss) (pages 1184–1193) Abdonnaser Mohebbi, Amin Nematollahi, Eisa Ebrahimi Dorcheh and Farnaz Goodarzian Asad Abstract Full Article (HTML) PDF(352K) References

Aquaculture Journals Page: 155 of 331

Aquaculture Journals – Table of Contents

Activation of intestinal epithelial cells in Atlantic cod, Gadus morhua, induced by algal derivatives (pages 1194–1199) Carlo C. Lazado and Christopher Marlowe A. Caipang Abstract Full Article (HTML) PDF(238K) References

Effects of dietary phosphorus and starch levels on growth performance, body composition and nutrient utilization of grass carp (Ctenopharyngodon idellaVal.) (pages 1200–1208) J-J Liang, Y-J Liu, L-X Tian, H-J Yang and G-Y Liang Abstract Full Article (HTML) PDF(184K) References

Effect of plant protein concentrates on nutrition physiology of Litopenaeus vannamei (Boone, 1883) juveniles (pages 1209–1222) C. Maldonado, S. Guillen, O. Pantoja, L. Arena, M. Ezquerra-Bauer, C. A. Alvarez-González, G. Cuzon and G. Gaxiola Abstract Full Article (HTML) PDF(267K) References

Apparent digestibility coefficient of poultry by-product meal (PBM) in diets of Penaeus monodon (Fabricius) and Litopenaeus vannamei (Boone), and replacement of fishmeal with PBM in diets of P. monodon (pages 1223–1231) Lin Luo, Jia Wang, Qing Pan, Min Xue, Yanjun Wang, Xiufeng Wu and Peng Li Abstract Full Article (HTML) PDF(192K) References

Seasonal patterns in the community of gill monogeneans on wild versus cultured orange-spotted grouper, Epinephelus coioidesHamilton, 1822 in Daya Bay, South China Sea (pages 1232–1242) Luo Yufa and Yang Tingbao Abstract Full Article (HTML) PDF(222K) References

Larval rearing of African carp, Labeo parvusBoulenger, 1902 (Pisces: Cyprinidae), using live food and artificial diet under controlled conditions (pages 1243–1250) Elie Montchowui, Philippe Lalèyè, Emile N'tcha, Jean-Claude Philippart and Pascal Poncin Abstract Full Article (HTML) PDF(235K) References

Previous – Top – Next

VOLUME 43, PART 9, AUGUST 2012 Website

Research articles

Improved hatchery-rearing techniques for juvenile production of blue swimming crab, Portunus pelagicus (Linnaeus, 1758) (pages 1251–1259) Mhd Ikhwanuddin, Juariah Hafsya Mansor, Abol-Munafi Ambok Bolong and Shabdin Mohd Long Abstract Full Article (HTML) PDF(185K) References

Embryonic and larval development of black skirt tetra (Gymnocorymbus ternetzi,Boulenger, 1895) under laboratory conditions (pages 1260–1275) İhsan Çelik, Pınar Çelik, Şükran Cirik, Mert Gürkan and Sibel Hayretdağ Abstract Full Article (HTML) PDF(800K) References

Aquaculture Journals Page: 156 of 331

Aquaculture Journals – Table of Contents

Effects of replacement of dietary fish oil with soybean oil on growth performance and tissue fatty acid composition in marine herbivorous teleost Siganus canaliculatus (pages 1276–1286) Shude Xu, Shuqi Wang, Liang Zhang, Cuihong You and Yuanyou Li Abstract Full Article (HTML) PDF(247K) References

Traditional antibacterial activity of freshwater microalga Spirulina platensis to aquatic pathogens (pages 1287–1295) Jyotirmayee Pradhan, Basanta Kumar Das, Swagatika Sahu, Nilima Priyadarshini Marhual, Anil K Swain, Bibudhendra Kumar Mishra and Ambekar E Eknath Abstract Full Article (HTML) PDF(361K) References

Promotion of initial swimbladder inflation in Pacific bluefin tuna, Thunnus orientalis (Temminck and Schlegel), larvae (pages 1296–1305) Michio Kurata, Manabu Seoka, Yoshizumi Nakagawa, Yasunori Ishibashi, Hidemi Kumai and Yoshifumi Sawada Abstract Full Article (HTML) PDF(272K) References

Complete mitochondrial genome of the sea cucumber Stichopus sp. and its application in the identification of this species (pages 1306–1316) Sigang Fan, Chaoqun Hu, Lvping Zhang, Hongyan Sun, Jing Wen and Peng Luo Abstract Full Article (HTML) PDF(247K) References

Dietary influence on growth and development of flat oyster, Ostrea angasi (Sowerby, 1871), larvae (pages 1317–1327) Stephan O'Connor, Natalie Moltschaniwskyj, Christopher J S Bolch and Wayne O'Connor Abstract Full Article (HTML) PDF(464K) References

Dietary supplement of fructooligosaccharides and Bacillus subtilis enhances the growth rate and disease resistance of the sea cucumber Apostichopus japonicus (Selenka) (pages 1328–1334) Yongxin Sun, Zhixin Wen, Xuejun Li, Nan Meng, Rui Mi, Yajie Li and Shuying Li Abstract Full Article (HTML) PDF(204K) References

Growth, survival and enzyme activity of lions-paw scallop (Nodipecten subnodosus) spat treated with probiotics at the hatchery (pages 1335–1343) Andrés Granados-Amores, Ángel I Campa-Córdova, Rubén Araya, José M Mazón-Suástegui and Pedro E Saucedo Abstract Full Article (HTML) PDF(267K) References

Combined effect of temperature, salinity and density on the growth and feed utilization of Nile tilapia juveniles (Oreochromis niloticus) (pages 1344–1356) Qiang Jun, Xu Pao, Wang Haizhen, Li Ruiwei and Wang Hui Abstract Full Article (HTML) PDF(465K) References

The incidence of suspected white spot syndrome virus in semi-intensive and extensive shrimp farms in Bangladesh: implications for management (pages 1357–1371) Manjurul Karim, Rayhan Hayat Sarwer, Alan C. Brooks, Rick Gregory, Murshed E. Jahan and Ben Belton Abstract Full Article (HTML) PDF(449K) References

Interactive effects of salinity on oxygen consumption, ammonium excretion, osmoregulation and Na+/K+-ATPase expression in the bullseye puffer (Sphoeroides annulatus, Jenyns 1842) (pages 1372–1383)

Aquaculture Journals Page: 157 of 331

Aquaculture Journals – Table of Contents

Javier Pérez-Robles, Ana Denisse Re, Ivone Giffard-Mena and Fernando Díaz Abstract Full Article (HTML) PDF(246K) References

The effect of lysine-supplemented wheat gluten-based diet on yellow perch Perca flavescens (Mitchill) performance (pages 1384–1391) Karolina Kwasek, Konrad Dabrowski, Kyle Ware, John Mark Reddish and Macdonald Wick Abstract Full Article (HTML) PDF(334K)

Effect of dietary conjugated linoleic acid levels on growth performance, muscle fatty acid profile, hepatic intermediary metabolism and antioxidant responses in genetically improved farmed Tilapia strain of Nile tilapia Oreochromis niloticus (pages 1392–1403) Zhi Luo, Xiao-Ying Tan, Cai-Xia Liu, Xiao-Dong Li, Xiang-Jiang Liu and Wen-Qiu Xi Abstract Full Article (HTML) PDF(200K) References

Effect of partial replacement of dietary monocalcium phosphate with neutral phytase on growth performance and phosphorus digestibility in gibel carp, Carassius auratus gibelio (Bloch) (pages 1404–1413) Li Wei Liu, Jianmei Su and Yuliang Luo Abstract Full Article (HTML) PDF(200K) References

Previous – Top – Next

Aquaculture Journals Page: 158 of 331

Aquaculture Journals – Table of Contents

CCCuuurrrrrreeennnttt OOOpppiiinnniiiooonnn iiinnn MMMiiicccrrrooobbbiiiooolllooogggyyy

VOLUME 15, PART 3, JUNE 2012 Website

Research article

Ecology and industrial microbiology Edited by Bruno Lemaitre, Jeremy Herren and Eric Johnson

Insect–microbe interactions: the good, the bad and the others Jeremy Herren, Bruno Lemaitre Show preview | PDF (166 K) | Related articles | Related reference work articles

How the insect pathogen bacteria Bacillus thuringiensis and Xenorhabdus/Photorhabdus occupy their hosts Christina Nielsen-LeRoux, Sophie Gaudriault, Nalini Ramarao, Didier Lereclus, Alain Givaudan Show preview | PDF (854 K) | Related articles | Related reference work articles Highlights ► Lepidopteran larvae are useful models to study host–pathogen interactions. ► Outline of the virulence factors of B. thuringiensis, Photorhabdus and Xenorhabdus. ► Bacterial factors contribute to pathogenesis at several infection sites and stages. ► Quorum sensing and two component systems control bacterial virulence. ► Poreforming toxins and metalloproteases are important for host barrier attack.

Strain improvement of fungal insecticides for controlling insect pests and vector-borne diseases Weiguo Fang, Philippe Azimzadeh, Raymond J St. Leger Show preview | PDF (641 K) | Related articles | Related reference work articles Highlights ► Review strategies for genetically modifying fungi for virulence improvement. ► Improve the efficacy of fungal insecticides to control vector-borne diseases. ► Highlight recent advances in fungal pathogenesis in insects. ► Discuss the use of genetically modified fungi to control malaria in field.

Yersinia–flea interactions and the evolution of the -borne transmission route of plague Iman Chouikha, B Joseph Hinnebusch Show preview | PDF (1077 K) | Related articles | Related reference work articles Highlights ► Flea-borne transmission of Yersinia pestis is a recent evolutionary phenomenon. ► Y. pestis biofilm formation in the flea gut is important for transmission. ► Y. pestis biofilm requires hms genes and enzymes controlling c-di-GMP levels. ► Y. pestis regulates its gene expression to specifically adapt to the flea vector. ► Gene gain and gene loss contributed to the evolution of flea-borne transmission.

The genome biology of phytoplasma: modulators of plants and insects Akiko Sugio, Saskia A Hogenhout

Aquaculture Journals Page: 159 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (1581 K) | Related articles | Related reference work articles Highlights ► Phytoplasmas have dual-host life cycles involving plants and insects. ► Phytoplasmas have reduced genomes rich in mobile genetic elements. ► The majority of phytoplasma effector genes lie on mobile genetic elements. ► Phytoplasma effectors alter plant development and aid insect colonization. ► Phytoplasma effectors suppress plant defense to insects.

Mutualism meltdown in insects: bacteria constrain thermal adaptation Jennifer J Wernegreen Show preview | PDF (656 K) | Related articles | Related reference work articles Highlights ► Theory tells us that highly dependent mutualisms are prone to breaking down under climate change. ► Bacterial endosymbionts of insects influence host fitness in a temperature-dependent manner. ► Obligate mutualists of insects encode destabilized proteins and show vulnerability to heat. ► Heat sensitivity of mutualists may constrain thermal tolerance and adaptation of insect hosts. ► We need to clarify how ecologically relevant temperatures impact insect–bacterial interactions.

Making (good) use of Wolbachia: what the models say Fabrice Vavre, Sylvain Charlat Show preview | PDF (528 K) | Related articles | Related reference work articles Highlights ► Wolbachia bacteria can invade arthropod populations through cytoplasmic incompatibility. ► They may also block transmission of pathogens by arthropod vectors. ► Introduction of Wolbachia to fight infectious diseases is a promising strategy. ► Theoretical models on host–Wolbachia interactions can guide release programs. ► They should be further developed to assess the sustainability of control methods.

Symbiont recruitment versus ant-symbiont co-evolution in the attine ant– microbe symbiosis Ulrich G Mueller Show preview | PDF (806 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Fungus-farming ants protect their fungal gardens against Escovopsis garden-disease. ► Pseudonocardia bacteria on the ant integument are thought to specifically suppress Escovopsis. ► A decade of research focused on Escovopsis–Pseudonocardia arms-race co- evolution. ► Recently, assumptions of Escovopsis–Pseudonocardia co-evolution could not be verified. ► Biofilms on the ant integument may protect the ants primarily against ant diseases.

Mosquito/microbiota interactions: from complex relationships to biotechnological perspectives Irene Ricci, Claudia Damiani, Aida Capone, Chenoa DeFreece, Paolo Rossi, Guido Favia Show preview | PDF (655 K) | Related articles | Related reference work articles Highlights ► An overview of the complex relationships between mosquito and its microbiota is provided. ► We describe the impact that the microbiota has on several aspects of

Aquaculture Journals Page: 160 of 331

Aquaculture Journals – Table of Contents

mosquito biological traits as nutrition, defense and development. ► We describe how these complex relationships may open perspectives for the mosquito borne diseases control.

Anopheles gambiae pathogen susceptibility: the intersection of genetics, immunity and ecology Christian Mitri, Kenneth D Vernick Show preview | PDF (444 K) | Related articles | Related reference work articles Highlights ► Mosquito vectors of disease vary between individuals for pathogen infection. ► Pathogen susceptibility is controlled by immunogenetics and ecological factors. ► Studies of pathogen susceptibility in a single mosquito colony are oversimplified.

Learning from the past: historical aspects of bacterial toxins as pharmaceuticals Sabine Pellett Show preview | PDF (697 K) | Related articles | Related reference work articles Highlights ► Several bacterial toxins have characteristics that make them useful as pharmaceuticals. ► Botulinum neurotoxins are frequently used in medicine for various purposes. ► Suggestions for therapeutic uses of botulinum neurotoxins date back to the early 19th century. ► This history underscores the importance of basic research in drug development.

Therapeutic targets and recent advances in protein immunotoxins Madhumathi J, Rama S Verma Show preview | PDF (901 K) | Related articles | Related reference work articles Highlights ► Immunotoxins (ITs) are used for targeted therapy of cancer and auto-immune diseases. ► Cytokine and growth factor receptors or specific surface antigens are targeted. ► IT constructs have been used in clinical trials and one is FDA approved for therapy. ► Immunogenicity, toxicity and tumor penetration are major challenges for IT therapy. ► Recent formats with human proteins or bispecific antibodies overcome limitations.

Bioassays for evaluation of medical products derived from bacterial toxins Thea Sesardic Show preview | PDF (677 K) | Related articles | Related reference work articles Highlights ► Bioassays for potency and safety are largely dependent on animals. ► Review updates reader on new alternative bioassays considered for potency and safety of products derived from toxins. ► Protection models by toxin challenge can be replaced by serological correlates provided that toxin neutralization is established. ► In vitro assays for toxins take into account enzyme activity and receptor binding properties. ► Cell-based assays are in development for several toxins with stem cells considered as highly promising model for neurotoxins.

Vaccines against botulism Andrew P-A Karalewitz, Joseph T Barbieri Show preview | PDF (2148 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 161 of 331

Aquaculture Journals – Table of Contents

► We describe the molecular properties of botulinum neurotoxin (BoNT) and tetanus neurotoxin (TeNT). ► We examine the history and current statue of vaccines against botulism. ► Future BoNT vaccines will utilize recombinant holo-BoNT toxoid and/or subunit vaccine strategies. ► Natural BoNT variants challenge the development of a pan- BoNT vaccine.

Clinical applications of botulinum toxin Dirk Dressler Show preview | PDF (501 K) | Related articles | Related reference work articles Highlights ► Botulinum Toxin (BT) may block the neuromuscular junction and the autonomic innervation of sweat, tear and salivary glands and the smooth muscles. ► This mechanism is the basis for BT's therapeutic use in a large number of medical specialties. ► BT's main indications are dystonia, spasticity, cerebral palsy, hyperhidrosis, hypersalivation, bladder dysfunction, pain and muscular wrinkles. ► Adverse effects are usually mild and always transient. BT type B may have additional systemic autonomic adverse effects.

Immunogenicity assessment in non-clinical studies Steven J Swanson, Jeanine Bussiere Show preview | PDF (392 K) | Related articles | Related reference work articles Highlights ► The value of determining non-clinical immunogenicity is described. ► Methods for detecting immunogenicity are compared. ► A strategy for non-clinical immunogenicity assessment is presented.

Special section: Microbial proteomics Edited by Bertrand Séraphin and Robert Hettich

Microbial proteomics: the quiet revolution Bertrand Séraphin, Robert Hettich Show preview | PDF (158 K) | Related articles | Related reference work articles

Extreme challenges and advances in archaeal proteomics Julie A Maupin-Furlow, Matthew A Humbard, Phillip Aaron Kirkland Show preview | PDF (272 K) | Related articles | Related reference work articles Highlights ► Archaea display amazing physiological properties that are of interest to understand at the molecular level. ► Proteomics provides an avenue for scientists to discover new aspects related to the molecular physiology of archaea. ► Unusual properties of archaeal proteomes are highlighted in this review. ► High-throughput and specialized mass spectrometry-based proteomic studies of archaea are also described.

Proteomics reveals evidence of cross-talk between protein modifications in bacteria: focus on acetylation and phosphorylation Boumediene Soufi, Nelson C Soares, Vaishnavi Ravikumar, Boris Macek Show preview | PDF (485 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 162 of 331

Aquaculture Journals – Table of Contents

► We provide an overview of protein phosphorylation and acetylation in bacteria. ► We note that numerous proteins were shown to carry both modifications. ► We point to emerging concept of cross-talk between bacterial protein modifications. ► We discuss current examples of cross-talk between protein modifications in bacteria.

Global relative and absolute quantitation in microbial proteomics Andreas Otto, Jörg Bernhardt, Michael Hecker, Dörte Becher Show preview | PDF (1562 K) | Related articles | Related reference work articles Highlights ► Global quantitation studies are indispensable in microbial proteomics. ► Proteome studies reflect the status quo of the cells’ key components. ► Relative and absolute proteome studies rely on gel-based and gel- free techniques. ► Integration of data with other ‘omic techniques points out to systems biology approaches. ► Workflows applied achieving high coverage of proteome data are reviewed.

Microbial metaproteomics: identifying the repertoire of proteins that microorganisms use to compete and cooperate in complex environmental communities Robert L. Hettich, Ritin Sharma, Karuna Chourey, Richard J Giannone Show preview | PDF (900 K) | Related articles | Related reference work articles Highlights ► Multi-dimensional LC-MS provides deep metaproteome measurements. ► High throughput and mass accuracy capabilities for MS are critical for metaproteome measurements. ► Metaproteomics provides functional information for bioremediation of soils or sludge water. ► Metaproteomics provides information about host and microbial proteins in plant and human samples.

Properties of probiotic bacteria explored by proteomic approaches Maarten van de Guchte, Thibault Chaze, Gwénaël Jan, Michel-Yves Mistou Show preview | PDF (454 K) | Related articles | Related reference work articles Highlights ► A bacterial strain is considered probiotic when it exerts a health-beneficial effect. ► Mechanistic knowledge on probiotic effects will serve to substantiate health claims. ► Proteomic studies identified bacterial proteins relevant to probiotic behavior. ► Surface- exposed proteins belong to the key players in the bacteria–host dialog. ► Proteomic approaches allow the study of bacteria–host crosstalk in vivo.

Molecular mechanisms of probiotic action: a proteomic perspective Rosa Anna Siciliano, Maria Fiorella Mazzeo Show preview | PDF (376 K) | Related articles | Related reference work articles Graphical abstract

Aquaculture Journals Page: 163 of 331

Aquaculture Journals – Table of Contents

Highlights ► Proteomics contributed to clarify mechanisms of adaptation to GIT environment. ► Proteomic and in vitro tests led to identify proteins involved in host-adhesion. ► Moonlighting proteins (ENO, GAPDH, EF-Tu, etc.) act as adhesion promoting factors. ► Several extracellular proteins have also immunomodulatory properties. ► Proteomics may have a role in selecting new strains with predictable functionality.

The essence on mass spectrometry based microbial diagnostics Magdalena Kliem, Sascha Sauer Show preview | PDF (341 K) | Related articles | Related reference work articles Highlights ► Mass spectrometry analysis of protein mass patterns has been adapted for the routine identification of bacteria. ► This molecular-phenotyping method provides easy and rapid identification of bacteria and other microorganisms. ► The method is currently being implemented in many laboratories to improve routine microbial diagnostics. ► Reliable reference spectra and further validation will increase its wide acceptance for microbial diagnostics. ► Mass spectrometry can be applied for genotypic detection of microbial nucleic acids or for functional assays.

Previous – Top – Next

VOLUME 15, PART 4, AUGUST 2012 Website

Research article

Host--microbe interactions: fungi Edited by Mihai Netea and Gordon Brown

Fungal infections: the next challenge Mihai G Netea, Gordon D Brown Show preview | PDF (166 K) | Related articles | Related reference work articles

Importance of the Candida albicans cell wall during commensalism and infection Neil AR Gow, Bernhard Hube Aquaculture Journals Page: 164 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (1576 K) | Related articles | Related reference work articles Highlights ► The Candida cell wall contains virulence factors, antigens and PAMPs. ► The cell wall is cortical for the transition between commensalism and virulence. ► The yeast to hypha transition markedly affects wall composition and immune reactivity. ► Cellular morphogenesis is critical for the equilibrium between commensalism and virulence.

Immunology of fungal infections: lessons learned from animal models Chad Steele, Floyd L Wormley Jr Show preview | PDF (352 K) | Related articles | Related reference work articles Highlights ► Animal models are vital for deciphering protective immunity against fungi. ► Activation of C-type lectin signaling induces protective antifungal responses. ► Th1 and Th17-type cells are critical mediators of antifungal immune responses. ► Naturally occurring IgM augments protective immune responses against fungi. ► MAbs targeting antigens common among fungi can mediate broad-spectrum protection.

Unravelling fungal immunity through primary immune deficiencies Desa Lilic Show preview | PDF (327 K) | Related articles | Related reference work articles Highlights ► Patients with primary immune deficiencies have contributed enormously to our understanding of immunological pathways mediating immunity to fungi. ► Defects in PID patients demonstrate that mutually exclusive pathways underlie immunity to different types of fungal pathogens and infections. ► Immunity to mucocutaneous infection is critically dependent on Th-17 responses while phagocytes confer protection against invasive disease.

Recent progress in vaccines against fungal diseases Antonio Cassone, Arturo Casadevall Show preview | PDF (362 K) | Related articles | Related reference work articles Highlights ► We review recent progress in fungal vaccine development. ► The climate for fungal vaccine development is increasingly favorable. ► Two vaccines against fungal diseases are in clinical trials. ► Experimental work suggests that it may be possible to generate fungal vaccines against several important pathogens.

Immunotherapy for fungal infections Darius Armstrong-James, Thomas S Harrison Show preview | PDF (262 K) | Related articles | Related reference work articles

Systems biology of host–fungus interactions: turning complexity into simplicity Lanay Tierney, Karl Kuchler, Lisa Rizzetto, Duccio Cavalieri Show preview | PDF (543 K) | Related articles | Related reference work articles Open Access Article Highlights ► Understanding the complexity of host–fungus interactions during commensalism. ► Genes mediating host colonization or fitness can evolve into infection-associated traits. ► Using bioinformatics to unravel functional genomics in dual-genome datasets. ► Modeling Aquaculture Journals Page: 165 of 331

Aquaculture Journals – Table of Contents

both fungal and host immune responses using network analysis tools. ► Databases and web- based resources for investigating host–pathogen interactions.

Host--microbe interactions: parasites Edited by Hugo Lujan

Trying to get rid of protozoan parasites Hugo D Lujan Show preview | PDF (151 K) | Related articles | Related reference work articles

The moving junction, a key portal to host cell invasion by apicomplexan parasites Bang Shen, L David Sibley Show preview | PDF (526 K) | Related articles | Related reference work articles Highlights ► Apicomplexan parasites actively invade their host cell using actin-based motility. ► Host cell attachment is mediated by proteins secreted from the apical complex. ► Rhoptry neck (RON) proteins are inserted into the host cell membrane. ► The parasite cell surface protein AMA1 binds to RON2 to form a tight junction. ► Migration of the parasite past this ‘moving junction’ results in cell entry.

Antigenic variation and the generation of diversity in malaria parasites Laura A Kirkman, Kirk W Deitsch Show preview | PDF (422 K) | Related articles | Related reference work articles Highlights ► Antigenic variation enables parasites to avoid the antibody response of their host. ► The multi-copy var gene family of P. falciparum encodes variant surface antigens. ► Control of var gene expression depends on modifications to chromatin structure. ► Recombination between var genes leads to extensive sequence diversity. ► Chromatin structure and DSB repair likely contribute to var gene diversification.

Form and function in the trypanosomal secretory pathway Jason S Silverman, James D Bangs Show preview | PDF (982 K) | Related articles | Related reference work articles Highlights ► The trypanosome secretory pathway is streamlined for efficient transport. ► GPI anchors influence selective transport in both early and post-Golgi compartments. ► ER exit sites and associated Golgi nucleate on unique flagellar cytoskeletal elements. ► A novel bilobe structure plays multiple roles in cytoskeletal and organellar replication. ► Unusual pathways of biosynthetic trafficking to the lysosome exist.

Entamoeba histolytica: a snapshot of current research and methods for genetic analysis Laura Morf, Upinder Singh Show preview | PDF (651 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 166 of 331

Aquaculture Journals – Table of Contents

► Entamoeba histolytica is an important human pathogen. ► Recent important research findings are summarized in this article. ► A review of cell biological and molecular tools available is reviewed.

Making an anti-amastigote vaccine for visceral leishmaniasis: rational, update and perspectives Ana Paula Fernandes, Eduardo Antonio Ferraz Coelho, George Luiz Lins Machado-Coelho, Gabriel Grimaldi Junior, Ricardo Tostes Gazzinelli Show preview | PDF (629 K) | Related articles | Related reference work articles Highlights ► Main correlates of immune responses and protective immunity in visceral leishmaniasis are summarized. ► The rational for development of a vaccine targeting the intracellular stage of Leishmania parasites is discussed. ► Presents the main advances towards development of anti-amastigote A2 antigen based vaccines for visceral leishmaniasis. ► Reports on the efforts to identify by immuproteomics new amastigote antigens for vaccine development.

Host--microbe interactions: viruses Edited by Marco Vignuzzi

Viruses: foe, freeloader or friend? Marco Vignuzzi Show preview | PDF (196 K) | Related articles | Related reference work articles

Gulping rather than sipping: macropinocytosis as a way of virus entry Jason Mercer, Ari Helenius Show preview | PDF (1882 K) | Related articles | Related reference work articles Highlights ► Over 20 different viruses use macropinocytosis as a means to enter host cells. ► Viruses can trigger macropinocytosis using a wide variety of cell surface molecules. ► Macropinocytic signaling varies with the triggering virus. ► Apoptotic mimicry is emerging as a common mechanism used by viruses to trigger macropinocytosis. ► Viruses are becoming valuable tools to study macropinocytosis.

Inhibition and avoidance of mRNA degradation by RNA viruses Stephanie L Moon, Michael D Barnhart, Jeffrey Wilusz Show preview | PDF (655 K) | Related articles | Related reference work articles Highlights ► Numerous factors and pathways are used by the cellular RNA decay machinery to regulate transcript stability. ► The cellular RNA decay machinery has a significant influence on viral gene expression in infected cells. ► Strategies used by RNA viruses to avoid the cellular RNA decay machinery include degrading/inactivating key components, recruiting cellular stability factors and evolution of nuclease resistant RNA structures. ► Instead of simply avoiding it, RNA viruses may also use the cellular RNA decay machinery to increase or fine tune their gene expression.

Diverse virus–host interactions influence RNA-based regulation during γ- herpesvirus infection Lisa M Kronstad, Britt A Glaunsinger

Aquaculture Journals Page: 167 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (630 K) | Related articles | Related reference work articles Highlights ► Viral microRNAs engage atypical host ribonucleases for their nuclear biogenesis. ► Lytic γ-herpesvirus infection drives global mRNA depletion and inhibits RNA export. ► The KSHV PAN RNA is stabilized by protein binding and an intramolecular RNA clamp.

Lipids at the interface of virus–host interactions Vineela Chukkapalli, Nicholas S Heaton, Glenn Randall Show preview | PDF (424 K) | Related articles | Related reference work articles Highlights ► Viruses physically remodel the cell by manipulating lipid signaling and synthesis. ► Viruses manipulate cellular lipid metabolism to facilitate replication and assembly. ► Lipid synthesis is emerging as a target of intrinsic and innate antiviral immunity.

Role of host reticulon proteins in rearranging membranes for positive-strand RNA virus replication Arturo Diaz, Paul Ahlquist Show preview | PDF (463 K) | Related articles | Related reference work articles Highlights ► The reticulon family is involved in shaping and bending the endoplasmic reticulum. ► Reticulons interact with proteins of several positive-strand RNA viruses. ► Reticulons are involved in forming the replication compartments of brome mosaic virus. ► We hypothesize on the role of reticulons in forming the replication compartments of other RNA viruses.

Viral population dynamics and virulence thresholds Karen Z Lancaster, Julie K Pfeiffer Show preview | PDF (469 K) | Related articles | Related reference work articles Highlights ► RNA viruses exist as dynamic populations of related genomes. ► Viral population dynamics and host barriers influence virulence thresholds. ► Understanding virulence thresholds may aid disease prediction.

Living with the enemy: viral persistent infections from a friendly viewpoint Bertsy Goic, Maria-Carla Saleh Show preview | PDF (476 K) | Related articles | Related reference work articles Highlights ► Persistence state is a metastable equilibrium between host and pathogen. ► Viral persistence is a widespread phenomenon through all kingdoms. ► Persistent infections can benefit the virus and/or the host at the population level. ► The root of viral persistence could be at the ‘endogenization’ of viral sequences.

Backseat drivers: the hidden influence of microbial viruses on disease Mary-Anne Hartley, Catherine Ronet, Nicolas Fasel Show preview | PDF (1302 K) | Related articles | Related reference work articles Graphical abstract

Aquaculture Journals Page: 168 of 331

Aquaculture Journals – Table of Contents

Highlights ► Viruses parasitising human pathogens contribute virulence to achieve symbiosis. ► We call this relationship ‘hyperpathogenism’ and present its wide clinical potential. ► We review its impact on human disease, using Leishmania RNA virus as an example. ► We discuss conditions of the evolutionary sanctuaries breeding hyperpathogenism. ► Concluding its importance as a target for diagnostic and therapeutic intervention.

The complexity of virus systems: the case of endosymbionts Jason A Metcalf, Seth R Bordenstein Show preview | PDF (1171 K) | Related articles | Related reference work articles Highlights ► Viruses are abundant in many endosymbionts despite their intracellular niche. ► WO, a phage of Wolbachia, is one of the most widespread endosymbiont viruses. ► The Modular Theory of phage genome evolution does not apply to WO. ► WO forms a tripartite symbiotic relationship between arthropods, bacteria, and viruses. ► WO has potential as a vector for Wolbachia transformation and in therapeutics.

Previous – Top – Next

Aquaculture Journals Page: 169 of 331

Aquaculture Journals – Table of Contents

DDDiiissseeeaaassseeesss ooofff AAAqqquuuaaatttiiiccc OOOrrrgggaaannniiisssmmmsss

VOLUME 99, PART 2, JUNE 2012 Website

Research articles

Fournie JW, Vivian DN, Yee SH, Courtney LA, Barron MG Comparative sensitivity of six scleractinian corals to temperature and solar radiation | Full text in pdf format

Angermeier H, Glöckner V, Pawlik JR, Lindquist NL, Hentschel U Sponge white patch disease affecting the Caribbean sponge Amphimedon compressa | Full text in pdf format

Greeff MR, Christison KW, Macey BM Development and preliminary evaluation of a real-time PCR assay for Halioticida noduliformans in abalone tissues | Full text in pdf format

Webb R, Philips A, Speare R, Connolly J, Berger L Controlling fungal disease spread: in vitro efficacy of disinfectants against Batrachochytrium dendrobatidis and Mucor amphibiorum | Full text in pdf format

Ault KK, Johnson JE, Pinkart HC, Wagner RS Genetic comparison of water molds from embryos of amphibians Rana cascadae, Bufo boreas and Pseudacris regilla | Full text in pdf format

Gregg JL, Grady CA, Friedman CS, Hershberger PK Inability to demonstrate fish-to-fish transmission of Ichthyophonus from laboratory infected Pacific herring Clupea pallasii to naïve conspecifics | Full text in pdf format

Lago EP, Nieto TP, Farto R Virulence factors of subsp. salmonicida strains associated with infections in turbot Psetta maxima Full text in pdf format

Hoa TTT, Zwart MP, Phuong NT, Oanh DTH, de Jong MCM, Vlak JM Indel-II region deletion sizes in the white spot syndrome virus genome correlate with shrimp disease outbreaks in southern Vietnam | Full text in pdf format

NOTE

Bateman KS, White P, Longshaw M Virus-like particles associated with mortalities of the Manila clam Ruditapes philippinarum in England | Full text in pdf format

Previous – Top – Next

Aquaculture Journals Page: 170 of 331

Aquaculture Journals – Table of Contents

VOLUME 99, PART 3, JULY 2012 Website

Research articles

Weir RP, Moody NJG, Hyatt AD, Crameri S, Voysey R, Pallister J, Jerrett IV Isolation and characterisation of a novel Bohle-like virus from two frog species in the Darwin rural area, Australia | Full text in pdf format

Tang KFJ, Navarro SA, Pantoja CR, Aranguren FL, Lightner DV New genotypes of white spot syndrome virus (WSSV) and Taura syndrome virus (TSV) from the Kingdom of Saudi Arabia | Full text in pdf format

Immanuel G, Sivagnanavelmurugan M, Balasubramanian V, Palavesam A Sodium alginate from Sargassum wightii retards mortalities in Penaeus monodon postlarvae challenged with white spot syndrome virus | Full text in pdf format

Longyant S, Senapin S, Sanont S, Wangman P, Chaivisuthangkura P, Rukpratanporn S, Sithigorngul P Monoclonal antibodies against extra small virus show that it co-localizes with Macrobrachium rosenbergii nodavirus Full text in pdf format

Liu Y, Zhou Z, Wu N, Tao Y, Xu L, Cao Y, Zhang Y, Yao B Gibel carp Carassius auratus gut microbiota after oral administration of trimethoprim/ sulfamethoxazole Full text in pdf format

Umeda K, Yoshinaga T Development of real-time PCR assays for discrimination and quantification of two Perkinsus spp. in the Manila clam Ruditapes philippinarum Full text in pdf format

Gračan R, Buršić M, Mladineo I, Kučinić M, Lazar B, Lacković G Gastrointestinal helminth community of loggerhead sea turtle Caretta caretta in the Adriatic Sea Full text in pdf format

Venn-Watson S, Daniels R, Smith C Thirty year retrospective evaluation of pneumonia in a bottlenose dolphin Tursiops truncatus population Full text in pdf format

NOTE

Jones MEB, Paddock D, Bender L, Allen JL, Schrenzel MS, Pessier AP Treatment of chytridiomycosis with reduced-dose itraconazole Full text in pdf format

Previous – Top – Next

Aquaculture Journals Page: 171 of 331

Aquaculture Journals – Table of Contents

VOLUME 100, PART 1, AUGUST 2012 Website

Research articles

Saleh M, Soliman H, Schachner O, El-Matbouli M Direct detection of unamplified spring viraemia of carp virus RNA using unmodified gold nanoparticles Full text in pdf format

Yuasa K, Kurita J, Kawana M, Kiryu I, Ohseko N, Sano M Development of mRNA-specific RT-PCR for the detection of koi herpesvirus (KHV) replication stage Full text in pdf format

Sheng XZ, Wang M, Xing J, Zhan WB Monoclonal antibodies against 27.8 kDa protein receptor efficiently block lymphocystis disease virus infection in flounder Paralichthys olivaceus gill cells Full text in pdf format

Estensoro I, Redondo MJ, Salesa B, Kaushik S, Pérez-Sánchez J, Sitjà-Bobadilla A Effect of nutrition and Enteromyxum leei infection on gilthead sea bream Sparus aurata intestinal carbohydrate distribution Full text in pdf format

Katahira H, Mizuno K, Umino T, Nagasawa K Influence of host habitat on the occurrence of gill monogeneans Pseudodactylogyrus spp. on wild Japanese eels Anguilla japonica Full text in pdf format

Forwood JM, Harris JO, Deveney MR Host impact of monogenean Lepidotrema bidyana infection and intensity estimates for onsite monitoring Full text in pdf format

Kusterle S, Kristoffersen R, Rikardsen AH Population dynamics of Salmincola salmoneus on Atlantic salmon in a northern Norwegian river Full text in pdf format

Poppi L, Zaccaroni A, Pasotto D, Dotto G, Marcer F, Scaravelli D, Mazzariol S Post-mortem investigations on a leatherback turtle Dermochelys coriacea stranded along the Northern Adriatic coastline Full text in pdf format

NOTES

Arias CR, Cai W, Peatman E, Bullard SA Catfish hybrid Ictalurus punctatus × I. furcatus exhibits higher resistance to disease than the parental species Full text in pdf format

Tien NT, Dung TT, Tuan NT, Crumlish M First identification of Flavobacterium columnare infection in farmed freshwater striped catfish Pangasianodon hypophthalmus Full text in pdf format Aquaculture Journals Page: 172 of 331

Aquaculture Journals – Table of Contents

Previous – Top – Next

VOLUME 100, PART 2, 2012 Website

Research articles

DAO SPECIAL 6: Disease effects on lobster fisheries, ecology, and culture

Lobsters are valued globally for their functions as integral members of benthic ecosystems and prized seafood commodities. They are not fraught with many epizootic diseases in the wild, but there are several pathogens which have exacted high mortalities including epizootic shell disease in the American lobster, Panulirus argus Virus 1 in the Caribbean spiny lobster, and Hematodinium sp. in the Norway lobster. However, as with other decapods, culture and holding facilities have seen the rise of several others, including gaffkemia and bumper car disease. The special session and workshop on disease at the 2011 International Conference and Workshop on Lobster Biology and Management in Bergen, Norway highlighted the current state of knowledge regarding many of these pathogens. The papers in this special edition of DAO focus on the role of disease in fisheries, ecology, and culture, and discuss some of the potential ways forward in managing disease.

Publication date: August 27, 2012 Editors: Don Behringer, Mark Butler, Grant Stentiford

Behringer DC, Butler MJ IV, Stentiford GD INTRODUCTION: Disease effects on lobster fisheries, ecology, and culture: overview of DAO Special 6 Full text in pdf format

Beevers ND, Kilbride E, Atkinson RJA, Neil DM Hematodinium infection seasonality in the Firth of Clyde (Scotland) Nephrops norvegicus population: a re-evaluation Full text in pdf format

Albalat A, Gornik SG, Beevers N, Atkinson RJA, Miskin D, Neil DM Hematodinium sp. infection in Norway lobster Nephrops norvegicus and its effects on meat quality Full text in pdf format

Pascual Jiménez C, Huchin-Mian JP, Simões N, Briones-Fourzán P, Lozano-Álvarez E, Sánchez Arteaga A, Pérez-Vega JA, Simá-Álvarez R, Rosas Vazquez C, Rodríguez-Canul R Physiological and immunological characterization of Caribbean spiny lobsters Panulirus argus naturally infected with Panulirus argus Virus 1 (PaV1) Full text in pdf format

Candia-Zulbarán RI, Briones-Fourzán P, Negrete-Soto F, Barradas Barradas-Ortiz C, Lozano-Álvarez E Variability in clinical prevalence of PaV1 in Caribbean spiny lobsters occupying commercial casitas over a large bay in Mexico Full text in pdf format

Aquaculture Journals Page: 173 of 331

Aquaculture Journals – Table of Contents

Briones-Fourzán P, Candia-Zulbarán RI, Negrete-Soto F, Barradas-Ortiz C, Huchin-Mian JP, Lozano-Álvarez E Influence of local habitat features on disease avoidance by Caribbean spiny lobsters in a casita-enhanced bay Full text in pdf format

Castro KM, Cobb JS, Gomez-Chiarri M, Tlusty M Epizootic shell disease in American lobsters Homarus americanus in southern New England: past, present and future Full text in pdf format

Stebbing PD, Pond MJ, Peeler E, Small HJ, Greenwood SJ, Verner-Jeffreys D Limited prevalance of gaffkaemia (Aerococcus viridans var. homari) isolated from wild-caught European lobsters Homarus gammarus in England and Wales Full text in pdf format

Bateman KS, Munro J, Uglow B, Small HJ, Stentiford GD Susceptibility of juvenile European lobster Homarus gammarus to shrimp products infected with high and low doses of white spot syndrome virus Full text in pdf format

Stentiford GD Histological intersex (ovotestis) in the European lobster Homarus gammarus and a commentary on its potential mechanistic basis Full text in pdf format

Previous – Top – Next

Aquaculture Journals Page: 174 of 331

Aquaculture Journals – Table of Contents

FFFiiissshhh &&& SSShhheeellllllfffiiissshhh IIImmmmmmuuunnnooolllooogggyyy

VOLUME 33, PART 1, JULY 2012 Website

Research articles

Characterization of two isoforms of antiliopolysacchride factors (Sp-ALFs) from the mud crab Scylla paramamosain Hai-peng Liu, Rong-yuan Chen, Qiu-xia Zhang, Qiao-yang Wang, Cong-ru Li, Hui Peng, Ling Cai, Chao-qun Zheng, Ke-jian Wang Show preview | PDF (1497 K) | Related articles | Related reference work articles Highlights ► Cloning, characterization and recombinant expression of two isoforms of antilipopolysaccharide factors from mud crab. ► Recombinant proteins and synthesized peptides of Sp-ALFs inhibited the growth of Gram-positive and Gram-negative bacteria. ► Sp-ALFs affected the Escherichia coli (mc1061) without the disruption of the bacterial membrane. ► Sp-ALFs interfered with WSSV propagation in crayfish haemotopoietic tissue cell cultures.

Identification of an amphioxus intelectin homolog that preferably agglutinates gram-positive over gram-negative bacteria likely due to different binding capacity to LPS and PGN Jie Yan, Jianfeng Wang, Yaqi Zhao, Jingye Zhang, Changcun Bai, Changqing Zhang, Chao Zhang, Kailin Li, Haiqing Zhang, Xiumin Du, Lijun Feng Show preview | PDF (1517 K) | Related articles | Related reference work articles Highlights ► One homolog of intelectin named AmphiITLN-like was identified in amphioxus. ► AmphiITLN-like transcripts were mainly expressed in digestive tract. ► The up-regulation of AmphiITLN-like occurred within 2–8 h after bacteria challenge. ► Recombinant AmphiITLN-like recognized PGN, LPS and induced bacterial agglutination. ► AmphiITLN- like recognizing PGN/Staphylococcus aureus more intensely than LPS/Escherichia coli was found.

A vaccine based on biodegradable microspheres induces protective immunity against scuticociliatosis without producing side effects in turbot L. León-Rodríguez, A. Luzardo-Álvarez, J. Blanco-Méndez, J. Lamas, J. Leiro Show preview | PDF (444 K) | Related articles | Related reference work articles Highlights ► A microparticle vaccine containing antigens of P. dicentrarchi was constructed. ► Formulated microparticles enhanced the specific humoral immune responses in turbot. ► Polymeric microparticles show a high adjuvant capacity in turbot. ► Fish immunized with vaccine containing microparticles showed increased survival time. ► Vaccination with microparticles cannot affect the growth of fishes.

Molecular characterization, immune responses and DNA protection activity of rock bream (Oplegnathus fasciatus), 6 (Prx6) Mahanama De Zoysa, Jae-Ho Ryu, Hee-Chung Chung, Cheol-Hee Kim, Chamilani Nikapitiya, Chulhong Oh, Hyowon Kim, K. Saranya Revathy, Ilson Whang, Jehee Lee

Aquaculture Journals Page: 175 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (2088 K) | Related articles | Related reference work articles Highlights ► Prx6 is a potent cytoprotective enzyme for minimizing oxidative stress. ► Immune challenge stimulates the transcription of Prx6 in rock bream. ► Recombinant Prx6 can protect DNA from the damages induced by metal-catalyzed generation of ROS.

Immune responses of zebrafish (Danio rerio) induced by bath-vaccination with a live attenuated Vibrio anguillarum vaccine candidate Zhihui Zhang, Haizhen Wu, Jingfan Xiao, Qiyao Wang, Qin Liu, Yuanxing Zhang Show preview | PDF (460 K) | Related articles | Related reference work articles Highlights ► The zebrafish was well protected after bath-vaccination with Vibrio anguillarum MVAV6203, a live attenuated vaccine candidate. ► The specific antibody was trigged in 1 month after vaccination, which can be associated with significant protection. ► Some immune-relevant genes expressions were found being up-regulated post-vaccination in zebrafish.

Overexpression of Hsp90 from grass carp (Ctenopharyngodon idella) increases thermal protection against heat stress Chu-Xin Wu, Feng-Yun Zhao, Yuan Zhang, Yu-Jiao Zhu, Mei-Sheng Ma, Hui-Ling Mao, Cheng-Yu Hu Show preview | PDF (822 K) | Related articles | Related reference work articles Highlights ► CiHsp90 was up-regulated after temperature stress in all detected tissues. ► CiHsp90 could contribute to protecting cells against both thermal and cold extremes. ► The full- length CiHsp90 was required for its protection activity. ► CiHsp90 reduce the level of citrate synthase aggregation at high temperature. ► ▵N-CiHsp90 reduce the level of citrate synthase aggregation at high temperature.

Molecular and functional characterization of HdHSP20: A biomarker of environmental stresses in disk abalone Haliotis discus discus Qiang Wan, Ilson Whang, Jehee Lee Show preview | PDF (2012 K) | Related articles | Related reference work articles Highlights ► The complete cDNA sequence, genomic structure and promoter region of HdHSP20 were determined. ► Overexpression of recombinant HdHSP20 protein can protect Escherichia coli cells from heat injury. ► The expression of HdHSP20 is strongly inducible by various environmental stresses. ► HdHSP20 is involved in stress defense system in abalone and are able to sensitively indicate environmental stresses.

The effect of triploidy and vaccination on neutrophils and B-cells in the peripheral blood and head kidney of 0+ and 1+ Atlantic salmon (Salmo salar L.) post-smolts Thomas W.K. Fraser, Anita Rønneseth, Gyri T. Haugland, Per Gunnar Fjelldal, Ian Mayer, Heidrun I. Wergeland Show preview | PDF (320 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 176 of 331

Aquaculture Journals – Table of Contents

► Neutrophil and B-cells proportions in blood and head kidney of Atlantic salmon. ► Investigated changes due to ploidy, vaccination, and smolting regime (0+ and 1+). ► Generally lower values in both leucocyte proportions in 0+ compared to 1+ fish. ► Triploidy affected B-cells (lower values) more than neutrophils. ► Vaccination interacted with ploidy in 0+ fish, and increased B-cell proportions in 1+ fish.

The expression of dopa decarboxylase and dopamine beta hydroxylase and their responding to bacterial challenge during the ontogenesis of scallop Chlamys farreri Zhi Zhou, Lingling Wang, Xiaowei Shi, Feng Yue, Mengqiang Wang, Huan Zhang, Linsheng Song Show preview | PDF (1030 K) | Related articles | Related reference work articles Highlights ► DDC and DBH were detectable during the early developmental of scallop larvae. ► Scallop catecholaminergic nervous system developed initially in the trochophore stage. ► Scallop catecholaminergic nervous system could be activated by immune stimulation in the scallop larvae.

Molecular identification and expression analysis of two distinct BPI/LBPs (bactericidal permeability-increasing protein/LPS-binding protein) from rock bream, Oplegnathus fasciatus Ju-Won Kim, Lena Gerwick, Chan-Il Park Show preview | PDF (3945 K) | Related articles | Related reference work articles Highlights ► The BPI/LBP-1 and BPI/LBP-2 cDNAs in rock bream were identified. ► RbBPI/LBP-1 mRNA was predominately expressed in the spleen, liver, intestine and gill. ► RbBPI/LBP-2 mRNA was predominately expressed in the kidney, PBLs, and spleen. ► RbBPI/LBP-1 and RbBPI/LBP-2 were upregulated in the bacterial and viral infection.

Molecular cloning, expression pattern and antimicrobial activity of a new isoform of anti-lipopolysaccharide factor from the swimming crab Portunus trituberculatus Yuan Liu, Zhaoxia Cui, Xihong Li, Chengwen Song, Qianqian Li, Shuangyan Wang Show preview | PDF (1486 K) | Related articles | Related reference work articles Highlights ► A new ALF isoform (PtALF5) from Portunus trituberculatus was cloned. ► PtALF5 shared lower amino acid similarity with the reported ALFs. ► PtALF5 transcript was predominantly expressed in the hemocytes. ► The recombinant PtALF5 showed antimicrobial activity against Gram-negative bacteria.

Purification and characterization of an antimicrobial histone H1-like protein and its gene from the testes of olive flounder, Paralichthys olivaceus Bo-Hye Nam, Jung-Kil Seo, Hye-Jin Go, Min Jeong Lee, Young-Ok Kim, Dong-Gyun Kim, Sang-Jun Lee, Nam Gyu Park Show preview | PDF (982 K) | Related articles | Related reference work articles Highlights ► A histone H1-like protein was isolated from an acidified testis extract of olive flounder. ► This protein showed potent antimicrobial activity against Gram-positive and Gram- negative bacteria, and Candida albicans. ► The mRNA was constitutively expressed in testis

Aquaculture Journals Page: 177 of 331

Aquaculture Journals – Table of Contents

and ovary. ► The mRNA expression level was significantly dependent on developmental stage.

Caspase 3 from rock bream (Oplegnathus fasciatus): Genomic characterization and transcriptional profiling upon bacterial and viral inductions Don Anushka Sandaruwan Elvitigala, Ilson Whang, H.K.A. Premachandra, Navaneethaiyer Umasuthan, Myung-Joo Oh, Sung-Ju Jung, Sang-Yeob Yeo, Bong-Soo Lim, Jeong-Ho Lee, Hae-Chul Park, Jehee Lee Show preview | PDF (2462 K) | Related articles | Related reference work articles Highlights ► Rock bream caspase 3 (Rbcasp3) was structurally and functionally characterized. ► Upon immune challenges Rbcasp3 showed significant transcriptional up-regulations. ► Genomic structure and promoter of Rbcasp3 was predicted. ► Recombinant Rbcasp3 exhibited a detectable cysteine-aspartic specific protease activity.

Immunomodulatory effects of dietary β-1,3-glucan from Euglena gracilis in rainbow trout (Oncorhynchus mykiss) immersion vaccinated against Yersinia ruckeri Jakob Skov, Per Walter Kania, Lars Holten-Andersen, Belén Fouz, Kurt Buchmann Show preview | PDF (621 K) | Related articles | Related reference work articles Highlights ► Effect of dietary β-1,3-glucan on vaccine efficacy was tested in rainbow trout. ► β- Glucan significantly affected gene (e.g. SAA) expression in vaccinated fish only. ► A trend towards increased plasma lysozyme activity observed in β-glucan fed fish. ► A trend towards suppression of plasma antibody levels observed in β-glucan fed fish. ► Irrespective of vaccination status, β-glucan had no effect on survival post-infection.

Immunological role of thiol-dependent peroxiredoxin gene in Macrobrachium rosenbergii Jesu Arockiaraj, Sarasvathi Easwvaran, Puganeshwaran Vanaraja, Arun Singh, Rofina Yasmin Othman, Subha Bhassu Show preview | PDF (1249 K) | Related articles | Related reference work articles Highlights ► An antioxidant MrPrdx gene from Macrobrachium rosenbergii has been identified. ► MrPrdx has been characterized at molecular level. ► MrPrdx contains a thioredoxin domain along with the signature motifs. ► Gene expression was stimulated with virus and is up- regulated in gills. ► A peroxidise activity assays were conducted using recombinant MrPrdx protein.

Short Communications

Immune activation is inversely related to, but does not cause variation in androgen levels in a cichlid fish species Albert F.H. Ros, Rui F. Oliveira, Peter D. Dijkstra, Ton G.G. Groothuis Show preview | PDF (272 K) | Related articles | Related reference work articles Highlights ► The effect of immune activation on androgens was tested in the St. Petersfish. ► Immune activation by SRBC immunization did not affect blood levels of androgens. ► Antibody

Aquaculture Journals Page: 178 of 331

Aquaculture Journals – Table of Contents

responses were inversely related with changes in androgen levels. ► High activity of the HPG axis (androgen production) is incompatible with mounting antibody responses.

A new type of Kazal proteinase inhibitor related to shrimp Penaeus (Litopenaeus) vannamei immunity Francisco Vargas-Albores, Enrique Villalpando Show preview | PDF (435 K) | Related articles | Related reference work articles Highlights ► A new Kazal proteinase inhibitor is described in shrimp. ► Domain architecture is different to any described penaeid Kazal. ► Different expression profile to the previously described shrimp Kazal.

Gender differences in hemocyte immune parameters of bivalves: The Sydney rock oyster Saccostrea glomerata and the pearl oyster Pinctada fucata Cécile Dang, Terence Tan, Dylan Moffit, Jérome Delamare Deboutteville, Andrew C. Barnes Show preview | PDF (319 K) | Related articles | Related reference work articles Highlights ► Hemocyte characteristics were different between gender of two marine bivalves. ► No impact of gender on total and differential hemocytes counts. ► No impact of gender on phagocytosis. ► Intracellular oxidative metabolism higher in males than females for both species. ► Gender contribute to inter-individual variability in hemocytes immune parameters.

Effect of berberine hydrochloride on grass carp Ctenopharyngodon idella serum bactericidal activity against Edwardsiella ictaluri Cheng Ji, De Feng Zhang, Ai Hua Li, Xiao Ning Gong Show preview | PDF (168 K) | Related articles | Related reference work articles Highlights ► Bactericidal activity of grass carp serum was significantly enhanced when pre-treated with berberine hydrochloride. ► The complement consumption experiment demonstrated that berberine hydrochloride can activate fish complement system. ► Berberine hydrochloride has potential in the prevention or treatment of fish diseases.

BIRC7 gene in channel catfish (Ictalurus punctatus): Identification and expression analysis in response to Edwardsiella tarda, Streptococcus iniae and channel catfish Hemorrhage Reovirus Min Li, Yang Liu, Qi-Long Wang, Song-Lin Chen, Zhen-Xia Sha Show preview | PDF (1639 K) | Related articles | Related reference work articles Highlights ► Full length cDNA of channel catfish BIRC7 (CcBIRC7) was 1686 bp. ► The putative CcBIRC7 protein contains two BIR domains and a RING finger motif. ► CcBIRC7 was widely expressed in various tissues. ► CcBIRC7 expression was induced stronger by bacteria than by virus in immune tissues. ► This is the first report of BIRC7 gene identification and its expression in fish.

Previous – Top – Next

Aquaculture Journals Page: 179 of 331

Aquaculture Journals – Table of Contents

VOLUME 33, PART 2, AUGUST 2012 Website

Research articles

Immune response of four dual-CRD C-type lectins to microbial challenges in giant freshwater prawn Macrobrachium rosenbergii Qian Ren, Meng Li, Jie Du, Chi-Yu Zhang, Wen Wang Show preview | PDF (3546 K) | Related articles | Related reference work articles Highlights ► Four dual-CRD C-type lectins from Macrobrachium rosenbergii were identified. ► Positive selection of lectins may confer their ability to recognize diverse microbes. ► The expression of four lectins showed diverse responses to microbe challenge.

The effect of adjuvant and microbial challenge on the expression of antimicrobial polypeptides in channel catfish (Ictalurus punctatus) Eman Zahran, Jung-Kil Seo, Edward J. Noga Show preview | PDF (156 K) | Related articles | Related reference work articles Highlights ► Parenteral immunostimulant administration upregulates a suite of antimicrobial polypeptides (AMPPs) in skin. ► Histone-like protein (HLP) and compounds active against Edwardsiella ictaluri are upregulated. ► The AMPPs are upregulated to microbicidal levels. ► These upregulated AMPPs may provide a useful proactive protection strategy.

Oral immunization of rainbow trout to infectious pancreatic necrosis virus (Ipnv) induces different immune gene expression profiles in head kidney and pyloric ceca Natalia A. Ballesteros, Sylvia S. Rodriguez Saint-Jean, Paloma A. Encinas, Sara I. Perez-Prieto, Julio M. Coll Show preview | PDF (664 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Transcriptomes of rainbow trout organs are described after oral vaccination. ► Our own designed oligo microarray enriched in immune-related genes was used. ► More yet- undescribed genes increased in head kidney than in pyloric ceca. ► Pyloric ceca showed more decreased transcripts than head kidney. ► New gene markers can be used to improve fish oral vaccination.

Molecular cloning and characterization of c-type lysozyme gene in orange- spotted grouper, Epinephelus coioides Shina Wei, Youhua Huang, Jia Cai, Xiaohong Huang, Jing Fu, Qiwei Qin Show preview | PDF (1642 K) | Related articles | Related reference work articles Highlights ► c-type lysozyme gene from Epinephelus coioides (Ec-lysC) was identified and characterized. ► The expression of Ec-lysC in response to LPS, SGIV and Vibrio alginolyticus were different. ► The recombinant Ec-lysC had lytic activities against Gram- positive bacteria and Gram-negative bacteria. ► Ec-lysC overexpression decreased SGIV replication in grouper cells.

Recombinant interferon-γ activates immune responses against Edwardsiella tarda infection in the olive flounder, Paralichthys olivaceus

Aquaculture Journals Page: 180 of 331

Aquaculture Journals – Table of Contents

Chan Yong Jung, Jun-ichi Hikima, Maki Ohtani, Ho Bin Jang, Carmelo S. del Castillo, Seong Won Nho, In Seok Cha, Seong Bin Park, Takashi Aoki, Tae Sung Jung Show preview | PDF (490 K) | Related articles | Related reference work articles Highlights ► Recombinant interferon gamma (rIFN-γ) was produced using pET system. ► rIFN-γ can induce IL-1β, STAT1, CXCL13, and IFN-γ in kidney leukocytes. ► rIFN-γ can weakly induce IL-1β, TNF-α, CXCL13, and IFN-γ in HINAE cells. ► rIFN-γ can protect fish challenged with Edwardsiella tarda.

Identification and transcriptional analysis of two types of lectins (SgCTL-1 and SgGal-1) from mollusk Solen grandis Xiumei Wei, Jianmin Yang, Xiangquan Liu, Dinglong Yang, Jie Xu, Jinghui Fang, Weijun Wang, Jialong Yang Show preview | PDF (1916 K) | Related articles | Related reference work articles Highlights ► We identified a C-type lectin and a galectin gene from Solen grandis. ► SgCTL-1 and SgGal-1 exhibited different expression patterns in tissues. ► Both SgCTL-1 and SgGal-1 could be induced by PAMPs with different levels. ► SgCTL-1 and SgGal-1 might be involved in pathogens recognition.

Identification and characterization of a hepcidin from half-smooth tongue sole Cynoglossus semilaevis Yanan Wang, Xudong Liu, Liman Ma, Yan Yu, Haiyang Yu, Shafi Mohammed, Guannan Chu, Linlin Mu, Quanqi Zhang Show preview | PDF (911 K) | Related articles | Related reference work articles Highlights ► One hepcidin was identified from half-smooth tongue sole Cynoglossus semilaevis. ► Its genomic organization and expression patterns were also characterized. ► CsHepcidin transcripts decreased remarkably at metamorphic stage during development. ► It was dramatically induced by bacterial infection. ► The potent bactericidal activity of recombinant mature peptide was also demonstrated.

Channel catfish (Ictalurus punctatus) protein disulphide isomerase, PDIA6: Molecular characterization and expression regulated by bacteria and virus inoculation Zhen-Xia Sha, Hong Liu, Qi-Long Wang, Yang Liu, Yang Lu, Min Li, Song-Lin Chen Show preview | PDF (2126 K) | Related articles | Related reference work articles Highlights ► Channel catfish PDIA6 (ccPDIA6), one copy gene, consists of 13 exons and 12 introns. ► ccPDIA6 ORF encoding 439 amino acids with 19 aa signal peptide. ► ccPDIA6 gene was constitutively expressed in various tissues. ► ccPDIA6 expression is changed in immune tissues after bacteria and virus infection.

Insulin-like growth factor binding protein 7, a member of insulin-like growth factor signal pathway, involved in immune response of small abalone Haliotis diversicolor Na Li, Ziping Zhang, Lili Zhang, Shuhong Wang, Zhihua Zou, Guodong Wang, Yilei Wang Show preview | PDF (3008 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 181 of 331

Aquaculture Journals – Table of Contents

Highlights ► A full-length cDNA of saIGFBP7 was cloned and analyzed from Haliotis diversicolor. ► This is the first report of IGFBP7 in aquatic invertebrate. ► The distribution of saIGFBP7 mRNA and protein was studied at molecular and cellular level. ► The expression of saIGFBP7 was up-regulated in hemocytes and gills after bacterial infection. ► saIGFBP7 may play an important role in small abalone immune system.

Mycobacterium bovis BCG vaccine induces non-specific immune responses in Japanese flounder against Nocardia seriolae Goshi Kato, Hidehiro Kondo, Takashi Aoki, Ikuo Hirono Show preview | PDF (522 K) | Related articles | Related reference work articles Highlights ► BCG vaccine provided protection against nocardiosis in fish. ► However, DTH reaction was not highly induced in BCG-vaccinated fish after injection of Nocardia seriolae antigen. ► mRNA level of lysozymes was up-regulated in BCG-vaccinated fish. ► Bacteriolytic activity was increased in BCG-vaccinated fish. ► Lysozymes might play an important role for BCG-induced protection against N. seriolae.

Matrix metalloproteinase 2 of grass carp Ctenopharyngodon idella (CiMMP2) is involved in the immune response against bacterial infection Xiao-Yan Xu, Yu-Bang Shen, Jian-Jun Fu, Feng Liu, Shi-Zhao Guo, Xiao-Meng Yang, Jia-Le Li Show preview | PDF (1019 K) | Related articles | Related reference work articles Highlights ► MMP-2 cDNA from grass carp (CiMMP-2) was isolated and characterized. ► CiMMP-2 protein is structurally conserved among teleosts. ► CiMMP-2 transcription is maternally inherited and constitutively expressed. ► CiMMP-2 gene expression is significantly induced by A. hydrophila challenge.

Subcellular localization and functional characterization of a fish IRF9 from crucian carp Carassius auratus Jun Shi, Yi-Bing Zhang, Ting-Kai Liu, Fan Sun, Jian-Fang Gui Show preview | PDF (1300 K) | Related articles | Related reference work articles Highlights ► We cloned a fish IRF9 orthologue and characterized its subcellular localization for the first time. ► Fish IRF9 exhibits ability to upregulate the expression of ISGs together with STAT2. ► Fish IRF9 is involved in auto-regulation of fish IFN. ► Interferon triggered JAK- STAT signaling pathway is conserved from fish to mammals.

Pathogen recognition and mechanisms in Atlantic cod (Gadus morhua) head kidney cells: Bacteria (LPS) and virus (poly I:C) signals through different pathways and affect distinct genes Elisabeth Holen, Kai Kristoffer Lie, Pedro Araujo, Pål Asgeir Olsvik Show preview | PDF (783 K) | Related articles | Related reference work articles Highlights ► Atlantic cod responds to bacterial and virus infections in distinct ways. ► There is a connection between immune and xenobiotic pathways. ► Leukotrienes are the preferred eicosanoids secreted by cod head kidney cells.

Aquaculture Journals Page: 182 of 331

Aquaculture Journals – Table of Contents

Pigment-producing granulomatous myopathy in Atlantic salmon: A novel inflammatory response Hilde A.S. Larsen, Lars Austbø, Turid Mørkøre, Jim Thorsen, Ivar Hordvik, Uwe Fischer, Emilio Jirillo, Espen Rimstad, Erling O. Koppang Show preview | PDF (1656 K) | Related articles | Related reference work articles Highlights ► Granulomatous inflammation in a vertebrate may occur with melanin synthesis. ► Fish seem to still rely on immune actions of melanin. ► Our findings help enlighten connections between the pigmentary and immune systems. ► The results may broaden our understanding of the phylogenesis of the immune system.

An iodothyronine from Chlamys farreri and its induced mRNA expression after LPS stimulation Tiantian Wu, Xiaowei Shi, Zhi Zhou, Lingling Wang, Mengqiang Wang, Leilei Wang, Mengmeng Huang, Chuanyan Yang, Linsheng Song Show preview | PDF (1493 K) | Related articles | Related reference work articles Highlights ► An (CfDx) from scallop Chlamys farreri. ► The CfDx mRNA transcripts and concentration of T3 increased significantly after LPS stimulation. ► The ratio of T4/T3 rose significantly after the inhibition of CfDx gene. ► CfDx involved in the immunomodulation of scallop via regulating the concentration of T3 and T4.

Molecular characterization of a novel tetraspanin from the oyster, Crassostrea ariakensis: Variation, localization and relationship to oyster host defense Ming Luo, Shigen Ye, Ting Xu, Xinzhong Wu, Ping Yang Show preview | PDF (1836 K) | Related articles | Related reference work articles Highlights ► A novel tetraspanin family member gene, namely Ca-TSP, identified from mollusc oyster. ► Ca-TSP was enriched in granules of hemocytes. ► Ca-TSP has variable transcription profiles, responded to stimulus challenge. ► Recombinant Ca-TSP significantly inhibited the hemocyte aggregation.

Cardiac pathological changes of Atlantic salmon (Salmo salar L.) affected with heart and skeletal muscle inflammation (HSMI) Muhammad Naveed Yousaf, Erling Olaf Koppang, Karsten Skjødt, Bernd Köllner, Ivar Hordvik, Jun Zou, Chris Secombes, Mark D. Powell Show preview | PDF (3150 K) | Related articles | Related reference work articles Highlights ► Inflammatory cells and cell cycle proteins were characterized in the heart of Atlantic salmon affected with heart and skeletal muscle inflammation (HSMI) by immunohistochemistry. ► CD3+ T lymphocytes dominated over CD8 T lymphocytes. ► rt-TNFα antibody identified macrophage-like and eosinophilic granular cells. ► The strong levels of CD3, PCNA and MHC class II+ cells were identified in HSMI hearts. ► Lymphocyte responses dominated the inflammation over granulocytic infiltrates.

Dietary carbohydrate/lipid ratios affect stress, oxidative status and non-specific immune responses of fingerling blunt snout bream, Megalobrama amblycephala Xiang-Fei Li, Wen-Bin Liu, Kang-Le Lu, Wei-Na Xu, Ying Wang

Aquaculture Journals Page: 183 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (217 K) | Related articles | Related reference work articles Highlights ► Dietary CHO:L ratios and immune status of blunt snout bream are tightly linked. ► The best innate immunity was obtained in fish fed a CHO:L ratio of 5.64. ► High lipid caused stress, impaired liver function and immunosuppression of fish. ► High carbohydrate had no negative effects upon stress and non-specific immunity.

Modulation of the innate immune system in white shrimp Litopenaeus vannamei following long-term low salinity exposure Yong-Chin Lin, Jiann-Chu Chen, Chang-Che Li, Wan Zabidii W. Morni, Awangku Shahrir N. A. Suhaili, Yi-Hsuan Kuo, Yu-Hsuan Chang, Li-Li Chen, Wen-Ching Tsui, Yu-Yuan Chen, Chien-Lun Huang Show preview | PDF (835 K) | Related articles | Related reference work articles Highlights ► Immune parameters of white shrimp reared at different salinities were examined. ► Immune parameters of shrimp at 2.5 and 5‰ were lower with longer haemocyte lifespan. ► Expressions of LGBP, peroxinectin, integrin β and α-2 M of shrimp reared at 2.5 and 5‰ were higher. ► Shrimp reared at 2.5 and 5‰ exhibited decreased resistance against Vibrio and WSSV. ► Shrimp modulate innate immunity system to prevent perturbation at low salinities.

Gene expression and characterization of a serine proteinase inhibitor PmSERPIN8 from the black tiger shrimp Penaeus monodon Suphaphon Somnuk, Anchalee Tassanakajon, Vichien Rimphanitchayakit Show preview | PDF (2574 K) | Related articles | Related reference work articles Highlights ► A genomic gene of PmSERPIN8 from Penaeus monodon contains 5 exons separated by 4 introns. ► The PmSERPIN8 gene is highly expressed at nauplius stage and gradually subsided in later stages. ► The PmSERPIN8 gene expression is up-regulated at 24 and 48 h post Vibrio harveyi and YHV injection. ► Hyaline, semigranular and granular hemocytes are able to produce PmSERPIN8. ► The rPmSERPIN8 inhibits the shrimp prophenoloxidase system.

Effects of dietary Bacillus subtilis, Tetraselmis chuii, and Phaeodactylum tricornutum, singularly or in combination, on the immune response and disease resistance of sea bream (Sparus aurata L.) Rebeca Cerezuela, Francisco A. Guardiola, Pilar González, José Meseguer, M. Ángeles Esteban Show preview | PDF (1189 K) | Related articles | Related reference work articles Highlights ► Effects of microalgae and Bacillus subtilis, single or combined, on immune parameters. ► Experimental diets exhibit up-regulating effects on studied activities. ► No significant differences between combination and separate feeding were observed. ► Phaeodactylum tricornutum demonstrated the highest immunostimulant activity.

The role of white spot syndrome virus (WSSV) VP466 protein in shrimp antiviral phagocytosis Ting Ye, Rongrong Zong, Xiaobo Zhang Show preview | PDF (970 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 184 of 331

Aquaculture Journals – Table of Contents

Highlights ► The VP466 protein could bind host Rab6 protein and increase its GTPase activity. ► The viral protein could be employed by host to initiate the host immunity. ► The increase of the Rab6 activity promoted host defense against virus.

Non-specific immune response and disease resistance induced by Siegesbeckia glabrescens against Vibrio parahaemolyticus in Epinephelus bruneus Ramasamy Harikrishnan, Dong-Hwi Kim, Seung-Hyun Hong, Pitchaimuthu Mariappan, Chellam Balasundaram, Moon-Soo Heo Show preview | PDF (298 K) | Related articles | Related reference work articles Highlights ► The serum lysozyme activity enhanced with all diet from weeks 1–4. ► Complement activity enhanced with all enriched diets on weeks 2 and 4. ► ROS was significantly enhanced only with 1.0% and 2.0% diets. ► RNI was significantly enhanced in all diets on weeks 2 and 4. ► MPO production significantly increased with all diet on fourth week.

Cloning and expression analysis of two ROR-γ homologues (ROR-γa1 and ROR- γa2) in rainbow trout Oncorhynchus mykiss Milena M. Monte, Tiehui Wang, Maria M. Costa, Nor Omaima Harun, Chris J. Secombes Show preview | PDF (445 K) | Supplementary content | Related articles | Related reference work articles Highlights ► This report describes the characterisation of ROR-γa1 and -γa2 in rainbow trout. ► Expression analysis revealed a high constitutive expression of ROR-γ in muscle. ► LPS induced ROR-γ expression in trout cell lines. ► Upon viral challenge with VHSV, ROR-γ expression was suppressed. ► ROR-γ expression was induced in vaccinated fish infected with Yersinia ruckeri. The phenoloxidase activity and antibacterial function of a tyrosinase from scallop Chlamys farreri Zhi Zhou, Duojiao Ni, Mengqiang Wang, Lingling Wang, Leilei Wang, Xiaowei Shi, Feng Yue, Rui Liu, Linsheng Song Show preview | PDF (637 K) | Related articles | Related reference work articles Highlights ► Recombinant protein rCfTYR displayed phenoloxidase activity in the present of Cu2+. ► CfTYR transcripts in haemocytes decreased firstly, and then increased after LPS stimulation. ► LPS stimulation induced the CfTYR-mediated phenoloxidase activity in haemolymph. ► CfTYR-mediated phenoloxidase activity could inhibit the growth of Escherichia coli.

Pro- and anti-inflammatory cytokine expression in carp blood and head kidney leukocytes exposed to stress – An in vitro study Anna Rymuszka, Łukasz Adaszek Show preview | PDF (507 K) | Related articles | Related reference work articles Highlights ► The pure toxins (MC-LR and Antx-a) dysregulated the expression of IL-1β and TNF-α. ► An extract containing Antx-a inhibited the expression of cytokines: IL-1β and TNF-α. ► Toxic extract with Antx-a induced the expression of cytokines: IL-10 and TGF-β. ► Higher expression of cytokines have been observed in pronephric cells.

Fish cell cultures as in vitro models of pro-inflammatory responses elicited by immunostimulants

Aquaculture Journals Page: 185 of 331

Aquaculture Journals – Table of Contents

C. Fierro-Castro, L. Barrioluengo, P. López-Fierro, B.E. Razquin, B. Carracedo, A.J. Villena Show preview | PDF (961 K) | Related articles | Related reference work articles Highlights ► We tested the effects of immunostimulants on trout haemopoietic stromal cell lines. ► Rainbow trout pronephric (TPS-2) and splenic (TSS) stromal cell lines were used. ► LPS, levamisole and poly I:C were used as immunostimulants. ► Immunostimulants boosted phagocytosis, ROS – NO production and bactericidal activity. ► Conditioned supernatants from macrophage cultures also stimulated TPS-2 and TSS cells.

Modulation of the IgM gene expression and IgM immunoreactive cell distribution by the nutritional background in gilthead sea bream (Sparus aurata) challenged with Enteromyxum leei (Myxozoa) Itziar Estensoro, Josep A. Calduch-Giner, Sadasivam Kaushik, Jaume Pérez-Sánchez, Ariadna Sitjà-Bobadilla Show preview | PDF (1599 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Effect of Enteromyxum leei infection and vegetable oil (VO) replacement diet in Sparus aurata. ► Study of IgM gene expression and IgM immunoreactive cell distribution. ► Time dependent IgM up-regulation and plasma cell increase in infected intestines. ► Magnification of IgM increased phenotype in VO diet fed fish.

Mutation in promoter region of a serine protease inhibitor confers Perkinsus marinus resistance in the eastern oyster (Crassostrea virginica) Yan He, Haiyang Yu, Zhenmin Bao, Quanqi Zhang, Ximing Guo Show preview | PDF (1078 K) | Related articles | Related reference work articles Highlights ► We sequenced promoter region of serine protease inhibitor cvSI-1 of eastern oyster. ► We found a 25 bp insertion/deletion polymorphism in the promoter region. ► Oysters with the deletion allele survived better under Perkinsus marinus infection. ► Oysters with the deletion had higher cvSI-1 expression under P. marinus challenge. ► We propose promoter mutation confers P. marinus resistance by up-regulating cvSI-1.

Molecular evidence for the involvement of RORα and RORγ in immune response in teleost Linyong Du, Xiao Yang, Lu Yang, Xinyan Wang, Anying Zhang, Hong Zhou Show preview | PDF (2348 K) | Related articles | Related reference work articles Highlights ► We have cloned two paralogues for RORα and RORγ from grass carp. ► Four ROR transcripts exhibited similar expression patterns in the tissues examined. ► PHA but not LPS stimulated RORα and RORγ expression in periphery blood lymphocytes. ► Poly I:C induced RORγ but not RORα expression in periphery blood lymphocytes.

A novel C1qDC protein acting as pattern recognition receptor in scallop Argopecten irradians Leilei Wang, Lingling Wang, Pengfei Kong, Jialong Yang, Huan Zhang, Mengqiang Wang, Zhi Zhou, Limei Qiu, Linsheng Song Show preview | PDF (1489 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 186 of 331

Aquaculture Journals – Table of Contents

► A novel C1qDC protein (AiC1qDC-2) from Argopecten irradians. ► AiC1qDC-2 could bind LPS, PGN, polyI:C, mannan, β-1,3-glucan and Yeast-glucan. ► It displayed agglutinating activity to fungi and bacteria. ► It may function as PRR to recognize various PAMPs in the immune response of scallop.

Short Communications

Characterization of skin ulceration syndrome associated microRNAs in sea cucumber Apostichopus japonicus by deep sequencing Chenghua Li, Weida Feng, Lihua Qiu, Changge Xia, Xiurong Su, Chunhua Jin, Tingting Zhou, Yuan Zeng, Taiwu Li Show preview | PDF (328 K) | Related articles | Related reference work articles Highlights ► Two haemocytes miRNAs libraries were firstly constructed and deep sequenced. ► Forty conserved miRNA and 86 miRNA candidates were identified in the two libraries. ► Mir-31 and mir-2008 were speculated to be involved into SUS outbreak.

A 15 nucleotide deletion mutation in coding region of the RIG-I lowers grass carp (Ctenopharyngodon idella) resistance to grass carp reovirus Quanyuan Wan, Jianguo Su, Lan Wang, Lijun Chen, Xiaohui Chen Show preview | PDF (994 K) | Related articles | Related reference work articles Highlights ► A 15 nucleotide deletion was discovered in coding region of RIG-I gene. ► The deletion mutation causes changes of binding sites and structure. ► The deletion mutation lowers the resistance of grass carp to GCRV.

Expression of complement component C7 and involvement in innate immune responses to bacteria in grass carp Yubang Shen, Junbin Zhang, Xiaoyan Xu, Jianjun Fu, Jiale Li Show preview | PDF (1500 K) | Related articles | Related reference work articles Highlights ► We isolated and characterized complement C7 cDNA and DNA sequences from grass carp. ► C7 transcription was expressed in trunk kidney, liver, head kidney, skin, spleen, heart and intestine. ► C7 gene expression can be induced significantly by Aeromonas hydrophila challenge.

Immunotoxic and cytotoxic effects of atrazine, permethrin and piperonyl butoxide to rainbow trout following in vitro exposure Lesley K. Shelley, Peter S. Ross, Christopher J. Kennedy Show preview | PDF (221 K) | Related articles | Related reference work articles Highlights ► We tested the immunotoxicity of atrazine, permethrin, and piperonyl butoxide. ► Chemical exposure was done in vitro using rainbow trout peripheral blood leukocytes. ► Both lymphocyte proliferation and viability were decreased by 10 μM exposures. ► Atrazine also suppressed proliferation at 1 μM, but viability was unaffected. ► These chemicals caused immunotoxicity and warrant further investigation in vivo.

Previous – Top – Next

Aquaculture Journals Page: 187 of 331

Aquaculture Journals – Table of Contents

VOLUME 33, PART 3, SEPTEMBER 2012 Website

Research articles

Identification, characterization and the interaction of Tollip and IRAK-1 in grass carp (Ctenopharyngodon idellus) Rong Huang, Jianjian Lv, Daji Luo, Lanjie Liao, Zuoyan Zhu, Yaping Wang Show preview | PDF (1088 K) | Related articles | Related reference work articles Highlights ► We suggested the existence of Tollip and IRAK-1 proteins since the teleost evolved. ► Tollip and IRAK-1 expression were elevated following viral infection in Grass carp. ► Tollip and IRAK-1 were distributed and co-localized in the cytoplasm of CIK cells. ► We confirmed the interaction of Tollip and IRAK-1 in teleost after viral infection.

Characterization and evaluation of sex-specific expression of suppressors of cytokine signaling (SOCS)-1 and -3 in juvenile yellow perch (Perca flavescens) treated with lipopolysaccharide Brian S. Shepherd, Christopher B. Rees, Fred P. Binkowski, Frederick W. Goetz Show preview | PDF (2446 K) | Related articles | Related reference work articles Highlights ► We investigated sex-specific expression of SOCS-1 and SOCS-3 in yellow perch, Perca flavescens. ► The cDNAs for SOCS-1 and SOCS-3 were characterized. ► Transcripts for ypSOCS-1 and -3 were detected in the gill, head kidney, kidney, liver and spleen. ► Both SOCS-1 and -3 mRNAs were induced by 6 h post-injection with LPS. ► Expression of ypSOCS-3 mRNA was sexually-dimorphic in kidney and head kidney.

Interferon type I responses to virus infections in carp cells: In vitro studies on Cyprinid herpesvirus 3 and Rhabdovirus carpio infections Mikołaj Adamek, Krzysztof Ł. Rakus, Jarosław Chyb, Graham Brogden, Arne Huebner, Ilgiz Irnazarow, Dieter Steinhagen Show preview | PDF (1062 K) | Supplementary content | Related articles | Related reference work articles Highlights ► CyHV-3 and SVCV induced fundamentally different IFN type I responses in CCB cells. ► Lack of an IFN type I response to CyHV-3 is an indicator of virus anti-IFN actions. ► IFN type I in CyHV-3 infected cells can limit the spread of virus in cell culture.

Orange-spotted grouper (Epinephelus coioides) toll-like receptor 22: Molecular characterization, expression pattern and pertinent signaling pathways Xu Ding, Dan-qi Lu, Qing-hua Hou, Shui-sheng Li, Xiao-chun Liu, Yong Zhang, Hao-ran Lin Show preview | PDF (1160 K) | Related articles | Related reference work articles Highlights ► The first report on TLR22 gene in grouper. ► The first time to compare the two main TLR22-singling pathways in vitro stimulation. ► The expression study suggests TLR22 may play a crucial role in host innate immunologic surveillance.

Gene cloning and function analysis of complement B factor-2 of Apostichopus japonicus Lei Zhong, Feng Zhang, Yaqing Chang

Aquaculture Journals Page: 188 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (3190 K) | Related articles | Related reference work articles Highlights ► A complement B factor is cloned and characterized from Apostichopus japonicas. ► The gene sequence show significant similarity to the vertebrate Bf/C2 family. ► The function of AjBf-2 must be participate in the immune reaction. ► We extrapolated the AjBf-2 involved immune system has a self-checking mechanism.

Edwardsiella tarda sialidase: Pathogenicity involvement and vaccine potential Ren-ping Jin, Yong-hua Hu, Bo-guang Sun, Xiao-hua Zhang, Li Sun Show preview | PDF (611 K) | Related articles | Related reference work articles Highlights ► Recombinant NanA (rNanA) possesses pH- and temperature-dependent sialidase activity. ► NanA is exposed on cell surface and able to interact with anti-rNanA antibodies. ► nanA mutation attenuated Edwardsiella tarda virulence in a live fish model. ► rNanA induced protective immune response in Japanese flounder. ► Anti-rNanA antibodies blocked E. tarda infection of flounder cells.

Expression pattern, promoter activity and bactericidal property of β-defensin from the mandarin fish Siniperca chuatsi Gailing Wang, Junhua Li, Pengfei Zou, Haixia Xie, Bei Huang, Pin Nie, Mingxian Chang Show preview | PDF (1351 K) | Related articles | Related reference work articles Highlights ► The first report showing the characterization of a mandarin β-defensin, ScBD. ► ScBD was highly expressed in lymphoid organs and mucosal tissues of healthy fish. ► −705/−498 bp region in the promoter contains positive regulatory elements. ► ScBD acts as an antimicrobial peptide.

Selenium-dependent glutathione peroxidase gene expression during gonad development and its response to LPS and H2O2 challenge in Scylla paramamosain Mingjun Fu, Zhihua Zou, Shengfa Liu, Peng Lin, Yilei Wang, Ziping Zhang Show preview | PDF (2099 K) | Related articles | Related reference work articles Highlights ► A selenium-dependent GPx cDNA was cloned and characterized from Scylla paramamosain. ► SpGPx share a closer relationship with selected invertebrate GPxs and vertebrate GPx1 and GPx2. ► The expression level of SpGPx in gill and testis was higher than that in the other tissues. ► SpGPx might play an important role in gonad development. ► SpGPx was involved in the immune response induced by LPS and H2O2.

Synergies between vaccination and dietary arginine and glutamine supplementation improve the immune response of channel catfish against Edwardsiella ictaluri Camilo Pohlenz, Alejandro Buentello, Michael F. Criscitiello, Waithaka Mwangi, Roger Smith, Delbert M. Gatlin III Show preview | PDF (747 K) | Related articles | Related reference work articles Highlights ► Fish vaccination efficacy was evaluated under arginine and glutamine supplementation. ► Feeding supplemental amino acids levels increased plasma specific antibodies. ► Glutamine

Aquaculture Journals Page: 189 of 331

Aquaculture Journals – Table of Contents

modulated B-lymphocyte population in spleen and head kidney. ► Both amino acids enhanced responsiveness of tissue-residing lymphocytes. ► Evidence from this study is promising for the elaboration of functional aquafeeds.

Production and characterization of monoclonal antibodies to IgM of Pacific herring (Clupea pallasii) Maureen K. Purcell, Erin S. Bromage, Jessica Silva, John D. Hansen, Samantha M. Badil, James C. Woodson, Paul K. Hershberger Show preview | PDF (878 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The gene encoding the constant domains of the Pacific herring IgM heavy chain was identified. ► Three Pacific herring anti-IgM monoclonal antibodies were developed, which reacted specifically to the heavy chain. ► Pacific herring monoclonal antibodies recognize both denatured and cell-surface IgM.

Single nucleotide polymorphisms in i-type lysozyme gene and their correlation with vibrio-resistance and growth of clam Meretrix meretrix based on the selected resistance stocks Xin Yue, Hongxia Wang, Xiaohong Huang, Chao Wang, Xueliang Chai, Chunde Wang, Baozhong Liu Show preview | PDF (914 K) | Related articles | Related reference work articles Highlights ► Stocks of Meretrix meretrix with different vibrio-resistance were obtained. ► Twenty- seven SNPs were detected in the sequence of i-type lysozyme of M. meretrix. ► Fifteen of the SNPs were genotyped in the stocks with different vibrio-resistance. ► SNP loci 9, 12 and 14 were associated with both vibrio-resistance and growth.

Immunization of olive flounder (Paralichthys olivaceus) with an auxotrophic Edwardsiella tarda mutant harboring the VHSV DNA vaccine Seung Hyuk Choi, Min Sun Kim, Ki Hong Kim Show preview | PDF (460 K) | Related articles | Related reference work articles Highlights ► Marine medaka β-actin promoter was stronger than CMV promoter in olive flounder. ► Mutant Edwardsiella tarda as a delivery vehicle for DNA vaccine against VHSV was assessed. ► Mutant with β-actin promoter-driven DNA vaccine induced high protection against VHSV.

Characterization of shrimp Drosha in virus infection Tianzhi Huang, Dandan Xu, Xiaobo Zhang Show preview | PDF (1588 K) | Related articles | Related reference work articles Highlights ► The Drosha was first characterized in the shrimp Marsupenaeus japonicus. ► Drosha was involved in the antiviral immunity of shrimp. ► Knock down of Drosha gene led to the defect of miRNA maturation, and subsequent higher virus loads in shrimp.

Type of carbohydrate in feed affects the expression of small leucine-rich proteoglycans (SLRPs), glycosaminoglycans (GAGs) and interleukins in skeletal muscle of Atlantic cod (Gadus morhua L.)

Aquaculture Journals Page: 190 of 331

Aquaculture Journals – Table of Contents

M.G. Tingbø, M.E. Pedersen, F. Grøndahl, S.O. Kolset, E. Veiseth-Kent, G. Enersen, K.O. Hannesson Show preview | PDF (603 K) | Related articles | Related reference work articles Highlights ► Compared fish fed diets containing complex carbohydrates vs. high starch levels. ► Diabetes-like condition in marine fish induced by high starch intake. ► Diet-induced extracellular matrix changes were demonstrated. ► Suggestion of inflammation in muscle of hyperglycemic fish induced by high starch diet. ► Changes in muscle proteoglycan, glycosaminoglycan and interleukin expressions.

Immunostimulatory response induced by supplementation of Ficus benghalensis root powder, in the artificial feed the Indian freshwater murrel, Channa punctatus Vipin Kumar Verma, Kumari Vandana Rani, Neeta Sehgal, Om Prakash Show preview | PDF (488 K) | Related articles | Related reference work articles Highlights ► It is the first report on immunostimulatory response of Ficus benghalensis in Channa. ► Both specific and non-specific immunity of Channa punctatus is boosted. ► Sandwich ELISA has been developed for analysis of immunoglobulin levels. ► There are no visual and physiological symptoms of disease/stress.

Molecular cloning of prophenoloxidase and the effects of dietary β-glucan and rutin on immune response in hemocytes of the fleshy shrimp, Fenneropenaeus chinensis Sun-Hye Bae, Bong-Rae Kim, Bong Jung Kang, Naoaki Tsutsui, Tomoyuki Okutsu, Junpei Shinji, In Kwon Jang, Chang-Hee Han, Marcy N. Wilder Show preview | PDF (1628 K) | Related articles | Related reference work articles Highlights ►Prophenoloxidase in hemocytes of Fenneropenaus chinensis has a full-length cDNA sequence of 3023 bp. ► β-glucan and rutin were tested in a feeding trial to determine their potential as immunostimulants. ► Total hemocyte count (THC) was significantly increased in shrimp fed test diets. ► Changes in the expression of immune-related genes was minimal in the absence of pathogen challenge.

Short Communications

Molecular cloning and functional analysis of a voltage-gated potassium channel in lymphocytes from sea perch, Lateolabrax japonicus Yongjie Wang, Bailin Cong, Jihong Shen, Shenghao Liu, Feng Liu, Nengfei Wang, Xiaohang Huang Show preview | PDF (2181 K) | Related articles | Related reference work articles Highlights ► For the first time, the full length of Kv1.3 gene was gotten from Japanese sea perch. ► spKv1.3 was a constitutive and inducible acute-phase gene in sea perch lymphocytes. ► LPS can increase the expression level of spKv1.3 mRNA. ► We found 4-AP+LPS can increase the spKv1.3 mRNA expression levels in time course. ► spKv1.3 genomic DNA was intronless.

Aquaculture Journals Page: 191 of 331

Aquaculture Journals – Table of Contents

The molecular cloning and characteristics of a fibrinogen-related protein (TfFREP1) gene from roughskin (Trachidermus fasciatus) Yingmei Chai, Shanshan Yu, Qian Zhu Show preview | PDF (368 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Isolate and characterize the fibrinogen-like domain protein cDNA from roughskin sculpin (designated as TfFREP1). ► TfFREP1 was upregulated in skin and gill by LPS stimulating. ► TfFREP1 protein was upregulated significantly in skin and gill. ► TfFREP1 may play an important role in the immune response of roughskin sculpin.

Immune role of MrNFκBI-α, an IκB family member characterized in prawn M. rosenbergii Jesu Arockiaraj, Farhat Ahmadi Avin, Puganeshwaran Vanaraja, Sarasvathi Easwvaran, Arun Singh, Rofina Yasmin Othman, Subha Bhassu Show preview | PDF (1126 K) | Related articles | Related reference work articles Highlights ► MrNFκBI-α protein contains six ankyrin repeats between 193 and 413. ► An IκB degradation motif is present at the N-terminal of MrNFκBI-α. ► In C-terminal, a putative PEST motif is present at 418–471. ► MrNFκBI-α is expressed in all the tissues and the highest at hemocytes. ► Gene expression is up-regulated after viral and bacterial immune injection.

Transcriptional regulation of cytokines in the intestine of Atlantic cod fed yeast derived mannan oligosaccharide or β-Glucan and challenged with Vibrio anguillarum Jep Lokesh, Jorge M.O. Fernandes, Kjetil Korsnes, Øivind Bergh, Monica F. Brinchmann, Viswanath Kiron Show preview | PDF (237 K) | Related articles | Related reference work articles Highlights ► Yeast products in diet affected the intestinal immune responses of Atlantic cod. ► Transcription of the cytokine genes, il1b, il8, ifng and il10 were altered. ► These changes were noted particularly after bacterial exposure. ► MOS and β-glucan influenced the intestinal cytokines differently.

Characterization and SNP variation analysis of a HSP70 gene from miiuy croaker and its expression as related to bacterial challenge and heat shock Tao Wei, Yuena Sun, Ge Shi, Rixin Wang, Tianjun Xu Show preview | PDF (2124 K) | Related articles | Related reference work articles Highlights ► A complete HSP70 cDNA (Mimi-HSP70) was cloned from Miichthys miiuy. ► SNP variation sites were detected by genomic analysis from Miichthys miiuy. ► Expression levels of HSP70 were detected in organs exposed to heat shock environment. ► Expression levels of HSP70 were detected under bacterial infection in organs.

Individual variability of mytimycin gene expression in mussel Franck Cantet, Mylène Toubiana, Maria-Giovanna Parisi, Molruedee Sonthi, Matteo Cammarata, Philippe Roch Show preview | PDF (495 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 192 of 331

Aquaculture Journals – Table of Contents

Highlights ► Antifungal mytimycin gene is expressed in 42% of circulating hemocytes in non-treated mussels. ► Injection with Fusarium oxysporum increased such percentage, as observed by ISH or measured in q-PCR. ► Only some mussels reacted to the injection.

A novel tissue inhibitor of metalloproteinase in blood clam Tegillarca granosa: Molecular cloning, tissue distribution and expression analysis Qing Wang, Yongbo Bao, Lihui Huo, Hailong Gu, Zhihua Lin Show preview | PDF (1492 K) | Related articles | Related reference work articles Highlights ► First clone and characterization TIMP in bloody clam Tegillarca granosa. ► Tg-TIMP-4 was drastically up-regulated after Vibrio parahaemolyticus, LPS and PGN challenge. ► The results indicated that Tg-TIMP-4 might play key role in anti-bacteria immunity.

Molecular cloning, characterization and expression analysis of tumor necrosis factor receptor-associated factor 3 (TRAF3) from pearl oyster Pinctada fucata Xian-De Huang, Wen-Guang Liu, Yun-Yan Guan, Yu Shi, Qi Wang, Mi Zhao, Shan-Zeng Wu, Mao-Xian He Show preview | PDF (1863 K) | Related articles | Related reference work articles Highlights ► Tumor necrosis factor receptor-associated factor 3 (TRAF3) from Pinctada fucata was cloned. ► PfTRAF3 shared a lower identity with insect homologues. ► PfTRAF3 was involved in the immune response to Vibrio alginolyticus

Molecular cloning and characterization of class I NF-κB transcription factor from pearl oyster (Pinctada fucata) Xian-De Huang, Wen-Guang Liu, Yun-Yan Guan, Yu Shi, Qi Wang, Mi Zhao, Shan-Zeng Wu, Mao-Xian He Show preview | PDF (2984 K) | Related articles | Related reference work articles Highlights ► PfRelish from Pinctada fucata in mollusks was cloned. ► PfRelish might have most distant relationship to the arthropod Relish. ► PfRelish was involved in the immune response to Vibrio alginolyticus.

Isolation and characterization of a thioredoxin domain-containing protein 12 from orange-spotted grouper, Epinephelus coioides Jingguang Wei, Huasong Ji, Minglan Guo, Qiwei Qin Show preview | PDF (1279 K) | Related articles | Related reference work articles Highlights ► A thioredoxin domain-containing protein 12 (Txndc12) was firstly cloned from marine fish of orange-spotted grouper, Epinephelus coioides. ► The expression of Ec-Txndc12 was up-regulated in the liver of grouper challenged with SGIV. ► The rEc-Txndc12 fusion protein was demonstrated to possess the antioxidant activity.

Previous – Top – Next

Aquaculture Journals Page: 193 of 331

Aquaculture Journals – Table of Contents

FFFiiissshhheeerrriiieeesss SSSccciiieeennnccceee

VOLUME 74, PART 6, DECEMBER 2008 Website

No new issue available

Previous – Top – Next

Aquaculture Journals Page: 194 of 331

Aquaculture Journals – Table of Contents

HHHyyydddrrrooobbbiiiooolllooogggiiiaaa

VOLUME 690, JULY 2012 Website

Research articles

Jellyfish Blooms: Interactions with Humans and Fisheries Guest Editors: Jennifer E. Purcell , Hermes Mianzan and Jessica R. Frost

Preface: blooms: interactions with humans and fisheries Hermes Mianzan, Jennifer E. Purcell and Jessica R. Frost Download PDF (114.2 KB) View HTML Supplemental

Open Access Increasing jellyfish populations: trends in Large Marine Ecosystems Lucas Brotz, William W. L. Cheung, Kristin Kleisner, Evgeny Pakhomov and Daniel Pauly Download PDF (1.3 MB) View HTML

Transitions of Mnemiopsis leidyi (: Lobata) from a native to an exotic species: a review J. H. Costello, K. M. Bayha, H. W. Mianzan, T. A. Shiganova and J. E. Purcell Download PDF (1.5 MB) View HTML

Foods of Velella velella (: Hydrozoa) in algal rafts and its distribution in Irish seas Jennifer E. Purcell, Emmett Clarkin and Thomas K. Doyle Download PDF (344.6 KB) View HTML

Do Staurozoa bloom? A review of stauromedusan population biology Lucília S. Miranda, André C. Morandini and Antonio C. Marques Download PDF (280.2 KB) View HTML Supplemental

Comparative phylogeography of meroplanktonic species, Aurelia spp. and Rhizostoma pulmo (Cnidaria: ) in European Seas Andreja Ramšak, Katja Stopar and Alenka Malej Download PDF (584.3 KB) View HTML Supplemental

Associations of large jellyfish distributions with temperature and salinity in the Yellow Sea and East China Sea Fang Zhang, Song Sun, Xianshi Jin and Chaolun Li Download PDF (1.2 MB) View HTML

Limnocnida tanganyicae medusae (Cnidaria: Hydrozoa): a semiautonomous microcosm in the food web of Lake Tanganyika Kalevi Salonen, Pia Högmander, Victor Langenberg, Hannu Mölsä and Jouko Sarvala, et al. Download PDF (783.1 KB) View HTML

Large medusae in surface waters of the Northern California Current: variability in relation to environmental conditions Cynthia L. Suchman, Richard D. Brodeur, Elizabeth A. Daly and Robert L. Emmett Download PDF (521.3 KB) View HTML

Aquaculture Journals Page: 195 of 331

Aquaculture Journals – Table of Contents

Effects of climate warming on strobilation and ephyra production of North Sea scyphozoan jellyfish Sabine Holst Download PDF (497.8 KB) View HTML

Ecological aspects of early life stages of Cotylorhiza tuberculata (Scyphozoa: ) affecting its pelagic population success Diana Astorga, Javier Ruiz and Laura Prieto Download PDF (383.1 KB) View HTML

The potential role of podocysts in perpetuation of the common jellyfish Aurelia aurita s.l. (Cnidaria: Scyphozoa) in anthropogenically perturbed coastal waters Htun Thein, Hideki Ikeda and Shin-ichi Uye Download PDF (491.1 KB) View HTML Supplemental

Temperature effects on asexual reproduction rates of scyphozoan species from the northwest Mediterranean Sea Jennifer E. Purcell, Dacha Atienza, Verónica Fuentes, Alejandro Olariaga and Uxue Tilves, et al. Download PDF (336.3 KB) View HTML

Predator-induced vertical behavior of a ctenophore Josefin Titelman, Lars Johan Hansson, Trygve Nilsen, Sean P. Colin and John H. Costello Download PDF (574.8 KB) View HTML

Predation potential of the jellyfish Drymonema larsoni Bayha & Dawson (Scyphozoa: Drymonematidae) on the moon jellyfish Aurelia sp. in the northern Gulf of Mexico Keith M. Bayha, William M. Graham, John E. Higgins III and Heather A. Fletcher Download PDF (310.3 KB) View HTML

Nudibranch predation and dietary preference for the polyps of Aurelialabiata (Cnidaria: Scyphozoa) Richard A. Hoover, Ruth Armour, Ian Dow and Jennifer E. Purcell Download PDF (441.9 KB) View HTML

Parasitism (Trematoda, Digenea) in medusae from the southwestern Atlantic Ocean: medusa hosts, parasite prevalences, and ecological implications Luciana M. Diaz Briz, Sergio R. Martorelli, Gabriel N. Genzano and Hermes W. Mianzan Download PDF (700.4 KB) View HTML

Jelly-falls historic and recent observations: a review to drive future research directions Mario Lebrato, Kylie A. Pitt, Andrew K. Sweetman, Daniel O. B. Jones and Joan E. Cartes, et al. Download PDF (565.4 KB) View HTML

Pulse perturbations from bacterial decomposition of Chrysaoraquinquecirrha (Scyphozoa: Pelagiidae) Jessica R. Frost, Charles A. Jacoby, Thomas K. Frazer and Andrew R. Zimmerman Download PDF (279.4 KB) View HTML

Abundance patterns of cubozoans on and near the Great Barrier Reef M. J. Kingsford, J. E. Seymour and M. D. O’Callaghan Download PDF (851.5 KB) View HTML

Aquaculture Journals Page: 196 of 331

Aquaculture Journals – Table of Contents

Sources and movements of Chironex fleckeri medusae using statolith elemental chemistry C. J. Mooney and M. J. Kingsford Download PDF (378.3 KB) View HTML

Variation in soft tissue chemistry among scyphozoan and cubozoan from the Great Barrier Reef, Australia Michelle A. Templeman and Michael J. Kingsford Download PDF (372.8 KB) View HTML

Previous – Top – Next

VOLUME 691, JULY 2012 Website

Research articles

Review Paper

Cercariae (Platyhelminthes: Trematoda) as neglected components of zooplankton communities in freshwater habitats N. J. Morley Download PDF (406.7 KB) View HTML

A review on the “in vitro” culture of freshwater mussels (Unionoida) Paula Lima, Manuel Lopes Lima, Uthaiwan Kovitvadhi, Satit Kovitvadhi and Christopher Owen, et al. Download PDF (237.9 KB) View HTML Supplemental

Primary Research Paper

Shifts in small-bodied fish assemblages resulting from drought-induced water level recession in terminating lakes of the Murray-Darling Basin, Australia Scotte D. Wedderburn, Michael P. Hammer and Christopher M. Bice Download PDF (703.4 KB) View HTML

Incorporating invasive weeds into a plant indicator method (LakeSPI) to assess lake ecological condition M. D. de Winton, J. S. Clayton and T. Edwards Download PDF (408.4 KB) View HTML

Spatial distribution of subfossil in surface sediments of a large, shallow and hypertrophic lake (Taihu, SE China) Yanmin Cao, Enlou Zhang, Xu Chen, N. John Anderson and Ji Shen Download PDF (527.9 KB) View HTML

Diatom response to the whole lake manipulation of a eutrophic urban impoundment Shifra Z. Goldenberg and John T. Lehman Download PDF (358.5 KB) View HTML

Herbivory limits the yellow water lily in an overgrown lake and in flowing water Johan A. Stenberg and Johanna E. Stenberg Download PDF (336.9 KB) View HTML Supplemental

Aquaculture Journals Page: 197 of 331

Aquaculture Journals – Table of Contents

Hot and salty: the temperature and salinity preferences of a temperate estuarine shrimp , Upogebia pusilla (Decapoda: Thalassinidea) Filipa Faleiro, José Paula and Luís Narciso Download PDF (379.9 KB) View HTML

The effects of Microcystis aeruginosa (cyanobacterium) on Cryptomonas ovata (Cryptophyta) in laboratory cultures: why these organisms do not coexist in steady-state assemblages? Viktória B-Béres, István Grigorszky, Gábor Vasas, Gábor Borics and Gábor Várbíró, et al. Download PDF (478.7 KB) View HTML

Open Access Spatial variation of composition, biovolume, and resulting microcystin concentrations in the Nyanza Gulf (Lake Victoria, Kenya) L. Sitoki, R. Kurmayer and E. Rott Download PDF (515.9 KB) View HTML Supplemental

Linking genetic assignment tests with telemetry enhances understanding of spawning migration and homing in sea trout Salmo trutta L. Johan Östergren, Jan Nilsson and Hans Lundqvist Download PDF (606.7 KB) View HTML

Effect of small reservoirs on leaf litter decomposition in Mediterranean headwater streams Margarita Menéndez, Enrique Descals, Tecla Riera and Oscar Moya Download PDF (403.2 KB) View HTML

Can coastal biodiversity measured in four Mediterranean sites be representative of the region? A test for the robustness of the NaGISA protocol by using the hard substrate syllid (Annelida, Polychaeta) taxo-communities as a surrogate Georgios Chatzigeorgiou, Sarah Faulwetter, Eduardo López, Rafael Sardá and Christos Arvanitidis Download PDF (390.4 KB) View HTML

Parameterization of chlorophyll a-specific absorption coefficients and effects of their variations in a highly eutrophic lake: a case study at Lake Kasumigaura, Japan Kazuya Yoshimura, Nobuhiro Zaitsu, Yuta Sekimura, Bunkei Matsushita and Takehiko Fukushima, et al. Download PDF (621.5 KB) View HTML

Assessing the condition of the Missouri, Ohio, and Upper Mississippi rivers (USA) using diatom-based indicators Amy R. Kireta, Euan D. Reavie, Gerald V. Sgro, Ted R. Angradi and David W. Bolgrien, et al. Download PDF (632.8 KB) View HTML Supplemental

Precipitation patterns, dissolved organic matter and changes in the plankton assemblage in Lake Escondido (Patagonia, Argentina) Marcela A. Bastidas Navarro and Beatriz E. Modenutti Download PDF (904.1 KB) View HTML

Experimental evidence for niche segregation in a sister species pair of non-biting midges Sabrina Nemec, Maren Heß, Carsten Nowak and Markus Pfenninger Download PDF (391.6 KB) View HTML

Aquaculture Journals Page: 198 of 331

Aquaculture Journals – Table of Contents

New genetic markers reveal population genetic structure at different spatial scales in the opportunistic polychaete Pygospio elegans J. E. Kesäniemi, C. Boström and K. E. Knott Download PDF (239.0 KB) View HTML

Genetic variation of European grayling (Thymallus thymallus) populations in the Western Balkans Saša Marić, Belma Kalamujić, Aleš Snoj, Andrej Razpet and Lada Lukić-Bilela, et al. Download PDF (580.5 KB) View HTML Supplemental

Sensitivity of dissolved organic carbon exchange and sediment bacteria to water quality in mangrove forests María Fernanda Adame, Ruth Reef, Jorge A. Herrera-Silveira and Catherine E. Lovelock Download PDF (544.0 KB) View HTML

The role of environmental parameters in the structure of phytoplankton assemblages and cyanobacteria toxins in two hypereutrophic lakes L. Xie, R. R. Rediske, Y. Hong, J. O’Keefe and N. D. Gillett, et al. Download PDF (652.9 KB) View HTML

Haloleptolyngbya alcalis gen. et sp. nov., a new filamentous cyanobacterium from the soda lake Nakuru, Kenya Pawan K. Dadheech, Huda Mahmoud, Kiplagat Kotut and Lothar Krienitz Download PDF (761.5 KB) View HTML

Size fractionated phytoplankton production in two humic shallow lakes with contrasting coverage of free floating plants Patricia Rodríguez, Haydée Pizarro and M. Solange Vera Download PDF (583.8 KB) View HTML

Erratum to: Assessing the range of newly established invasive species in rivers using probabilistic methods I. Jarić, G. Cvijanović, A. Hegediš and M. Lenhardt Download PDF (94.4 KB) View HTML

Previous – Top – Next

VOLUME 692, AUGUST 2012 Website

Research articles Wetland services and management Guest Editor: Chris B. Joyce

Preface: Wetland services and management Chris Joyce Download PDF (108.2 KB) View HTML

Managing the natural capital of papyrus within riparian zones of Lake Victoria, Kenya E. H. J. Morrison, C. Upton, K. Odhiambo-K’oyooh and D. M. Harper Download PDF (593.8 KB) View HTML

Composition and structure of macroinvertebrate communities in contrasting open-water habitats in Irish peatlands: implications for biodiversity conservation Aquaculture Journals Page: 199 of 331

Aquaculture Journals – Table of Contents

Edel Hannigan and Mary Kelly-Quinn Download PDF (286.3 KB) View HTML Supplemental

The influence of flood duration on the surface soil properties and grazing management of karst wetlands (turloughs) in Ireland Sarah Kimberley, Owen Naughton, Paul Johnston, Laurence Gill and Steve Waldren Download PDF (390.7 KB) View HTML

Emissions of CO2, CH4 and N2O from undisturbed, drained and mined peatlands in Estonia Jüri-Ott Salm, Martin Maddison, Sille Tammik, Kaido Soosaar and Jaak Truu, et al. Download PDF (720.3 KB) View HTML

Fluctuating water table affects gross ecosystem production and gross radiation use efficiency in a sedge-grass marsh J. Dušek, H. Čížková, S. Stellner, R. Czerný and J. Květ Download PDF (418.5 KB) View HTML

Nutrient addition retards decomposition and C immobilization in two wet grasslands Eva Kaštovská, Tomáš Picek, Jiří Bárta, Jiří Mach and Tomáš Cajthaml, et al. Download PDF (354.0 KB) View HTML

Differential responses of abandoned wet grassland plant communities to reinstated cutting management Maureen Berg, Chris Joyce and Niall Burnside Download PDF (619.4 KB) View HTML Supplemental

Biomass and nutrient stock of submersed and floating macrophytes in shallow lakes formed by rewetting of degraded fens P. Steffenhagen, D. Zak, K. Schulz, T. Timmermann and S. Zerbe Download PDF (427.1 KB) View HTML

The use of integrated constructed wetlands (ICW) for the treatment of separated swine wastewaters Caolan Harrington, Miklas Scholz, Noel Culleton and Peadar G. Lawlor Download PDF (369.9 KB) View HTML

A review of the potential of surface flow constructed wetlands to enhance macroinvertebrate diversity in agricultural landscapes with particular reference to Integrated Constructed Wetlands (ICWs) Gustavo Becerra-Jurado, Rory Harrington and Mary Kelly-Quinn Download PDF (285.8 KB) View HTML

Removal of alkali metals and their sequestration in plants in constructed wetlands treating municipal sewage Jan Vymazal and Jaroslav Šveha Download PDF (256.9 KB) View HTML

Reuse potential of phosphorus-rich filter materials from subsurface flow wastewater treatment filters for forest soil amendment Margit Kõiv, Ivika Ostonen, Christina Vohla, Riho Mõtlep and Martin Liira, et al. Download PDF (262.6 KB) View HTML Previous – Top – Next

Aquaculture Journals Page: 200 of 331

Aquaculture Journals – Table of Contents

VOLUME 693, SEPTEMBER 2012 Website

Research articles

Ferry wakes increase seaweed richness and abundance in a sheltered rocky intertidal habitat Kyle W. Demes, Rebecca L. Kordas and Jennifer P. Jorve Download PDF (514.1 KB) View HTML

Phytoplankton biomass is mainly controlled by hydrology and phosphorus concentrations in tropical hydroelectric reservoirs Luciana M. Rangel, Lúcia H. S. Silva, Priscila Rosa, Fábio Roland and Vera L. M. Huszar Download PDF (604.4 KB) View HTML

Predicting the light attenuation coefficient through Secchi disk depth and beam attenuation coefficient in a large, shallow, freshwater lake Yunlin Zhang, Xiaohan Liu, Yan Yin, Mingzhu Wang and Boqiang Qin Download PDF (354.8 KB) View HTML Supplemental

Hydroclimatic and hydrochemical controls on Plecoptera diversity and distribution in northern freshwater ecosystems Laura M. Kruitbos, Doerthe Tetzlaff, Chris Soulsby, Jim Buttle and Sean K. Carey, et al. Download PDF (417.9 KB) View HTML Supplemental

The Australian monsoon tropics as a barrier for exchange of dragonflies (Insecta: Odonata) between New Guinea and Australia V. J. Kalkman and A. G. Orr Download PDF (6.1 MB) View HTML

Photochemical mineralization of dissolved organic nitrogen to ammonia in prairie lakes Sereda Jeff, Kristine Hunter, David Vandergucht and Jeff Hudson Download PDF (351.4 KB) View HTML

Morphology, biochemistry, and growth of strains from the Gulf of California C. J. Band-Schmidt, A. Martínez-López, J. J. Bustillos-Guzmán, L. Carreón-Palau and L. Morquecho, et al. Download PDF (592.4 KB) View HTML

Methodologies for measuring and modelling change in coastal saline lagoons under historic and accelerated sea-level rise, Suffolk coast, eastern England Thomas Spencer and Susan M. Brooks Download PDF (994.1 KB) View HTML

Interactive influences of the marine yabby (Trypaea australiensis) and mangrove (Avicennia marina) leaf litter on benthic metabolism and nitrogen cycling in sandy estuarine sediment Ryan J. K. Dunn, David T. Welsh, Mark A. Jordan, James M. Arthur and Charles J. Lemckert, et al. Download PDF (635.9 KB) View HTML

Alternative egg-feeding tactics in Telmatherina sarasinorum, a trophic specialist of Lake Matano’s evolving sailfin silversides fish radiation

Aquaculture Journals Page: 201 of 331

Aquaculture Journals – Table of Contents

Alexander F. Cerwenka, Juliane D. Wedekind, Renny K. Hadiaty, Ulrich K. Schliewen and Fabian Herder Download PDF (371.9 KB) View HTML

Fish assemblage structure in urban streams of Puerto Rico: the importance of reach- and catchment-scale abiotic factors Augustin C. Engman and Alonso Ramírez Download PDF (474.7 KB) View HTML

Using ecological niche modeling to predict the distributions of two endangered amphibian species in aquatic breeding sites Lior Blank and Leon Blaustein Download PDF (402.3 KB) View HTML

Feeding patterns and population structure of an invasive cyprinid, the rudd Scardinius erythrophthalmus (Cypriniformes, Cyprinidae), in Buffalo Harbor (Lake Erie) and the upper Niagara River Kevin L. Kapuscinski, John M. Farrell and Michael A. Wilkinson Download PDF (481.1 KB) View HTML

Does functional redundancy of communities provide insurance against human disturbances? An analysis using regional-scale stream invertebrate data Dénes Schmera, Bruno Baur and Tibor Erős Download PDF (498.2 KB) View HTML

Period-dependent sex-biased movement in a polygamous stream fish (Cottus perifretum Freyhof, Kottelat & Nolte, 2005—, ) with male parental care Alexander Kobler, Yves Humblet, Katia Geudens and Marcel Eens Download PDF (269.7 KB) View HTML

Phylogeography of European grayling, Thymallus thymallus (Actinopterygii, Salmonidae), within the Northern Adriatic basin: evidence for native and exotic mitochondrial DNA lineages A. Meraner and A. Gandolfi Download PDF (403.2 KB) View HTML Supplemental

Holocene environmental change at Lake Shudu, Yunnan Province, southwestern China Richard T. Jones, Charlotte G. Cook, Enlou Zhang, Peter G. Langdon and Jason Jordan, et al. Download PDF (788.7 KB) View HTML

Associations between stream habitat characteristics and native and alien crayfish occurrence Martin Weinländer and Leopold Füreder Download PDF (553.4 KB) View HTML

Aquatic metabolism short-term response to the flood pulse in a Mediterranean floodplain B. Gallardo, C. Español and F. A. Comin Download PDF (579.7 KB) View HTML

Previous – Top – Next

VOLUME 694, SEPTEMBER 2012 Website Aquaculture Journals Page: 202 of 331

Aquaculture Journals – Table of Contents

Research articles

Review Paper

Impacts of climate warming on the long-term dynamics of key fish species in 24 European lakes Erik Jeppesen, Thomas Mehner, Ian J. Winfield, Külli Kangur and Jouko Sarvala, et al. Download PDF (967.7 KB) View HTML

Primary Research Paper

Shifts in taxonomical and guild composition of littoral diatom assemblages along environmental gradients Steffi Gottschalk and Maria Kahlert Download PDF (966.7 KB) View HTML Supplemental

High-frequency metabolism study in a large and shallow temperate lake reveals seasonal switching between net autotrophy and net heterotrophy Alo Laas, Peeter Nõges, Toomas Kõiv and Tiina Nõges Download PDF (701.4 KB) View HTML

Assessing the effects of sewage effluents in a Mediterranean creek: fish population features and biotic indices Blanca Figuerola, Alberto Maceda-Veiga and Adolfo De Sostoa Download PDF (312.2 KB) View HTML

Evidence of elevated mercury levels in carnivorous and omnivorous fishes downstream from an Amazon reservoir Daniele Kasper, Elisabete Fernandes Albuquerque Palermo, Christina Wyss Castelo Branco and Olaf Malm Download PDF (521.6 KB) View HTML

Young-of-the-year fish assemblages as indicators of anthropogenic disturbances in large tributaries of the Seine River Basin (France) J. Leclere, J. Belliard and T. Oberdorff Download PDF (549.5 KB) View HTML

Short-term changes in-stream macroinvertebrate communities following a severe fire in the Lake Tahoe basin, California Allison A. Oliver, Michael T. Bogan, David B. Herbst and Randy A. Dahlgren Download PDF (502.2 KB) View HTML

Grazing rates of crustacean zooplankton communities on intact phytoplankton communities in Canadian Subarctic lakes and ponds Celia C. Symons, Shelley E. Arnott and Jon N. Sweetman Download PDF (516.1 KB) View HTML

The invasive New Zealand mudsnail, Potamopyrgus antipodarum, is an effective grazer of algae and altered the assemblage of more than native grazers Amy C. Krist and Caroline C. Charles Download PDF (372.9 KB) View HTML

Aquaculture Journals Page: 203 of 331

Aquaculture Journals – Table of Contents

Fish diversity and assemblage patterns along the longitudinal gradient of a tropical river in the Indo-Burma hotspot region (Ping-Wang River Basin, Thailand) Apinun Suvarnaraksha, Sovan Lek, Sithan Lek-Ang and Tuantong Jutagate Download PDF (658.0 KB) View HTML Supplemental

Effect of biofilm on the rheological properties of cohesive sediment Hongwei Fang, Huiming Zhao, Qianqian Shang and Minghong Chen Download PDF (786.7 KB) View HTML

Fish scale δ15N and δ13C values provide biogeochemical tags of fish comparable in performance to element concentrations in scales and otoliths Alice L. Ramsay, Nigel J. Milner, Roger N. Hughes and Ian D. McCarthy Download PDF (389.1 KB) View HTML

Waterbird-mediated passive dispersal of river shrimp Athyaephyra desmaresti Filipe Banha and Pedro Manuel Anastácio Download PDF (268.0 KB) View HTML

Biodiversity and intensification in French fishpond systems Joël Broyer and Laurence Curtet Download PDF (451.3 KB) View HTML

Characterization of hydraulic habitat and retention across different channel types; introducing a new field-based technique V. S. Milner and D. J. Gilvear Download PDF (455.6 KB) View HTML

Patagonian ostracods as indicators of climate-related hydrological variables: implications for paleoenvironmental reconstructions in Southern South America Josefina Ramón Mercau, Cecilia Laprida, Julieta Massaferro, Michela Rogora and Gabriele Tartari, et al. Download PDF (739.3 KB) View HTML

Previous – Top – Next

VOLUME 695, OCTOBER 2012 Website

Research articles

Use of Algae for Monitoring Rivers Guest Editors: Luc Ector , Daša Hlúbiková and Lucien Hoffmann

Preface: Use of algae for monitoring rivers Luc Ector, Daša Hlúbiková and Lucien Hoffmann Download PDF (147.8 KB)View HTML

Changing approaches to monitoring during the period of the ‘Use of Algae for Monitoring Rivers’ symposia Brian A. Whitton Download PDF (210.0 KB) View HTML

Ultrastructure and function of stalks of the diatom Didymosphenia geminata Marina Aboal, Sergio Marco, Elena Chaves, Iván Mulero and Alfonsa García-Ayala

Aquaculture Journals Page: 204 of 331

Aquaculture Journals – Table of Contents

Download PDF (660.0 KB) View HTML

Phosphorus regulates stream injury by filamentous green algae, DO, and pH with thresholds in responses R. Jan Stevenson, Brian J. Bennett, Donielle N. Jordan and Ron D. French Download PDF (608.4 KB) View HTML

Is the biological classification of benthic diatom communities concordant with ecotypes? Elisabet Tornés, Manel Leira and Sergi Sabater Download PDF (2.1 MB) View HTML

The application of oligonucleotide probes and microarrays for the identification of freshwater diatoms Marco Berzano, Stefania Marcheggiani, Silvia Rombini and Roberto Spurio Download PDF (861.2 KB) View HTML Supplemental

Fluorescence as a probe for physiological integrity of freshwater cyanobacteria Lucyna M. Wlodarczyk, Christian Moldaenke and Leszek Fiedor Download PDF (297.8 KB) View HTML

Patterns of biofilm formation in two streams from different bioclimatic regions: analysis of microbial community structure and metabolism Joan Artigas, Katharina Fund, Silke Kirchen, Soizic Morin and Ursula Obst, et al. Download PDF (324.7 KB) View HTML

Open Access The influence of substrates and physicochemical factors on the composition of diatom assemblages in karst springs and their applicability in water-quality assessment Agata Z. Wojtal and Łukasz Sobczyk Download PDF (344.4 KB) View HTML

Identification versus counting protocols as sources of uncertainty in diatom- based ecological status assessments Maria Kahlert, Martyn Kelly, Raino-Lars Albert, Salomé F. P. Almeida and Tomáš Bešta, et al. Download PDF (446.6 KB) View HTML Supplemental

Improvement of the ecological water qualification system of rivers based on the first results of the Hungarian phytobenthos surveillance monitoring Gábor Várbíró, Gábor Borics, Béla Csányi, Gizella Fehér and István Grigorszky, et al. Download PDF (507.9 KB) View HTML

Developing a diatom monitoring network in an urban river-basin: initial assessment and site selection Ingrid Jüttner, P. James Chimonides and Steve J. Ormerod Download PDF (859.4 KB) View HTML

Diatoms from Alto Adige/Südtirol (Northern Italy): characterization of assemblages and their application for biological quality assessment in the context of the Water Framework Directive Maria Elena Beltrami, Francesca Ciutti, Cristina Cappelletti, Birgit Lösch and Renate Alber, et al. Download PDF (717.2 KB) View HTML Supplemental

Aquaculture Journals Page: 205 of 331

Aquaculture Journals – Table of Contents

Identifying reference benthic diatom communities in an agricultural watershed (Guadiana River, SW Spain) Gemma Urrea-Clos and Sergi Sabater Download PDF (522.5 KB) View HTML

DIATMOD: diatom predictive model for quality assessment of Portuguese running waters Salomé F. P. Almeida and Maria J. Feio Download PDF (462.8 KB) View HTML

Are diatom diversity indices reliable monitoring metrics? Saúl Blanco, Cristina Cejudo-Figueiras, Loïc Tudesque, Eloy Bécares and Lucien Hoffmann, et al. Download PDF (444.0 KB) View HTML

Benthic diatom assemblages and their response to human stress in small-sized volcanic-siliceous streams of central Italy (Mediterranean eco-region) Valentina Della Bella, Giorgio Pace, Mariachiara Barile, Andrea Zedde and Camilla Puccinelli, et al. Download PDF (345.1 KB) View HTML

Can season interfere with diatom ecological quality assessment? Carmen L. Elias, Natividade Vieira, Maria J. Feio and Salomé F. P. Almeida Download PDF (368.6 KB) View HTML

Alpine freshwater ecosystems in a protected area: a source of diatom diversity Elisa Falasco, Luc Ector, Elisabetta Ciaccio, Lucien Hoffmann and Francesca Bona Download PDF (889.0 KB) View HTML

Effect of streamlining taxa lists on diatom-based indices: implications for intercalibrating ecological status Martyn G. Kelly and Luc Ector Download PDF (280.4 KB) View HTML

Ecological assessment of Portuguese reservoirs based on littoral epilithic diatoms Maria Helena Novais, Saúl Blanco, Cristina Delgado, Manuela Morais and Lucien Hoffmann, et al. Download PDF (383.7 KB) View HTML

Nutrients and light effects on stream biofilms: a combined assessment with CLSM, structural and functional parameters Lorenzo Proia, Anna M. Romaní and Sergi Sabater Download PDF (725.6 KB) View HTML

Analysis of the seasonal dynamics of river phytoplankton based on succession rate indices for key event identification Roman E. Romanov and Vladimir V. Kirillov Download PDF (418.1 KB) View HTML

Periphytic algal assemblages along environmental gradients in the rivers of the Lake Ladoga basin, Northwestern Russia: implication for the water quality assessment Alexander G. Rusanov, Elena V. Stanislavskaya and Éva Ács Download PDF (525.2 KB) View HTML

Aquaculture Journals Page: 206 of 331

Aquaculture Journals – Table of Contents

Plankton composition and water chemistry in the mixing zone of the Selenga River with Lake Baikal Larisa M. Sorokovikova, Galina I. Popovskaya, Olga I. Belykh, Irina V. Tomberg and Svetlana Yu. Maksimenko, et al. Download PDF (753.3 KB) View HTML

Epilithic diatoms as indicators in tropical African rivers (Lake Victoria catchment) Ludwig Triest, Henri Lung’ayia, George Ndiritu and Abebe Beyene Download PDF (646.7 KB) View HTML

Previous – Top – Next

VOLUME 696, OCTOBER 2012 Website

Research articles

Drivers and stressors of freshwater biodiversity patterns across different ecosystems and scales: a review Sonja Stendera, R. Adrian, N. Bonada, M. Cañedo-Argüelles and B. Hugueny, et al. Download PDF (608.5 KB) View HTML

Hydromorphological complexity as a driver of the diversity of benthic invertebrate communities in the Czarny Dunajec River, Polish Carpathians Bartłomiej Wyżga, Paweł Oglęcki, Artur Radecki-Pawlik, Tomasz Skalski and Joanna Zawiejska Download PDF (644.6 KB) View HTML

Adaptation, phenology and disturbance of macroinvertebrates in temporary water bodies Gwendolin Porst, Owen Naughton, Laurence Gill, Paul Johnston and Kenneth Irvine Download PDF (358.4 KB) View HTML

Bacterially mediated iron cycling and associated biogeochemical processes in a subtropical shallow coastal aquifer: implications for groundwater quality Chaofeng Lin, Eloise I. Larsen, Genevieve R. Larsen, Malcolm E. Cox and James J. Smith Download PDF (533.3 KB) View HTML Supplemental

Adaptation of submerged macrophytes to both water depth and flood intensity as revealed by their mechanical resistance Guorong Zhu, Wei Li, Meng Zhang, Leyi Ni and Shengrui Wang Download PDF (890.3 KB) View HTML Supplemental

How equally sized piscivorous birds and fish sharing common food resources may reduce possible feeding interactions between them? Antoni Amirowicz and Robert Gwiazda Download PDF (380.6 KB) View HTML

Fish abundance and species richness across an estuarine–freshwater ecosystem in the Neotropics Priscila M. de Moura, João P. Vieira and Alexandre M. Garcia Download PDF (945.2 KB) View HTML

On the way to overcome some ecological riddles of forested headwaters

Aquaculture Journals Page: 207 of 331

Aquaculture Journals – Table of Contents

Liliana García and Isabel Pardo Download PDF (409.7 KB) View HTML Supplemental

Hierarchical large-scale to local-scale influence of abiotic factors in summer- fragmented Mediterranean rivers: structuring effects on fish distributions, assemblage composition and species richness R. Morán-López, J. L. Pérez-Bote, E. Da Silva and A. B. Perales Casildo Download PDF (445.5 KB) View HTML

Epiphyte response to in situ manipulation of nutrient availability and fish presence in a Posidonia oceanica (L.) Delile meadow Inés Castejón-Silvo, Jorge Terrados, Marta Domínguez and Beatriz Morales-Nin Download PDF (385.2 KB) View HTML

Multi-scale segregations and edaphic determinants of marsh plant communities in a western Pacific Qiang He, Fanyi Chen, Baoshan Cui and Yuan An Download PDF (568.9 KB) View HTML Supplemental

Littoral age 0+ fish distribution in relation to multi-scale spatial heterogeneity of a deep-valley reservoir Michal Kratochvíl, Tomáš Mrkvička, Mojmír Vašek, Jiří Peterka and Martin Čech, et al. Download PDF (641.1 KB) View HTML

Determination of total phosphorus in lake sediments M. L. Ostrofsky Download PDF (199.4 KB) View HTML

An indirect effect of biological invasions: the effect of zebra mussel fouling on parasitisation of unionid mussels by bitterling fish Milan Vrtílek and Martin Reichard Download PDF (236.0 KB) View HTML

Previous – Top – Next

VOLUME 697, NOVEMBER 2012 Website

Research articles Limnology and Aquatic Birds: Monitoring, Modelling and Management Guest Editors: Francisco A. Comín and Stuart H. Hurlbert

Preface: Perspectives on progress in ornitholimnology Francisco A. Comín and Stuart H. Hurlbert Download PDF (174.2 KB) View HTML

Carrying capacity of wetlands for massive migratory waterfowl Guangwei Huang and Masahiko Isobe Download PDF (812.5 KB) View HTML

Effects of water level on waterbird abundance and diversity along the middle section of the Danube River Sándor Faragó and Katalin Hangya Download PDF (267.5 KB) View HTML

Waterbird mortality in hypersaline environments: the Wyoming trona ponds

Aquaculture Journals Page: 208 of 331

Aquaculture Journals – Table of Contents

Joseph R. Jehl Jr., Annette E. Henry and Judy St. Leger Download PDF (403.8 KB) View HTML

Exclosure study on the exploitation of macrophytes by summering and moulting waterbirds at Lower Lake Constance Anja Matuszak, Martin Mörtl, Petra Quillfeldt and Hans-Günther Bauer Download PDF (425.1 KB) View HTML

Grazing effects of Black Swans Cygnus atratus (Latham) on a seasonally flooded coastal wetland of eastern Australia Adam N. Smith, Karl A. Vernes and Hugh A. Ford Download PDF (636.5 KB) View HTML

Invertebrate food sources for waterbirds provided by the reconstructed wetland of Nyirkai-Hany, northwestern Hungary Zsófia Horváth, Márta Ferenczi, Arnold Móra, Csaba Ferenc Vad and András Ambrus, et al. Download PDF (490.4 KB) View HTML Supplemental

Trophic relationships of two species of grebe on a prairie lake based on stable isotope analysis Jennifer L. Newbrey, Cynthia A. Paszkowski and Beverly A. Gingras Download PDF (477.8 KB) View HTML

Fish–duck interactions in boreal lakes in Finland as reflected by abundance correlations Veli-Matti Väänänen, Petri Nummi, Hannu Pöysä, Martti Rask and Kari Nyberg Download PDF (323.1 KB) View HTML

Warming winter effects, fat store accumulation and timing of spring departure of Greenland White-fronted Geese Anser albifrons flavirostris from their winter quarters Anthony D. Fox and Alyn Walsh Download PDF (303.2 KB) View HTML

Earlier spring staging in Iceland amongst Greenland White-fronted Geese Anser albifrons flavirostris achieved without cost to refuelling rates Anthony D. Fox, Hugh Boyd, Alyn J. Walsh, David A. Stroud and Jens Nyeland, et al. Download PDF (324.0 KB) View HTML

Abundances of waterbird species on lakes in Argentine Patagonia as a function of season, lake size and the presence of mink Moisés Pescador, Soledad Díaz and Salvador Peris Download PDF (541.0 KB) View HTML

Influence of long-term climatic changes on breeding of the Chilean flamingo in Mar Chiquita, Córdoba, Argentina Enrique H. Bucher and Erio Curto Download PDF (378.1 KB) View HTML

Variability in habitat value of commercial salt production ponds: implications for waterbird management and tidal marsh restoration planning Nicole D. Athearn, John Y. Takekawa, Jill D. Bluso-Demers, Joel M. Shinn and L. Arriana Brand, et al. Download PDF (2.6 MB) View HTML Previous – Top – Next

Aquaculture Journals Page: 209 of 331

Aquaculture Journals – Table of Contents

IIInnndddiiiaaannn JJJooouuurrrnnnaaalll ooofff FFFiiissshhheeerrriiieeesss

VOLUME 59, ISSUE 2, 2012 Website

Research articles

Fisheries and management status of Doyang Reservoir, Nagaland, north-east India PDF N. Subenthung Odyuo, T. S. Nagesh

Fishery, biology and population characteristics of longtail tuna, Thunnus tonggol (Bleeker, 1851) caught along the Indian coast PDF E. M. Abdussamad

Temporal pattern of fish production in a microtidal tropical estuary in the south-west coast of India PDF S Bijoy Nandan, PR Jayachandran, OK Sreedevi

Spatio-temporal analysis and impact assessment of trawl bycatch of Karnataka to suggest operation based management options PDF Dineshbabu A.P., Sujitha Thomas, E.V Radhakrishnan

Fishery, biology and stock structure of skipjack tuna, Katsuwonus pelamis (Linnaeus, 1758) exploited from Indian waters PDF Koya K P Said

Reproductive biology of the endemic ornamental barb, Puntius pookodensis Anna Mercy and Eapen Jacob 2007, from the Western Ghats of India PDF Seena Augustine

Assessment of the fishery and stock of striped bonito, Sarda orientalis (Temminck and Schlegel, 1844) along Kerala coast with a general description of its fishery from Indian coast PDF M Sivadas

Diversity, distribution and abundance of oceanic resources around Andaman and Nicobar Islands PDF Sajeevan Moosamikandy, Rajashree B Sanadi

Satellite based potential fishing zone (PFZ) advisories - acceptance levels and benefits derived by the user community along the Kerala coast PDF Preetha G Nair, Narayana Pillai

Fishery, biology and dynamics of dogtooth tuna, Gymnosarda unicolor (Rüppell, 1838) exploited from Indian seas

Aquaculture Journals Page: 210 of 331

Aquaculture Journals – Table of Contents

PDF K K Joshi

Influence of lunar phases on fish landings by gillnetters and trawlers PDF Linoy Libini Cheruvathur, AJMAL KHAN Syed

Studies on the growth of Otolithes ruber (Bloch & Schneider, 1801), Johnius carutta Bloch, 1793 and Pennahia macrophthalmus (Bleeker, 1850) from Paradeep coast, Orissa, India PDF Sushanta Kumar Chakraborty

Fishery, population dynamics and stock structure of frigate tuna Auxis thazard (Lacepede, 1800) exploited from Indian waters PDF Shubha Deep Ghosh

Internal anatomy of the terminal ampoule of monoceros (Fabricius, 1798) and its role in spermatophore formation PDF Joice Abraham, Mary K Manisseri, Sanil N.K

Description of a new sand lance species, Bleekeria murtii (: Ammodytidae) from India PDF K K Joshi, P. U Zachariah, P Kanthan

Effect of nutrient level on phytoplankton population in zero water exchange shrimp culture farms PDF Saraswathy Ramamoorthy, Muralidhar Moturi, Ravichandran Pitchaiyappan, Alphis Gitanand Ponniah, Panigrahi Akshaya, Kailasam Muniyandi, Nagavel Arunachalam

Development of live feed enrichment product for marine fish larviculture PDF P Vijayagopal

Evaluation of the marine copepod Oithona rigida Giesbrecht as live feed for larviculture of Asian seabass Lates calcarifer Bloch with special reference to nutritional value PDF Perumal Santhanam

Growth and reproductive performance of African giant catfish, Heterobranchus longifilis Valenciennes 1840 broodstock on ascorbic acid supplementation PDF olabode thomas adebayo, Femi John Fawole

Comparative evaluation of body composition of hilsa, Tenualosa ilisha (Hamilton, 1822) in different size groups with special reference to fatty acid, in Hooghly estuarine system, West Bengal, India PDF Ashim Nath Kumar, Bidita Banerjee

Aquaculture Journals Page: 211 of 331

Aquaculture Journals – Table of Contents

Biochemical changes in liver and muscle of the cichlid, Oreochromis mossambicus (Peters, 1852) exposed to sub-lethal concentration of mercuric chloride PDF Roy George K, Malini Nair, A

Bacterial flora of farmed mud crab, Scylla serrata (Forskal, 1775) and farm environments in Kerala, India PDF Kuttanappilly Velayudhan elayadom Lalitha, Thampuran Nirmala

Prevalence, distribution and drug resistance of motile aeromonads in freshwater ornamental fishes PDF Mohamed Hatha Hatha M Abdulla, Nifty John

Note

Observations on broodstock maintenance, breeding and early larval development of the common spider conch Lambis lambis (Linnaeus, 1758) in captivity PDF I. Jagadis, K. Shanmugasundaram, J. Padmanathan

Lower size at maturation reduces somatic yield in pond reared stunted yearlings of rohu Labeo rohita (Hamilton) PDF Charan Ravi, Suresh Babu Padinhatepurayil, Sabir Hussaine Razvi, Venugopal Gundaboina, Anuraj Anirudhan Previous – Top – Next

Aquaculture Journals Page: 212 of 331

Aquaculture Journals – Table of Contents

IIInnnttteeerrrnnnaaatttiiiooonnnaaalll JJJooouuurrrnnnaaalll ooofff AAAqqquuuaaatttiiiccc SSSccciiieeennnccceee

VOLUME 3, ISSUE 2, 2012 Website

Research articles

-Hanne Dalsgaard Nielsen and Søren Laurentius Nielsen; Effects of temperature and salinity on germling development and fitness in the brown macroalga Fucus serratus L.; 3-12.

-Peranandam Revathi, Palanisamy Iyapparaj, Natesan Munuswamy and Muthukalingan Krishnan; Vitellogenesis during the ovarian development in freshwater female prawn Macrobrachium rosenbergii (De Man); 13-27.

-Patrick Oduor Orwa, Phillip Raburu, James Njiru and Joash Barack Okeyo-Owuor; Human Influence on macroinvertebrate community structure within Nyando wetlands, Kenya; 28-48.

-Kayode Olurin, James Okafor, Abimbola Alade, Raheem Asiru, John Ademiluwa, Kafilat Owonifari and Oluwatosin Oronaye; Helminth Parasites of Sarotherodon galilaeus and Tilapia zillii (Pisces: Cichlidae) from River Oshun, south-west Nigeria; 49-55.

-Indrani sarkar, Arnab Basu, Siddhartha Dutta and Sheela Roy; Male mating tactics and mating activity in a fresh water prawn, Macrobrachium dayanum (Henderson, 1893) Paleomonidae; Caridae; 56-70.

-Seyed Mahdi Banan Khojasteh; The morphology of the post-gastric alimentary canal in teleost fishes: a brief review; 71-88.

-Padmaja Jayaprasad Pradeep, Thekkeparambil Chandrabose Srijaya, Aneesh Bahuleyan and Alessino Papini; Can sterility through Triploidy induction make an impact on Tilapia industry?; 89-96

Previous – Top – Next

Aquaculture Journals Page: 213 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff AAAppppppllliiieeeddd IIIccchhhttthhhyyyooolllooogggyyy

VOLUME 28, ISSUE 4, AUGUST 2012 Website

Research articles

Evidence of autumn spawning in Suwannee River Gulf sturgeon, Acipenser oxyrinchus desotoi (Vladykov, 1955) (pages 489–495) M. T. Randall and K. J. Sulak Abstract Full Article (HTML) PDF(285K) References

Natural growth and diet of known-age pallid sturgeon (Scaphirhynchus albus) early life stages in the upper Missouri River basin, Montana and North Dakota (pages 496–504) P. J. Braaten, D. B. Fuller, R. D. Lott, T. M. Haddix, L. D. Holte, R. H. Wilson, M. L. Bartron, J. A. Kalie, P. W. DeHaan, W. R. Ardren, R. J. Holm and M. E. Jaeger Abstract Full Article (HTML) PDF(434K) References

Tank spawning of first generation domestic green sturgeon (pages 505–511) J. P. Van Eenennaam, J. Linares-Casenave and S. I. Doroshov Abstract Full Article (HTML) PDF(820K) References

A note on the fecundity of pallid sturgeon (pages 512–515) S. G. George, W. T. Slack and J. J. Hoover Abstract Full Article (HTML) PDF(153K) References

Population structure of sablefish Anoplopoma fimbria using genetic variability and geometric morphometric analysis (pages 516–523) M. A. Tripp-Valdez, F. J. García-de-León, H. Espinosa-Pérez and G. Ruiz-Campos Abstract Full Article (HTML) PDF(563K) References

The use of otolith shape and morphometry for identification and size-estimation of five wrasse species in predator-prey studies (pages 524–530) F. Škeljo and J. Ferri Abstract Full Article (HTML) PDF(324K) References

Influence of turbidity and passage rate on the efficiency of an infrared counter to enumerate and measure riverine fish (pages 531–536) L. J. Baumgartner, M. Bettanin, J. McPherson, M. Jones, B. Zampatti and K. Beyer Abstract Full Article (HTML) PDF(337K) References

Alternative codends to improve the size selectivity for nylon shrimp (Heterocarpus reedi) and yellow squat lobster (Cervimunida johni) off the Chilean coast (pages 537–544) D. Queirolo, C. F. Hurtado, M. Ahumada, E. Gaete, M. C. Soriguer and K. Erzini Abstract Full Article (HTML) PDF(323K) References

Fatty acid profile and proximate composition of fillets from Engraulis encrasicholus, Mullus barbatus, Merluccius merluccius and Sarda sarda caught in Tyrrhenian, Adriatic and Ionian seas (pages 545–552) A. Roncarati, G. Brambilla, A. Meluzzi, A. L. Iamiceli, R. Fanelli, I. Moret, A. Ubaldi, R. Miniero, F. Sirri, P. Melotti and A. di Domenico Abstract Full Article (HTML) PDF(242K) References

Aquaculture Journals Page: 214 of 331

Aquaculture Journals – Table of Contents

Tricaine methane-sulfonate (MS-222) application in fish anaesthesia (pages 553– 564) N. Topic Popovic, I. Strunjak-Perovic, R. Coz-Rakovac, J. Barisic, M. Jadan, A. Persin Berakovic and R. Sauerborn Klobucar Abstract Full Article (HTML) PDF(229K) References

Life cycle of a small endemic goby (Family: Gobiidae) in Lake Pamvotis, northwestern Greece (pages 565–571) C. Gkenas and I. Leonardos Abstract Full Article (HTML) PDF(455K) References

The role of a freshwater tidal area with controlled reduced tide as feeding habitat for European eel (Anguilla anguilla, L.) (pages 572–581) C. Van Liefferinge, A. Dillen, C. Ide, A. Herrel, C. Belpaire, A. Mouton, E. de Deckere and P. Meire Abstract Full Article (HTML) PDF(425K) References

Risk assessment model for the introduction of non-native freshwater fish into New Zealand (pages 582–589) D. K. Rowe and T. Wilding Abstract Full Article (HTML) PDF(345K) References

Shoreline distribution and parasite infection of black-striped pipefish Syngnathus abaster Risso, 1827 in the lower River Danube (pages 590–596) M. Ondračková, I. Slováčková, T. Trichkova, M. Polačik and P. Jurajda Abstract Full Article (HTML) PDF(308K) References

Age, growth and length–weight relationships of Pinna bicolor Gmelin (Bivalvia: Pinnidae) in the seagrass beds of Sungai Pulai Estuary, Johor, Peninsular Malaysia (pages 597–600) M. H. Idris, A. Arshad, S. M. N. Amin, S. B. Japar, S. K. Daud, A. G. Mazlan, M. S. Zakaria and F. M. Yusoff Abstract Full Article (HTML) PDF(387K) References

Gonadosomatic index-based size at first sexual maturity of the catfish Eutropiichthys vacha (Hamilton, 1822) in the Ganges River (NW Bangladesh) (pages 601–605) M. Y. Hossain, M. A. S. Jewel, L. Nahar, M. Mosaddequr Rahman, A. Naif and J. Ohtomi Abstract Full Article (HTML) PDF(233K) References

Experimental acoustic telemetry experiment reveals strong site fidelity during the sexual resting period of wild brown meagre, Sciaena umbra (pages 606–611) J. Alós and M. Cabanellas-Reboredo Abstract Full Article (HTML) PDF(438K) References

The rate and causes of the loss of gill and trammel nets in Iskenderun Bay (north-eastern Mediterranean) (pages 612–616) C. E. Ozyurt, S. Mavruk and V. B. Kiyaga Abstract Full Article (HTML) PDF(346K) References

Use of shape analysis in the investigation of disputable meristic characters for Ameiurus melas (Rafinesque, 1820) and Ameiurus nebulosus (Lesueur, 1819) (pages 617–622) G. Cvijanović, M. Cvijanović, I. Jarić and M. Lenhardt

Aquaculture Journals Page: 215 of 331

Aquaculture Journals – Table of Contents

Abstract Full Article (HTML) PDF(916K) References

Feeding of the Brazilian sharpnose shark Rhizoprionodon lalandii (Müller & Henle, 1839) from southern Brazil (pages 623–627) H. Bornatowski, M. R. Heithaus, V. Abilhoa and M. F. M. Corrêa Abstract Full Article (HTML) PDF(287K) References

Histomorphologic hepatic features and growth performances of juvenile Senegalese sole (Solea senegalensis) fed isogenertic practical diets with variable protein/lipid levels (pages 628–632) L. Mandrioli, R. Sirri, P. P. Gatta, F. Morandi, G. Sarli, L. Parma, R. Fontanillas and A. Bonaldo Abstract Full Article (HTML) PDF(529K) References

New records expand the known southern most range of Rajella kukujevi (Elasmobranchii, Rajidae) in the North-Eastern Atlantic (Cantabrian Sea) (pages 633–636) C. Rodríguez-Cabello, J. C. Arronte, F. Sánchez and M. Pérez Abstract Full Article (HTML) PDF(342K) References

First confirmed record of lozano’s goby, Pomatoschistus lozanoi (de Buen, 1923) (Teleostei: Gobiidae), in the Elbe estuary (pages 637–640) D. Eick Abstract Full Article (HTML) PDF(365K) References

The oldest estimated age for roughtail stingray [Dasyatis centroura (Mitchill, 1815)] from the Mediterranean Sea (pages 641–642) N. Başusta and J. A. Sulikowski Abstract Full Article (HTML) PDF(224K) References

First record of a gravid female and neonate of the Lusitanian cownose ray, Rhinoptera marginata, from the eastern Mediterranean Sea (pages 643–644) A. Başusta, E. I. Ozer, J. A. Sulikowski and N. Başusta Abstract Full Article (HTML) PDF(144K) References

Record of the Atlantic tripletail, Lobotes surinamensis (Bloch, 1790) in the Bay of Izmir, northern Aegean Sea (pages 645–646) O. Akyol and A. Kara Abstract Full Article (HTML) PDF(146K) References

Bacterial diversity of the upper and lower intestines of the common carp (Cyprinus carpio Linnaeus, 1758) reared in an indoor tank (pages 647–648) H. Sugita and H. Mizuki Abstract Full Article (HTML) PDF(151K) References

On the occurrence of Odontostomops normalops (Aulopiformes: Evermannellidae) in the Bay of Biscay (north-eastern Atlantic) (pages 649–651) J. C. Arronte, R. Bañón, F. Sánchez and A. Serrano Abstract Full Article (HTML) PDF(178K) References

Occurrence of the Atlantic species, Pisodonophis semicinctus (Osteichthyes: Ophichthidae), along the Mediterranean coast (pages 652–654) P. Bodilis, A. Cheminée, R. Miniconi, H. Arceo and P. Francour Abstract Full Article (HTML) PDF(244K) References

Aquaculture Journals Page: 216 of 331

Aquaculture Journals – Table of Contents

Using length–frequency analysis to determine the age of Anguilla anguilla (L.) (pages 655–657) V. Mazel, F. Charrier, T. Robinet and P. Laffaille Abstract Full Article (HTML) PDF(204K) References

Length–weight relationships of nine fish species from Xingkai (Khanka) Lake, Heilongjiang, China (pages 658–659) M. H. Liu, Z. J. Meng and H. X. Yu Abstract Full Article (HTML) PDF(131K) References

Length–weight and length–length relationships for some Yangtze River fishes in Tian-e-zhou Oxbow, China (pages 660–662) T. Wang, H.-S. Wang, G.-W. Sun, D. Huang and J.-H. Shen Abstract Full Article (HTML) PDF(143K) References

Length–weight relationships for 13 fish species collected in the Doñana marshlands (Guadalquivir estuary, SW Spain) (pages 663–664) R. Moreno-Valcárcel, F. J. Oliva-Paterna, C. Arribas and C. Fernández-Delgado Abstract Full Article (HTML) PDF(137K) References

Length adjustment of larval and early-juvenile cod (Gadus morhua) after up to 3 years of preservation in alcohol (pages 665–666) D. P. Fey Abstract Full Article (HTML) PDF(202K) References

Length–weight relationships of sixteen freshwater fishes from the Hacha River and its tributaries (Amazon Basin, Caquetá, Colombia) (pages 667–670) S. Gaspar, I. Tobes, R. Miranda, P. M. Leunda and M. Peláez Article first published online: 6 FEB 2012 | DOI: 10.1111/j.1439-0426.2011.01928.x Abstract Full Article (HTML) PDF(158K) References

Weight–length relationships of mangrove fishes from Bahía de La Paz, Gulf of California, Mexico (pages 671–672) X. G. Moreno Sánchez, S. E. Lluch-Cota, L. Hernández-Olalde, F. López Rasgado and L. A. Abitia-Cardenas Abstract Full Article (HTML) PDF(145K) References

Length–weight, length–length relationships and feeding habits of wild Indus Mahseer, Tor macrolepis, from Attock, Pakistan (pages 673–676) K. Pervaiz, Z. Iqbal, M. R. Mirza, M. N. Javed, M. Naeem and A. Ishtiaq Abstract Full Article (HTML) PDF(161K) References

Length–weight and length–length relationships for 10 species of scorpionfishes (Scorpaenidae) on the south coast of Korea (pages 677–679) G. W. Baeck, J. M. Jeong, Y. M. Yeo, S.-H. Huh and J. M. Park Abstract Full Article (HTML) PDF(145K) References

Previous – Top – Next

Aquaculture Journals Page: 217 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff AAAppppppllliiieeeddd MMMiiicccrrrooobbbiiiooolllooogggyyy

VOLUME113, PART 1, JULY 2012 Website

Research articles

Review

Cronobacter species (formerly known as Enterobacter sakazakii) in powdered infant formula: a review of our current understanding of the biology of this bacterium (pages 1–15) Q.Q. Yan, O. Condell, K. Power, F. Butler, B.D. Tall and S. Fanning Abstract Full Article (HTML) PDF(286K) References

Characterization of antimicrobial resistance of Pseudomonas aeruginosa isolated from canine infections (pages 16–23) D. Lin, S.L. Foley, Y. Qi, J. Han, C. Ji, R. Li, C. Wu, J. Shen and Y. Wang Article first published online: 3 MAY 2012 | DOI: 10.1111/j.1365-2672.2012.05304.x Abstract Full Article (HTML) PDF(205K) References

Pseudomonas M162 confers protection against rainbow trout fry syndrome by stimulating immunity (pages 24–35) T.L. Korkea-aho, A. Papadopoulou, J. Heikkinen, A. von Wright, A. Adams, B. Austin and K.D. Thompson 2672.2012.05325.x Abstract Full Article (HTML) PDF(636K) References

Biotechnology

Use of response surface methodology to optimize protease synthesis by a novel strain of Bacillus sp. isolated from Portuguese sheep wool (pages 36–43) A.C. Queiroga, M.E. Pintado and F.X. Malcata Abstract Full Article (HTML) PDF(968K) References

Characterization and emulsifying property of a novel bioemulsifier by Aeribacillus pallidus YM-1 (pages 44–51) C. Zheng, Z. Li, J. Su, R. Zhang, C. Liu and M. Zhao 2672.2012.05313.x Abstract Full Article (HTML) PDF(237K) References

Isoprene hydrocarbons production upon heterologous transformation of Saccharomyces cerevisiae (pages 52–65) S.-Y. Hong, A.S. Zurbriggen and A. Melis 2672.2012.05319.x Abstract Full Article (HTML) PDF(586K) References Supporting Information

Effectiveness of qPCR permutations, internal controls and dilution as means for minimizing the impact of inhibition while measuring Enterococcus in environmental waters (pages 66–75) Y. Cao, J.F. Griffith, S. Dorevitch and S.B. Weisberg Abstract Full Article (HTML) PDF(179K) References Supporting Information

Food/Beverage Microbiology

Aquaculture Journals Page: 218 of 331

Aquaculture Journals – Table of Contents

Functional analysis to identify genes in wine yeast adaptation to low- temperature fermentation (pages 76–88) Z. Salvadó, R. Chiva, N. Rozès, R. Cordero-Otero and J.M. Guillamón 2672.2012.05308.x Abstract Full Article (HTML) PDF(448K) References

Cleaning and decontamination efficacy of wiping cloths and silver dihydrogen citrate on food contact surfaces (pages 89–95) S.M. Masuku, D. Babu, E.M. Martin, O.K. Koo, C.A. O’Bryan, P.G. Crandall and S.C. Ricke 2672.2012.05318.x Abstract Full Article (HTML) PDF(487K) References Request Permissions

A comparison of methods used to extract bacterial DNA from raw milk and raw milk cheese (pages 96–105) L. Quigley, O. O’Sullivan, T.P. Beresford, R. Paul Ross, G.F. Fitzgerald and P.D. Cotter Abstract Full Article (HTML) PDF(251K) References

Rapid and simple DNA extraction method for the detection of enterotoxigenic Staphylococcus aureus directly from food samples: comparison of PCR and LAMP methods (pages 106–113) N. Sowmya, M.S. Thakur and H.K. Manonmani 2672.2012.05315.x Abstract Full Article (HTML) PDF(350K) References

New insights for rapid evaluation of bactericidal activity: a semi-automated bioluminescent ATP assay (pages 114–125) L. Aragonès, C. Escudé, P. Visa, L. Salvi and L. Mocé-Llivina 2672.2012.05320.x Abstract Full Article (HTML) PDF(280K) References

Physiology

Quorum sensing activity in Ophiostoma ulmi: effects of fusel oils and branched chain amino acids on yeast-mycelial dimorphism (pages 126–134) A. Berrocal, J. Navarrete, C. Oviedo and K.W. Nickerson 2672.2012.05317.x Abstract Full Article (HTML) PDF(233K) References

Plant Microbiology/Plant Health Microbiology

Sodium citrate induces apoptosis in biocontrol yeast Cryptococcus laurentii (pages 135–142) Y.-s. Wang and Z.-y. Wang 2672.2012.05312.x Abstract Full Article (HTML) PDF(1036K) References

Pre- and Probiotics/Intestinal Microbiology

Microbial production of volatile sulphur compounds in the large intestine of pigs fed two different diets (pages 143–154) H.V. Poulsen, B.B. Jensen, K. Finster, C. Spence, T.R. Whitehead, M.A. Cotta and N. Canibe Abstract Full Article (HTML) PDF(267K) References

Aquaculture Journals Page: 219 of 331

Aquaculture Journals – Table of Contents

Orally administered heat-killed Lactobacillus gasseri TMC0356 alters respiratory immune responses and intestinal microbiota of diet-induced obese mice (pages 155–162) K. Yoda, F. He, K. Miyazawa, M. Kawase, A. Kubota and M. Hiramatsu 2672.2012.05316.x Abstract Full Article (HTML) PDF(569K) References

Evaluation of Leuconostoc mesenteroides YML003 as a probiotic against low- pathogenic avian influenza (H9N2) virus in chickens (pages 163–171) B.J. Seo, I.A. Rather, V.J.R. Kumar, U.H. Choi, M.R. Moon, J.H. Lim and Y.H. Park 2672.2012.05326.x Abstract Full Article (HTML) PDF(353K) References Supporting Information

Public Health Microbiology

Distribution and survival of Vibrio vulnificus genotypes in postharvest Gulf Coast (USA) oysters under refrigeration (pages 172–180) R.R. Wood and C.R. Arias 2672.2012.05306.x Abstract Full Article (HTML) PDF(1125K) References

Bactericidal activity and oral pathogen inactivation by electromagnetic wave irradiation (pages 181–191) H. Yumoto, T. Tominaga, K. Hirao, T. Kimura, K. Takahashi, T. Sumitomo, N. Bando and T. Matsuo Abstract Full Article (HTML) PDF(377K) References

Influence of plant polyphenols and medicinal plant extracts on antibiotic susceptibility of Escherichia coli (pages 192–199) G. Smirnova, Z. Samoilova, N. Muzyka and O. Oktyabrsky 2672.2012.05322.x Abstract Full Article (HTML) PDF(218K) References

Evaluation of four protocols for the detection and isolation of thermophilic Campylobacter from different matrices (pages 200–208) M. Ugarte-Ruiz, S. Gómez-Barrero, M.C. Porrero, J. Álvarez, M. García, M.C. Comerón, T.M. Wassenaar and L. Domínguez 2672.2012.05323.x Abstract Full Article (HTML) PDF(299K) References

Detection and characterization of Shigella species isolated from food and human stool samples in Nabeul, Tunisia, by molecular methods and culture techniques (pages 209–222) W. Mokhtari, S. Nsaibia, D. Majouri, A. Ben Hassen, A. Gharbi and M. Aouni 2672.2012.05324.x Abstract Full Article (HTML) PDF(437K) References

Previous – Top – Next

VOLUME113, PART 2, AUGUST 2012 Website

Research articles

Reviews

Aquaculture Journals Page: 220 of 331

Aquaculture Journals – Table of Contents

Mycobacterium avium complex – the role of potable water in disease transmission (pages 223–232) H. Whiley, A. Keegan, S. Giglio and R. Bentham Abstract Full Article (HTML) PDF(133K) References Supporting Information

Prolidase function in proline metabolism and its medical and biotechnological applications (pages 233–247) R.L. Kitchener and A.M. Grunden Abstract Full Article (HTML) PDF(336K) References

Original Articles

Generation of a temperature-sensitive Edwardsiella tarda mutant and its potential as a prophylactic vaccine in olive flounder (Paralichthys olivaceus) (pages 248–255) S.H. Choi, S.R. Kwon and K.H. Kim Abstract Full Article (HTML) PDF(1120K) References

Adsorption of ochratoxin A and zearalenone by potential probiotic Saccharomyces cerevisiae strains and its relation with cell wall thickness (pages 256–264) M.R. Armando, R.P. Pizzolitto, C.A. Dogi, A. Cristofolini, C. Merkis, V. Poloni, A.M. Dalcero and L.R. Cavaglieri Abstract Full Article (HTML) PDF(215K) References

Biodefence

Variance in Bacillus anthracis virulence assessed through Bayesian hierarchical dose–response modelling (pages 265–275) J. Mitchell-Blackwood, P.L. Gurian, R. Lee and B. Thran Abstract Full Article (HTML) PDF(668K) References

Effect of animal sera on Bacillus anthracis Sterne spore germination and vegetative cell growth (pages 276–283) M.D. Bensman, R.S. Mackie, Z.A. Minter and B.W. Gutting Abstract Full Article (HTML) PDF(236K) References

Environmental Microbiology

Effect of temperature and antimicrobial resistance on survival of Campylobacter jejuni in well water: application of the Weibull model (pages 284–293) M. González and M.-L. Hänninen Abstract Full Article (HTML) PDF(761K) References

Antimicrobial susceptibilities and resistance genes in Campylobacter strains isolated from poultry and pigs in Australia (pages 294–307) A.S. Obeng, H. Rickard, M. Sexton, Y. Pang, H. Peng and M. Barton Abstract Full Article (HTML) PDF(285K) References

Food/Beverage Microbiology

Isolation and functional characterization of bacterial endophytes from Carica papaya (pages 308–317) P. Krishnan, R. Bhat, A. Kush and P. Ravikumar

Aquaculture Journals Page: 221 of 331

Aquaculture Journals – Table of Contents

Abstract Full Article (HTML) PDF(349K) References

Bacteriocinogenic and virulence potential of Enterococcus isolates obtained from raw milk and cheese (pages 318–328) P.M. Moraes, L.M. Perin, S.D. Todorov, A. Silva Jr, B.D.G.M. Franco and L.A. Nero Abstract Full Article (HTML) PDF(138K) References

Bacterial succession during curing process of a skate (Dipturus batis) and isolation of novel strains (pages 329–338) E. Reynisson, V. Þór Marteinsson, R. Jónsdóttir, S.H. Magnússon and G.O. Hreggvidsson Abstract Full Article (HTML) PDF(301K) References

Methods

Nonrecovery of varying proportions of viable bacteria during spread plating governed by the extent of spreader usage and proposal for an alternate spotting-spreading approach to maximize the CFU (pages 339–350) P. Thomas, A.C. Sekhar and M.M. Mujawar Abstract Full Article (HTML) PDF(298K) References Supporting Information

Automated dead-end ultrafiltration of large volume water samples to enable detection of low-level targets and reduce sample variability (pages 351–360) S.D. Leskinen, E.A. Kearns, W.L. Jones, R.S. Miller, C.R. Bevitas, M.T. Kingsley, R.L. Brigmon and D.V. Lim Abstract Full Article (HTML) PDF(250K) References

Real-time PCR optimization to identify environmental Vibrio spp. strains (pages 361–372) A. Tall, A. Teillon, C. Boisset, R. Delesmont, A. Touron-Bodilis and D. Hervio-Heath Abstract Full Article (HTML) PDF(291K) References Supporting Information

Physiology

The influence of nonconjugative Escherichia coli plasmids on biofilm formation and resistance (pages 373–382) J.S. Teodósio, M. Simões and F.J. Mergulhão Abstract Full Article (HTML) PDF(272K) References

The volatile-producing Flavobacterium johnsoniae strain GSE09 shows biocontrol activity against Phytophthora capsici in pepper (pages 383–398) M.K. Sang and K.D. Kim Abstract Full Article (HTML) PDF(682K) References Supporting Information

Pre- and Probiotics/Intestinal Microbiology

Investigation of the impact of feeding Lactobacillus plantarum CRL 1815 encapsulated in microbially derived polymers on the rat faecal microbiota (pages 399–410) M.L. Jiménez-Pranteda, M. Aguilera, A.L. McCartney, L. Hoyles, M. Jiménez-Valera, M.E. Náder-Macías, A. Ramos-Cormenzana and M. Monteoliva-Sánchez Abstract Full Article (HTML) PDF(446K) References

γ-Aminobutyric acid production by culturable bacteria from the human intestine (pages 411–417)

Aquaculture Journals Page: 222 of 331

Aquaculture Journals – Table of Contents

E. Barrett, R.P. Ross, P.W. O'Toole, G.F. Fitzgerald and C. Stanton Abstract Full Article (HTML) PDF(258K) References

Diversity of faecal oxalate-degrading bacteria in black and white South African study groups: insights into understanding the rarity of urolithiasis in the black group (pages 418–428) C.A. Magwira, B. Kullin, S. Lewandowski, A. Rodgers, S.J. Reid and V.R. Abratt Abstract Full Article (HTML) PDF(356K) References

Public Health Microbiology

Microelectronic-sensing assay to detect presence of Verotoxins in human faecal samples (pages 429–437) J.Z. Xing, L. Zhu, B. Huang, J. Chen and S. Gabos Abstract Full Article (HTML) PDF(803K) References

Cranberry proanthocyanidins act in synergy with licochalcone A to reduce Porphyromonas gingivalis growth and virulence properties, and to suppress cytokine secretion by macrophages (pages 438–447) M. Feldman and D. Grenier Abstract Full Article (HTML) PDF(292K) References

Generation and characterization of an inter-generic bivalent alpha domain fusion protein αCS from Clostridium perfringens and Staphylococcus aureus for concurrent diagnosis and therapeutic applications (pages 448–458) S.R. Uppalapati, J.J. Kingston, H.S. Murali and H.V. Batra Abstract Full Article (HTML) PDF(450K) References

Shewanella putrefaciens, a major microbial species related to tetrodotoxin (TTX)-accumulation of puffer fish Lagocephalus lunaris (pages 459–465) W. Auawithoothij and A. Noomhorm Abstract Full Article (HTML) PDF(206K) References

Antimicrobial activity of wild mushroom extracts against clinical isolates resistant to different antibiotics (pages 466–475) M.J. Alves, I.C.F.R. Ferreira, A. Martins and M. Pintado Abstract Full Article (HTML) PDF(123K) References

Erratum

Article first published online: 17 MAY 2012 | DOI: 10.1111/j.1365-2672.2012.05334.x This article corrects: Decimal reduction times of Pyrodinium bahamense var. compressum and Escherichia coli in chlorine- and ultraviolet-treated seawater Vol. 33, Issue 5, 371–376, Article first published online: 7 JUL 2008 Abstract Full Article (HTML) PDF(51K) References

Previous – Top – Next

VOLUME113, PART 3, SEPTEMBER 2012 Website

Research articles

Reviews

Aquaculture Journals Page: 223 of 331

Aquaculture Journals – Table of Contents

Prevalence and fate of giardia cysts in wastewater treatment plants (pages 477– 484) A.M. Nasser, D. Vaizel-Ohayon, A. Aharoni and M. Revhun 2672.2012.05335.x Abstract Full Article (HTML) PDF(114K) References

Bacterial spore structures and their protective role in biocide resistance (pages 485–498) M.J. Leggett, G. McDonnell, S.P. Denyer, P. Setlow and J.-Y. Maillard 2672.2012.05336.x Abstract Full Article (HTML) PDF(239K) References

Original Articles

Bacteriophage control of vancomycin-resistant enterococci in cattle compost (pages 499–507) K. Otawa, Y. Hirakata, M. Kaku and Y. Nakai Abstract Full Article (HTML) PDF(200K) References

Biodegradation/Bioremediation

Medium-chain-length polyhydroxyalkanoate production by newly isolated Pseudomonas sp. TN301 from a wide range of polyaromatic and monoaromatic hydrocarbons (pages 508–520) T. Narancic, S.T. Kenny, L. Djokic, B. Vasiljevic, K.E. O'Connor and J. Nikodinovic-Runic Abstract Full Article (HTML) PDF(277K) References

Biotechnology

Isolation of bacterial strains able to metabolize lignin from screening of environmental samples (pages 521–530) C.R. Taylor, E.M. Hardiman, M. Ahmad, P.D. Sainsbury, P.R. Norris and T.D.H. Bugg Abstract Full Article (HTML) PDF(327K)References Supporting Information

Biodiesel synthesis by a one-step method in a genetically engineered Escherichia coli using rice straw hydrolysate and restaurant oil wastes as raw materials (pages 531–540) B. Wang, H. Lin, J. Zhan, Y. Yang, Q. Zhou and Y. Zhao Abstract Full Article (HTML) PDF(276K)References Supporting Information

Improvement of the acid stability of Bacillus licheniformis alpha amylase by error- prone PCR (pages 541–549) Y.H. Liu, B. Hu, Y.J. Xu, J.X. Bo, S. Fan, J.L. Wang and F.P. Lu Abstract Full Article (HTML) PDF(502K) References

Analysis and characterization of cultivable extremophilic hydrolytic bacterial community in heavy-metal-contaminated soils from the Atacama Desert and their biotechnological potentials (pages 550–559) M.L. Moreno, F. Piubeli, M.R.L. Bonfá, M.T. García, L.R. Durrant and E. Mellado Abstract Full Article (HTML) PDF(175K) References Supporting Information

Environmental Microbiology

The importance of motility and chemotaxis for extra-animal survival of Salmonella enterica serovar Typhimurium and Dublin (pages 560–568)

Aquaculture Journals Page: 224 of 331

Aquaculture Journals – Table of Contents

J.E. Olsen, K.H. Hoegh-Andersen, J. Casadesús and L.E. Thomsen Abstract Full Article (HTML) PDF(1037K) References

Bacterial populations within copper mine tailings: long-term effects of amendment with Class A biosolids (pages 569–577) I.L. Pepper, H.G. Zerzghi, S.A. Bengson, B.C. Iker, M.J. Banerjee and J.P. Brooks Abstract Full Article (HTML) PDF(408K) References

Food/Beverage Microbiology

Synergism between hydrogen peroxide and seventeen acids against six bacterial strains (pages 578–590) H. Martin and P. Maris Abstract Full Article (HTML) PDF(157K) References

Temperature-dependent effect of sublethal levels of cinnamaldehyde on viability and morphology of Escherichia coli (pages 591–600) J. Visvalingam and R.A. Holley Abstract Full Article (HTML) PDF(560K) References

Methods

Reducing the variability between constant-depth film fermenter experiments when modelling oral biofilm (pages 601–608) C.K. Hope, K. Bakht, G. Burnside, G.C. Martin, G. Burnett, E. de Josselin de Jong and S.M. Higham Abstract Full Article (HTML) PDF(380K) References

Performance of the Sysmex UF1000i system in screening for significant bacteriuria before quantitative culture of aerobic/facultative fast-growth bacteria in a reference hospital (pages 609–614) J. Gutiérrez-Fernández, A. Lara, M.F. Bautista, J. de Dios Luna, P. Polo, C. Miranda and J.M. Navarro Abstract Full Article (HTML) PDF(107K) References

A new real-time PCR method for the identification of Salmonella Dublin (pages 615–621) S. Persson, T. Jacobsen, J.E. Olsen, K.E.P. Olsen and F. Hansen Abstract Full Article (HTML) PDF(155K) References

Mycology

The bacterial signalling molecule indole attenuates the virulence of the fungal pathogen Candida albicans (pages 622–628) S. Oh, G.W. Go, E. Mylonakis and Y. Kim Abstract Full Article (HTML) PDF(286K) References

Physiology

Participation of CWI, HOG and Calcineurin pathways in the tolerance of Saccharomyces cerevisiae to low pH by inorganic acid (pages 629–640) R.M. de Lucena, C. Elsztein, D.A. Simões and M.A. de Morais Jr Abstract Full Article (HTML) PDF(386K) References Supporting Information

Plant Microbiology/Plant Health Microbiology

Aquaculture Journals Page: 225 of 331

Aquaculture Journals – Table of Contents

Biocontrol of verticillium wilt and colonization of cotton plants by an endophytic bacterial isolate (pages 641–651) C.-H. Li, L. Shi, Q. Han, H.-L. Hu, M.-W. Zhao, C.-M. Tang and S.-P. Li Abstract Full Article (HTML) PDF(235K) References

Pre- and Probiotics/Intestinal Microbiology

Intracellular lipid accumulation inhibitory effect of Weissella koreensis OK1-6 isolated from Kimchi on differentiating adipocyte (pages 652–658) Y.J. Moon, J.R. Soh, J.J. Yu, H.S. Sohn, Y.S. Cha and S.H. Oh Abstract Full Article (HTML) PDF(279K) References

Competitive effect of commensal faecal bacteria from growing swine fed chlortetracycline-supplemented feed on β-haemolytic Escherichia coli strains with multiple antimicrobial resistance plasmids (pages 659–668) T.L. Poole, T.R. Callaway, K.M. Bischoff, G.H. Loneragan, R.C. Anderson and D.J. Nisbet Abstract Full Article (HTML) PDF(186K) References

Public Health Microbiology

Helicobacter pylori biofilm: a protective environment for bacterial recombination (pages 669–676) R. Grande, E. Di Campli, S. Di Bartolomeo, F. Verginelli, M. Di Giulio, M. Baffoni, L.J. Bessa and L. Cellini Abstract Full Article (HTML) PDF(332K) References

Rational design of anti-microbial peptides with enhanced activity and low cytotoxicity based on the structure of the arginine/histidine-rich peptide, chensinin-1 (pages 677–685) D. Shang, Y. Sun, C. Wang, L. Ma, J. Li and X. Wang Abstract Full Article (HTML) PDF(465K) References

Norovirus contamination in different shellfish species harvested in the same production areas (pages 686–692) E. Suffredini, C. Magnabosco, M. Civettini, E. Rossetti, G. Arcangeli and L. Croci Abstract Full Article (HTML) PDF(143K) References

Assessment of pathogen survival potential during managed aquifer recharge with diffusion chambers (pages 693–700) J.P.S. Sidhu and S. Toze Abstract Full Article (HTML) PDF(372K) References

Variability in the concentrations of volatile metabolites emitted by genotypically different strains of Pseudomonas aeruginosa (pages 701–713) V. Shestivska, P. Španěl, K. Dryahina, K. Sovová, D. Smith, M. Musílek and A. Nemec Abstract Full Article (HTML) PDF(399K) References Supporting Information

Mode of action and safety of lactosporin, a novel antimicrobial protein produced by Bacillus coagulans ATCC 7050 (pages 714–722) S. Riazi, S.E. Dover and M.L. Chikindas Abstract Full Article (HTML) PDF(270K) References

Previous – Top – Next

Aquaculture Journals Page: 226 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff AAAppppppllliiieeeddd PPPhhhyyycccooolllooogggyyy

VOLUME 24, PART 4, AUGUST 2012 Website

Research articles

Phylogenetic position of Dunaliella acidophila (Chlorophyceae) based on ITS and rbcL sequences Patrícia Assunção, Ruth Jaén-Molina, Juli Caujapé-Castells, Adelina de la Jara and Laura Carmona, et al. Download PDF (213.1 KB) View HTML Supplemental

Analysis of expressed sequence tags from the agarophyte Gracilaria tenuistipitata (Rhodophyta) Pi Nyvall Collén, Jonas Collén, Marcelo da Silva Reis, Marianne Pedersén and João C. Setubal, et al. Download PDF (191.0 KB) View HTML

Effect of alginate structure and microalgae immobilization method on orthophosphate removal from wastewater Narges Zamani, Masoud Noshadi, Seifollah Amin, Ali Niazi and Younes Ghasemi Download PDF (220.3 KB) View HTML

Carbon metabolism and energy conversion of Synechococcus sp. PCC 7942 under mixotrophic conditions: comparison with photoautotrophic condition Riming Yan, Du Zhu, Zhibin Zhang, Qingui Zeng and Ju Chu Download PDF (369.4 KB) View HTML

Effect of mixed carbon substrate on exopolysaccharide production of cyanobacterium Nostoc flagelliforme in mixotrophic cultures Haifeng Yu Download PDF (173.7 KB) View HTML

Effect of enzyme-assisted extract of Sargassum coreanum on induction of apoptosis in HL-60 tumor cells Seok-Chun Ko, Seung-Hong Lee, Ginnae Ahn, Kil-Nam Kim and Seon-Heui Cha, et al. Download PDF (505.8 KB) View HTML

Cloning and characterization of the HLIP gene encoding high light-inducible protein from Porphyra yezoensis Fanna Kong, Yunxiang Mao, Hui Yang, Li Wang and Limin Liu Download PDF (761.7 KB) View HTML

Open Access Performance of Chlorella sorokiniana under simulated extreme winter conditions María Cuaresma Franco, Marieke F. Buffing, Marcel Janssen, Carlos Vílchez Lobato and René H. Wijffels Download PDF (177.0 KB) View HTML

Effects of ambient calcium concentration on morphological form of callus-like cells in Saccharina japonica (Phaeophyceae) sporophyte Miwa Kanamori, Hiroyuki Mizuta and Hajime Yasui Download PDF (379.4 KB) View HTML

Aquaculture Journals Page: 227 of 331

Aquaculture Journals – Table of Contents

Zygote-derived seedling production of Sargassum thunbergii: focus on two frequently experienced constraints in tank culture of seaweed Quan Sheng Zhang, Yong Zheng Tang, Shi Kai Liu, Shu Bao Zhang and Zhi Cheng Lu, et al. Download PDF (347.5 KB) View HTML

Designed optimization of a single-step extraction of fucose-containing sulfated polysaccharides from Sargassum sp. Marcel Tutor Ale, Jørn Dalgaard Mikkelsen and Anne S. Meyer Download PDF (442.7 KB) View HTML

Optimization of pressurized liquid extraction of zeaxanthin from Chlorella ellipsoidea Song Yi Koo, Kwang Hyun Cha, Dae-Geun Song, Donghwa Chung and Cheol-Ho Pan Download PDF (251.7 KB) View HTML

Antiviral compounds obtained from microalgae commonly used as carotenoid sources Susana Santoyo, Laura Jaime, Merichel Plaza, Miguel Herrero and Irene Rodriguez-Meizoso, et al. Download PDF (269.8 KB) View HTML

Increasing γ-linolenic acid content in Spirulina platensis using fatty acid supplement and light–dark illumination Eun-Kyung Kim, Gang-Guk Choi, Hee-Sik Kim, Chi-Yong Ahn and Hee-Mock Oh Download PDF (316.4 KB) View HTML

Comparison of techniques used to count single-celled viable phytoplankton Mia K. Steinberg, Matthew R. First, Edward J. Lemieux, Lisa A. Drake and Bruce N. Nelson, et al. Download PDF (366.2 KB) View HTML

Modelling seasonal growth and composition of the kelp Saccharina latissima Ole Jacob Broch and Dag Slagstad Download PDF (571.1 KB) View HTML

Microalgal transformation of progesterone by the terrestrial-isolated cyanobacterium Microchaete tenera Mohammad Sadegh Safiarian, Mohammad Ali Faramarzi, Mohsen Amini, Neda Soltani and Minoosadat Tabatabaei-Sameni, et al. Download PDF (195.1 KB) View HTML

Cyclic tetrapyrrolic photosensitizers from Cladophora patentiramea (Cladophoraceae, Chlorophyta) and Turbinaria conoides (Sargassaceae, Phaeophyta) for photodynamic therapy Yee Voon Tang, Siew Moi Phang, Wan Loy Chu, Anthony Ho and Soo Hwang Teo, et al. Download PDF (273.1 KB) View HTML Supplemental

Microalgal fatty acid composition: implications for biodiesel quality Graham Robert Stansell, Vincent Myles Gray and Stuart David Sym Download PDF (207.9 KB) View HTML

Production and characterization of poly-β-hydroxybutyrate (PHB) polymer from Aulosira fertilissima Shilalipi Samantaray and Nirupama Mallick Download PDF (421.9 KB) View HTML

Aquaculture Journals Page: 228 of 331

Aquaculture Journals – Table of Contents

Effects of increased CO2 levels on growth, photosynthesis, ammonium uptake and cell composition in the macroalga Hypnea spinella (Gigartinales, Rhodophyta) Sonia Suárez-Álvarez, Juan Luis Gómez-Pinchetti and Guillermo García-Reina Download PDF (348.0 KB) View HTML

Responses of Pyrodinium bahamense var. compressum and associated cultivable bacteria to antibiotic treatment Mary Ann G. Santos and Rhodora V. Azanza Download PDF (502.0 KB) View HTML

Will a DNA barcoding approach be useful to identify Porphyra species (Bangiales, Rhodophyta)? A case study with Brazilian taxa Daniela Milstein, Amanda S. Medeiros, Eurico C. Oliveira and Mariana C. Oliveira Download PDF (420.9 KB) View HTML

The antialgal activity of 40 medicinal plants against Microcystis aeruginosa Yang-Lei Yi, Yi Lei, Yue-Bang Yin, Hong-Yu Zhang and Gao-Xue Wang Download PDF (522.4 KB) View HTML

Bioethanol production from the acid hydrolysate of the carrageenophyte Kappaphycus alvarezii (cottonii) Maria Dyah Nur Meinita, Ji-Young Kang, Gwi-Taek Jeong, Hyun Min Koo and Sung Min Park, et al. Download PDF (208.6 KB) View HTML

Effect of oxygen concentration on the growth of Nannochloropsis sp. at low light intensity Sayam Raso, Bernard van Genugten, Marian Vermuë and René H. Wijffels Download PDF (381.8 KB) View HTML Open Access

Isolation and characterization of a long-chain acyl-coenzyme A synthetase encoding gene from the marine microalga Nannochloropsis oculata Lin Zhang, Xiaolei Ma, Guanpin Yang, Baohua Zhu and Jichang Han, et al. Download PDF (508.8 KB) View HTML

Analysis of photosynthetic pigments and chlorophyll fluorescence characteristics of different strains of Porphyra yezoensis Tao Zhang, Zonggen Shen, Pu Xu, Jianyi Zhu and Qinqin Lu, et al. Download PDF (545.0 KB) View HTML

Media optimization of Parietochloris incisa for arachidonic acid accumulation in an outdoor vertical tubular photobioreactor Hazel Guevarra Tababa, Seishiro Hirabayashi and Kazuyuki Inubushi Download PDF (821.0 KB) View HTML Open Access

Enhancement of phenolic compound production in Spirulina platensis by two- step batch mode cultivation Remziye Aysun Kepekçi and Saadet Demirörs Saygideger Download PDF (225.8 KB) View HTML

Changes in lipid, protein and pigment concentrations in nitrogen-stressed Chlorella minutissima cultures Vince Ördög, Wendy A. Stirk, Péter Bálint, Johannes van Staden and Csaba Lovász

Aquaculture Journals Page: 229 of 331

Aquaculture Journals – Table of Contents

Download PDF (254.2 KB) View HTML

A statistical approach for optimization of R-phycoerythrin extraction from the red algae Gracilaria verrucosa by enzymatic hydrolysis using central composite design and desirability function Fethi Mensi, Jamel Ksouri, Emma Seale, Mohamed Salah Romdhane and Joêl Fleurence Download PDF (824.1 KB) View HTML

Effect of temperature and irradiance on the growth and reproduction of the green macroalga, Chaetomorpha valida (Cladophoraceae, Chlorophyta) Yunyan Deng, Xiaorong Tang, Bingxin Huang and Lanping Ding Download PDF (273.9 KB) View HTML

Lactic acid production from seaweed hydrolysate of Enteromorpha prolifera (Chlorophyta) Hyeong Jin Hwang, Suk Min Kim, Jin Hwa Chang and Sun Bok Lee Download PDF (141.9 KB) View HTML

Spatial and temporal variations of Chondrus crispus (Gigartinaceae, Rhodophyta) carrageenan content in natural populations from Galicia (NW Spain) Manuel García Tasende, Miguel Cid and M. Isabel Fraga Download PDF (1.4 MB) View HTML

Use of an algal consortium of five algae in the treatment of landfill leachate using the high-rate algal pond system Emienour-Muzalina Mustafa, Siew-Moi Phang and Wan-Loy Chu Download PDF (371.3 KB) View HTML

Competition between the cyanobacterium Microcystis aeruginosa and the diatom Cyclotella sp. under nitrogen-limited condition caused by dilution in eutrophic lake Yoshimasa Amano, Kosei Takahashi and Motoi Machida Download PDF (282.2 KB) View HTML

Echinenone production of a dark red-coloured strain of Botryococcus braunii Hiroshi Matsuura, Makoto M. Watanabe and Kunimitsu Kaya Download PDF (206.3 KB) View HTML

Heavy metal uptake capacities by the common freshwater green alga Cladophora fracta Li Ji, Shulian Xie, Jia Feng, Yanhui Li and Le Chen Download PDF (208.6 KB) View HTML

Erratum

Erratum to: Microalgal fatty acid composition: implications for biodiesel quality Graham Robert Stansell, Vincent Myles Gray and Stuart David Sym Download PDF (61.0 KB) View HTML

Erratum to: Media optimization of Parietochloris incisa for arachidonic acid accumulation in an outdoor vertical tubular photobioreactor Hazel Tababa Guevarra, Seishiro Hirabayashi and Kazuyuki Inubushi Download PDF (55.7 KB) View HTML

Previous – Top – Next

Aquaculture Journals Page: 230 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff aaaqqquuuaaacccuuullltttuuurrreee RRReeessseeeaaarrrccchhh &&& DDDeeevvveeelllooopppmmmeeennnttt

VOLUME 3, PART 3, MAY 2012 Website

Research articles

Development of Labrus Bergylta (Ascanius 1767) Larvae from Hatching to Metamorphosis OH Ottesen, E Dunaevskaya and JD’Arcy

Energy Partitioning by Litopenaeus Vannamei (Boone, 1931) given Plant Protein Diets Suárez JA, Gaxiola G, Posso R, Garcia G, Alanis G, Suárez A, Faillace J and Cuzon G

Evaluation of Partial Replacement of Dietary Animal Protein from Plant Protein Blended with Glucosamine on Growth and Body Indices of Asian Catfish (Clarias Batrachus) Fingerlings Shipra Chowdhary, Srivastava PP, Suman Mishra, Dayal R, Yadav AK and Jena JK

Protective Efficacy of Aqueous Extract of Naringi Crenulata Leaves against Shampoo (Endocrine Disruptor) Induced Toxicity in Labeo Rohita Sartaj Ahmad Allayie, Hemalatha S, Elanchezhiyan C, Manoharan V, Silambarasan N, Balasubramanian K, Raaman N and Siveraj C

Antimicrobial Resistance Patterns of Aeromonas spp. Isolated from Ornamental Fish Carla Dias, Vânia Mota, António Martinez-Murcia and Maria José Saavedra

Aspects of a Monosex Population of Oreochromis Niloticus Fingerlings Produced Using 17-α Methyl Testosterone Hormone Utete Beaven and Victor Muposhi

Previous – Top

VOLUME 3, PART 3, JULY 2012 Website

Research articles

Induced Breeding of African Mud Catfish, Clarias gariepinus (Burchell 1822), using Different Doses of Normal Saline Diluted Ovaprim Olumuji OK and Mustapha MK

Breeding and Larval Rearing of Asian Catfish, Clarias batrachus (Linnaeus, 1758) on Live and Artificial Feed Aquaculture Journals Page: 231 of 331

Aquaculture Journals – Table of Contents

Prem Prakash Srivastava, Sudhir Raizada, Rajesh Daya, Shipra Chowdhary, Wazir Singh Lakra, Akhilesh Kumar Yadav, Priya Sharma and Jyoti Gupta

Long-Term Effects and Interactions of Different Levels of Dietary Vitamin C and E and Highly Unsaturated Fatty Acid on Sperm Parameters in Goldfish (Carassius auratus gibelio) Hanaee Kashani Z, Mohammad Reza Imanpoor, Ali shabani and Saeed Gorgin

Previous – Top

Aquaculture Journals Page: 232 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff EEExxxpppeeerrriiimmmeeennntttaaalll MMMaaarrriiinnneee BBBiiiooolllooogggyyy aaannnddd EEEcccooolllooogggyyy

VOLUME 422-423, JULY 2012 Website

Research articles

The role of disturbance in differential regulation of co-occurring brown algae species: Interactive effects of sediment deposition, abrasion and grazing on algae recruits Rita Araujo, Francisco Arenas, Per Åberg, Isabel Sousa-Pinto, Ester A. Serrão Show preview | PDF (550 K) | Related articles | Related reference work articles Highlights ► We studied the effects of disturbance in marginal populations of fucoids. ► Sources of disturbance used were sedimentation, abrasion and herbivory. ► Response variables were survival and growth of F. serratus and F. vesiculosus embryos. ► F. serratus growth was enhanced by abrasion and herbivory that also affected survival. ► F. vesiculosus survival suffered the interactive effects of all the disturbances.

Grazing and nutrient effects on a high rocky intertidal of the Peruvian central coast F.N. Firstater, F.J. Hidalgo, B.J. Lomovasky, O.O. Iribarne Show preview | PDF (412 K) | Related articles | Related reference work articles Highlights ► Over the short-term, grazing has greater effect on biofilm than nutrient addition. ► Over the longer-term, both nutrients and grazers affect biofilm cover. ► The effects of grazers and nutrients on biofilm are not reflected in macroalgae. ► Biofilm would be nutrient-limited in high intertidal of this nutrient-replete system.

Assessing the effect of food and light on Calanus sinicus swimming behavior through video-recording experiments Ming-Ren Chen, Maud Moison, Juan Carlos Molinero, Jiang-Shiou Hwang Show preview | PDF (540 K) | Related articles | Related reference work articles Highlights ► We used robust numerical techniques to identify behavioral patterns of C. sinicus. ► The light and food availability plays key role in C. sinicus. ► C. Sinicus exhibits an adaptive strategy for feeding success and minimize risk. ► Mechanistic understanding of Calanus sinicus feeding ecology.

The influence of intertidal location and temperature on the metabolic cost of emersion in Pisaster ochraceus Elizabeth K. Fly, Cristián J. Monaco, Sylvain Pincebourde, Alexa Tullis Show preview | PDF (571 K) | Supplementary content | Related articles | Related reference work articles Highlights ►Sea stars remained mainly in the low intertidal or heat-protected areas at low tide. ►Body temperature of sea stars increased along the vertical intertidal gradient. ►Oxygen consumption increased with temperature in both air and water. ►Aquatic oxygen consumption was about 2 × higher than aerial oxygen consumption. ►Water temperature affected bioenergetics more than microhabitat choice.

Aquaculture Journals Page: 233 of 331

Aquaculture Journals – Table of Contents

Foraging ecology and ecophysiology of Cape gannets from colonies in contrasting feeding environments Christina Moseley, David Grémillet, Maëlle Connan, Peter G. Ryan, Ralf H.E. Mullers, Carl D. van der Lingen, Todd W. Miller, Janet C. Coetzee, Robert J.M. Crawford, Philippe Sabarros, Christopher D. McQuaid, Lorien Pichegru Show preview | PDF (857 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Gannets from a larger colony worked harder to feed their chicks. ► Long-term dependence on low quality diet did not affect breeding gannet body condition. ► Behavioural plasticity apparently offsets local prey shortages. ► Highlights importance of monitoring of population health indices and behaviour.

Cypris settlement and dwarf male formation in the barnacle Scalpellum scalpellum: A model for an androdioecious reproductive system U. Spremberg, J.T. Høeg, L. Buhl-Mortensen, Y. Yusa Show preview | PDF (1790 K) | Supplementary content | Related articles | Related reference work articles Highlights ► of S. scalpellum can carry 0–13 dwarf males. ► In field populations males are invariably located in two confined receptacle areas. ► Experiments show that cyprids developing into males settle in these areas. ► Settled cyprids penetrate into the tissue within 12 h after settlement. ► These events are documented by video observations.

Decoupling of recruitment from adult clam assemblages along an estuarine shoreline Megan N. Dethier, Jennifer Ruesink, Helen Berry, Amy G. Sprenger Show preview | PDF (701 K) | Related articles | Related reference work articles Highlights ► Clam abundances are low in inner Puget Sound despite abundant recruitment. ► Survival of recruits into tubes with predator protection was only slightly increased. ► Few juvenile clams were present in inner-estuarine tubes after a summer season. ► Higher summer sediment temperatures in the inner estuary may kill juvenile clams.

Changes in sedimentation, sediment characteristics, and benthic macrofaunal assemblages around marine cage culture under seasonal monsoon scales in a shallow-water bay in Taiwan Yuan-Chao Angelo Huang, Shou-Chung Huang, Hernyi Justin Hsieh, Pei-Jie Meng, Chaolun Allen Chen Show preview | PDF (646 K) | Related articles | Related reference work articles Highlights ► Marine cage culture caused higher levels of sedimentation and organic loading. ► Stress- tolerant polychaetes thrived in the cage sites with organic enrichment. ► Hydrographic regimes affected by seasonal monsoon may influence the bottom environment. ► Strong monsoon determined the extent of benthic environmental deterioration.

Determining the native region of the putatively invasive ascidian Didemnum vexillum Kott, 2002 Lauren Stefaniak, Huan Zhang, Adriaan Gittenberger, Kirsty Smith, Kent Holsinger, Senjie Lin, Robert B. Whitlatch

Aquaculture Journals Page: 234 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (744 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Genetic diversity of Didemnum vexillum in Japan was greater than in any other region. ► European, W. North American, & New Zealand populations underwent genetic bottlenecks. ► Didemnum vexillum is native to the temperate Northwest Pacific Ocean.

Effects of egg size reductions on development time and juvenile size in three species of echinoid : Implications for life history theory Jonathan D. Allen Show preview | PDF (784 K) | Related articles | Related reference work articles Highlights ► Egg size is a fundamental life history trait. ► Egg size manipulations were conducted in three species of echinoids ► Smaller eggs resulted in longer development time in all species ► Smaller eggs resulted in reductions in juvenile size in one species. ► Small egged and large egged species differ fundamentally in egg energy use

Predators and distance between habitat patches modify gap crossing behaviour of juvenile Atlantic cod (Gadus morhua, L. 1758) Mary R. Ryan, Shaun S. Killen, Robert S. Gregory, Paul V.R. Snelgrove Show preview | PDF (510 K) | Related articles | Related reference work articles Highlights ► We studied the movement of juvenile Atlantic cod between two habitat patches. ► We explore the potential effects of inter-patch distance and predator presence. ► Increased inter-patch distance reduces movement frequency as does predator presence. ► Interactive effects influence fish movement between patches.

The effect of geographic origin on interactions between adult invasive green crabs carcinus maenas and juvenile American lobsters Homarus americanus in Atlantic Canada Marthe Larsen Haarr, Rémy Rochette Show preview | PDF (894 K) | Related articles | Related reference work articles Highlights ► Survival of juvenile lobsters in the presence of green crabs varies with crab origin. ► Differential predation by green crabs appears linked to crab invasive history. ► Green crabs also prey differentially on lobsters from different geographic origins. ► Neither crab behaviour nor morphology correlated with predation patterns.

Cannibalism in red king crab, Paralithodes camtschaticus (Tilesius, 1815): Effects of habitat type and predator density on predator functional response W. Christopher Long, Jessica Popp, Katherine M. Swiney, Scott B. Van Sant Show preview | PDF (565 K) | Related articles | Related reference work articles Highlights ► Red king crab exhibit cannibalism between and among age classes. ► We determined the cannibalistic functional response of year-1 crab on year-0 crab. ► We examined the effects of habitat and predator density on the functional response. ► The function response was type II in all habitats and at all predator densities. ► Predation was lower in complex habitats and predators exhibited minor interference.

Aquaculture Journals Page: 235 of 331

Aquaculture Journals – Table of Contents

Effect of pulsed gastric lavage on apparent survival of a juvenile fish in a natural system Andrew B. Barbour, Ross E. Boucek, Aaron J. Adams Show preview | PDF (575 K) | Related articles | Related reference work articles Highlights ► We model apparent survival of lavaged versus not lavaged juvenile common snook. ► The first examination of pulsed gastric lavage (PGL) effects in a natural system ► We found a significant effect of PGL on apparent survival, a 12.0–17.4% reduction. ► Evidence is indicative of lethal as opposed to sublethal (emigration) PGL effect. ► Future studies using PGL must consider influence of PGL effects in natural settings.

Friend or foe: Conflicting demands and conditional risk taking by opportunistic scavengers F. Joel Fodrie, Michelle C. Brodeur, Benjamin J. Toscano, Sean P. Powers Show preview | PDF (721 K) | Related articles | Related reference work articles Highlights ► Some prey have additional positive interactions with their predators. ► Little is known about how this affects risk management behaviors. ► Our study focused on oyster drills and one of their major predators, stone crabs. ► Crabs also serve as an ally for scavenging drills by breeching oysters shells. ► In certain scenarios, drills accept greater risk due to this facilitation.

Division of labor in rhizomatous species: Comparative performance of native and invasive species in the tidal marshes of the Yangtze River estuary, China Yanlong He, Xiuzhen Li, Wenyong Guo, Zhigang Ma Show preview | PDF (1040 K) | Related articles | Related reference work articles Highlights ► The native and exotic species exhibited different responses to different habitat. ► The sexual and asexual reproduction transit between different zones for Scirpus. ► The asexual reproduction and competitive capacity are stronger for Spartina.

Reproductive cycle and sex hormones in the feather star Antedon mediterranea Alice Barbaglio, Michela Sugni, Denise Fernandes, Cinta Porte, M. Daniela Candia Carnevali Show preview | PDF (1319 K) | Related articles | Related reference work articles Highlights ►Available information on crinoid reproductive physiology is scarce. ►Spawning throughout the year was observed in Antedon mediterranea. ►The sex ratio resulted shifted in favor of females in Antedon mediterranea. ►T & E2 levels were higher at the beginning of gametogenesis and during vitellogenesis.

Previous – Top – Next

VOLUME 424-425, AUGUST 2012 Website

Research articles

Protein expression of hypoxia-inducible factor 1-alpha (HIF-1α) in spot (Leiostomus xanthurus) exposed to constant and diel-cycling hypoxia

Aquaculture Journals Page: 236 of 331

Aquaculture Journals – Table of Contents

Mason J. Smith, James Gelsleichter, Kelly J. Smith Show preview | PDF (299 K) | Related articles | Related reference work articles Highlights ► This is the first study examining HIF-1α protein expression in fish exposed to constant versus cyclic hypoxia. ► Diel-cycling hypoxia produced more expression of HIF-1α to constant hypoxia over three days during all trials. ► We conclude that overnight hypoxia from diel-cycling systems is detectable using HIF-1α protein.

Acute toxicity and sub-lethal effects of common pesticides in post-larval and juvenile blue crabs, Callinectes sapidus Joshua S. Osterberg, Kelly M. Darnell, T. Michelle Blickley, Jocelyn A. Romano, Dan Rittschof Show preview | PDF (718 K) | Related articles | Related reference work articles Highlights ► Juvenile blue crabs can inhabit shallow tidal creeks that drain agricultural fields. ► We tested 24 h acute toxicity of pesticides to blue crab megalopae and juveniles. ► Active ingredient toxicity: λ-cyhalothrin > imidacloprid ≈ aldicarb > acephate. ► Sensitivity: megalopae > juveniles; toxicity: commercial ≈ active ingredient. ► Significant metamorphosis-related mortality was found with most of the tested pesticides.

Calcification and photobiology in symbiont-bearing benthic foraminifera and responses to a high CO2 environment Nikolas Vogel, Sven Uthicke Show preview | PDF (377 K) | Related articles | Related reference work articles Highlights ► The response to pCO2 increase was investigated on three benthic foraminifera. ► M. vertebralis shows increased calcification after 41 days in elevated CO2 dosing. ► Increased pCO2 showed no effect on photobiology of the foraminifera investigated. ► Previous field studies indicate long-term impacts of high CO2 conditions. ► The study highlights that laboratory experiments can differ from field observation.

Life history and morphological shifts in an intertidal seagrass following multiple disturbances Jennifer L. Ruesink, John P. Fitzpatrick, Brett R. Dumbauld, Sally D. Hacker, Alan C. Trimble, Eric L. Wagner, Lorena M. Wisehart Show preview | PDF (501 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Eelgrass (Zostera marina) responded to shoot damage by remodeling morphology. ► Eelgrass responded to shoot loss by increased clonal branching of remaining shoots. ► At upper vs. lower elevations, shoots were smaller, grew slower, and flowered more. ► Responses to multiple disturbances were generally additive.

Relationship between CO2-driven changes in extracellular acid–base balance and cellular immune response in two polar echinoderm species S. Dupont, M. Thorndyke Show preview | PDF (358 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 237 of 331

Aquaculture Journals – Table of Contents

► Sea urchins are able to fully compensate pHe for elevated pCO2 within 5 days. ► Sea stars are not. ► There is a link between pHe and cellular immune response. ► There is no evidence for increased sensitivity to elevated pCO2 in Polar species. ► To elevated pCO2 in Polar species compared to Temperate/Tropical ones.

Thermal acclimation capacity for four Arctic marine benthic species Joëlle Richard, Simon Anthony Morley, Julien Deloffre, Lloyd Samuel Peck Show preview | PDF (343 K) | Related articles | Related reference work articles Highlights ► Responses of 4 Arctic marine benthic species to elevated temperature are tested. ► Both a sea urchin and gastropod species can acclimate to 10.3 °C. ► Some individuals of the bivalve and amphipod species can also acclimate to 10.3 °C. ► This is more than 3 °C higher than experienced maximum summer temperatures. ► This is similar to the acclimation capacities of cool temperate species.

Stable isotopes indicate differing foraging strategies in two sympatric otariids of the Galapagos Islands Diego Páez-Rosas, David Aurioles-Gamboa, Juan José Alava, Daniel M. Palacios Show preview | PDF (660 K) | Related articles | Related reference work articles Highlights ► The study focus on the trophic ecology of sympatric species, using stable isotopes. ► The study evaluates differences in feeding areas between the otariids of Galapagos. ► It's the first study to compare the isotopic values of these otariids and their prey.

Calcification acidifies the microenvironment of a benthic foraminifer (Ammonia sp.) Martin S. Glas, Gerald Langer, Nina Keul Show preview | PDF (939 K) | Related articles | Related reference work articles Highlights ► Microsensor measurements around a benthic foraminifer (Ammonia sp.). ► pH and Ca2+ microenvironmental dynamics at different life stages. ► pH decreases on the test surface while precipitating calcite. ► H+ expulsion during calcification as a mean to maintain pH homeostasis.

Trophic relationships and UV-absorbing compounds in a Mediterranean medio- littoral rocky shore community Sarah Nahon, Christian Nozais, Jérôme Delamare-Deboutteville, Karine Escoubeyrou, Martin Desmalades, Audrey M. Pruski, Ulf Karsten, François Charles Show preview | PDF (259 K) | Related articles | Related reference work articles Highlights ► Mycosporine like amino-acids (MAAs) are a widespread strategy to counteract UV stress. ► This study was designed to search for MAAs in benthic invertebrates. ► Trophic relationship was investigated to elucidate the pathways of MAA transfer. ► We observed a higher MAA diversity in animals than in food sources. ► This is explained by their incorporation from trophic resources or by their conversion.

Effects of light availability on mixotrophy and microzooplankton grazing in an oligotrophic plankton food web: Evidences from a mesocosm study in Eastern Mediterranean waters

Aquaculture Journals Page: 238 of 331

Aquaculture Journals – Table of Contents

Albert Calbet, Rodrigo A. Martínez, Stamatina Isari, Soultana Zervoudaki, Jens C. Nejstgaard, Paraskevi Pitta, Andrey F. Sazhin, Despoina Sousoni, Ana Gomes, Stella A. Berger, Tatiana M. Tsagaraki, Robert Ptacnik Show preview | PDF (1249 K) | Related articles | Related reference work articles Highlights ► We examined the effects of light limitation on E. Mediterranean plankton using mesocosms. ► Grazers final biomass was ca. 2x higher in the high light than in the dark treatments. ► Mixotrophic ciliates decreased under light limitation. ► Flagellated mixotrophs enhanced grazing response only in dark treatment, on last day. ► The carbon flux through microzooplankton in high light treatment was ca. 50% higher.

Synthesis towards a global-bathymetric model of metabolism and chemical composition of marine pelagic chaetognaths Tsutomu Ikeda, Tomokazu Takahashi Show preview | PDF (562 K) | Related articles | Related reference work articles Highlights ► The new and literature data of chaetognaths from diverse habitats were compiled. ► Respiration was found to be a function of body mass, temperature and depth collected. ► Body CN compositions were little affected by temperature and depth. ► The results are consistent with those of pelagic copepods for respiration. ► The results contrast with those of pelagic copepods for CN compositions.

Seawater acidification by CO2 in a coastal lagoon environment: Effects on life history traits of juvenile mussels Mytilus galloprovincialis P. Range, D. Piló, R. Ben-Hamadou, M.A. Chícharo, D. Matias, S. Joaquim, A.P. Oliveira, L. Chícharo Show preview | PDF (461 K) | Related articles | Related reference work articles Highlights ► Pure CO2 was used to reduce pH by 0.3 and 0.6 units, relative to natural seawater. ► Growth and survival of juvenile mussels were unaffected by 84 days of exposure. ► Inorganic shell weight decreased with pH, indicating reduced net-calcification. ► Elevated seawater alkalinity attenuated detrimental effects on carbonate supply. photoQuad: A dedicated seabed image processing software, and a comparative error analysis of four photoquadrat methods V. Trygonis, M. Sini Show preview | PDF (1466 K) | Related articles | Related reference work articles Graphical abstract

Aquaculture Journals Page: 239 of 331

Aquaculture Journals – Table of Contents

Highlights ► photoQuad is a dedicated software for the study of sessile benthic communities. ► photoQuad offers multiple quadrat analysis options in a layer-based environment. ► An error analysis of four quadrat processing methods is performed on simulated data. ► Region and segment-based methods show lower errors and sensitivity to patch size.

Previous – Top – Next

VOLUME 426-427, SEPTEMBER 2012 Website

Research articles

Personality and habitat segregation in giant sea anemones (Condylactis gigantea) Nicholai M. Hensley, Taylor C. Cook, Mason Lang, Matthew B. Petelle, Daniel T. Blumstein Show preview | PDF (246 K) | Related articles | Related reference work articles Highlights ► We tested for in situ intra-individual behavioral differences in giant sea anemones. ► We recorded a variety of microhabitat variables within 1 m of anemones. ► Anemones had consistently different withdrawal responses (i.e. they have personality). ► Personality differences were explained by anemone color and environmental factors. ► Differences may result from habitat variation or selective segregation.

The slowest fish: Swim speed and tail-beat frequency of Greenland sharks Yuuki Y. Watanabe, Christian Lydersen, Aaron T. Fisk, Kit M. Kovacs Show preview | PDF (501 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Swim speed and tail-beat frequency of Greenland sharks were measured. ► These were the lowest among fishes when body size was accounted for. ► Arctic seals, prey of the sharks, swim much faster. ► Depressing effect of cold waters on muscle functions might explain our results. ► Sharks may prey on seals sleeping in water.

Juvenile growth of the tropical sea urchin Lytechinus variegatus exposed to near-future scenarios Rebecca Albright, Charnelle Bland, Phillip Gillette, Joseph E. Serafy, Chris Langdon, Thomas R. Capo Show preview | PDF (625 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We evaluate the effect of ocean acidification on juvenile urchin growth. ► We show that elevated pCO2 depresses juvenile urchin growth. ► Scanning electron microscopy indicates that elevated pCO2 alters skeletal integrity.

Allometric relationships in feeding and digestion in the Chilean mytilids Mytilus chilensis (Hupé), Choromytilus chorus (Molina) and Aulacomya ater (Molina): A comparative study Irrintzi Ibarrola, Udane Arambalza, Jorge M. Navarro, Miren Bego Urrutia, Enrique Navarro Show preview | PDF (581 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 240 of 331

Aquaculture Journals – Table of Contents

Highlights ► Mytilus chilensis, Choromytilus chorus and Aulacomya ater co-occur sympatrically. ► M. chilensis have the highest and A. ater the lowest filtration rates and gill areas. ► M.chilensis attains the highest and A. ater the lowest size-specific gut contents. ► Interspecific differences in gut contents correlates with digestive enzyme activity. ► Morpho-functional traits allow M. chilensis to be faster feeder.

Decomposing mangrove litter supports a microbial biofilm with potential nutritive value to penaeid shrimp post larvae Charles Gatune, Ann Vanreusel, Clio Cnudde, Renison Ruwa, Peter Bossier, Marleen De Troch Show preview | PDF (647 K) | Related articles | Related reference work articles Highlights ► 4 weeks decomposed mangrove litter supports high micro-algae and bacteria. ► 4 weeks mangrove litter biofilm provides most essential fatty acids to shrimp. ► Mangrove biofilm provides less fatty acids to shrimp than open creek controls. ► Stable isotope signatures show that shrimp use seagrass material.

Ecological physiology of the circadian pigmentation rhythm in the fiddler crab Uca panacea M. Zachary Darnell Show preview | PDF (672 K) | Related articles | Related reference work articles Highlights ► I examined circadian pigmentation rhythms in the fiddler crab Uca panacea. ► Both cellular (melanophore) and organismal rhythms were examined. ► Pigment dispersion was maximal (and carapace reflectance minimal) during the day. ► The rhythm was entrained by LD cycles and, to a lesser extent, temperature cycles. ► The functional significance of the rhythm may be for UV‐protection.

Risk assessment via predator diet cues in a coral reef goby R.P. Manassa, M.I. McCormick Show preview | PDF (225 K) | Related articles | Related reference work articles Highlights ► First study on predator diet cues in a coral reef fish. ► A component of the prey chemical cue may not completely degrade during digestion. ► Magnitude of response to faecal cues not different to pure chemical cue. ► Predator diet cues label individual predator species as dangerous or risky.

Functional diversity and redundancy of soft bottom communities in brackish waters areas: Local vs regional effects Charalampos Dimitriadis, Athanasios Evagelopoulos, Drosos Koutsoubas Show preview | PDF (502 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Spatial heterogeneity enhances the variability in functional traits arrangement. ► Functional redundancy remained invariable in both local and regional scales. ► Environmental factors were acting as environmental filters. ► Dominant species interactions induced negative effects on benthic functionality. ► Community functioning was governed by both biotic and environmental filters.

Aquaculture Journals Page: 241 of 331

Aquaculture Journals – Table of Contents

Do predation risk and food availability modify prey and mesopredator microhabitat selection in eelgrass (Zostera marina) habitat? Kelly J. Tait, Kevin A. Hovel Show preview | PDF (516 K) | Related articles | Related reference work articles Highlights ► We conduct habitat preference experiments for two types of seagrass fauna. ► We test how predation risk and food availability alter preference for microhabitat. ► A mesopredatory fish preferred high complexity seagrass to low complexity seagrass. ► Fish preference was unaltered by predation risk and food availability. ► Fish adjusted swimming behavior with habitat to obtain food while remaining cryptic.

Tissue-diet discrimination factors of isotopic ratios (∆δ13C and ∆δ15N) in two brittle star species: Effect of reproductive state, diet and tissue composition Aline Blanchet-Aurigny, Monique Guillou, Fabrice Pernet, Jean-Dominique Gaffet, Stanislas F. Dubois Show preview | PDF (1079 K) | Related articles | Related reference work articles Highlights ► Tissue-diet discrimination factors were investigated in two brittle star species. ► Unexpected negative Δδ13C and Δδ15N values were reported. ► Δδ13C and Δδ15N values ranged from -4.1 to 1.5‰ and from -1.8 to 4.0‰, respectively. ► Both diet quality and reproductive state affect isotopic tissue-diet discrimination. ► Suggested relationship between fractionation and isotopic signature of food sources.

Contrasting habitat use of diurnal and nocturnal fish assemblages in temperate Western Australia E.S. Harvey, J.J. Butler, D.L. McLean, J. Shand Show preview | PDF (496 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Nocturnal & diurnal fish assemblages were sampled in six benthic habitats. ► Nocturnal stereo-BRUVs samples were illuminated with red and white lighting. ► Four of the six benthic fish assemblages were different between day and night. ► White & red lights recorded different fish assemblages in four of the six habitats. ► More fish were recorded on samples with white light in comparison to red lights.

Erratum to “Behavioural differences in microhabitat use by damselfishes (Pomacentridae): Implications for reef fish biodiversity” [J. Exp. Mar. Biol. Ecol. 202 (1996) 85–95 FREE (1996) 85–95 end] Page 87 R.F.G. Ormond, J.M. Roberts, R.-Q. Jan Show preview | PDF (89 K) | Related articles | Related reference work articles

Picophytoplankton community from tropical marine biofilms S. Mitbavkar, Raghu C., Rajaneesh K.M., Pavan D. Show preview | PDF (1234 K) | Related articles | Related reference work articles Highlights ► Flow cytometric study of picophytoplankton in natural tropical marine biofilms. ► Picophytoplankton contribution to the total biofilm photosynthetic biomass was > 60%. ► Bacteria and picophytoplankton appeared within 5 min on the substrata. ► Picophytoplankton are the pioneer autotrophic members in the tropical marine biofilms.

Aquaculture Journals Page: 242 of 331

Aquaculture Journals – Table of Contents

Strengthening statistical usage in marine ecology Peter G. Beninger, Inna Boldina, Stelios Katsanevakis Show preview | PDF (379 K) | Related articles | Related reference work articles

Theunis Piersma, Jan A. van Gils,Editors, ,Review of “The Flexible Phenotype: A Body-Centred Integration of Ecology, Physiology, and Behavior” (2011) Oxford Univ. Press 238 pp.. Jonathon Stillman Show preview | PDF (115 K) | Related articles | Related reference work articles Previous – Top – Next

VOLUME 428, OCTOBER 2012 Website

Research articles

Using response-ratios for tests of physiological hypotheses in field experiments R.A. Coleman Show preview | PDF (205 K) | Related articles | Related reference work articles Highlights ►Response-ratios can measure spatio-temporal variation in a physiological variable. ►I used response-ratio analysis to test aggregation and limpet desiccation. ►Analyses show that aggregating does not influence desiccation. ►The log response-ratio approach results in a simpler analysis. ►Log response-ratios are a simple way to solve non-independence.

Mesoscale distribution of protozooplankton communities and their herbivory in the western Scotia Sea of the Southern Ocean during the austral spring Eun Jin Yang, Jung-Ho Hyun, Dongseon Kim, Jisoo Park, Sung-Ho Kang, Hyoung Chul Shin, SangHoon Lee Show preview | PDF (1630 K) | Related articles | Related reference work articles Highlights ► We investigated protozooplankton community and herbivory in the western Scotia Sea. ► Phytoplankton community clearly differed in different water masses. ► Distribution of protozooplankton governed by phytoplankton biomass and composition. ► Protozooplankton grazing is one of the loss processes affecting phytoplankton.

Photosynthetic responses of an intertidal alga to emersion: The interplay of intertidal height and meteorological conditions Morgane Lamote, Ladd E. Johnson, Yves Lemoine Show preview | PDF (527 K) | Related articles | Related reference work articles Highlights ► Physiology of an intertidal alga varied spatio-temporally at different shore levels. ► Changes in PAM fluorometric parameters were greater at higher shore levels. ► PAM fluorometric parameters changed more under sunny and windy conditions. ► Physiological responses correlated with measured rates of evaporation. ► Demographics (density and size) corresponded with patterns of physiological stress.

Aquaculture Journals Page: 243 of 331

Aquaculture Journals – Table of Contents

Ecophysiology of mesohyl creep in the demosponge Chondrosia reniformis (Porifera: Chondrosida) Dario Fassini, Lorenzo Parma, Iain C. Wilkie, Giorgio Bavestrello, Francesco Bonasoro, M. Daniela Candia Carnevali Show preview | PDF (1826 K) | Related articles | Related reference work articles Highlights ► We studied Chondrosia reniformis creeping phenomenon. ► We did field survey, field experiments and laboratories experiments. ► We found the phenomenon is seasonal and related to sea temperature. ► We found the sponge can exhibit some control on the phenomenon. ► The main factor trigging the phenomenon seems to be the instability of substratum.

First evidence of self-fertilization in a marine microturbellarian (Platyhelminthes) Marco Casu, Piero Cossu, Tiziana Lai, Fabio Scarpa, Daria Sanna, Gian Luca Dedola, Marco Curini-Galletti Show preview | PDF (585 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The reproductive strategy of an interstitial microturbellarian was investigated. ► Methods included breeding experiments and parentage analysis of offspring. ► Results showed that over 90% of offsprings were derived from selfing. ► The species occurs in microhabitats; selfing allows colonization by single specimens.

Influence of CO2-induced acidification on the reproduction of a key Arctic copepod Calanus glacialis Agata Weydmann, Janne E. Søreide, Slawomir Kwasniewski, Stephen Widdicombe Show preview | PDF (237 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We studied the impact of decreasing pH on the reproduction of a key Arctic copepod. ► Calanus glacialis seem resilient to predicted levels of seawater acidification. ► However, an extreme pH delayed its hatching and reduced hatching success. ► Synergistic effects of acidification and warming may impact Arctic ecosystems.

Increasing suspended sediment reduces foraging, growth and condition of a planktivorous damselfish Amelia S. Wenger, Jacob L. Johansen, Geoffrey P. Jones Show preview | PDF (328 K) | Related articles | Related reference work articles Highlights ► Foraging of a coral reef fish in different concentrations of suspended sediment was examined. ► Suspended sediment impairs foraging ability. ► Reduction in food consumption led to reduced growth and body condition. ► Massive mortality in high sediment.

Effects of temperature, body size, and chela loss on competition for a limited food resource between indigenous rock crab (Cancer irroratus Say) and recently introduced green crab (Carcinus maenas L.) Kyle Matheson, Patrick Gagnon Show preview | PDF (583 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 244 of 331

Aquaculture Journals – Table of Contents

► We studied competition between rock crab and green crab for one blue mussel. ► Effects of water temperature, rock crab size, and chela loss were tested. ► Green crab primarily grasped the mussel before rock crab in all treatments. ► Body size, but not chela loss, affected the ability of rock crab to win contests. ► Low temperature limits the ability of green crab to compete with rock crab.

The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo Sound, Antarctica and Tromsø Sound, Norway Andrew Martin, Andrew McMinn, Mark Heath, Else N. Hegseth, Ken G. Ryan Show preview | PDF (681 K) | Related articles | Related reference work articles Highlights ► The response of polar microalgae to increased temperature in the dark was examined. ► Elevated temperature had only a small effect on Antarctic and Arctic microalgae. ► Recovery occurred after long incubations at temperatures up to 10 °C above ambient. ► There was little evidence of storage carbohydrate draw dawn.

Previous – Top – Next

VOLUME 429, NOVEMBER 2012 Website

Research articles

The role of protein extracts in the induction of disease in Acanthaster planci Jairo Rivera-Posada, Leigh Owens, Ciemon F. Caballes, Morgan S. Pratchett Show preview | PDF (1012 K) | Related articles | Related reference work articles Open Access Article Highlights ► We examine protein extracts as novel methods to control A. planci. ► Peptone and ox gall are promising A. Planci control options. ► Protein extracts are better options to control A. planci when compared to current best practice. ► Allergic reactions are involved in the induction of disease in COTS.

Effect of temperature on the photosynthetic efficiency and morphotype of Phaeocystis antarctica Fraser Kennedy, Andrew McMinn, Andrew Martin Show preview | PDF (1123 K) | Related articles | Related reference work articles Highlights ► An ice tank mesocosm was used to grow experimental sea ice algae. ► The physiology and morphology of Phaeocystis antarctica was examined with respect to ice growth. ► Cells only grew at the ice/water interface where temperatures were lowest. ► Change in morphotypes was dependant on the presence of ice.

Effects of macroalgae on corals recovering from disturbance Dorothea Bender, Guillermo Diaz-Pulido, Sophie Dove Show preview | PDF (403 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 245 of 331

Aquaculture Journals – Table of Contents

► Regeneration in corals is variable and depends on coral and algal species involved. ► One out of four algal species caused mortality in one of two corals tested. ► Most algae did not hinder coral re-growth significantly.

Barnacle appendage plasticity: Asymmetrical response time-lags, developmental mechanics and seasonal variation Christopher J. Neufeld Show preview | PDF (393 K) | Supplementary content | Related articles | Related reference work articles Highlights ► A transplant experiment revealed longer response time‐lags than previously thought. ► Quiet-water barnacles took nearly twice as long to change leg length. ► Barnacles grew longer segments and added more segments to lengthen their legs. ► Barnacles changed appendage form seasonally consistent with adaptation to wave force.

Optimisation of baited remote underwater video sampling designs for estuarine fish assemblages William Gladstone, Steven Lindfield, Melinda Coleman, Brendan Kelaher Show preview | PDF (850 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Sampling designs of baited remote underwater video stations are rarely optimised. ► We developed an optimal, cost effective sampling methodology for BRUVS in . ► Sampling precision was improved by increasing soak time rather than replication. ► Five replicates of 90 min was optimal, exceeding most current BRUV designs.

Host‐specific reproductive benefits, host selection behavior and host use pattern of the pinnotherid crab Calyptraeotheres garthi Emiliano H. Ocampo, Jesús D. Nuñez, Maximiliano Cledón, J. Antonio Baeza Show preview | PDF (991 K) | Related articles | Related reference work articles Highlights ► The symbiotic crab Calyptraeotheres garthi inhabits two limpet hosts. ► We expected female crabs to display preferences for the higher quality host. ► However, females preferred the original host species regardless of the benefits. ► Host habituation might explain source-host fidelity. ► Solitary females appear to be sedentary and males might use a pure-search strategy.

Predator-induced behavioral plasticity of juvenile red king crabs (Paralithodes camtschaticus) Benjamin Daly, Allan W. Stoner, Ginny L. Eckert Show preview | PDF (569 K) | Related articles | Related reference work articles Highlights ► Hatchery-cultured red king crabs have some degree of behavioral plasticity. ► Juvenile red king crabs respond to predators by increasing cryptic behavior. ► Enhanced red king crab crypsis depends on predator species. ► Conditioning with predators may allow quick adaptation to the natural environment.

Similarity between predator and prey fatty acid profiles is tissue dependent in Greenland sharks (Somniosus microcephalus): Implications for diet reconstruction Bailey C. McMeans, Michael T. Arts, Aaron T. Fisk Show preview | PDF (665 K) | Supplementary content

Aquaculture Journals Page: 246 of 331

Aquaculture Journals – Table of Contents

| Related articles | Related reference work articles Highlights ► Greenland shark muscle fatty acids were similar to prey fatty acid profiles. ► Shark liver fatty acids differed the most in magnitude from those of prey. ► Shark blood plasma fatty acids were more similar to shark muscle than liver. ► Shark liver fatty acids were the most variable among individuals.

Revisiting the ontogenetic shift paradigm: The case of juvenile green turtles in the SW Atlantic Victoria González Carman, Valeria Falabella, Sara Maxwell, Diego Albareda, Claudio Campagna, Hermes Mianzan Show preview | PDF (1060 K) | Related articles | Related reference work articles Highlights ► Green turtle is known to be strictly neritic and herbivore after the ontogenetic shift. ► Highly used areas of immature turtles from the SW Atlantic is studied. ► Turtles fed in neritic and oceanic areas that lack from an herviborous diet offer. ► Turtles did not comply with the tenets of an abrupt and irreversible shift. ► Turtles were able to adapt their behavior to local environmental conditions.

Previous – Top – Next

VOLUME 430-431, NOVEMBER 2012 Website

Research articles

Tests of an experimental unbaited video lander as a marine fish survey tool for high-relief deepwater rocky reefs Robert W. Hannah, Matthew T.O. Blume Show preview | PDF (1441 K) | Related articles | Related reference work articles Highlights ► An unbaited video lander was tested as a survey tool for deepwater rocky reefs. ► The design used breakaway components to aid the retrieval of undamaged equipment. ► Field tests showed high retrievability. ► Differences in species assemblages, abundance and habitat associations were shown.

VideoSolo, an autonomous video system for high-frequency monitoring of aquatic biota, applied to coral reef fishes in the Glorioso Islands (SWIO) Pascale Chabanet, Nicolas Loiseau, Jean-Lambert Join, Dominique Ponton Show preview | PDF (530 K) | Related articles | Related reference work articles Highlights ► We present a new autonomous underwater video system. ► The system is easy to deploy, fully autonomous during 2 months. ► We showed its relevance through reef fish population analysis in a remote place. ► Fish assemblages were variable over time (between hours, days, years). ► These results have implications for monitoring studies.

Differential gene expression in juvenile polyps of the coral Acropora tenuis exposed to thermal and chemical stresses Ikuko Yuyama, Yoshihiko Ito, Toshiki Watanabe, Michio Hidaka, Yoshimi Suzuki, Mutsumi Nishida

Aquaculture Journals Page: 247 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (595 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The effects of thermal and chemical stresses on coral juveniles were examined. ► We identified 19 genes whose expression changed by stress treatment. ► Some chaperon function proteins were identified from coral and the symbiont. ► Only oxidative stress- responsive protein was generally expressed by each stressor.

Boundary layer convective heating and thermoregulatory behaviour during aerial exposure in the rocky eulittoral fringe snail Echinolittorina malaccana David J. Marshall, Teddy Chua Show preview | PDF (745 K) | Related articles | Related reference work articles Highlights ► We explore convective heating and thermoregulatory behaviour in littorinid snails ► The boundary layer air (BLA) significantly heated snails in direct sunlight ► BLA heating was partially relieved by changing shell posture (standing) ► Standing was only induced by exposure to a thermal gradient in the BLA

Carbon and nitrogen assimilation in the Bering Sea clams Nuculana radiata and Macoma moesta Jared Weems, Katrin Iken, Rolf Gradinger, Matthew J. Wooller Show preview | PDF (769 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Bering Sea benthic clam response to changing sea ice algal production is unknown. ► Stable isotope analysis could be a useful tool in tracing ice algal in feeding clams. ► Isotopically labeled algae (C and N) assimilated into various clam samples. ► Assimilation rates and response differed among two species and experimental approach. ► Climate impacts on ice algal production could influence clam population dynamics.

Dibutyltin (DBT) an endocrine disrupter in zebrafish Courtney L. McGinnis, P.C. Encarnacao, Joseph F. Crivello Show preview | PDF (335 K) | Related articles | Related reference work articles Highlights ► DBT is an endocrine disruptor in zebrafish. ► In vivo, DBT exposure decreases zfCYP19a, zfERβ1 and FST mRNA in the gonads. ► In vitro, DBT exposure inhibits testosterone induced luciferase activity. ► In vitro, DBT exposure increases ethinylestradiol induced luciferase activity. ► DBT's MOA is complex and may be due to the metabolism of DBT to MBT.

Recognition of individual knobby sea stars Protoreaster nodosus (L., 1758) using aboral surface characteristics C.K. Chim, K.S. Tan Show preview | PDF (2303 K) | Related articles | Related reference work articles Highlights ► We developed a non-invasive method to recognise individuals of Protoreaster nodosus. ► Photo-identification was based on colouration, arm condition and number of tubercles. ► A large number of individuals could be recognised. ► Characters used proved to be reliable, durable and robust. Aquaculture Journals Page: 248 of 331

Aquaculture Journals – Table of Contents

The heterogeneous spatial and temporal patterns of behavior of small pelagic fish in an array of Fish Aggregating Devices (FADs) M. Capello, M. Soria, P. Cotel, G. Potin, L. Dagorn, P. Fréon Show preview | PDF (603 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We analyzed behavior of bigeye scad in an array of Fish Aggregating Devices (FADs). ► A leading FAD emerged, with the majority of visits and longer residence times. ► Fish associated at daytime and explored the array at nighttime. ► The diel variability in the residence times was amplified at the leading FAD. ► Social interactions and environmental factors could explain the observed patterns.

Reduced expression of the rate-limiting carbon fixation enzyme RuBisCO in the benthic foraminifer Baculogypsina sphaerulata holobiont in response to heat shock Steve S. Doo, Anderson B. Mayfield, Maria Byrne, Hung-Kai Chen, Hong D. Nguyen, Tung- Yung Fan Show preview | PDF (363 K) | Related articles | Related reference work articles Highlights ► One of the first documentation of protein expression in a foraminifer. ► Observed decreased RuBisCO expression in response to heat shock. ► Techniques may be utilized to gain new insight into mechanisms of species persistence.

Downstream migration patterns of one-year-old hatchery-reared European sturgeon (Acipenser sturio) M.L. Acolas, E. Rochard, C. Le Pichon, E. Rouleau Show preview | PDF (1475 K) | Related articles | Related reference work articles Highlights ► Acoustic telemetry tools highlighted three main downstream migration patterns. ► Trajectory variability could be explained by diet or salinity preference. ► Variability in exploratory behaviour is encouraging for such stocking program. ► No diel influence was highlighted in distance, swimming speed, trajectory orientation.

Testing vacancy chain predictions in Pagurus longicarpus hermit crabs: Does ecological gain and behavioral motivation match environmental context? Sara K. Edquist, Randi D. Rotjan Show preview | PDF (813 K) | Related articles | Related reference work articles Highlights ► Hermit crabs compete for gastropod shell shelters. ► Snail-inhabited, crab-inhabited, and empty shells vary with habitat. ► Social shell decision patterns also vary with habitat. ► Despite clear habitat differences, shell switching patterns were similar. ► Relative (not absolute) differences in shell quality may dictate switch dynamics.

Corrigendum to “Temperature and dissolved oxygen requirements for survival of yellowfin tuna, Thunnus albacares, larvae” [J. Exp. Mar. Biol. Ecol. 404 (1–2), 63–72] Show preview | PDF (181 K) | Related articles | Related reference work articles Aquaculture Journals Page: 249 of 331

Aquaculture Journals – Table of Contents

Previous – Top – Next

VOLUME 432-433, NOVEMBER 2012 Website

Research articles

This issue is In Progress but contains articles that are final and fully citable. For recently accepted articles, see Articles in Press.

Predator and flow influence on bivalve clam excurrent jet characteristics S.K. Delavan, D.R. Webster Show preview | PDF (446 K) | Related articles | Related reference work articles Highlights ► Presence/absence of predators influences the fluctuating component of jet velocity. ► Predators increase variance and amount of randomness in clam jet velocities. ► Predator presence/absence does not control the clam response to the ambient velocity.

Hydrophone detects cracking sounds: Non-intrusive monitoring of bivalve movement Lucia Di Iorio, Cédric Gervaise, Virginie Jaud, Anthony A. Robson, Laurent Chauvaud Show preview | PDF (850 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Scallop valve adduction movements produce sounds with specific acoustic features. ► Scallop coughing sounds are detectable in natural ambient noise (3–25 m2). ► Movements of a subtidal motile species can be studied over the long term in situ. ► Passive acoustics as new non-intrusive, high-resolution bivalve monitoring method. ► Passive acoustics as a potential proxy for the scallop as ecosystem sentinel.

Below- and above-ground vertebrate herbivory and abiotic factors alternate in shaping salt-marsh plant communities D.P.J. Kuijper, J.P. Bakker Show preview | PDF (1077 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We tested effects of above- and below-ground herbivory on salt-marsh vegetation. ► Additionally, we applied nitrogen fertilization and estimated sediment input. ► Effects of below-ground herbivores and fertilization varied between years. ► Both factors were overruled by sporadic high sediment accumulation. ► Effects of herbivory and abiotic factors alternated in shaping vegetation dynamics.

Aggregated prey and predation rates: Juvenile shore crabs (Carcinus maenas) foraging on post-larval cockles (Cerastoderma edule) Timothy A. Whitton, Stuart R. Jenkins, Christopher A. Richardson, Jan G. Hiddink Show preview | PDF (687 K) | Related articles | Related reference work articles Highlights ► The effect of prey arrangement and predator interference competition was studied. ► Mortality of prey was highest when aggregated compared to uniformly dispersed. ► Interference competition between predators was similar for both prey arrangements. ► Dispersed prey had higher survival under single and multiple crab predation.

Aquaculture Journals Page: 250 of 331

Aquaculture Journals – Table of Contents

Pelagic or insular? Genetic differentiation of rough-toothed dolphins in the Society Islands, French Polynesia Marc Oremus, M. Michael Poole, G. Renee Albertson, C. Scott Baker Show preview | PDF (1078 K) | Related articles | Related reference work articles Highlights ► We investigated population dynamics of a pelagic dolphin in the Society Islands. ► Photographic and genetic recaptures of Steno bredanensis suggest island site fidelity. ► Strong genetic structure was found between two neighbour islands. ► This species forms small insular communities pointing out conservation issues. ► Other pelagic species of dolphins may follow this pattern near oceanic islands.

Genetic assessment of the population connectivity of the red urchin (Strongylocentrotus franciscanus) Celeste E. Benham, K. Janine Supernault, Ronald S. Burton Show preview | PDF (466 K) | Related articles | Related reference work articles Highlights ► Microsatellites were used to examine the population connectivity of the red urchin. ► Significant population differentiation was found between California and Canada. ► No significant population differentiation was found within California. ► This is the first evidence of isolation by distance in S. franciscanus.

Pelagic longline fishing trials to shape a mitigation device of the depredation by toothed whales Njaratiana Rabearisoa, Pascal Bach, Paul Tixier, Christophe Guinet Show preview | PDF (1171 K) | Related articles | Related reference work articles Highlights ► We design an innovative toothed whale depredation mitigation device. ► Our device aims at physically protecting longline-caught fish. ► We report an important toothed whale depredation rate. ► We face some operational constraints when trying to routinely deploy our devices. ► We need to improve our devices but our results are nevertheless promising.

Thermal priming affects symbiont photosynthesis but does not alter bleaching susceptibility in Acropora millepora Rachael Middlebrook, Kenneth R.N. Anthony, Ove Hoegh-Guldberg, Sophie Dove Show preview | PDF (843 K) | Related articles | Related reference work articles Highlights ► We examine the effect of a thermal priming event on subsequent coral bleaching. ► The onset of thermal bleaching was not altered by the priming event. ► Photosynthetic productivity and pigments were altered by the priming event. ► Pre-stressed corals were able to dump greater amounts of light energy as heat.

Glacial refugium versus range limit: Conservation genetics of Macoma Balthica, a key species in the Bay of Biscay (France) V. Becquet, B. Simon-Bouhet, E. Pante, H. Hummel, P. Garcia Show preview | PDF (648 K) | Supplementary content | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 251 of 331

Aquaculture Journals – Table of Contents

► Provides one of a few rare examples of a marine glacial refugium in the Bay of Biscay. ► Documents high genetic diversity at southern species range limit in Macoma balthica. ► Describes incongruent mitochondrial and nuclear spatial population structure. ► Evidences a precedently-undocumented barrier to gene flow around the Loire Estuary. ► Hypothesizes the presence of a novel hybrid zone among southern populations of Macoma.

Evaluating ontogenetic patterns of habitat use by reef fish in relation to the effectiveness of marine protected areas in West Hawaii Delisse M. Ortiz, Brian N. Tissot Show preview | PDF (1111 K) | Related articles | Related reference work articles Highlights ► First study examining ontogenetic habitats shifts of multiple fishes relative to MPA effectiveness. ► Novel approach examining available habitats relative to MPA effectiveness. ► Species remained or shifted to either more or less structure habitats ontogenetically. ► Spatial characteristics of the MPAs (i.e., reef size) important in designing MPAs.

Biological traits analyses in the study of pollution gradients and ecological functioning of marine soft bottom species assemblages in a fjord ecosystem Eivind Oug, Annelise Fleddum, Brage Rygg, Frode Olsgard Show preview | PDF (655 K) | Related articles | Related reference work articles Highlights ► Functional features change along gradients in contaminants and sediment structure. ► Distinct patterns for mobility, size, sediment dwelling depth and feeding. ► Subsurface deposit feeding is prominent at high levels of contaminants. ► Method to assess effects of pollutants on ecological functioning of soft bottom fauna

Submerged swimming and resting metabolic rates in Southern sea lions M. Dassis, D.H. Rodríguez, E.N. Ieno, R.W. Davis Show preview | PDF (307 K) | Related articles | Related reference work articles Highlights ► Southern sea lions metabolic rate was measured using open flow respirometry. ► Resting metabolic rates were ca. 2–3 times Kleiber’s BMR prediction. ► Submerged swim metabolic rate was 6.8 times Kleiber’s BMR prediction. ► Cost of transport and cost per stroke were similar to other sea lions species.

Environmental evidence that seasonal hypoxia enhances survival and success of jellyfish polyps in the northern Gulf of Mexico Mary-Elizabeth C. Miller, William M. Graham Show preview | PDF (671 K) | Related articles | Related reference work articles Highlights ► We used a novel suite of experimental approaches in laboratory and field settings, ► Explored the influence of hypoxia on jellyfish life history strategies, ► Explored effects of a jellyfish-hypoxia relationship on benthic community structure, ► Present evidence that hypoxia can clear space for settlement of planula larvae, and ► Offer insight to mechanisms that may influence variability of jellyfish populations.

Effects of ultraviolet radiation on the growth, reproduction and survival of the lobate ctenophore Mnemiopsis leidyi in Chesapeake Bay Kristen A. Rathjen, Denise L. Breitburg, Patrick J. Neale

Aquaculture Journals Page: 252 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (878 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Examined effects of UVR on ctenophore growth, reproduction and survival. ► Near- surface levels of UVR in Chesapeake Bay negatively affects ctenophore size. ► Mnemiopsis leidyi has a sharp tolerance threshold to UVR. ► Determined a biological weighting function to describe spectral sensitivity.

Consistent movement traits indicative of innate behavior in neonate sharks Michelle R. Heupel, Colin A. Simpfendorfer, Esben M. Olsen, Even Moland Show preview | PDF (1149 K) | Related articles | Related reference work articles Highlights ► We utilize quantitative analysis of metrics to define fish movement. ► Metrics revealed increases in step length and more variable movement through time. ► Consistent patterns across naive cohorts indicate innate movement drivers. ► Quantitative movement metrics can define movement and highlight underlying patterns.

Characterisation of the physical and chemical properties influencing bacterial epibiont communities on benthic gelatinous egg masses of the pulmonate Siphonaria diemenensis Casey Peters, Geoffrey M. Collins, Kirsten Benkendorff Show preview | PDF (1239 K) | Related articles | Related reference work articles Highlights ► S. diemenensis egg masses support a bacterial community distinct from the substrate. ► The physical surface structure appears to favour coccoid bacteria. ► Antibacterial properties were found in extracts from the internal egg matrix. ► One bacterial epibiont B. psychrodurans was found to have antibacterial properties. ► Biofilms are influenced by physical, chemical and competitive interactions.

Shading decreases the abundance of the herbivorous California horn snail, Cerithidea californica Julio Lorda, Kevin D. Lafferty Show preview | PDF (516 K) | Related articles | Related reference work articles Highlights ► Shading by plants is an important ecological driver in the CA and Baja CA estuaries. ► We performed observational studies to study the effect of shade on the CA horn snail. ► Shading by plants and human-made structures reduces the density of benthic diatoms. ► Shading by plants and human-made structures reduces the CA horn snail densities.

The response of surf-zone phytoplankton to nutrient enrichment (Cassino Beach, Brazil) Fernanda Reinhardt Piedras, Clarisse Odebrecht Show preview | PDF (430 K) | Related articles | Related reference work articles

Habitat colonisation by amphipods: Comparison between native and alien algae Maite Vázquez-Luis, Joseph A. Borg, Pablo Sanchez-Jerez, Just T. Bayle-Sempere Show preview | PDF (656 K) | Related articles | Related reference work articles Highlights Aquaculture Journals Page: 253 of 331

Aquaculture Journals – Table of Contents

► We carried out field experiments on habitat colonisation of invasive vs. native algae. ► The alien algae affect species richness and abundance of Mediterranean amphipods. ► Total abundance and species richness of amphipods are lower in algal stands invaded by C. racemosa. ► Detritus seems to be an important factor for amphipod colonisation.

Dive behaviour of adult hawksbills (Eretmochelys imbricata, Linnaeus 1766) in the eastern Pacific Ocean highlights shallow depth use by the species Alexander R. Gaos, Rebecca R. Lewison, Bryan P. Wallace, Ingrid L. Yañez, Michael J. Liles, Andres Baquero, Jeffrey A. Seminoff Show preview | PDF (852 K) | Related articles | Related reference work articles Highlights ► First dive study of hawksbills in the eastern Pacific Ocean. ► Overwhelming majority of dives occurred at depths ≤ 10 m. ► Similar dive behaviour across diel time periods. ► Shallower dives exhibited during foraging, compared to inter-nesting and migration phases. ► Important implications for hawksbills management.

Experimental estimation of assimilation rates of meiofauna feeding on 14C- labelled benthic diatoms J. Rzeznik-Orignac, D. Fichet Show preview | PDF (727 K) | Related articles | Related reference work articles Highlights ► Meiofaunal assimilation rate was estimated with 14C labeled diatoms tracing. ► Meiofauna assimilates 0.8, copepods 1.9 and the around 1.3 ng C ind− 1 h− 1. ► Meiofauna would consume up to 12% of primary production in the Brouage mudflat.

Previous – Top – Next

Aquaculture Journals Page: 254 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff FFFiiissshhh BBBiiiooolllooogggyyy

VOLUME 80, PART 7, JUNE 2012 Website

Research articles

Identification of a transparent mutant tiger barb Puntius tetrazona and its use for in vivo observation of a Pleistophora sp. (Microsporidia) infection (pages 2393– 2404) K. B. Li, O. Q. Chang, F. Wang, C. Liu, Q. Wang, F. L. Liang, B. Y. Ma and S. Q. Wu Abstract Full Article (HTML) PDF(1309K) References

Reproductive biology of the spotback skate castelnaui in the south- west Atlantic Ocean (pages 2405–2419) J. C. Colonello, M. L. García, C. A. Lasta and R. C. Menni Abstract Full Article (HTML) PDF(1124K) References

Effect of acclimation temperature on the upper thermal tolerance of Colorado River cutthroat trout Oncorhynchus clarkii pleuriticus: thermal limits of a North American salmonid (pages 2420–2433) Z. E. Underwood, C. A. Myrick and K. B. Rogers Abstract Full Article (HTML) PDF(654K) References

Genetic divergence among invasive and native populations of Plagioscion squamosissimus (Perciformes, Sciaenidae) in Neotropical regions (pages 2434– 2447) R. S. Panarari-Antunes, A. J. Prioli, S. M. A. P. Prioli, V. N. Gomes, H. F. Júlio Jr., C. S. Agostinho, J. P. Silva Filho, T. A. Boni and L. M. Prioli Abstract Full Article (HTML) PDF(765K) References

Dietary ontogeny and niche shift to piscivory in lacustrine brown trout Salmo trutta revealed by stomach content and stable isotope analyses (pages 2448– 2462 FREE 2448–2462 ) H. Jensen, M. Kiljunen and P.-A. Amundsen Abstract Full Article (HTML) PDF(1079K) References

Molecular phylogeny of four morphologically similar Ostorhinchus taxa with specific comments on O. cf. properuptus dotted type (pages 2463– 2474 FREE 2463–2474 ) S. Y. V. Liu and C. F. Dai Abstract Full Article (HTML) PDF(797K) References

Does spatial variation in egg thiamine and fatty-acid concentration of Lake Michigan lake trout Salvelinus namaycush lead to differential early mortality syndrome and yolk oedema mortality in offspring? (pages 2475– 2493 FREE 2475–2493 ) S. J. Czesny, J. Rinchard, B.-J. Lee, K. Dabrowski, J. M. Dettmers and Y. Cao Abstract Full Article (HTML) PDF(727K) References

Maximum sustainable speed, energetics and swimming kinematics of a tropical carangid fish, the green jack Caranx caballus (pages 2494–2516 FREE 2494–2516 ) K. A. Dickson, J. M. Donley, M. W. Hansen and J. A. Peters Abstract Full Article (HTML) PDF(1101K) References

Aquaculture Journals Page: 255 of 331

Aquaculture Journals – Table of Contents

Behaviour of fish by-catch in the mouth of a crustacean trawl (pages 2517– 2527FREE 2517–2527 ) D. Queirolo, E. Gaete, I. Montenegro, M. C. Soriguer and K. Erzini Abstract Full Article (HTML) PDF(644K) References Supporting Information

Feeding ecology of indigenous and non-indigenous fish species within the family Sphyraenidae (pages 2528–2548 FREE 2528–2548 ) S. Kalogirou, F. Mittermayer, L. Pihl and H. Wennhage Abstract Full Article (HTML) PDF(1016K) References

Molecular phylogenetic relationships of pangasiid and schilbid in Thailand (pages 2549–2570FREE 2549–2570 ) W. Karinthanyakit and A. Jondeung Abstract Full Article (HTML) PDF(626K) References

Diet overlap among flatfish species in the southern North Sea (pages 2571– 2594 FREE 2571–2594 ) S. Schückel, A. F. Sell, I. Kröncke and H. Reiss Abstract Full Article (HTML) PDF(752K) References

Molecular identification of hybrids of the invasive gibel carp Carassius auratus gibelio and crucian carp Carassius carassius in Swedish waters (pages 2595– 2604 FREE 2595–2604 ) J. Wouters, S. Janson, V. Lusková and K. H. Olsén Abstract Full Article (HTML) PDF(695K) References

Identification and expression profiles of grass carp Ctenopharyngodon idella tlr7 in responses to double-stranded RNA and virus infection (pages 2605– 2622 FREE 2605–2622 ) C. Yang, J. Su, R. Zhang, L. Peng and Q. Li Abstract Full Article (HTML) PDF(1643K) References

BRIEF COMMUNICATIONS

Does light explain damselfish Chromis viridis abundances observed over coral colonies? (pages 2623–2628 FREE 2623–2628 ) D. Ponton, N. Loiseau and P. Chabanet Abstract Full Article (HTML) PDF(617K) References

The reproductive behaviour of Pogonophryne scotti confirms widespread egg- guarding parental care among Antarctic notothenioids (pages 2629– 2635 FREE 2629–2635 ) C. D. Jones and T. J. Near Abstract Full Article (HTML) PDF(856K) References

The effect of hypoxia on ventilation frequency in startled common sole Solea solea (pages 2636–2642 FREE 2636–2642 ) M. Cannas, P. Domenici and C. Lefrançois Abstract Full Article (HTML) PDF(539K) References

Identification and characterization of polymorphic microsatellite loci in the blue shark Prionace glauca, and cross-amplification in other shark species (pages 2643–2646 FREE 2643–2646 ) F. F. Mendonça, L. H. F. Ussami, D. T. Hashimoto, L. H. G. Pereira, F. Porto-Foresti, C. Oliveira, O. B. F. Gadig and F. Foresti

Aquaculture Journals Page: 256 of 331

Aquaculture Journals – Table of Contents

Abstract Full Article (HTML) PDF(463K) References

Book Review

ALL THE FISH IN THE SEA: MAXIMUM SUSTAINABLE YIELD AND THE FAILURE OF FISHERIES MANAGEMENT - Edited by C. Finley (pages 2647– 2648 FREE 2647–2648 ) STEPHEN J. LOCKWOOD Abstract Full Article (HTML) PDF(430K)

Corrigendum

Corrigendum (page 2649) Article first published online: 1 JUN 2012 | DOI: 10.1111/j.1095-8649.2012.03364.x This article corrects: A review of the application of molecular genetics for fisheries management and conservation of sharks and rays Abstract Full Article (HTML) PDF(418K)

Previous – Top – Next

VOLUME 81, PART 1, JULY 2012 Website

Research articles

In vitro characterization of calcium transport along the gastrointestinal tract of freshwater rainbow trout Oncorhynchus mykiss (pages 1–20) J. S. Klinck, A. Singh and C. M. Wood Abstract Full Article (HTML) PDF(893K) References

Large males fight and court more across a range of social environments: an experiment on the two spotted goby Gobiusculus flavescens (pages 21–34) S. Wacker, K. de Jong, E. Forsgren and T. Amundsen Abstract Full Article (HTML) PDF(592K) References

Environmental and lunar cues are predictive of the timing of river entry and spawning-site arrival in lake sturgeon Acipenser fulvescens (pages 35–53) P. S. Forsythe, K. T. Scribner, J. A. Crossman, A. Ragavendran, E. A. Baker, C. Davis and K. K. Smith Abstract Full Article (HTML) PDF(1014K) References Supporting Information

Development of the mandibular, hyoid arch and gill arch skeleton in the Chinese barb Puntius semifasciolatus: comparisons of ossification sequences among Cypriniformes (pages 54–80) A. J. Block and P. M. Mabee Abstract Full Article (HTML) PDF(1165K) References

The gene expression response of the catadromous perciform barramundi Lates calcarifer to an acute heat stress (pages 81–93) J. R. Newton, C. De Santis and D. R. Jerry Abstract Full Article (HTML) PDF(597K) References Supporting Information

Effects of stocking hatchery fish on the phenotype of indigenous populations in the amago salmon Oncorhynchus masou ishikawae in Japan (pages 94–109) K. Kawamura, M. Furukawa, M. Kubota and Y. Harada

Aquaculture Journals Page: 257 of 331

Aquaculture Journals – Table of Contents

Abstract Full Article (HTML) PDF(1168K) References

Molecular signature of the D-loop in the brown pencilfish Nannostomus eques (Characiformes, Lebiasinidae) reveals at least two evolutionary units in the Rio Negro basin, Brazil (pages 110–124) M. L. Terencio, C. H. Schneider and J. I. R. Porto Abstract Full Article (HTML) PDF(638K) References

Effects of gradual salinity increase on osmoregulation in Caspian roach Rutilus caspicus (pages 125–134) S. Malakpour Kolbadinezhad, A. Hajimoradloo, R. Ghorbani, H. Joshaghani and J. M. Wilson Abstract Full Article (HTML) PDF(542K) References

Walleye Sander vitreus and smallmouth bass Micropterus dolomieu interactions: an historic stable-isotope analysis approach (pages 135–147) B. J. Galster, M. R. Wuellner and B. D. S. Graeb Abstract Full Article (HTML) PDF(683K) References

Temporal dynamics in growth and white skeletal muscle composition of the mummichog Fundulus heteroclitus during chronic hypoxia and hyperoxia (pages 148–164) B. B. Rees, T. E. Targett, B. J. Ciotti, C. A. Tolman, S. S. Akkina and A. M. Gallaty Abstract Full Article (HTML) PDF(680K) References

Identification and expression analysis of major histocompatibility complex IIB gene in orange-spotted grouper Epinephelus coioides (pages 165–180) D. Q. Lu, S. B. Yi, M. Yao, Y. W. Li, X. C. Liu, Y. Zhang and H. R. Lin Abstract Full Article (HTML) PDF(800K) References

Identification of biomarkers indicative of barotrauma and recovery in melanops (pages 181–196) A. L. Pribyl, C. B. Schreck, S. J. Parker and V. M. Weis Abstract Full Article (HTML) PDF(566K) References

The effect of temperature on sperm motility and enzymatic activity in brown trout Salmo trutta, burbot Lota lota and grayling Thymallus thymallus (pages 197– 209) F. Lahnsteiner and N. Mansour Abstract Full Article (HTML) PDF(808K) References

Relationship between roving behaviour and the diet and client composition of the cleaner fish Labroides bicolor (pages 210–219) J. Oates, A. Manica, R. Bshary and A. S. Grutter Abstract Full Article (HTML) PDF(590K) References Supporting Information

Relationship between body size and habitat complexity preference in age-0 and - 1 year winter flounder Pseudopleuronectes americanus (pages 220–229) A. L. Pappal, R. A. Rountree and D. G. MacDonald Abstract Full Article (HTML) PDF(654K) References

Parasites as indicators of movement and population connectivity of a non- diadromous, tropical estuarine teleost: king threadfin Polydactylus macrochir (pages 230–252) B. R. Moore, D. J. Welch, S. J. Newman and R. J. G. Lester Abstract Full Article (HTML) PDF(640K) References

Aquaculture Journals Page: 258 of 331

Aquaculture Journals – Table of Contents

Mitochondrial DNA differentiation between the antitropical blue whiting species Micromesistius poutassou and Micromesistius australis (pages 253–269) K. A. T. Halvorsen, E. Árnason, P. J. Smith and J. Mork Abstract Full Article (HTML) PDF(747K) References

Differences in the induction of cyp1A and related genes in cultured rainbow trout Oncorhynchus mykiss. Additional considerations for the use of EROD activity as a biomarker (pages 270–287) A. Valdehita, M. L. Fernández-Cruz, F. Torrent, J. L. Sericano and J. M. Navas Abstract Full Article (HTML) PDF(723K) References Supporting Information

Gene flow and effective population size in two life-history types of broad whitefish Coregonus nasus from the Canadian Arctic (pages 288–307) L. N. Harris, E. B. Taylor, R. F. Tallman and J. D. Reist Abstract Full Article (HTML) PDF(714K) References

BRIEF COMMUNICATIONS

Geographic expansion of the invasive mud sleeper Butis koilomatodon (Perciformes: Eleotridae) in the western Atlantic Ocean (pages 308–313) R. M. Macieira, T. Giarrizzo, J. L. Gasparini and I. Sazima Abstract Full Article (HTML) PDF(793K) References

Effects of surgically implanted PIT tags on growth, survival and tag retention of yellow shortfin eels Anguilla australis under laboratory conditions (pages 314– 319) J. A. Hirt-Chabbert and O. A. Young Abstract Full Article (HTML) PDF(472K) References

Effectiveness of TaqMan probes for detection of fish eggs and larvae in the stomach contents of a teleost predator (pages 320–328) E. Hunter, N. Taylor, C. J. Fox, M. Maillard and M. I. Taylor Abstract Full Article (HTML) PDF(548K) References

Effect of the hydrostatic pressure on otolith growth of early juveniles of Nile tilapia Oreochromis niloticus (pages 329–334) A. T. Correia, A. M. Coimbra and A. Damasceno-Oliveira Abstract Full Article (HTML) PDF(476K) References

Cardiac remodelling of Atlantic halibut Hippoglossus hippoglossus induced by experimental anaemia with phenylhydrazine (pages 335–344) M. D. Powell, M. S. Burke and D. Dahle Abstract Full Article (HTML) PDF(556K) References

Temperature-dependent prey capture efficiency and foraging modes of brown trout Salmo trutta (pages 345–350) J. Watz, J. J. Piccolo, L. Greenberg and E. Bergman Abstract Full Article (HTML) PDF(602K) References

A new technique for obtaining mitotic chromosome spreads from fishes in the field (pages 351–357) D. R. Blanco, L. A. C. Bertollo, R. L. Lui, M. R. Vicari, V. P. Margarido, R. F. Artoni and O. Moreira-Filho Abstract Full Article (HTML) PDF(590K) References

Aquaculture Journals Page: 259 of 331

Aquaculture Journals – Table of Contents

Book Review

ATLAS OF LARVAE AND JUVENILES OF FRESHWATER FISHES OF RUSSIA - Edited by A. P. Makeyeva, D. S. Pavlov and D. A. Pavlov (pages 358–359) M. V. MINA Abstract Full Article (HTML) PDF(436K)

Previous – Top – Next

VOLUME 81, PART 2, JULY 2012 Website

Research articles

Fish Migration in the 21st Century: opportunities and challenges (pages 361– 364) J. Metcalfe and J. F. Craig Abstract Full Article (HTML) PDF(452K) References

The Anguilla spp. migration problem: 40 million years of evolution and two millennia of speculation (pages 365–386) D. Righton, K. Aarestrup, D. Jellyman, P. Sébert, G. van den Thillart and K. Tsukamoto Abstract Full Article (HTML) PDF(640K) References

Spawning migration of American eel Anguilla rostrata from pristine (1843–1872) to contemporary (1963–1990) periods in the St Lawrence Estuary, Canada (pages 387–407) G. Verreault, M. Mingelbier and P. Dumont Abstract Full Article (HTML) PDF(907K) References

Morphological and physiological changes of female tropical eels, Anguilla celebesensis and Anguilla marmorata, in relation to downstream migration (pages 408–426) S. Hagihara, J. Aoyama, D. Limbong and K. Tsukamoto Abstract Full Article (HTML) PDF(913K) References

Regional variation in otolith Sr:Ca ratios of African longfinned eel Anguilla mossambica and mottled eel Anguilla marmorata: a challenge to the classic tool for reconstructing migratory histories of fishes (pages 427–441) Y.-J. Lin, B. M. Jessop, O. L. F. Weyl, Y. Iizuka, S.-H. Lin, W.-N. Tzeng and C.-L. Sun Abstract Full Article (HTML) PDF(741K) References

Diverse migration strategy between freshwater and seawater habitats in the freshwater eel Anguilla (pages 442–455) T. Arai and N. Chino Abstract Full Article (HTML) PDF(734K) References

Partial migration in fishes: causes and consequences (pages 456–478) B. B. Chapman, K. Hulthén, J. Brodersen, P. A. Nilsson, C. Skov, L.-A. Hansson and C. Brönmark Abstract Full Article (HTML) PDF(592K) References

Partial migration in fishes: definitions, methodologies and taxonomic distribution (pages 479–499)

Aquaculture Journals Page: 260 of 331

Aquaculture Journals – Table of Contents

B. B. Chapman, C. Skov, K. Hulthén, J. Brodersen, P. A. Nilsson, L.-A. Hansson and C. Brönmark Abstract Full Article (HTML) PDF(595K) References

A critical life stage of the Atlantic salmon Salmo salar: behaviour and survival during the smolt and initial post-smolt migration (pages 500–542) E. B. Thorstad, F. Whoriskey, I. Uglem, A. Moore, A. H. Rikardsen and B. Finstad Abstract Full Article (HTML) PDF(675K) References

Physiological mechanisms of imprinting and homing migration in Pacific salmon Oncorhynchus spp. (pages 543–558) H. Ueda Abstract Full Article (HTML) PDF(691K) References

Identification of olfactory receptor genes in Atlantic salmon Salmo salar (pages 559–575) K. A. Johnstone, K. P. Lubieniecki, B. F. Koop and W. S. Davidson Abstract Full Article (HTML) PDF(599K) References Supporting Information

Dead fish swimming: a review of research on the early migration and high premature mortality in adult Fraser River sockeye salmon Oncorhynchus nerka (pages 576–599) S. G. Hinch, S. J. Cooke, A. P. Farrell, K. M. Miller, M. Lapointe and D. A. Patterson Abstract Full Article (HTML) PDF(1074K) References

Quantitative methods for analysing cumulative effects on success: a review (pages 600–631) J. E. Johnson, D. A. Patterson, E. G. Martins, S. J. Cooke and S. G. Hinch Abstract Full Article (HTML) PDF(641K) References

Chum salmon Oncorhynchus keta respond to moonlight during homeward migrations (pages 632–641) E. I. Hasegawa Abstract Full Article (HTML) PDF(953K) References

A concept for improving Atlantic salmon Salmo salar smolt migration past hydro power intakes (pages 642–663) H. P. Fjeldstad, I. Uglem, O. H. Diserud, P. Fiske, T. Forseth, E. Kvingedal, N. A. Hvidsten, F. ØKland and J. Järnegren Abstract Full Article (HTML) PDF(1244K) References

Potential interactions between diadromous fishes of U.K. conservation importance and the electromagnetic fields and subsea noise from marine renewable energy developments (pages 664–695) A. B. Gill, M. Bartlett and F. Thomsen Abstract Full Article (HTML) PDF(879K) References

Migrations and movements of adult Chinese sturgeon Acipenser sinensis in the Yangtze River, China (pages 696–713) C. Y. Wang, Q. W. Wei, B. Kynard, H. Du and H. Zhang Abstract Full Article (HTML) PDF(1084K) References

Homing and group cohesion in Atlantic cod Gadus morhua revealed by tagging experiments (pages 714–727) H. Tamdrari, J.-C. Brêthes, M. Castonguay and D. E. Duplisea

Aquaculture Journals Page: 261 of 331

Aquaculture Journals – Table of Contents

Abstract Full Article (HTML) PDF(661K) References

Diel vertical migration of European hake Merluccius merluccius and associated temperature histories: insights from a pilot data-storage tagging (DST) experiment (pages 728–734) H. De Pontual, A. Jolivet, M. Bertignac and R. Fablet Abstract Full Article (HTML) PDF(825K) References

Archival tags reveal that Arctic charr Salvelinus alpinus and brown trout Salmo trutta can use estuarine and marine waters during winter (pages 735–749) J. L. A. Jensen and A. H. Rikardsen Abstract Full Article (HTML) PDF(1277K) References

Spawning migrations of the endemic Labeobarbus (Cyprinidae, Teleostei) species of Lake Tana, Ethiopia: status and threats (pages 750–765) W. Anteneh, A. Getahun, E. Dejen, F. A. Sibbing, L. A. J. Nagelkerke, M. De Graaf, T. Wudneh, J. Vijverberg and A. P. Palstra Abstract Full Article (HTML) PDF(972K) References

Can otolith elemental chemistry retrospectively track migrations in fully marine fishes? (pages 766–795) A. M. Sturrock, C. N. Trueman, A. M. Darnaude and E. Hunter Abstract Full Article (HTML) PDF(679K) References

The use of otolith chemistry to characterize diadromous migrations (pages 796– 825) B. D. Walther and K. E. Limburg Abstract Full Article (HTML) PDF(986K) References

Identifying migrations in marine fishes through stable-isotope analysis (pages 826–847) C. N. Trueman, K. M. MacKenzie and M. R. Palmer Abstract Full Article (HTML) PDF(959K) References

Migratory behaviour of a dominant detritivorous fish Prochilodus lineatus evaluated by multivariate biochemical and pollutant data (pages 848–865) E. D. Speranza, N. Cappelletti, M. C. Migoya, L. M. Tatone and J. C. Colombo Abstract Full Article (HTML) PDF(844K) References

Diversity in migratory patterns among Neotropical fishes in a highly regulated river basin (pages 866–881) M. C. Makrakis, L. E. Miranda, S. Makrakis, H. M. Fontes Júnior, W. G. Morlis, J. H. P. Dias and J. O. Garcia Abstract Full Article (HTML) PDF(1595K) References

Dining hall at sea: feeding migrations of nektonic predators to the eastern Patagonian Shelf (pages 882–902) A. Arkhipkin, P. Brickle, V. Laptikhovsky and A. Winter Abstract Full Article (HTML) PDF(4592K) References

Finding paradise: cues directing the migration of the waterfall climbing Hawaiian gobioid Sicyopterus stimpsoni (pages 903–920) G. Leonard, T. Maie, K. N. Moody, G. D. Schrank, R. W. Blob and H. L. Schoenfuss Abstract Full Article (HTML) PDF(938K) References

Aquaculture Journals Page: 262 of 331

Aquaculture Journals – Table of Contents

Previous – Top – Next

VOLUME 81, PART 3, AUGUST 2012 Website

Research articles

Ova fecundity in Scottish Atlantic salmon Salmo salar: predictions, selective forces and causal mechanisms (pages 921–938) P. J. Bacon, J. C. MacLean, I. A. Malcolm and W. S. C. Gurney Abstract Full Article (HTML) PDF(1238K) References Supporting Information

First cytogenetic studies of the genus Heptapterus (Actinopterygii, Siluriformes): karyotype differentiation and review of cytogenetic data on the Heptapteridae family (pages 939–953) C. F. Yano and V. P. Margarido Abstract Full Article (HTML) PDF(659K) References

The incomplete history of mitochondrial lineages between two rockfishes, Sebastes longispinis and Sebastes hubbsi (: Scorpaenidae) (pages 954–965) Y. Kai, K.-D. Park and T. Nakabo Abstract Full Article (HTML) PDF(822K) References

Boldness and aggressiveness in early and late hatched three-spined sticklebacks Gasterosteus aculeatus (pages 966–976) M. L. Ruiz-Gomez and F. A. Huntingford Abstract Full Article (HTML) PDF(558K) References

The effect of temperature on embryonic and yolk-sac larval development in the burbot Lota lota (pages 977–986) F. Lahnsteiner, M. Kletzl and T. Weismann Abstract Full Article (HTML) PDF(681K) References

Inside the heads of David and Goliath: environmental effects on brain morphology among wild and growth-enhanced coho salmon Oncorhynchus kisutch (pages 987–1002) A. Kotrschal, L. F. Sundström, D. Brelin, R. H. Devlin and N. Kolm Abstract Full Article (HTML) PDF(706K) References

Annotated list of demersal fishes occurring at Sedlo Seamount, Azores north- east central Atlantic Ocean (pages 1003–1018) G. M. Menezes, A. Rosa, O. Melo and F. Porteiro Abstract Full Article (HTML) PDF(677K) References

Dietary preference and feeding selectivity of common dragonet Callionymus lyra in U.K. (pages 1019–1031) R. Griffin, B. Pearce and R. D. Handy Abstract Full Article (HTML) PDF(554K) References

‘Better off alone than in bad company’: agonistic colour display in mimetic juveniles of two ephippid species (pages 1032–1042) B. Barros, Y. Sakai, H. Hashimoto, K. Gushima and M. Vallinoto Abstract Full Article (HTML) PDF(685K) References Supporting Information

Aquaculture Journals Page: 263 of 331

Aquaculture Journals – Table of Contents

Metabolic and cardiorespiratory responses of summer flounder Paralichthys dentatus to hypoxia at two temperatures (pages 1043–1058) K. M. Capossela, R. W. Brill, M. C. Fabrizio and P. G. Bushnell Abstract Full Article (HTML) PDF(690K) References

Spatial distribution correspondence of a juvenile Atlantic salmon Salmo salar cohort from age 0+ to 1+ years (pages 1059–1069) A. Foldvik, M. A. K. Teichert, S. Einum, A. G. Finstad, O. Ugedal and T. Forseth Abstract Full Article (HTML) PDF(666K) References

Diet and feeding strategy of thornback ray Raja clavata (pages 1070–1084) M. Šantić, B. Rađa and A. Pallaoro Abstract Full Article (HTML) PDF(860K) References

Aspects of the biology of Galaxias maculatus (pages 1085–1100) L. J. B. Laurenson, R. P. French, P. Jones, D. Ierodiaconou, S. Gray, V. L. Versace, A. Rattray, S. Brown and J. Monk Abstract Full Article (HTML) PDF(823K) References

Embryonic development in ballan wrasse Labrus bergylta (pages 1101–1110) J. D’Arcy, E. Dunaevskaya, J. W. Treasurer, O. Ottesen, J. Maguire, N. Zhuravleva, A. Karlsen, C. Rebours and R. D. FitzGerald Abstract Full Article (HTML) PDF(728K) References

Behavioural fever boosts the inflammatory response in rainbow trout Oncorhynchus mykiss (pages 1111–1117) A. Gräns, M. Rosengren, L. Niklasson and M. Axelsson Abstract Full Article (HTML) PDF(702K) References

The chemical cues of male sea lice Lepeophtheirus salmonis encourage others to move between host Atlantic salmon Salmo salar (pages 1118–1123) J. F. Stephenson Abstract Full Article (HTML) PDF(494K) References

The in vitro blood-O2 affinity of triploid rainbow trout Oncorhynchus mykiss at different temperatures and CO2 tensions (pages 1124–1132) C. Verhille and A. P. Farrell Abstract Full Article (HTML) PDF(616K) References

First record of the deep-water whalefish Cetichthys indagator (Actinopterygii: Cetomimidae) in the North Atlantic Ocean (pages 1133–1137) R. P. Vieira, B. Christiansen, S. Christiansen and J. M. S. Gonçalves Abstract Full Article (HTML) PDF(643K) References

Aspects of the biology of the pygmy ribbontail catshark Eridacnis radcliffei (Proscylliidae: Carcharhiniformes) from the south-west coast of India (pages 1138–1144) K. V. Akhilesh, K. K. Bineesh, W. T. White and N. G. K. Pillai Abstract Full Article (HTML) PDF(583K) References

PRACTICAL FLATFISH CULTURE AND STOCK ENHANCEMENT - Edited by H. V. Daniels and W. O. Watanabe (pages 1145–1146) M. T. Dinis Abstract Full Article (HTML) PDF(435K) Previous – Top – Next

Aquaculture Journals Page: 264 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff FFFiiissshhh DDDiiissseeeaaassseeesss

VOLUME 35, PART 7, JULY 2012 Website

Research articles

A novel genotyping technique for distinguishing between Flavobacterium psychrophilum isolates virulent and avirulent to ayu, Plecoglossus altivelis altivelis (Temminck & Schlegel) (pages 471–480) E Fujiwara-Nagata, J Ikeda, K Sugahara and M Eguchi Abstract Full Article (HTML) PDF(293K) References

Development of a novel PCR assay based on the 16S–23S rRNA internal transcribed spacer region for the detection of Lactococcus garvieae (pages 481– 487) H T Dang, H K Park, S C Myung and W Kim Abstract Full Article (HTML) PDF(262K) References

Development of a multiplex polymerase chain reaction to detect five common Gram-negative bacteria of aquatic animals (pages 489–495) M-A Tsai, P-Y Ho, P-C Wang, Y-J E, L-L Liaw and S-C Chen Abstract Full Article (HTML) PDF(254K) References

A low prevalence of mycobacteria in freshwater fish from water reservoirs, ponds and farms (pages 497–504) V Mrlik, M Slany, J Kubecka, J Seda, A Necas, V Babak, I Slana, P Kriz and I Pavlik Abstract Full Article (HTML) PDF(173K) References

Peracetic acid is effective for controlling fungus on channel catfish eggs (pages 505–511) D L Straus, T Meinelt, B D Farmer and A J Mitchell Abstract Full Article (HTML) PDF(281K) References

Treatment of vibriosis in European sea bass larvae, Dicentrarchus labrax L., with oxolinic acid administered by bath or through medicated nauplii of Artemia franciscana (Kellogg): efficacy and residual kinetics (pages 513–522) M Touraki, I Niopas and V. Karagiannis Abstract Full Article (HTML) PDF(275K) References

Persistence of viral RNA in fish infected with VHSV-IVb at 15 °C and then moved to warmer temperatures after the onset of disease (pages 523–528) A E Goodwin, G E Merry and A D Noyes Abstract Full Article (HTML) PDF(242K) References

Comparative proteomic analysis of virulent and rifampicin-attenuated Flavobacterium psychrophilum (pages 529–539) K Gliniewicz, K P Plant, S E LaPatra, B R LaFrentz, K Cain, K R Snekvik and D R Call Abstract Full Article (HTML) PDF(305K) References

Short Communications

Splenic mycobacteriosis in an Atlantic guitarfish, Rhinobatos lentiginosus Garman (pages 541–544)

Aquaculture Journals Page: 265 of 331

Aquaculture Journals – Table of Contents

E T Anderson, S Frasca Jr, M G Asakawa, M H Fatzinger, J Johnson, K Marchetere, L Goodale, G R Risatti and C A Harms Article first published online: 10 MAY 2012 | DOI: 10.1111/j.1365-2761.2012.01367.x Corrected by: Corrigendum: Corrigendum Vol. 35, Issue 9, 709, Article first published online: 7 AUG 2012 Abstract Full Article (HTML) PDF(188K) References

A strain of piscine myocarditis virus infecting Atlantic argentine, Argentina silus (Ascanius) (pages 545–547) T Tengs and I Böckerman Abstract Full Article (HTML) PDF(164K) References

Acute morbidity and mortality in invertebrates and fish following exposure to potassium-deficient saltwater (pages 549–553) C A Hadfield, L A Clayton, D K Cohrs and D S Murphy Abstract Full Article (HTML) PDF(146K) References

Previous – Top – Next

VOLUME 35, PART 8, AUGUST 2012 Website

Research articles

Diseases of north European wrasse (Labridae) and possible interactions with cohabited farmed salmon, Salmo salar L. (pages 555–562) J W Treasurer Abstract Full Article (HTML) PDF(164K) References

Enhancement of Hsp70 synthesis protects common carp, Cyprinus carpio L., against lethal ammonia toxicity (pages 563–568) Y Y Sung, R J Roberts and P Bossier Abstract Full Article (HTML) PDF(237K) References

Different approaches to expressing Edwardsiella tarda antigen GAPDH in attenuated Vibrio anguillarum for multivalent fish vaccines (pages 569–577) Y Zheng, Y Xiao, H Wu, Q Wang, J Xiao, Y Zhang and Q Liu Abstract Full Article (HTML) PDF(328K) References

Development of a quantitative real-time PCR for the detection of Tenacibaculum maritimum and its application to field samples (pages 579–590) E Fringuelli, P D Savage, A Gordon, E J Baxter, H D Rodger and D A Graham Abstract Full Article (HTML) PDF(386K) References

Effects on mortality and stress response in European sea bass, Dicentrarchus labrax (L.), fed mannan oligosaccharides (MOS) after Vibrio anguillarum exposure (pages 591–602) S Torrecillas, A Makol, M J Caballero, D Montero, A K S Dhanasiri, J Sweetman and M Izquierdo Abstract Full Article (HTML) PDF(324K) References

Suspected lead toxicosis in an electric eel, Electrophorus electricus (L.) (pages 603–606) L J Minter, M K Stoskopf, M Serrano, O Burrus and G A Lewbart Abstract Full Article (HTML) PDF(161K) References

Aquaculture Journals Page: 266 of 331

Aquaculture Journals – Table of Contents

Heterogeneity of Aeromonas populations in wild and farmed perch, Perca fluviatilis L. (pages 607–613) S E Burr, E Goldschmidt-Clermont, P Kuhnert and J Frey Abstract Full Article (HTML) PDF(437K) References

‘Branchiomycosis in tambaqui, Colossoma macropomum (Cuvier), from the eastern Brazilian Amazon’ (pages 615–617) W L A Pereira, A J S de Souza, Á M Gabriel, A M C Cardoso, S G B Monger, I C A Seligmann, A C A Pereira and D K S Queiroz Abstract Full Article (HTML) PDF(275K) References

Corrigendum

Corrigendum (page 619) Article first published online: 9 JUL 2012 | DOI: 10.1111/j.1365-2761.2012.01400.x This article corrects: Morphopathological features of a severe ulcerative disease outbreak associated with Tenacibaculum maritimum in cultivated sole, Solea senegalensis (L.) Vol. 35, Issue 6, 437–445, Article first published online: 16 APR 2012 Abstract Full Article (HTML) PDF(102K) References

Previous – Top – Next

VOLUME 35, PART 9, SEPTEMBER 2012 Website

Research articles

Fish immune responses against endoparasitic – experimental models (pages 623–635) K Buchmann Abstract Full Article (HTML) PDF(360K) References

Assessment of Aquaflor®, copper sulphate and potassium permanganate for control of Aeromonas hydrophila and Flavobacterium columnare infection in sunshine bass, Morone chrysops female × Morone saxatilis male (pages 637–647) A M Darwish, J A Bebak and K K Schrader Abstract Full Article (HTML) PDF(252K) References

Immunophysiology of Atlantic sturgeon, Acipenser oxyrinchus oxyrinchus (Mitchill), and the relationship to parasitic copepod, Dichelesthium oblongum (Abilgaard) infection (pages 649–660) M S Sokolowski, B A Allam, K J Dunton, M A Clark, E B Kurtz and M D Fast Abstract Full Article (HTML) PDF(297K) References

Phylogenetic analysis and molecular methods for the detection of lymphocystis disease virus from yellow perch, Perca flavescens (Mitchell) (pages 661–670) L J Palmer, N S Hogan and M R van den Heuvel Abstract Full Article (HTML) PDF(285K) References

Intraspecific diversity of Edwardsiella ictaluri isolates from diseased freshwater catfish, Pangasianodon hypophthalmus (Sauvage), cultured in the Mekong Delta, Vietnam (pages 671–682) K L Bartie, F W Austin, A Diab, C Dickson, T T Dung, M Giacomini and M Crumlish Abstract Full Article (HTML) PDF(341K) References

Aquaculture Journals Page: 267 of 331

Aquaculture Journals – Table of Contents

Identification and management of ocular lipid deposition in association with hyperlipidaemia in captive moray eels , Gymnothorax funebris Ranzani, Gymnothorax moringa (Cuvier) and Muraena retifera Goode and Bean (pages 683–693) A B Clode, C Harms, M H Fatzinger, F Young, C Colitz and D Wert Abstract Full Article (HTML) PDF(350K) References

Cavernous haemangioma in cultured olive barb, Puntius sarana (Hamilton) (pages 695–697) P K Sahoo, B R Mohanty, A Das, K D Mahapatra and J N Saha Abstract Full Article (HTML) PDF(246K) References

Immune response in the skin of zebrafish, Danio rerio (Hamilton), against Staphylococcus chromogenes (pages 699–704) A-J Lü, X-C Hu, Y Wang, Q-L Ming and H-X Hu Abstract Full Article (HTML) PDF(389K) References

First observations of conjoined twins in newborn seahorses, Hippocampus guttulatus Cuvier (pages 705–708) A Blanco, P Quintas and M Planas Abstract Full Article (HTML) PDF(256K) References

Corrigendum

Corrigendum (page 709) Article first published online: 7 AUG 2012 | DOI: 10.1111/j.1365-2761.2012.01411.x This article corrects: Splenic mycobacteriosis in an Atlantic guitarfish, Rhinobatos lentiginosus Garman Abstract Full Article (HTML) PDF(98K) References

Previous – Top – Next

Aquaculture Journals Page: 268 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff IIInnnvvveeerrrttteeebbbrrraaattteee PPPaaattthhhooolllooogggyyy

VOLUME 110, ISSUE 3, JULY 2012 Website

Research articles

Regular Articles

SIP Symposium on Resistance to Bt Crops Edited by Juan Ferre and Juan Luis Jurat-Fuentes

Founders' Lecture

Founders’ Lecture: John D. Briggs – The spirit of SIP Elizabeth W. Davidson Show preview | PDF (951 K) | Related articles | Related reference work articles Highlights ► John Briggs was a pioneer in the field of insect and invertebrate pathology. ► John Briggs expanded insect pathology through international collaborations. ► John Briggs was an outstanding mentor and administrator. SIP Symposium Articles on Resistance to Bt Crops

Evolution, ecology and management of resistance in Helicoverpa spp. to Bt cotton in Australia Sharon Downes, Rod Mahon Show preview | PDF (317 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Initial frequency of resistance alleles to Cry2Ab was 0.001 in Helicoverpa species. ► Within 7 years Cry2Ab resistance alleles in H. punctigera increased significantly. ► Cotton varieties producing Vip3A may help manage resistance to Cry proteins.

Aquaculture Journals Page: 269 of 331

Aquaculture Journals – Table of Contents

Field-evolved resistance to Bt maize by western corn rootworm: Predictions from the laboratory and effects in the field Aaron J. Gassmann Show preview | PDF (296 K) | Related articles | Related reference work articles Graphical abstract

Highlight ► Iowa field populations of western corn rootworm evolved resistance to Cry3Bb1 maize. ► Root injury to Cry3Bb1 maize was higher than to other types of Bt maize and to non-Bt maize treated with insecticide. ► Survival of western corn rootworm did not differ between Cry3Bb1 maize and non-Bt maize. ► Better IPM tactics are needed to delay Bt resistance in western corn rootworm.

Status of resistance to Bt maize in Spodoptera frugiperda: Lessons from Puerto Rico Nicholas P. Storer, Mary E. Kubiszak, J. Ed King, Gary D. Thompson, Antonio Cesar Santos Show preview | PDF (422 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Previously detected resistance to Cry1F maize populations of Spodoptera frugiperda persists in Puerto Rico but has not been detected in the mainland US. ► Laboratory bioassays of field-collected larvae confirmed resistance of 1000-fold. ► To delay the spread of resistance additional stewardship measures and new resistance management tools are needed for the future. Aquaculture Journals Page: 270 of 331

Aquaculture Journals – Table of Contents

Early detection of field-evolved resistance to Bt cotton in China: Cotton bollworm and pink bollworm Bruce E. Tabashnik, Kongming Wu, Yidong Wu Show preview | PDF (582 K) | Related articles | Related reference work articles Graphical abstract (left) Concentration of activated Bt toxin Cry1Ac killing 50% of cotton bollworm larvae (LC50 and 95% fiducial limits) from populations sampled in 2010 from northern China (black circles) and northwestern China (open circles); and by a susceptible laboratory strain (SCD, triangle) (). Resistance ratio: LC50 divided by the LC50 of the susceptible Shawan population. Asterisks indicate LC50 values significantly greater than the LC50 values of all three susceptible populations (SCD, Sc, and Sw). (right) Percentage of pink bollworm field populations in the Yangtze River Valley with survivors at the diagnostic concentration (9 μg Cry1Ac per ml diet) (). The number of field populations tested was 4 in 2005, 13 in 2006, 7 in 2007, 8 in 2008, 8 in 2009, and 11 in 2010.

Highlights ► Transgenic cotton producing Bt toxin Cry1Ac has been planted in China since 1997. ► Resistance to Cry1Ac has been detected in two major pests of cotton in China. ► Early detection of resistance may spur proactive countermeasures.

Bonamia exitiosa (Haplosporidia) observed infecting the European flat oyster Ostrea edulis cultured on the Spanish Mediterranean coast N. Carrasco, A. Villalba, K.B. Andree, M.Y. Engelsma, B. Lacuesta, A. Ramilo, I. Gairín, M.D. Furones Show preview | PDF (714 K) | Related articles | Related reference work articles Graphical abstract

Aquaculture Journals Page: 271 of 331

Aquaculture Journals – Table of Contents

Highlights ► A Flat oyster health survey was carried out in the Spanish Mediterranean coast. ► Marteilia sp. and Bonamia sp. parasites were detected by different techniques. ► SYBR Green real-time PCR allowed efficiently Bonamia detection. ► Phylogenetical studies corroborate the presence of Bonamia exitiosa. ► This is the first detection of B. exitiosa in the Spanish Mediterranean.

Genotypic variability and relationships between mite infestation levels, mite damage, grooming intensity, and removal of Varroa destructor mites in selected strains of worker honey bees (Apis mellifera L.) Ernesto Guzman-Novoa, Berna Emsen, Peter Unger, Laura G. Espinosa-Montaño, Tatiana Petukhova Show preview | PDF (200 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We tested honey bee genotypes for grooming behavior and varroa mite resistance. ► Grooming behavior is an important component in the resistance of honey bees to varroa

Aquaculture Journals Page: 272 of 331

Aquaculture Journals – Table of Contents

mites. ► The intensity with which bees perform it increases the proportion of mite removal.

Natural and cultured populations of the mangrove oyster Saccostrea palmula from Sinaloa, Mexico, infected by Perkinsus marinus Jorge Cáceres-Martínez, Mauricio García Ortega, Rebeca Vásquez-Yeomans, Teresa de Jesús Pineda García, Nancy A. Stokes, Ryan B. Carnegie Show preview | PDF (601 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► This is the first record of Perkinsus marinus infection in an oyster species from the genus Saccostrea. ► This is the first record of Perkinsus marinus presence in the State of Sinaloa, Mexico. ► Perkinsus marinus is infecting natural and cultured populations of S. palmula in Sinaloa, Mexico. ► No association of P. marinus infection in S. palmula and mortality was observed.

Scavenger deterrent factor (SDF) from symbiotic bacteria of entomopathogenic nematodes Baris Gulcu, Selcuk Hazir, Harry K. Kaya Show preview | PDF (455 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Aquaculture Journals Page: 273 of 331

Aquaculture Journals – Table of Contents

Susceptibility of Spodoptera frugiperda and S. exigua to Bacillus thuringiensis Vip3Aa insecticidal protein Maissa Chakroun, Yolanda Bel, Silvia Caccia, Lobna Abdelkefi-Mesrati, Baltasar Escriche, Juan Ferré Show preview | PDF (391 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Vip3Aa protoxin causes strong growth inhibition in Spodoptera frugiperda and S. exigua. ► S. frugiperda is less susceptible than S. exigua to the Vip3Aa protoxin. ► Both species are equally susceptible to the trypsin-activated Vip3Aa. ► S. frugiperda and S. exigua differ in the rate of Vip3Aa activation by midgut juice.

Susceptibility to infection and pathogenicity of White Spot Disease (WSD) in non-model crustacean host taxa from temperate regions K.S. Bateman, I. Tew, C. French, R.J. Hicks, P. Martin, J. Munro, G.D. Stentiford Show preview | PDF (2078 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Universal susceptibility to WSSV infection in a range of European decapod crustaceans. ► Relative degree of susceptibility varied significantly between host species. ► Susceptibility demonstrated via natural (feeding) and artificial (injection) routes.

Aquaculture Journals Page: 274 of 331

Aquaculture Journals – Table of Contents

Paenibacillus larvae 16S–23S rDNA intergenic transcribed spacer (ITS) regions: DNA fingerprinting and characterization Douglas W. Dingman Show preview | PDF (606 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Description of a molecular procedure for identification of P. larvae isolates. ► Discovery of three types of ITS regions (i.e., rrn operons) in P. larvae. ► For the isolates tested, P. larvae contained seven copies of rrn operons. ► The rrn operons were localized to half of P. larvae chromosome. ► Indications that the P. larvae isolates were closely linked phylogenetically.

Cardinium is associated with reproductive incompatibility in the predatory mite Metaseiulus occidentalis (Acari: Phytoseiidae) Ke Wu, Marjorie A. Hoy Show preview | PDF (291 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlight ► Cardinium causes nonreciprocal reproductive incompatibility in M. occidentalis. ► Cardinium+ M. occidentalis have no fecundity advantage over those free of Cardinium. ► Cardinium does not cause asexual reproduction in M. occidentalis. ► Cardinium is transmitted maternally.

Aquaculture Journals Page: 275 of 331

Aquaculture Journals – Table of Contents

Morphology and ultrastructure of the bacterial receptacle in Steinernema nematodes (Nematoda: Steinernematidae) Sam Kyu Kim, Yolanda Flores-Lara, S. Patricia Stock Show preview | PDF (2203 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► The morphology and size of the bacterial receptacles of 2-weeks old IJs varied across species. ► All examined species have a receptacle with an IVS usually composed of one cluster of acellular spheres. ► Species members of the ‘feltiae’ and ‘intermedium’ clades have a vesicle within the receptacle. ► Microvilli were present in the inner wall of the receptacle of most of the studied spp.

Experimental mixtures of Phthorimaea operculella granulovirus isolates provide high biological efficacy on both Phthorimaea operculella and Tecia solanivora (Lepidoptera: Gelechiidae) Carlos Espinel-Correal, Miguel López-Ferber, Jean-Louis Zeddam, Laura Villamizar, Juliana Gómez, Alba Marina Cotes, Xavier Léry Show preview | PDF (595 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► The genotypic heterogeneity of mixtures of virus isolates determined their efficacy. ► All the mixtures tested had a great efficacy on both Phthorimaea operculella and Tecia solanivora. ► The mixtures always showed higher pathogenicity than each constitutive isolates alone. ► Successive passages on hosts did not affect efficacy of virus mixtures over time.

Aquaculture Journals Page: 276 of 331

Aquaculture Journals – Table of Contents

Eicosanoid biosynthesis is activated via Toll, but not Imd signal pathway in response to fungal infection Jung-A Park, Yonggyun Kim Show preview | PDF (686 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Upon challenge of Beauveria bassiana, immune-associated PLA2s were significantly activated. ► RNAi of Toll or Imd signal pathway using dsRNAs specifically suppressed SeToll or SeRelish. ► dsRNA to SeToll significantly inhibited activation of PLA2, but dsRNA to SeRelish did not in the fungal infection.

A novel polydnaviral gene family, BEN, and its immunosuppressive function in larvae of Plutella xylostella parasitized by Cotesia plutellae Md. Ramjan Ali, Yonggyun Kim Show preview | PDF (1084 K) | Related articles | Related reference work articles Graphical abstract

Highlight ► Eleven BEN family genes of CpBV are expressed in parasitized host. ► Their expressions inhibit host immune response. ► Homologous BEN family genes are found in other bracoviral genomes. ► We propose a new functional gene family in polydnaviruses..

Aquaculture Journals Page: 277 of 331

Aquaculture Journals – Table of Contents

Attenuated reproduction of Strombus gigas by an Apicomplexa: Emeriidae-like parasite in the digestive gland Erick Baqueiro Cardenas, Jorge Montero, Liliane Frenkiel, Dalila Aldana Aranda Show preview | PDF (408 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Undifferentiated and reabsorption were correlated to higher number of Merozoites. ► Spawning coincides with the absence of Merozoites. ► The parasite could be a threat to Strombus gigas reproductive potential.

Natural occurrence of Zoophthora radicans (Entomophthorales: Entomophthoraceae) on Thaumastocoris peregrinus (Heteroptera: Thaumastocoridae), an invasive pest recently found in Brazil Gabriel Moura Mascarin, Vanessa da Silveira Duarte, Marcelo Mendes Brandão, Ítalo Delalibera Jr. Show preview | PDF (248 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Epizootics of Zoophthora radicans on populations of Thaumastocoris peregrinus was observed in Brazil. ► The fungus infected nymphs and adults of the bronze bug. ► This fungus is a promising candidate for biological control of this insect pest.

Aquaculture Journals Page: 278 of 331

Aquaculture Journals – Table of Contents

New Triatoma virus hosts in wild habitats of Argentina María Laura Susevich, Gerardo Aníbal Marti, María Soledad Serena, María Gabriela Echeverría Show preview | PDF (179 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Triatomines in the region of Argentina endemic for Chagas disease were sampled. ► Of 10 species of Triatominae captured T. infestans, T. delpontei and Ps. coreodes were infected with Triatoma virus. ► Ps. coreodes is a new host for TrV, increasing the number of susceptible species to 10. ► Sequence analysis indicated that Triatoma virus isolates were similar.

Low natural levels of Nosema ceranae in Apis mellifera queens Brenna E. Traver, Richard D. Fell Show preview | PDF (155 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We examined immature larval queens, virgin, and mated queens for Nosema ceranae. ► N. ceranae was detected at low levels in queens of all ages. ► No Nosema apis was detected in any sample.

Aquaculture Journals Page: 279 of 331

Aquaculture Journals – Table of Contents

Development and application of a novel histological multichrome technique for clam histopathology Pedro M. Costa, Maria H. Costa Show preview | PDF (1146 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► A novel efficient histological technique is proposed for clam histopathology on whole-soft body sections. ► The technique combines fixation in Carnoy’s fluid and a tetrachrome stain in paraffin sections. ► The procedure provides high quality and high contrast images for general-purpose histopathology.

Previous – Top– Next

VOLUME111, ISSUE 1, SEPTEMBER 2012 Website

Research articles

Current models of the mode of action of Bacillus thuringiensis insecticidal crystal proteins: A critical review Vincent Vachon, Raynald Laprade, Jean-Louis Schwartz Show preview | PDF (575 K) | Related articles | Related reference work articles Graphical abstract

Aquaculture Journals Page: 280 of 331

Aquaculture Journals – Table of Contents

Highlights ► The experimental bases for current models of Cry toxin mode of action are reviewed. ► Various data still support that Cry toxins act by forming pores. ► Most events that lead to Cry pore formation remain poorly understood.

Detection of Helicosporidium spp. in metagenomic DNA Norberto Mancera, Lauren G. Douma, Sheldon James, Stephanie Liu, Amy Van, Drion G. Boucias, Aurélien Tartar Show preview | PDF (713 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlights ► A culture independent protocol was designed to detect Helicosporidium sp. ► The protocol relied on genus-specific 18S rDNA gene primers. ► The primers were used on metagenomic DNA from lentic water habitats. ► Environmental sequences were confirmed as Helicosporidium via phylogenetic analyses.

Physiological performance of juvenile Haliotis rufescens and Haliotis discus hannai abalone exposed to the withering syndrome agent Roxana C. González, Katherina Brokordt, Karin B. Lohrmann Show preview | PDF (519 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Haliotis rufescens is more susceptible to the infection with WS-RLP than H. discus hannai. ► There is a negative correlation between infection level and food intake in H. rufescens. ► A negative correlation exists between infection level and metabolism in H. rufescens. ► The energy balance of H. rufescens infected with WS-RLP is negatively affected. ► The scope for growth of infected juvenile H. rufescens decreases 49%.

Aquaculture Journals Page: 281 of 331

Aquaculture Journals – Table of Contents

A study of diagnostic methods for Marteilioides chungmuensis infections in the Pacific oyster Crassostrea gigas Hee Jung Choi, Jee Youn Hwang, Dong Lim Choi, Min Do Huh, Myoung Ae Park Show preview | PDF (1045 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► The relative ability of diagnostic methods to detect M. chungmuensis was compared. ► Detection sensitivity was highest using ISH, followed by PCR and by histology. ► A combined PCR and ISH approach improved overall diagnostic rate.

Susceptibility of different developmental stages of large pine weevil Hylobius abietis (Coleoptera: Curculionidae) to entomopathogenic fungi and effect of fungal infection to adult weevils by formulation and application methods Minshad A. Ansari, Tariq M. Butt Show preview | PDF (918 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Late-instar and pupae of Hylobius abietis were more susceptible to entomopathogenic fungi than adult beetles. ► Isolates of Metarhizium robertsii and Metarhizium brunneum caused higher mortality to late-instar and pupae than Beauveria bassiana. ► Substrates and formulations (wet vs. dry) influence the susceptibility of adults. ► Dry conidia of M. robertsii ARSEF 4556 kill adult beetles faster than wet conidia on tissue paper. Aquaculture Journals Page: 282 of 331

Aquaculture Journals – Table of Contents

Characterization and virulence of Beauveria spp. recovered from emerald ash borer in southwestern Ontario, Canada Shajahan Johny, George Kyei-Poku, Debbie Gauthier, Kees van Frankenhuyzen, Peter J. Krell Show preview | PDF (1009 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlights ► We conducted a survey to search for entomopathogenic fungi infecting EAB populations in Canada. ► A total of 78 Beauveria isolates were retrieved from EAB cadavers. ► By molecular characterization the isolates were identified as B. bassiana and B. pseudobassiana. ► B. bassiana L49-1AA was the most virulent and produced more conidia than all isolates tested. ► L49-1AA has potential as a microbiological control agent for managing EAB field populations.

Experimental challenges of wild Manila clams with Perkinsus species isolated from naturally infected wild Manila clams Tsukasa Waki, Jun Shimokawa, Shinji Watanabe, Tomoyoshi Yoshinaga, Kazuo Ogawa Show preview | PDF (641 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Challenge experiments were successful against Manila clams with wild Perkinsus species. ► Wild isolates of Perkinsus species experimentally killed wild small Manila clams. ► Large clams were susceptible to Perkinsus species but tolerant against them.

Aquaculture Journals Page: 283 of 331

Aquaculture Journals – Table of Contents

Survey of pathogens and parasitoids of Popillia japonica (Coleoptera: Scarabaeidae) in northwest Arkansas B.M. Petty, D.T. Johnson, D.C. Steinkraus Show preview | PDF (470 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We estimated the prevalence of natural enemies of Popillia japonica. ► Stictospora villani was the most common natural enemy. ► Ovavesicula popilliae and nematodes were both present but uncommon. ► No parasitoids or Paenibacillus popilliae found in larval or adult beetles. ► First record of an Adelina sp. found infecting Japanese beetles.

Experimental evidence of metabolic disturbance in the white shrimp Penaeus vannamei induced by the Infectious Hypodermal and Hematopoietic Necrosis Virus (IHHNV) Diego Galván-Alvarez, Fernando Mendoza-Cano, Jorge Hernández-López, Arturo Sánchez- Paz Show preview | PDF (552 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► IHHNV causes high mortalities in the shrimp larvae and juveniles of Penaeus stylirostris. ► In Penaeus vannamei it causes permanent slow growth and deformities, but no mortalities are reported. ► The first investigation on the metabolic effects of the IHHNV infection in P. vannamei. ► The study shows compositional changes in plasma and hepatopancreas of shrimp. ► Changes suggest a temporal sequestration of host metabolic pathways by IHHNV to maximize its replication and propagation.

Aquaculture Journals Page: 284 of 331

Aquaculture Journals – Table of Contents

Nutritional limitation and resistance to opportunistic Aspergillus parasites in honey bee larvae Kirsten Foley, Géraldine Fazio, Annette B. Jensen, William O.H. Hughes Show preview | PDF (281 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Nutritional limitation increased mortality following Aspergillus fumigatus exposure. ► Survival increased in exposed larvae fed dandelion and mixed pollen supplements. ► The effect of diet on survival was dependent on the parasite species.

Evaluation of different culture media for the isolation and growth of the fastidious Vibrio tapetis, the causative agent of brown ring disease Sabela Balboa, Ana L. Dieguez, Alejandra Doce, Juan L. Barja, Jesús L. Romalde Show preview | PDF (541 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We evaluate the efficacy of 13 different media for growth and isolation of V. tapetis. ► Best growth of V. tapetis is obtained on MA and ASWT at 15 °C. ► Only MMA allows discrimination of typical V. tapetis strains from mixed populations. ► Bile salts inhibit the growth of the pathogen on selective media.

A preliminary evaluation of the potential of Beauveria bassiana for bed bug control Alexis M. Barbarin, Nina E. Jenkins, Edwin G. Rajotte, Matthew B. Thomas Show preview | PDF (441 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 285 of 331

Aquaculture Journals – Table of Contents

Graphical abstract

Highlights ► Beauveria bassiana used in this study proved to be pathogenic to bed bugs. ► B. bassiana was effective regardless of feeding status, sex, and strain. ► Jersey cotton provided a slightly faster rate of kill than paper substrate. ► Horizontal transfer of conidia is conferred via contact with infected individuals.

Production and characterization of monoclonal antibodies to the hemocytes of mud crab, Scylla serrata Brajendu Kumar, A. Deepika, M. Makesh, C.S. Purushothaman, K.V. Rajendran Show preview | PDF (384 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Monoclonal antibodies (MAbs) to hemocyte of crab, Scylla serrata were produced. ► Immunofluorescence assay using MAb showed strong reaction in granular hemocytes. ► Semigranular cells showed weak fluorescence and hyaline cells showed on reactivity. ► The MAbs showed cross-reactivity with hemocytes of other species of crabs.

Green algal infection of American horseshoe crab (Limulus polyphemus) exoskeletal structures Hillary Braverman, Louis Leibovitz, Gregory A. Lewbart Show preview | PDF (896 K) | Related articles | Related reference work articles Graphical abstract

Aquaculture Journals Page: 286 of 331

Aquaculture Journals – Table of Contents

Highlights ► Degenerative lesions caused by a green algae are documented in the horseshoe crab (Limulus polyphemus). ► The disease can lead to loss of tissue structure and function. ► Further research may explain how green algae overcome horseshoe crab immunity.

Determination of Cry toxin activity and identification of an aminopeptidase N receptor-like gene in Asymmathetes vulcanorum (Coleoptera: Curculionidae) Jorge Eduardo Cortázar Gómez, Silvio Alejandro López-Pazos, Jairo Cerón Show preview | PDF (989 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► We report a Cry toxin evaluation against Asymmathetes vulcanorum. ► Cry1B has activity against A. vulcanorum first instar larvae. ► An aminopeptidase N gene from A. vulcanourum midgut was cloned and sequenced.

Erratum

Erratum to “The scope of the crustacean immune system for disease control” [J. Invertebr. Pathol. 110 (2012) 251–260] Chris Hauton Show preview | PDF (583 K) | Related articles | Related reference work articles

Previous – Top– Next

Aquaculture Journals Page: 287 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff MMMiiicccrrrooobbbiiiooolllooogggiiicccaaalll MMMeeettthhhooodddsss

VOLUME 90, PART 2, AUGUST 2012 Website

Research articles

Development of a multiplex real-time PCR for contagious agalactia diagnosis in small ruminants Claire A.M. Becker, Fabien Ramos, Eric Sellal, Sandrine Moine, François Poumarat, Florence Tardy Show preview | PDF (333 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We developed a multiplex real-time PCR for contagious agalactiae diagnosis. ► The four etiological agents are included and differentially identified. ► Intra- and inter-species variability was assessed for assay design. ► The assay limit of detection is around 10 gene copies per reaction.

Rapid identification and antibiotic susceptibility testing of Yersinia pestis using bioluminescent reporter phage David A. Schofield, Ian J. Molineux, Caroline Westwater Show preview | PDF (437 K) | Related articles | Related reference work articles

Comparison of commercial molecular assays for toxigenic Clostridium difficile detection in stools: BD GeneOhm Cdiff, XPert C. difficile and illumigene C. difficile Céline Viala, Alban Le Monnier, Naouale Maataoui, Clotilde Rousseau, Anne Collignon, Isabelle Poilane Show preview | PDF (138 K) | Related articles | Related reference work articles

Effect of air drying on bacterial viability: A multiparameter viability assessment Andreas Nocker, Priscilla Sossa Fernández, Roy Montijn, Frank Schuren Show preview | PDF (728 K) | Related articles | Related reference work articles Highlights ► Bacteria are subjected to drying in the presence or absence of supplements. ► Viability and fitness are assessed using a multiparameter viability assay. ► Presence of magnesium chloride during desiccation greatly reduces viability. ► Presence of extracellular polysaccharides during desiccation increases viability. ► Fluorescent assays offer greater resolution than plate counting for moderate stress.

An alternative SEM drying method using hexamethyldisilazane (HMDS) for microbial cell attachment studies on sub-bituminous coal Nur Hazlin Hazrin-Chong, Mike Manefield Show preview | PDF (1161 K) | Related articles | Related reference work articles Highlights ► Biofilm formation on coal is of fundamental and applied interest in microbiology. ► We show that HMDS is a suitable drying agent for SEM imaging of biofilms on coal. ►

Aquaculture Journals Page: 288 of 331

Aquaculture Journals – Table of Contents

Alternative methods (e.g. critical point drying) are not suitable for coal samples. ► HMDS drying successfully generated SEM images in which cell morphology was intact.

Usefulness of Chromogenic CromoCen® AGN agar medium for the identification of the genus Aeromonas: Assessment of faecal samples M.G. Aguilera-Arreola, M.I. Portillo-Muñoz, C. Rodríguez-Martínez, G. Castro-Escarpulli Show preview | PDF (182 K) | Related articles | Related reference work articles Highlights ► Practical and reliable medium for Aeromonas could avoid incidence underestimation. ► Media that were tested with the ecometric technique showed satisfactory performance. ► Chromogenic medium was enabled to identify Aeromonas at the genus level. ► CromoCen® AGN has a relatively high plating efficiency for Aeromonas identification.

A self-ligation method for PCR-sequencing the telomeres of Streptomyces and Mycobacterium linear replicons Yun Fan, Yumei Dai, Qiuxiang Cheng, Guangjun Zhang, Dongshu Zhang, Ping Fang, Hang Wu, Linquan Bai, Zixin Deng, Zhongjun Qin Show preview | PDF (775 K) | Related articles | Related reference work articles

Molecular approaches for AM fungal community ecology: A primer Monika A. Gorzelak, Taylor C. Holland, Xiaoke Xing, Miranda M. Hart Show preview | PDF (247 K) | Related articles | Related reference work articles

An improved medium for growing Staphylococcus aureus biofilm Ping Chen, Johnathan J. Abercrombie, Nicole R. Jeffrey, Kai P. Leung Show preview | PDF (892 K) | Related articles | Related reference work articles Highlights ► BHI + 10% human plasma medium was developed for growing S. aureus biofilm in vitro. ► S. aureus forms robust biofilm in 6 h or less in a microfluidic system with this medium. ► Viability of S. aureus biofilm cells in static well plates is greatly enhanced with this medium. ► Human plasma is essential for growing S. aureus biofilms under static and flow conditions.

A gel-free proteomic-based method for the characterization of Bordetella pertussis clinical isolates Yulanda M. Williamson, Hercules Moura, Kaneatra Simmons, Jennifer Whitmon, Nikkol Melnick, Jon Rees, Adrian Woolfitt, David M. Schieltz, Maria L. Tondella, Edwin Ades, Jacquelyn Sampson, George Carlone, John R. Barr Show preview | PDF (939 K) | Related articles | Related reference work articles Open Access Article Highlights ► We describe a direct gel-free enzymatic method for B. pertussis proteomes. ► We describe an antibody-affinity capture method for B. pertussis proteomes. ► Information is useful for possible B. pertussis strain differentiation. ► Information is useful for possible improved B. pertussis diagnostics and vaccine. ► Methods described are applicable to characterization of other microbial proteomes.

High-resolution melting analysis for rapid detection of linezolid resistance (mediated by G2576T mutation) in Staphylococcus epidermidis

Aquaculture Journals Page: 289 of 331

Aquaculture Journals – Table of Contents

Emma M. Gabriel, Pierre E. Douarre, Siobhan Fitzgibbon, James Clair, Brigid Lucey, Aidan Coffey, Jim M. O'Mahony Show preview | PDF (440 K) | Related articles | Related reference work articles

Enhancement of BODIPY505/515 lipid fluorescence method for applications in biofuel-directed microalgae production Liam Brennan, Alfonso Blanco Fernández, Anika S. Mostaert, Philip Owende Show preview | PDF (730 K) | Related articles | Related reference work articles Highlights ► BODIPY505/515 staining of four biofuel-directed microalgae. ► Dynamic measurement of BODIPY505/515 up-take by algal cells. ► Enhanced BODIPY505/515 lipid staining for N. oculata.

Previous – Top – Next

VOLUME 90, PART 3, SEPTEMBER 2012 Website

Research articles

A carbon free filter for collection of large volume samples of cellular biomass from oligotrophic waters Brian J. Mailloux, Audra Dochenetz, Michael Bishop, Hailiang Dong, Lori A. Ziolkowski, K. Eric Wommack, Eric G. Sakowski, Tullis C. Onstott, Greg F. Slater Show preview | PDF (1149 K) | Related articles | Related reference work articles Highlights ► We developed a carbon free filter for radiocarbon analysis of cellular biomass. ► Made from Aluminum coated glass wool. ► The filter can run autonomously to collect large samples from oligotrophic waters. ► Utilized to collect samples from 1.3 km depth in a S. African goldmine. ► This filter should greatly expand the collection of PLFAs for radiocarbon analysis.

TRICORE, a novel bead-based specimen concentration method for the culturing of Mycobacterium tuberculosis Satoshi Mitarai, Ryouji Karinaga, Hiroyuki Yamada, Kazue Mizuno, Kinuyo Chikamatsu, Akio Aono, Tetsuhiro Sugamoto, Tomoyuki Hatano Show preview | PDF (399 K) | Related articles | Related reference work articles Highlights ► A noncentrifugation concentration method for M. tuberculosis was developed. ► Bead- based concentration method was evaluated for culture efficiency. ► Bead-based method is almost equivalent to centrifugation for liquid culture. ► Bead-based method shows higher sensitivity than centrifugation on solid media.

Magnetic capture hybridization of Batrachochytrium dendrobatidis genomic DNA David Rodriguez, Ana V. Longo, Kelly R. Zamudio Show preview | PDF (337 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 290 of 331

Aquaculture Journals – Table of Contents

► Batrachochytrium dendrobatidis (Bd) is responsible for massive amphibian declines. ► Low template concentrations and PCR inhibitors limit population studies of Bd. ► We combine magnetic capture hybridization with whole genome amplification. ► We recover Bd genetic material from low template frog skin swabs. ► This method will extend the usefulness of nonconsumptive field-collected swabs.

Comparison of the WST-8 colorimetric method and the CLSI broth microdilution method for susceptibility testing against drug-resistant bacteria Tadayuki Tsukatani, Hikaru Suenaga, Masanobu Shiga, Katsuya Noguchi, Munetaka Ishiyama, Takatoshi Ezoe, Kiyoshi Matsumoto Show preview | PDF (250 K) | Related articles | Related reference work articles Highlights ► A rapid determination method of consistent MIC for drug-resistant bacteria is developed. ► The proposed method is based on a colorimetric microbial viability assay. ► A long time is required to obtain consistent MICs in the broth microdilution method. ► There is excellent agreement between the MICs obtained with both methods.

A novel method for simultaneous Enterococcus species identification/typing and van genotyping by high resolution melt analysis Volker Gurtler, Danilla Grando, Barrie C. Mayall, Jenny Wang, Shahbano Ghaly-Derias Show preview | PDF (6527 K) | Supplementary content | Related articles | Related reference work articles Graphical abstract

Highlights ► van gene and rrn ISR HRM-PCR's were developed to type/identify Enterococcus faecium.. ► Validated with 1672 clinical isolates, 71 typed by PFGE and MLST and 18 ISR sequenced. ► vanB genotypes were detected in clinical isolates using standardised naming scheme. ► ISR instability made ISR typing more discriminatory than MLST but equal to PFGE. ► ISR identification stable and reliable in identifying E. faecium from E. faecalis.

Detection and identification of methicillin resistant and sensitive strains of Staphylococcus aureus using tandem measurements Rajesh Guntupalli, Iryna Sorokulova, Eric Olsen, Ludmila Globa, Oleg Pustovyy, Timothy Moore, Bryan Chin, James Barbaree, Vitaly Vodyanoy Show preview | PDF (1220 K) | Related articles | Related reference work articles Highlights ► Lytic bacteriophage and PBP 2a specific antibody were used for specific detection of MRSA. ► Bacteria–phage interactions were analyzed with a quartz crystal microbalance (QCM). ► The lytic phages were transformed into phage spheroids by exposure to water– chloroform interface. ► Phage and phage spheroids can be used for screening of antibiotic

Aquaculture Journals Page: 291 of 331

Aquaculture Journals – Table of Contents

resistant bacteria. ► The future applications may include biosensors, bacteriophage therapy, and antimicrobial surfaces.

Evaluation and optimization of multiple fluorophore analysis of a Pseudomonas aeruginosa biofilm Original Research Article Pages 192-196 Fiona J. Baird, Marilyn P. Wadsworth, Jane E. Hill Show preview | PDF (652 K) | Related articles | Related reference work articles Highlights ► Five fluorophores on a biofilm specimen can be successfully unmixed. ► We examine spectral effects of different mounting media. ► Thorough examination of settings and controls are required for confocal images.

Novel 16S rRNA based PCR method targeting Deinococcus spp. and its application to assess the diversity of deinococcal populations in environmental samples Ruchi Chaturvedi, G. Archana Show preview | PDF (1395 K) | Related articles | Related reference work articles Graphical abstract

Highlights ► Development of a hemi-nested PCR method for the detection of the Deinococcus spp. ► Reliable method for the detection of Deinoocccus from environmental DNA samples. ► Method can be employed for the rapid screening of the deinococcal isolates. ► Study of Deinococcus diversity by DGGE fingerprinting.

A blue native polyacrylamide gel electrophoretic technology to probe the functional proteomics mediating nitrogen homeostasis in Pseudomonas fluorescens Sungwon Han, Christopher Auger, Varun P. Appanna, Joseph Lemire, Zachary Castonguay, Elchin Akbarov, Vasu D. Appanna Show preview | PDF (389 K) | Related articles | Related reference work articles Highlights ► Blue native polyacrylamide gel electrophoresis is utilized to separate proteins. ► Glutamate and ammonia-generating enzymes can be monitored in cell-free extract. ► The activity band can be excised for further studies such as HPLC and 2D SDS-PAGE. ► This method provides an effective tool to monitor nitrogen homeostasis in microbial systems.

Aquaculture Journals Page: 292 of 331

Aquaculture Journals – Table of Contents

Use of a blocking primer allows selective amplification of bacterial DNA from microalgae cultures Shane M. Powell, Christopher C. Chapman, Michel Bermudes, Mark L. Tamplin Show preview | PDF (295 K) | Related articles | Related reference work articles Highlights ► A blocking primer to suppress PCR amplification of algal chloroplasts is described. ► Clone library data validating the effectiveness of the approach is presented. ► Useful method for analysing bacteria communities in microalagal cultures

Impact of normalization method on experimental outcome using RT-qPCR in Staphylococcus aureus Lukas Valihrach, Katerina Demnerova Show preview | PDF (262 K) | Supplementary content | Related articles | Related reference work articles Highlights ► A gene expression study using RT-qPCR was performed. ► The influence of normalization method on experimental outcome was investigated. ► Geometric mean of reference genes hu, pta, tpi proved to be the best normalization strategy. ► 16S rRNA gene was proved to be a poor reference gene. ► gyrB gene was found to be overestimated as a stable expressed reference gene.

Evaluation of RapidChek Select for the screening of Salmonella in meat and meat products Emrah Torlak, İbrahim Mustafa Akan, Mustafa İnal Show preview | PDF (149 K) | Related articles | Related reference work articles Highlights ► The efficacy of RapidChek Select for the screening of Salmonella was evaluated. ► Naturally and artificially contaminated meat and meat products were used. ► The evaluation was performed by comparison with the ISO reference culture-based method. ► The percentage of agreement between the results of two methods was determined. ► Results showed that the RapidChek Select is an efficient alternative method.

Selection of reference genes for real-time expression studies in Streptococcus agalactiae C. Florindo, R. Ferreira, V. Borges, B. Spellerberg, J.P. Gomes, M.J. Borrego Show preview | PDF (1013 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The stability of 10 reference genes was evaluated under different conditions. ► The candidate reference genes displayed different expression profiles. ► Gene expression stability was dependent on the strain, growth phase and conditions. ► geNorm and NormFinder results were consistent with those obtained experimentally.

Rapid detection and antimicrobial resistance gene profiling of Yersinia pestis using pyrosequencing technology Kingsley K. Amoako, Matthew C. Thomas, Fanliang Kong, Timothy W. Janzen, Kristen R. Hahn, Michael J. Shields, Noriko Goji Show preview | PDF (721 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 293 of 331

Aquaculture Journals – Table of Contents

Improving oligonucleotide fingerprinting of rRNA genes by implementation of polony microarray technology Paul M. Ruegger, Elizabeth Bent, Wei Li, Daniel R. Jeske, Xinping Cui, Jonathan Braun, Tao Jiang, James Borneman Show preview | PDF (397 K) | Related articles | Related reference work articles Highlights ► Polony OFRG distinguished 16S bacterial rRNA genes at or near the species level. ► Weighted UniFrac on polony OFRG data differentiates whole microbial communities. ► PCR artifacts are reduced via spatial isolation of genomic DNA prior to amplification.

High-resolution melt PCR analysis for rapid identification of Chlamydia abortus live vaccine strain 1B among C. abortus strains and field isolates Fabien Vorimore, Noémie Cavanna, Nadia Vicari, Simone Magnino, Hermann Willems, Annie Rodolakis, Victoria I. Siarkou, Karine Laroucau Show preview | PDF (532 K) | Related articles | Related reference work articles

Characterization of an intracellular ATP assay for evaluating the viability of live attenuated mycobacterial vaccine preparations Kristopher Kolibab, Steven C. Derrick, William R. Jacobs, Sheldon L. Morris Show preview | PDF (311 K) | Related articles | Related reference work articles Highlights ► Developed a modified ATP assay to rapidly measure the potency of live BCG vaccines. ► Showed a significant correlation between ATP content and viability of all vaccines. ► Modified ATP assay detected decreases in viability in stressed vaccine preparations.

Plasmid integration method: a new tool for analysis of the essentiality and function of genes in S. aureus Shinichiro Yamachika, Yoshikuni Onodera, Keiichi Hiramatsu, Hiroyuki Takase Show preview | PDF (447 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We verify and make use of the experimental system for analyzing the essentiality and function of genes. ► This method can distinguish between known essential genes, gyrA and mvaD, and non-essential genes, sigB and hla. ► 28 essential genes are identified from 116 S. aureus conserved hypothetical protein genes. ► The functional redundancy between the S. aureus gene (SA0865) and its ortholog human gene, the NAD kinase gene, is confirmed by this method.

Development and characterization of a Pseudomonas aeruginosa in vitro coupled transcription–translation assay system for evaluation of translation inhibitors Corey Fyfe, Joyce A. Sutcliffe, Trudy H. Grossman Show preview | PDF (650 K) | Related articles | Related reference work articles Highlights ► We describe a P. aeruginosa in vitro coupled transcription–translation system. ► P. aeruginosa and E. coli assays showed similar IC50s for translation inhibitors. ► P. aeruginosa and E. coli efflux limited cell activity of translation inhibitors. ► This assay is expected to be of use for developing new drugs for P. aeruginosa.

Aquaculture Journals Page: 294 of 331

Aquaculture Journals – Table of Contents

Quantitative study of viable Vibrio parahaemolyticus cells in raw seafood using propidium monoazide in combination with quantitative PCR Ru-Gang Zhu, Tuo-Ping Li, You-Feng Jia, Li-Feng Song Show preview | PDF (288 K) | Related articles | Related reference work articles Highlights ► Detection sensitivity is 12 CFU/reaction in artificial contamination oyster samples for both qPCR and PMA-qPCR. ► The optimum concentration of PMA is 8 μg mL− 1. ► The efficiency of PMA treatment is decreased greatly and even resulted in the inefficiency of PMA treatment with higher turbidity (> 10 NTU) and cell density of samples (OD600 nm ≥ 0.8). ► For seafood samples, the values obtained by PMA-qPCR are in better agreement with the numbers determined by culture isolation.

Ultrafiltration improves ELISA and Endopep MS analysis of botulinum neurotoxin type A in drinking water Brian H. Raphael, Matthew Lautenschlager, Amy Kahler, Suresh Pai, Bryan A. Parks, Suzanne R. Kalb, Susan E. Maslanka, Sanjiv Shah, Matthew Magnuson, Vincent R. Hill Show preview | PDF (363 K) | Related articles | Related reference work articles Highlights ► ELISA and MS methods were adapted for quantification of botulinum toxin type A in water. ► Toxin in highly dilute water samples was concentrated using ultrafiltration. ► Recovered toxin was stable up to 4 weeks at 4 °C. ► Various water quality parameters are correlated with toxin recovery.

Development of a risk-based methodology for estimating survival and growth of enteropathogenic Escherichia coli on iceberg-lettuce exposed at short-term storage in foodservice centers M.Y. Rodríguez-Caturla, A. Valero, R.M. García-Gimeno, G. Zurera Show preview | PDF (528 K) | Related articles | Related reference work articles Highlights ► Survival and growth of E. coli O158:H23 was studied in ready-to-eat iceberg lettuce. ► A significant increase of E. coli population was observed at temperatures above 16 °C. ► A risk-based approach was implemented to account for variability in growth potential of E. coli. ► Low contamination levels of E. coli in iceberg-lettuce increased the percentage of no growth cases. ► Predictive modeling can help to set t/T requirements in foodservice centers during storage, processing and distribution.

Detection of Bacillus anthracis from spores and cells by loop-mediated isothermal amplification without sample preparation Lawrence Dugan, Jane Bearinger, Aubree Hinckley, Cheryl Strout, Brian Souza Show preview | PDF (587 K) | Related articles | Related reference work articles

Highly discriminatory typing method for Listeria monocytogenes using polymorphic tandem repeat regions Satoko Miya, Hajime Takahashi, Chikako Kamimura, Miku Nakagawa, Takashi Kuda, Bon Kimura Show preview | PDF (295 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 295 of 331

Aquaculture Journals – Table of Contents

► A new typing method for Listeria monocytogenes was developed. ► The new method, MLTSA, used sequence polymorphism in 3 tandem repeat regions. ► The dendrogram obtained by MLTSA clustered lineages I and II separately. ► The MLTSA had a higher discriminatory power than virulence-gene-based MLST.

Establishment of loop-mediated isothermal amplification (LAMP) for rapid detection of Brucella spp. and application to milk and blood samples Liuyan Song, Juntao Li, Shuiping Hou, Xunde Li, Shouyi Chen Show preview | PDF (649 K) | Related articles | Related reference work articles Highlights ► LAMP primers were designed and reactions were optimized for detection of Brucella abortus. ► The LAMP method is specific and feasible for detection of four species of Brucella. ► The LAMP was applied to and successful for detection of Brucella spp. from raw milk and sheep blood.

Use of ESAT-6-CFP-10 fusion protein in the bovine interferon-gamma ELISPOT assay for diagnosis of Mycobacterium bovis infection in cattle Sugumar Parthasarathy, Maroudam Veerasami, Gangadharrao Appana, Dev Chandran, Dipankar Das, Villuppanoor Alwar Srinivasan Show preview | PDF (636 K) | Related articles | Related reference work articles Highlights ► Mycobacterium (TB) protein ESAT-6 and CFP-10 is cloned as a fusion ESAT-6-CFP-10 protein and purified from E. coli. ► Fusion protein has been evaluated in IFN-gamma ELISPOT assay. ► Fusion protein can replace ESAT-6, CFP-10 or a combination of both in ELISPOT assay for BTB diagnosis.

Development of a multiplex PCR assay for rapid identification of Burkholderia pseudomallei, Burkholderia thailandensis, Burkholderia mallei and Burkholderia cepacia complex Seng Fook Koh, Sun Tee Tay, Rasana Sermswan, Surasakdi Wongratanacheewin, Kek Heng Chua, Savithri D. Puthucheary Show preview | PDF (414 K) | Supplementary content | Related articles | Related reference work articles Highlights ► A multiplex PCR to identify and differentiate burkholderial species was developed. ► Primers were designed based on hypothetical genes of B. pseudomallei. ► This PCR assay is cost-effective, rapid and easy to interpret. ► This assay is valuable for use in clinical and veterinary laboratories.

Detection and validation of a small broad-host-range plasmid pBBR1MCS-2 for use in genetic manipulation of the extremely acidophilic Acidithiobacillus sp. Likai Hao, Xiangmei Liu, Huiyan Wang, Jianqun Lin, Xin Pang, Jianqiang Lin Show preview | PDF (517 K) | Related articles | Related reference work articles

Development of species-, strain- and antibiotic biosynthesis-specific quantitative PCR assays for Pantoea agglomerans as tools for biocontrol monitoring Andrea Braun-Kiewnick, Andreas Lehmann, Fabio Rezzonico, Chris Wend, Theo H.M. Smits, Brion Duffy Show preview | PDF (250 K) | Supplementary content | Related articles | Related reference work articles

Aquaculture Journals Page: 296 of 331

Aquaculture Journals – Table of Contents

Highlights ► Primer-probe sets for species-level detection of P. agglomerans were designed. ► Primer-probe sets for strain-level detection of P. agglomerans E325 were designed. ► Primer-probe sets for detection of pantocin A producers were designed. ► The qPCR assays developed were highly specific, efficient and sensitive. ► First orchards tests show the presence of low populations of the targets.

Comparison of conventional PCR, quantitative PCR, bacteriological culture and the Warthin Starry technique to detect Leptospira spp. in kidney and liver samples from naturally infected sheep from Brazil Felipe Fornazari, Rodrigo Costa da Silva, Virginia Bodelão Richini-Pereira, Hugo Enrique Orsini Beserra, Maria Cecília Rui Luvizotto, Helio Langoni Show preview | PDF (379 K) | Related articles | Related reference work articles Highlights ► We compared different techniques to detect Leptospira spp. in kidney and liver samples from naturally infected sheep. ► The Sejroe serogroup was the most prevalent. ► Molecular tests revealed better performance than traditional ones. ► The real time PCR was the most sensitive test. ► Kidney samples presented higher positivity than liver samples.

Mass spectrometry‐based chemotaxonomic classification of Penicillium species (P. echinulatum, P. expansum, P. solitum, and P. oxalicum) and its correlation with antioxidant activity Hyang Yeon Kim, Hye Min Park, Choong Hwan Lee Show preview | PDF (1062 K) | Related articles | Related reference work articles Highlights ► This study focuses on metabolomics approach for plant-derived Penicillium species. ► We examine the chemotaxonomy and antioxidant activity of extracts. ► We identify metabolites as biomarkers for distinguishing Penicillium species. ► We reveal the species- specific bioactivity of Penicillium.

Ribo HRM — Detection of inter- and intra-species polymorphisms within ribosomal DNA by high resolution melting analysis supported by application of artificial allelic standards Aleksander Masny, Agata Jagiełło, Grażyna Płucienniczak, Elzbieta Golab Show preview | PDF (940 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Ribo HRM allowed efficient differentiation of Trichinella populations. ► Novel microsatellite was detected within rDNA expansion segment 5 of Trichinella spp. ► Artificial, cloned allelic standards can be used for genotype identification in HRM PCR. ► Artificial allelic standards help to establish allelic complexity of a DNA sample.

Analysis of 16S–23S rRNA internal transcribed spacer regions in Pasteurellaceae isolated from laboratory rodents Laurentiu Benga, W. Peter M. Benten, Eva Engelhardt, Henrik Christensen, Martin Sager Show preview | PDF (1543 K) | Supplementary content | Related articles | Related reference work articles Highlights ► 16S rRNA diversity does not allow proper differentiation of mouse Pasteurellaceae. ► We analyze for the first time the ITS between 16S and 23S rRNAs as differentiation basis.

Aquaculture Journals Page: 297 of 331

Aquaculture Journals – Table of Contents

► The ITS number and length polymorphisms allow differentiation within this taxon. ► Two types of ITS sequences (ITSile + ala and ITSglu) were revealed. ► Sequence regions appropriate for specific identification of these bacteria are available.

Previous – Top – Next

VOLUME 91, PART 1, OCTOBER 2012 Website

Research articles

This issue is In Progress but contains articles that are final and fully citable. For recently accepted articles, see Articles in Press.

Identification and validation of reference genes to study the gene expression in Gluconacetobacter diazotrophicus grown in different carbon sources using RT- qPCR Péricles S. Galisa, Helder A.P. da Silva, Aline V.M. Macedo, Verônica M. Reis, Márcia S. Vidal, José I. Baldani, Jean L. Simões-Araújo Show preview | PDF (1018 K) | Related articles | Related reference work articles Highlights ► rpoC and dnaG were highly unstable in bacteria cultivated in medium with different carbon sources. ► rho, rpoD and 23SrRNA were the best reference genes to study bacteria gene expression. ► 23SrRNA was highly expressed and should be used with care to avoid the target gene expression error.

Assessment of Candida shehatae viability by flow cytometry and fluorescent probes Julie Monthéard, Sandy Garcier, Eric Lombard, Xavier Cameleyre, Stéphane Guillouet, Carole Molina-Jouve, Sandrine Alfenore Show preview | PDF (562 K) | Related articles | Related reference work articles

Development of a primer system to study abundance and diversity of the gene coding for alanine aminopeptidase pepN gene in Gram-negative soil bacteria Esther Enowashu, Ellen Kandeler, Michael Schloter, Frank Rasche, Marion Engel Show preview | PDF (1389 K) | Related articles | Related reference work articles Highlights ► Primers for Gram-negative bacteria harboring alanine aminopeptidase (pepN) were developed. ► Diversity of pepN in soil is closely linked to potential transformation rates of alanine. ► Climate change influences diversity of pepN in different soils.

BAPJ69-4A: A yeast two-hybrid strain for both positive and negative genetic selection Hally Anne Shaffer, Michael Kenneth Rood, Badar Kashlan, Eileen I-ling Chang, Donald Francis Doyle, Bahareh Azizi Show preview | PDF (896 K) | Related articles | Related reference work articles Highlights ► We describe the creation of a novel yeast two-hybrid strain, BAPJ69-4A. ► BAPJ69-4A contains four markers: ADE2, HIS3, URA3, and lacZ. ► The addition of the URA3 marker Aquaculture Journals Page: 298 of 331

Aquaculture Journals – Table of Contents

allows for both positive and negative selection. ► The differences in marker stringency allow for highly tunable assay sensitivity. ► BAPJ69-4A was characterized using the retinoid X receptor and variants.

Species-specificity of DNA trimer densities in chromosomes and their use in the classification of closely related organisms Thi Huyen Phan, Duc Luong Nguyen Show preview | PDF (2184 K) | Related articles | Related reference work articles

Improved real-time PCR estimation of gene copy number in soil extracts using an artificial reference T.J. Daniell, J. Davidson, C.J. Alexander, S. Caul, D.M. Roberts Show preview | PDF (328 K) | Supplementary content | Related articles | Related reference work articles Highlights ► Genecopy number estimates are significantly improved using a relative method. ► Relative estimation highlights low estimates of gene copy number inherent with absolute methods. ► Use of an artificial spike avoids interference with target amplicons. ► Control for inhibition and/or extraction efficiency allows simple comparison between soil types.

Evaluation of different storage methods to characterize the fecal bacterial communities of captive western lowland gorillas (Gorilla gorilla gorilla) Klára Vlčková, Jakub Mrázek, Jan Kopečný, Klára J. Petrželková Show preview | PDF (640 K) | Supplementary content | Related articles | Related reference work articles Highlights ► We compared freezing, RNAlater and ethanol for storage of fecal bacterial DNA. ► By PCR-DGGE and qPCR we assessed and compared fecal microbiota of captive gorillas. ► We recommend using RNAlater to preserve fecal samples, if freezing is not possible. ► Firmicutes were the most frequently identified species in gorilla fecal community.

Synthesis of O-serogroup specific positive controls and real-time PCR standards for nine clinically relevant non-O157 STECs Cheyenne C. Conrad, Brandon H. Gilroyed, Tim A. McAllister, Tim Reuter Show preview | PDF (650 K) | Related articles | Related reference work articles Highlights ► Controls from pathogens to evaluate the reliability of PCR assays may be difficult to obtain. ► We designed stacked synthetic real-time PCR standards to monitor clinically relevant STEC. ► We demonstrated advantages utilizing synthetic controls by (real-time) PCR assays. ► Synthetic controls were validated using DNA from native non-O157 STEC strains.

A new and efficient method to obtain benzalkonium chloride adapted cells of Listeria monocytogenes Paula Saá Ibusquiza, Juan J.R. Herrera, Daniel Vázquez-Sánchez, Adelaida Parada, Marta L. Cabo Show preview | PDF (183 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The proposed new method to obtain BAC adapted cells is more effective and less time- consuming. ► A maximum adaptation level was demonstrated in all L. monocytogenes

Aquaculture Journals Page: 299 of 331

Aquaculture Journals – Table of Contents

assayed. ► The maximum level of adaptation could contribute to assure control of L. monocytogenes.

Improved protocol for the extraction of bacterial mRNA from soils Shilpi Sharma, Ravikumar Mehta, Rashi Gupta, Michael Schloter Show preview | PDF (284 K) | Related articles | Related reference work articles Highlights ► A new protocol for extraction of mRNA from soils was developed. ► Quality of mRNA obtained was sufficient for molecular analysis. ► Based on RT qPCR data yields were 7 times higher compared to so far published protocols.

Comparison of two DNA sequence-based typing schemes for the Fusarium solani Species Complex and proposal of a new consensus method Anne Debourgogne, Cécile Gueidan, Sybren de Hoog, Alain Lozniewski, Marie Machouart Show preview | PDF (453 K) | Supplementary content | Related articles | Related reference work articles Highlights ► The three and five locus MLST schemes were compared and both schemes are efficient. ► The consensus method is more discriminating than either of individual schemes. ► With eight loci, this scheme offers a high discriminatory power.

Development of a novel fluorescent microbead-based immunoassay and comparison with three enzyme-linked immunoassays for detection of anti- Erysipelothrix spp. IgG antibodies in pigs with known and unknown exposure L.G. Giménez-Lirola, C.T. Xiao, P.G. Halbur, T. Opriessnig Show preview | PDF (511 K) | Related articles | Related reference work articles Highlights ► An Erysipelothrix spp. fluorescent microbead-based immunoassay (FMIA) based on the SpaA protein was developed. ► The FMIA was found to be specific and sensitive on sera from experimentally-exposed pigs. ► The results were comparable with those from an ELISA based on the same SpaA protein. ► The sensitivity of the FMIA was higher when compared to two commercially available ELISAs.

Microbial 16S rRNA Ion Tag and community metagenome sequencing using the Ion Torrent (PGM) Platform Andrew S. Whiteley, Sasha Jenkins, Ian Waite, Nina Kresoje, Hugh Payne, Bruce Mullan, Richard Allcock, Anthony O'Donnell Show preview | PDF (976 K) | Related articles | Related reference work articles Highlights ► ‘Post light’ DNA sequencer producing analyses in 8 hours with low reagent costs ► Scalable chip based sequencing ranging from 100,000 to 1,000,000 + reads ► Multiplex 16S rRNA analyses developed and demonstrated in anaerobic digesters. ► Novel covered anaerobic ponds dominated by Bacteroidia, Synergistia and Clostridia.

Methanogenic activity tests by Infrared Tunable Diode Laser Absorption Spectroscopy Karla Martinez-Cruz, Armando Sepulveda-Jauregui, Nayeli Escobar-Orozco, Frederic Thalasso Show preview | PDF (414 K) | Related articles | Related reference work articles

Aquaculture Journals Page: 300 of 331

Aquaculture Journals – Table of Contents

Highlights ► We developed a new method to measure methane concentration in closed vials. ► This method was based on Tuneable Diode Laser Spectroscopy. ► The method was used successfully to determine methanogenic activity. ► The method is of interest in wastewater treatment and microbial ecology studies.

Use of the fluorescent probe LAURDAN to label and measure inner membrane fluidity of endospores of Clostridium spp. Simmon Hofstetter, Christian Denter, Roland Winter, Lynn M. McMullen, Michael G. Gänzle Show preview | PDF (501 K) | Related articles | Related reference work articles Highlights ► A method for measuring membrane fluidity of endospores was developed. ► The fluorescence method can be applied to endospore populations in solution. ► Outer membranes of endospores do not significantly interfere with this method. ► We report that the inner membranes of endospores are highly ordered.

Endocytosis in Trypanosoma cruzi (Euglenozoa: Kinetoplastea) epimastigotes: Visualization of ingested transferrin–gold nanoparticle complexes by confocal laser microscopy Iriane Eger, Maurilio José Soares Show preview | PDF (656 K) | Related articles | Related reference work articles Highlights ► Gold nanoparticles coupled to transferrin could be imaged by confocal microscopy. ► The gold biomarker accumulated in endocytic organelles of Trypanosoma cruzi. ► Intracellular gold labeling was evident at the cytopharynx and the reservosomes. ► Intracellular gold clusters could be seen by reflection or photoluminescence modes.

Environmental microbiology through the lens of high-throughput DNA sequencing: Synopsis of current platforms and bioinformatics approaches Ramiro Logares, Thomas H.A. Haverkamp, Surendra Kumar, Anders Lanzén, Alexander J. Nederbragt, Christopher Quince, Håvard Kauserud Show preview | PDF (250 K) | Related articles | Related reference work articles Highlights ► High Throughput Sequencing (HTS) is revolutionizing environmental microbiology. ► HTS developments advance in concert with bioinformatics. ► A more comprehensive view of the microbial world will likely emerge thanks to HTS.

Development of an immunochromatographic assay for rapid detection of AAC(6′)-Ib-producing Pseudomonas aeruginosa Tatsuya Tada, Tohru Miyoshi-Akiyama, Masashi Tanaka, Kenji Narahara, Masahiro Shimojima, Tomoe Kitao, Kayo Shimada, Teruo Kirikae Show preview | PDF (293 K) | Related articles | Related reference work articles Highlights ► We prepared novel mAbs that bind to AAC(6')-Ib aminoglycoside acetyl . ► We designed the immunochromatographic assay using the mAbs. ► The assay exactly identified the AAC(6')-Ib production in P. aerugionosa. ► The assay is more rapid molecular-based diagnostic method compared with PCR analysis.

Aquaculture Journals Page: 301 of 331

Aquaculture Journals – Table of Contents

Optimization of the URA-blaster disruption system in Candida guilliermondii: Efficient gene targeting using the URA3 marker Emilien Foureau, Vincent Courdavault, Andrew J. Simkin, Olivier Pichon, Joël Crèche, Nathalie Giglioli-Guivarc'h, Marc Clastre, Nicolas Papon Show preview | PDF (563 K) | Related articles | Related reference work articles Highlights ► A simple transformation system for C. guilliermondii was established. ► An ATCC 6260- derived uracil auxotroph strain and a URA3 blaster cassette were developed. ► This strategy allows efficient multiple gene disruption by homologous recombination.

Development of a novel plasmid as a shuttle vector for heterologous gene expression in Mycoplasma yeatsii Bethany N. Kent, Mark F. Foecking, Michael J. Calcutt Show preview | PDF (542 K) | Related articles | Related reference work articles Highlights ► A novel plasmid, pMyBK1, has been identified in Mycoplasma yeatsii Type strain GIH. ► pMyBK1-based shuttle vectors transform M. yeatsii at high efficiency. ► Heterologous protein expression has been demonstrated for MALP-404. ► ORF2, dissimilar to known plasmid-encoded proteins, is essential for replication.

A modified acid-fast staining method for rapid detection of Mycobacterium tuberculosis Dan Zhao, Xiao-Meng Yang, Qian-Yu Chen, Xing-Shu Zhang, Chun-Jiang Guo, Xiao-Yan Che Show preview | PDF (537 K) | Related articles | Related reference work articles Highlights ► Modified IK acid-fast staining or ZN acid-fast staining method is time consuming. ► A new, modified staining method is described. ► In which carbol fuchsin and dioxogen are added to the slide. ► The method resulted in shortened processing time and eliminated need for heating. ► The method for detection of M. tuberculosis was sensitive, reliable, and rapid.

Gene transfection of Toxoplasma gondii using PEI/DNA polyplexes Nasrin Salehi, Ching-An Peng Show preview | PDF (611 K) | Related articles | Related reference work articles Highlights ► PEI/DNA polyplex is capable of transfecting GFP gene to Toxoplasma gondii. ► GFP- expressing tachyzoites and bradyzoites are observed in infected HFF cells. ► Effective and inexpensive reagent to ferry GFP-encoded plasmids into T. gondii. ► Potential tool for studying parasite interconversion stages and drug screening.

Development of an amperometric immunosensor for detection of staphylococcal enterotoxin type A in cheese Maria Gardenny Ribeiro Pimenta-Martins, Roselayne Ferro Furtado, Luiz Guilherme Dias Heneine, Ricardo Souza Dias, Maria de Fátima Borges, Carlucio Roberto Alves Show preview | PDF (941 K) | Related articles | Related reference work articles Highlights

Aquaculture Journals Page: 302 of 331

Aquaculture Journals – Table of Contents

► A novel amperometric immunosensor for detection of staphylococcal enterotoxin A in cheese was successfully constructed. ► A platform of cysteamine-protein A- anti-SEA was selected for the development of the immunosensor. ► The proposed immunosensor gave comparable results to commercial kit for detection of staphylococcal enterotoxin A.

Previous – Top – Next

Aquaculture Journals Page: 303 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff SSShhheeellllllfffiiissshhh RRReeessseeeaaarrrccchhh

VOLUME 29, PART 4, DECEMBER 2010 Website

No new issue available

Previous – Top – Next

Aquaculture Journals Page: 304 of 331

Aquaculture Journals – Table of Contents

JJJooouuurrrnnnaaalll ooofff ttthhheee WWWooorrrlllddd AAAqqquuuaaacccuuullltttuuurrreee SSSoooccciiieeetttyyy

VOLUME 43, PART 3, JUNE 2012 Website

Research articles

An Overview of the Use of Fatty Acids in Fish Farming Research during the Last Decade, with Particular Emphasis on Fish Quality (pages 291–320) Nafsika Karakatsouli Abstract Full Article (HTML) PDF(640K) References

Red Porgy, Pagrus pagrus, Larvae Performance and Nutritional Condition in Response to Different Weaning Regimes (pages 321–334) Carlos A. P. Andrade, Francisco Nascimento, Luís E. C. Conceição, Fátima Linares, Marc Lacuisse and Maria T. Dinis Abstract Full Article (HTML) PDF(631K) References

Use of Diet Crossover to Determine the Effects of β-glucan Supplementation on Immunity and Growth of Nile Tilapia, Oreochromis niloticus (pages 335–348) Thomas L. Welker, Chhorn Lim, Mediha Yildirim-Aksoy and Phillip H. Klesius Abstract Full Article (HTML) PDF(521K) References

Effects of Major Water Quality Variables on Shrimp Production in Inland, Low- Salinity Ponds in Alabama (pages 349–361) Naparat Prapaiwong and Claude E. Boyd Abstract Full Article (HTML) PDF(765K) References

Supplementations of dl-Methionine and Methionine Dipeptide in Diets are Effective for the Development and Growth of Larvae and Juvenile Red Sea Bream, Pagrus major (pages 362–374) Roger Edward P. Mamauag, Jian Gao, Binh Thanh Nguyen, Janice A. Ragaza, Shunsuke Koshio, Manabu Ishikawa and Saichiro Yokoyama Abstract Full Article (HTML) PDF(508K) References

Effects of Cryopreservation on Morphology and Viability of Sperm and Larvae of Atlantic Cod, Gadus morhua L. (pages 375–386) Oddvar H. Ottesen, Vegard Marschhäuser and Igor Babiak Abstract Full Article (HTML) PDF(653K) References

Bioprospection of Microalgae and Cyanobacteria as Biocontrol Agents Against Vibrio campbellii and Their Use in White Shrimp Litopenaeus vannamei Culture (pages 387–399) Oscar González-Davis, Elizabeth Ponce-Rivas, M. Del Pilar Sánchez-Saavedra, María- Enriqueta Muñoz-Márquez and William H. Gerwick Abstract Full Article (HTML) PDF(638K) References

Effects of Dietary β-1,3-Glucan on Expression of Immune-related Genes of Litopenaeus vannamei Exposed to Nitrite-N (pages 400–410) Hong-Xia Zhao, Jun-Ming Cao, An-Li Wang, Yan-Hua Huang, Guo-Li Li and Han-Bing Lan Abstract Full Article (HTML) PDF(560K) References

The Scale-up of Spotted Rose Snapper, Lutjanus guttatus, Larval Rearing at Mazatlan, Mexico (pages 411–422)

Aquaculture Journals Page: 305 of 331

Aquaculture Journals – Table of Contents

L. Alvarez-Lajonchère, M. I. Abdo de la Parra, L. E. Rodríguez Ibarra, G. Velasco Blanco, A. C. Puello-Cruz, B. González Rodríguez, A. Ibarra-Soto and L. Ibarra Castro Abstract Full Article (HTML) PDF(748K) References

Effect of Salinity on Larval Rearing of Pacu, Piaractus mesopotamicus, a Freshwater Species (pages 423–432) Rosângela K. Jomori, Ronald K. Luz and Maria Célia Portella Abstract Full Article (HTML) PDF(524K) References

Oxygen Consumption Response to Gradual Hypoxia in Spider Crab, Maja brachydactyla: Critical and Lethal Oxygen Saturations and Recovery Ability (pages 433–441) Jesús Cerezo Valverde, Felipe Aguado-Giménez, María Dolores Hernández and Benjamín García García Abstract Full Article (HTML) PDF(602K) References

Isolation and Characterization of Microsatellite Markers From the Brown- marbled Grouper, Epinephelus fuscoguttatus (pages 442–446) Chuan Gao, Le Wang, Bin Fan, Sen Yang, Zining Meng and Haoran Lin Abstract Full Article (HTML) PDF(454K) References

Previous – Top – Next

VOLUME 43, PART 4, AUGUST 2012 Website

Research articles

Review of the Application of Garlic, Allium sativum, in Aquaculture (pages 447– 458) Jeong-Yeol Lee and Yang Gao Abstract Full Article (HTML) PDF(505K) References

Experimental Infection of Four Aquacultured Species with Viral Hemorrhagic Septicemia Virus Type IVb (pages 459–476) Geoffrey H. Groocock, Stephen A. Frattini, R. Cornwell, Laura L. Coffee, Gregory A. Wooster, Rodman G. Getchell and Paul R. Bowser Abstract Full Article (HTML) PDF(1698K) References

Modification in Body Fat Content and Fatty Acid Profile of Wild Yellow Shortfin Eel, Anguilla australis, through Short-term Fattening (pages 477–489) Jorge A. Hirt-Chabbert and Owen A. Young Abstract Full Article (HTML) PDF(595K) References

Effect of Varying Protein-to-Energy Ratios on Growth, Nutrient Retention, Somatic Indices, and Digestive Enzyme Activities of Singhi, Heteropneustes fossilis (Bloch) (pages 490–501) Mukhtar A. Khan and Shabi Fatma Abidi Abstract Full Article (HTML) PDF(513K) References

Economic Impact of Double-Crested Cormorant, Phalacrocorax auritus, Depredation on Channel Catfish, Ictalurus punctatus, Aquaculture in Mississippi, USA (pages 502–513) Brian S. Dorr, Loren W. Burger, Scott C. Barras and Kristina Casscles Godwin Abstract Full Article (HTML) PDF(590K) References

Aquaculture Journals Page: 306 of 331

Aquaculture Journals – Table of Contents

Seasonal Fouling Stress on the Farmed Pearl Oyster, Pinctada fucata, from Southeastern Arabian Sea (pages 514–525) Vasant Kripa, Kolliyil S. Mohamed and Tharammal S. Velayudhan Abstract Full Article (HTML) PDF(809K) References

Approximate Water and Chemical Budgets for an Experimental, In-pond Raceway System (pages 526–537) Travis W. Brown, Claude E. Boyd and Jesse A. Chappell Abstract Full Article (HTML) PDF(603K) References

Influence of Dietary Glycyrrhetinic Acid Combined with Different Levels of Lipid on Growth, Body Composition, and Cortisol of Juvenile Channel Catfish, Ictalurus punctatus (pages 538–547) Guang-zhen Jiang, Wen-bin Liu, Chun-nuan Zhang, Wei-wei Zhang and Ying Wang Abstract Full Article (HTML) PDF(496K) References

Evaluation of Toxicity of Dietary Chelated Copper in Juvenile Olive Flounder, Paralichthys olivaceus, Based on Growth and Tissue Copper Concentration (pages 548–559) Mahmoud Mohseni, Gun-Hyun Park, Jun-Ho Lee, Okorie Eme Okorie, Craig Browdy, Anant Bharadwaj and Sungchal C. Bai Abstract Full Article (HTML) PDF(532K) References

The Use of Farmed Salmon Oil to Replace Anchovy Oil in Diet of Turbot, Psetta maxima, Reared in Brackish Water (pages 560–570) Hüseyin Sevgili , Adem Kurtoğlu, Masahiko Oikawa, Ahmet Mefut and Rizvan Süyek Abstract Full Article (HTML) PDF(611K) References

Quantitative and Qualitative Aspects of Bacterial Communities Associated with Cultures of Chlorella minutissima (pages 571–578) Pavlos Makridis, Tania Ferreira, Fotini Kokou, Costas S. Tsigenopoulos and Pascal Divanach Abstract Full Article (HTML) PDF(629K) References

Effects of Hyperoxic Conditions on Growth Performance in Juvenile and Adult Green Sea Urchin, Strongylocentrotus droebachiensis (pages 579–584) Sten Ivar Siikavuopio Abstract Full Article (HTML) PDF(525K) References

The Influence of Ovarian Fluid pH of Stripped Unfertilized Channel Catfish, Ictalurus punctatus, Eggs on the Hatching Success of Channel Catfish ♀ x Blue Catfish, Ictalurus furcatus♂, Hybrid Catfish Eggs (pages 585–593) Nagaraj G. Chatakondi and Eugene L. Torrans Abstract Full Article (HTML) PDF(533K) References

Previous – Top – Next

Aquaculture Journals Page: 307 of 331

Aquaculture Journals – Table of Contents

LLLeeetttttteeerrrsss iiinnn AAAppppppllliiieeeddd MMMiiicccrrrooobbbiiiooolllooogggyyy

VOLUME 55, PART 1, JULY 2012 Website

Research articles

Original Articles

Diversity and antibacterial activity of bacteria isolated from the coastal marine sponges Amphilectus fucorum and Eurypon major (pages 2–8) L.M. Margassery, J. Kennedy, F. O’Gara, A.D. Dobson and J.P. Morrissey Abstract Full Article (HTML) PDF(504K) References Supporting Information

Study on the electro-transformation conditions of improving transformation efficiency for Bacillus subtilis (pages 9–14) Y.-P. Lu, C. Zhang, F.X. Lv, X.M. Bie and Z.-X. Lu Abstract Full Article (HTML) PDF(234K) References

Mesorhizobium ciceri LMS-1 expressing an exogenous 1-aminocyclopropane-1- carboxylate (ACC) deaminase increases its nodulation abilities and chickpea plant resistance to soil constraints (pages 15–21) F.X. Nascimento, C. Brígido, B.R. Glick, S. Oliveira and L. Alho Abstract Full Article (HTML) PDF(270K) References

Discrepancies in identification of Vibrio cholerae strains as members of Aeromonadaceae and Enterobacteriaceae by automated microbial identification system (pages 22–26) A. Saini, H. Kaur, S. Purwar, S. D. Kholkute and S. Roy Abstract Full Article (HTML) PDF(180K) References

Molecular diversity of CTX prophage in Vibrio cholerae (pages 27–32) N.H. Aliabad, B. Bakhshi, M.R. Pourshafie, A. Sharifnia and M. Ghorbani Abstract Full Article (HTML) PDF(169K) References

Engineering Streptomyces tenebrarius to synthesize single component of carbamoyl tobramycin (pages 33–39) W. Hong and S. Yan Abstract Full Article (HTML) PDF(257K) References

Evaluation of sample preparation methods for MALDI-TOF MS identification of highly dangerous bacteria (pages 40–46) M. Drevinek, J. Dresler, J. Klimentova, L. Pisa and M. Hubalek Abstract Full Article (HTML) PDF(275K) References Supporting Information

Antimicrobial activities of therapeutic herbal plants against Listeria monocytogenes and the herbal plant cytotoxicity on Caco-2 cell (pages 47–55) Y. Yoon and K-H. Choi Abstract Full Article (HTML) PDF(377K) References

Genotype-dependent sulphite tolerance of Australian Dekkera (Brettanomyces) bruxellensis wine isolates (pages 56–61) C. Curtin, E. Kennedy and P.A. Henschke Abstract Full Article (HTML) PDF(199K) References

Aquaculture Journals Page: 308 of 331

Aquaculture Journals – Table of Contents

Bromelain, a cysteine protease from pineapple (Ananas comosus) stem, is an inhibitor of fungal plant pathogens (pages 62–67) B. López-García, M. Hernández and B.S. Segundo Abstract Full Article (HTML) PDF(306K) References

A new approach to isolating siderophore-producing actinobacteria (pages 68– 72) I. Nakouti, P. Sihanonth and G. Hobbs Abstract Full Article (HTML) PDF(164K) References

Investigation of the roles of T6SS genes in motility, biofilm formation, and extracellular protease Asp production in Vibrio alginolyticus with modified Gateway-compatible plasmids (pages 73–81) H. Liu, D. Gu, L. Sheng, Q. Wang and Y. Zhang Abstract Full Article (HTML) PDF(322K) References

Development of a simple and high-throughput method for detecting aflatoxins production in culture media (pages 82–89) F. Degola, C. Dall’Asta and F.M. Restivo Abstract Full Article (HTML) PDF(344K) References Supporting Information

Previous – Top – Next

VOLUME 55, PART 2, AUGUST 2012 Website

Research articles

Identification of qseEGF genetic locus and its roles in controlling hemolytic activity and invasion in fish pathogen Edwardsiella tarda (pages 91–98) Jingfan Xiao, Tao Chen, Minjun Yang, Yuanxing Zhang and Qiyao Wang Abstract Full Article (HTML) PDF(856K) References

Use of the rpoB gene as an alternative to the V3 gene for the identification of spoilage and pathogenic bacteria species in milk and milk products (pages 99– 108) V. Deperrois-Lafarge and T. Meheut Abstract Full Article (HTML) PDF(242K) References

Comparison of bacterial communities in faeces of beef cattle fed diets containing corn and wet distillers’ grain with solubles (pages 109–114) L.M. Durso, J.E. Wells, G.P. Harhay, W.C. Rice, L. Kuehn, J.L. Bono, S. Shackelford, T. Wheeler and T.P.L. Smith Abstract Full Article (HTML) PDF(155K) References Supporting Information

Construction of a fusion flagellin complex and evaluation of the protective immunity of it in red snapper (Lutjanus sanguineus) (pages 115–121) H.Y. Liang, Z.H. Wu, J.C. Jian and Z.H. Liu Abstract Full Article (HTML) PDF(400K) References

First outbreak of food poisoning caused by Salmonella enterica subspecies enterica serovar Berta in Italy (pages 122–127) E. Di Giannatale, L. Sacchini, T. Persiani, A. Alessiani, F. Marotta and K. Zilli Abstract Full Article (HTML) PDF(252K) References

Aquaculture Journals Page: 309 of 331

Aquaculture Journals – Table of Contents

The role of nisin in fuel ethanol production with Saccharomyces cerevisiae (pages 128–134) J. Peng, L. Zhang, Z.-H. Gu, Z.-Y. Ding and G.-Y. Shi Abstract Full Article (HTML) PDF(346K) References

Oral administration of milk fermented with Lactococcus lactis subsp. cremoris FC protects mice against influenza virus infection (pages 135–140) T. Maruo, Y. Gotoh, H. Nishimura, S. Ohashi, T. Toda and K. Takahashi Abstract Full Article (HTML) PDF(490K) References

Production of the antimicrobial peptides Caseicin A and B by Bacillus isolates growing on sodium caseinate (pages 141–148) R.M. Kent, C.M. Guinane, P.M. O’Connor, G.F. Fitzgerald, C. Hill, C. Stanton and R.P. Ross Abstract Full Article (HTML) PDF(256K) References

Selective production of acetone during continuous synthesis gas fermentation by engineered biocatalyst Clostridium sp. MAceT113 (pages 149–154) V. Berzin, M. Kiriukhin and M. Tyurin Abstract Full Article (HTML) PDF(318K) References

Antifungal activity of Moroccan medicinal plants against citrus sour rot agent Geotrichum candidum (pages 155–161) I. Talibi, L. Askarne, H. Boubaker, E.H. Boudyach, F. Msanda, B. Saadi and A. Ait Ben Aoumar Abstract Full Article (HTML) PDF(197K) References

Draft genome sequence of Streptomyces coelicoflavus ZG0656 reveals the putative biosynthetic gene cluster of acarviostatin family α-amylase inhibitors (pages 162–169) X. Guo, P. Geng, F. Bai, G. Bai, T. Sun, X. Li, L. Shi and Q. Zhong Abstract Full Article (HTML) PDF(735K) References

Evaluation of indigenous bacterial strains for biocontrol of the frogeye leaf spot of soya bean caused by Cercospora sojina (pages 170–173) E. Simonetti, M.A. Carmona, M.M. Scandiani, A.F. García, A.G. Luque, O.S. Correa and K.B. Balestrasse Abstract Full Article (HTML) PDF(102K) References

Previous – Top – Next

VOLUME 55, PART 3, SEPTEMBER 2012 Website

Research articles

Characterization of three propane-inducible oxygenases in Mycobacterium sp. strain ENV421 (pages 175–181) H. Masuda, K. McClay, R.J. Steffan and G.J. Zylstra Abstract Full Article (HTML) PDF(186K) References

Using propidium monoazide to distinguish between viable and nonviable bacteria, MS2 and murine norovirus (pages 182–188) S.Y. Kim and G. Ko Abstract Full Article (HTML) PDF(807K) References

Aquaculture Journals Page: 310 of 331

Aquaculture Journals – Table of Contents

Survival and persistence of nonspore-forming biothreat agents in water (pages 189–194) S.E. Gilbert and L.J. Rose Abstract Full Article (HTML) PDF(453K) References

Increase in extracellular inulinase production for a new Rhizoctonia ssp. strain by using buckwheat (Fagopyrum esculentum) flour as a single carbon source (pages 195–201) C. Neagu Bonciu, O. Constantin and G. Bahrim Abstract Full Article (HTML) PDF(191K) References

Development and evaluation of loop-mediated isothermal amplification assay for rapid and sensitive detection of canine parvovirus DNA directly in faecal specimens (pages 202–209) H.K. Mukhopadhyay, S. Amsaveni, S.L. Matta, P.X. Antony, J. Thanislass and R.M. Pillai Abstract Full Article (HTML) PDF(292K) References Supporting Information

Effect of salinity on the bioremediation of petroleum hydrocarbons in a saline- alkaline soil (pages 210–217) X. Qin, J.C. Tang, D.S. Li and Q.M. Zhang Abstract Full Article (HTML) PDF(660K) References

Reduction of Bacillus cereus spores in sikhye, a traditional Korean rice beverage, by modified tyndallization processes with and without carbon dioxide injection (pages 218–223) H. Kim, H. Kim, J. Bang, Y. Kim, L.R. Beuchat and J.-H. Ryu Abstract Full Article (HTML) PDF(155K) References

Identity and virulence properties of Aeromonas isolates from diseased fish, healthy controls and water environment in China (pages 224–233) M. Hu, N. Wang, Z.H. Pan, C.P. Lu and Y.J. Liu Abstract Full Article (HTML) PDF(180K) References

Combination of N-methylisatin-β-thiosemicarbazone derivative (SCH16) with ribavirin and mycophenolic acid potentiates the antiviral activity of SCH16 against Japanese encephalitis virus in vitro (pages 234–239) L. Sebastian, A. Desai, P. Yogeeswari, D. Sriram, S.N. Madhusudana and V. Ravi Abstract Full Article (HTML) PDF(149K) References

Butanol production from corncob residue using Clostridium beijerinckii NCIMB 8052 (pages 240–246) W.L. Zhang, Z.Y. Liu, Z. Liu and F.L. Li Abstract Full Article (HTML) PDF(474K) References Supporting Information

Basic characterization and partial purification of β-glucosidase from cell-free extracts of Oenococcus oeni ST81 (pages 247–255) J.M. Mesas, M.C. Rodríguez and M.T. Alegre Abstract Full Article (HTML) PDF(250K) References Supporting Information

Development and evaluation of a new device to effectively detach micro- organisms from food samples (pages 256–262) Y.H. Kim, S.Y. Lee, H.G. Sagong, S. Heu, S. Ryu and D.H. Kang Abstract Full Article (HTML) PDF(351K)

Aquaculture Journals Page: 311 of 331

Aquaculture Journals – Table of Contents

Erratum

Erratum (page 263) Article first published online: 13 JUL 2012 | DOI: 10.1111/j.1472-765X.2012.03286.x This article corrects: Prevention of Staphylococcus aureus biofilm formation and reduction in established biofilm density using a combination of phage K and modified derivatives Abstract Full Article (HTML) PDF(95K) References

Previous – Top – Next

Aquaculture Journals Page: 312 of 331

Aquaculture Journals – Table of Contents

MMMaaarrriiinnneee BBBiiiooolllooogggyyy

VOLUME 159, PART 7, JULY 2012 Website

Research articles

Original Paper

Kelp as a trophic resource for marine suspension feeders: a review of isotope- based evidence Robert J. Miller and Henry M. Page Download PDF (333.6 KB) View HTML

Mating system of the burrowing crab Neohelice granulata (Brachyura: Varunidae) in two contrasting environments: effect of burrow architecture M. P. Sal Moyano, M. A. Gavio and T. A. Luppi Download PDF (865.1 KB) View HTML

Continuous growth facilitates feeding and reproduction: impact of size on energy allocation patterns for organisms with indeterminate growth Joshua P. Lord and Alan L. Shanks Download PDF (542.0 KB) View HTML Supplemental

Context-dependent effects of symbiosis: Zoanthidea colonization generally improves Demospongiae condition in native habitats Timothy D. Swain Download PDF (410.3 KB) View HTML

The effect of pulsed versus gradual salinity reduction on the physiology and survival of Halophila johnsonii Eiseman Nina E. Griffin and Michael J. Durako Download PDF (358.3 KB) View HTML

Nutrient starvation effects on the allelochemical potency of Alexandrium tamarense (Dinophyceae) Mingming Zhu and Urban Tillmann Download PDF (425.9 KB) View HTML

Photobiology of corals from Brazil’s near-shore marginal reefs of Abrolhos David J. Suggett, Ruy K. P. Kikuchi, Marília D. M. Oliveira, Saulo Spanó and Rafael Carvalho, et al. Download PDF (461.8 KB) View HTML

Comparing the ability of a non-indigenous and a native seaweed to induce anti- herbivory defenses Hee Young Yun and Markus Molis Download PDF (475.7 KB) View HTML

Characterization of the zooxanthellate and azooxanthellate morphotypes of the Mediterranean gorgonian Eunicella singularis Andrea Gori, Lorenzo Bramanti, Pablo López-González, Jana N. Thoma and Josep-Maria Gili, et al. Download PDF (914.9 KB) View HTML Supplemental

Aquaculture Journals Page: 313 of 331

Aquaculture Journals – Table of Contents

The effect of patch isolation on epifaunal colonization in two different seagrass ecosystems Camilla Gustafsson and Tiina Salo Download PDF (415.2 KB) View HTML

Population structure and connectivity of the European conger eel (Conger conger) across the north-eastern Atlantic and western Mediterranean: integrating molecular and otolith elemental approaches Alberto T. Correia, Ana A. Ramos, Filipe Barros, Gonçalo Silva and Paul Hamer, et al. Download PDF (643.1 KB) View HTML

Foraging grounds, movement patterns and habitat connectivity of juvenile loggerhead turtles (Caretta caretta) tracked from the Adriatic Sea Paolo Casale, Marco Affronte, Dino Scaravelli, Bojan Lazar and Carola Vallini, et al. Download PDF (535.0 KB) View HTML

Food sources used by sediment meiofauna in an intertidal Zostera noltii seagrass bed: a seasonal stable isotope study Benoit Lebreton, Pierre Richard, Robert Galois, Gilles Radenac and Amel Brahmia, et al. Download PDF (425.5 KB) View HTML

Proximity to competitors changes secondary metabolites of non-indigenous cup corals, Tubastraea spp., in the southwest Atlantic Bruno G. Lages, Beatriz G. Fleury, Ana M. C. Hovell, Claudia M. Rezende and Angelo C. Pinto, et al. Download PDF (465.6 KB) View HTML

The surgeonfish, Acanthurus bahianus, has crossed the Amazon–Orinoco outflow barrier Jessy Castellanos-Gell, Aymée Robainas-Barcia, Didier Casane, Pedro Chevalier-Monteagudo and Fabián Pina-Amargós, et al. Download PDF (324.5 KB) View HTML Supplemental

Open Access Seasonal variation in mineralization rates (C-N-P-Si) of mussel Mytilus edulis biodeposits H. M. Jansen, M. C. J. Verdegem, Ø. Strand and A. C. Smaal Download PDF (455.4 KB) View HTML

Short- and long-term consistency in the foraging niche of wandering albatrosses Filipe R. Ceia, Richard A. Phillips, Jaime A. Ramos, Yves Cherel and Rui P. Vieira, et al. Download PDF (526.3 KB) View HTML

Population dynamics of Eudendrium racemosum (Cnidaria, Hydrozoa) from the North Adriatic Sea C. G. Di Camillo, F. Betti, M. Bo, M. Martinelli and S. Puce, et al. Download PDF (666.7 KB) View HTML

Method

Field identification of ‘types’ A and B of the ascidian Ciona intestinalis in a region of sympatry Atsuko Sato, Nori Satoh and John D. D. Bishop Download PDF (458.3 KB) View HTML Supplemental

Aquaculture Journals Page: 314 of 331

Aquaculture Journals – Table of Contents

Imaging of surface O2 dynamics in corals with magnetic micro optode particles J. Fabricius-Dyg, G. Mistlberger, M. Staal, S. M. Borisov and I. Klimant, et al. Download PDF (721.5 KB) View HTML

Previous – Top – Next

VOLUME 159, PART 8, AUGUST 2012 Website

Research articles

Original Paper

Temperature, salinity and prey availability shape the marine migration of Arctic char, Salvelinus alpinus, in a macrotidal estuary Aaron D. Spares, Michael J. W. Stokesbury, Ron K. O’Dor and Terry A. Dick Download PDF (1.2 MB) View HTML

To roam or to home: site fidelity in a tropical coastal shark Danielle M. Knip, Michelle R. Heupel and Colin A. Simpfendorfer Download PDF (828.9 KB) View HTML

Contrasting population structures in two sympatric fishes in the Baltic Sea basin Jacquelin DeFaveri, Takahito Shikano, Nurul Izza Ab Ghani and Juha Merilä Download PDF (376.8 KB) View HTML Supplemental

Open Access Seasonal variations in vertical migration of glacier lanternfish, Benthosema glaciale Eivind Dypvik, Anders Røstad and Stein Kaartvedt Download PDF (1.8 MB) View HTML

N-acyl homoserine lactone production by bacteria within the sponge Suberites domuncula (Olivi, 1792) (Porifera, Demospongiae) Johan Gardères, Laure Taupin, Jasnizat Bin Saïdin, Alain Dufour and Gaël Le Pennec Download PDF (350.4 KB) View HTML Supplemental

Influence of different levels of dissolved oxygen on the success of Greenland halibut (Reinhardtius hippoglossoides) egg hatching and embryonic development Sahar Mejri, Réjean Tremblay, Yvan Lambert and Céline Audet Download PDF (420.6 KB) View HTML

Grazer avoidance may explain the invasiveness of the red alga Gracilaria vermiculophylla in Scandinavian waters Lars Brammer Nejrup, Morten Foldager Pedersen and Jonas Vinzent Download PDF (396.5 KB) View HTML

Metabolic enzyme activities in shallow- and deep-water chondrichthyans: implications for metabolic and locomotor capacity Nicole E. Condon, Jason R. Friedman and Jeffrey C. Drazen Download PDF (631.7 KB) View HTML

Underlying causes of habitat-associated differences in size of age-0 walleye pollock (Theragra chalcogramma) in the Gulf of Alaska A. Dougherty, K. Bailey, T. Vance and W. Cheng Download PDF (896.6 KB) View HTML

Aquaculture Journals Page: 315 of 331

Aquaculture Journals – Table of Contents

Parental diets determine the embryonic fatty acid profile of the tropical nudibranch Aeolidiella stephanieae: the effect of eating bleached anemones Miguel Costa Leal, Cristóvão Nunes, Daniel Alexandre, Teresa Lopes da Silva and Alberto Reis, et al. Download PDF (340.9 KB) View HTML

Sources of primary production supporting food webs in an arid coastal embayment I. Al-Maslamani, M. E. M. Walton, H. Kennedy and L. Le Vay Download PDF (428.8 KB) View HTML

Microbial consortia increase thermal tolerance of corals Justine A. Gilbert, Ross Hill, Martina A. Doblin and Peter J. Ralph Download PDF (551.3 KB) View HTML Supplemental

In situ thermal dynamics of shallow water corals is affected by tidal patterns and irradiance Isabel M. Jimenez, Anthony W. D. Larkum, Peter J. Ralph and Michael Kühl Download PDF (966.1 KB) View HTML

Symbiotic bacteria in the nudibranch mollusk Dendrodoris nigra: fatty acid composition and ultrastructure analysis Natalia V. Zhukova and Marina G. Eliseikina Download PDF (991.8 KB) View HTML

Increased seawater temperature and light during early springs accelerate receptacle growth of Fucus vesiculosus in the northern Baltic proper Patrik Kraufvelin, Ari T. Ruuskanen, Saara Bäck and George Russell Download PDF (658.7 KB) View HTML

Impact of miniature geolocation loggers on a small petrel, the thin-billed prion Pachyptila belcheri Petra Quillfeldt, Rona A. R. McGill, Robert W. Furness, Erich Möstl and Katrin Ludynia, et al. Download PDF (266.0 KB) View HTML

Population dynamics of the invasive bryozoan Membranipora membranacea along a 450-km latitudinal range in the subarctic northwestern Atlantic Scott Caines and Patrick Gagnon Download PDF (739.7 KB) View HTML

Open Access Distribution and diel vertical movements of mesopelagic scattering layers in the Red Sea Thor A. Klevjer, Daniel J. Torres and Stein Kaartvedt Download PDF (837.8 KB) View HTML

Foraging strategies of male Adélie penguins during their first incubation trip in relation to environmental conditions Manuelle Cottin, Ben Raymond, Akiko Kato, Françoise Amélineau and Yvon Le Maho, et al. Download PDF (656.3 KB) View HTML

Method

Open Access

Aquaculture Journals Page: 316 of 331

Aquaculture Journals – Table of Contents

An approach for particle sinking velocity measurements in the 3–400 μm size range and considerations on the effect of temperature on sinking rates Lennart Thomas Bach, Ulf Riebesell, Scarlett Sett, Sarah Febiri and Paul Rzepka, et al. Download PDF (532.9 KB) View HTML

Short Communication

Sperm polymorphism and genetic divergence in the mussel Perumytilus purpuratus Carolina Briones, Ricardo Guiñez, Orlando Garrido, Pablo A. Oyarzún and Jorge E. Toro, et al. Download PDF (350.1 KB) View HTML

Previous – Top – Next

VOLUME 159, PART 9, SEPTEMBER 2012 Website

Research articles

Original Paper

Recent history of the European Nassarius nitidus (Gastropoda): phylogeographic evidence of glacial refugia and colonization pathways Naiara Albaina, Jeanine L. Olsen, Lucía Couceiro, José Miguel Ruiz and Rodolfo Barreiro Download PDF (692.0 KB) View HTML Supplemental

Population structure and reproductive patterns of the NW Mediterranean deep- sea macrourid Trachyrincus scabrus (Rafinesque, 1810) U. Fernandez-Arcaya, L. Recasens, H. Murua, E. Ramirez-Llodra and G. Rotllant, et al. Download PDF (659.2 KB) View HTML

Cryptic species within the commercially most important lobster in the tropical Atlantic, the spiny lobster Panulirus argus Julia L. Tourinho, Antonio M. Solé-Cava and Cristiano Lazoski Download PDF (550.6 KB) View HTML

Energy budgets reveal equal benefits of varied migration strategies in northern gannets Stefan Garthe, Katrin Ludynia, Ommo Hüppop, Ulrike Kubetzki and Juan F. Meraz, et al. Download PDF (354.5 KB) View HTML

Reef coral reproduction in the equatorial eastern Pacific: Costa Rica, Panamá, and the Galápagos Islands (Ecuador). VII. Siderastreidae, Psammocora stellata and Psammocora profundacella P. W. Glynn, S. B. Colley, J. L. Maté, I. B. Baums and J. S. Feingold, et al. Download PDF (847.2 KB) View HTML Supplemental

The symbiotic relationship between Lychnorhiza lucerna (Scyphozoa, Rhizostomeae) and (Decapoda, Epialtidae) in the Río de la Plata (Argentina–Uruguay) M. P. Sal Moyano, A. Schiariti, D. A. Giberto, L. Diaz Briz and M. A. Gavio, et al. Download PDF (555.7 KB) View HTML

Trophic diversity in amphipods within a temperate eelgrass ecosystem as determined by gut contents and C and N isotope analysis

Aquaculture Journals Page: 317 of 331

Aquaculture Journals – Table of Contents

Seung Jin Jeong, Hae-Lip Suh and Chang-Keun Kang Download PDF (569.8 KB) View HTML

Metabolic suppression in thecosomatous pteropods as an effect of low temperature and hypoxia in the eastern tropical North Pacific Amy E. Maas, Karen F. Wishner and Brad A. Seibel Download PDF (509.8 KB) View HTML Supplemental

Open Access Egg buoyancy variability in local populations of Atlantic cod (Gadus morhua) Kyung-Mi Jung, Arild Folkvord, Olav Sigurd Kjesbu, Ann Lisbeth Agnalt and Anders Thorsen, et al. Download PDF (535.2 KB) View HTML

Kelp gulls attack Southern right whales: a conservation concern? Ana Fazio, Marcelo Bertellotti and Cecilia Villanueva Download PDF (433.4 KB) View HTML

Male mate choice and male–male competition in the hermit crab Pagurus nigrofascia: importance of female quality Yutaro Suzuki, Chiaki Yasuda, Fumio Takeshita and Satoshi Wada Download PDF (242.5 KB) View HTML

Assessment of AHS (Airborne Hyperspectral Scanner) sensor to map macroalgal communities on the Ría de vigo and Ría de Aldán coast (NW Spain) G. Casal, N. Sánchez-Carnero, J. A. Domínguez-Gómez, T. Kutser and J. Freire Download PDF (1.1 MB) View HTML

The selective advantage of host feminization: a case study of the green crab Carcinus maenas and the parasitic barnacle Sacculina carcini Tommy Kristensen, Anders Isberg Nielsen, Anders Isak Jørgensen, Kim N. Mouritsen and Henrik Glenner, et al. Download PDF (419.3 KB) View HTML

Role of temperature on lipid/fatty acid composition in Pacific cod (Gadus macrocephalus) eggs and unfed larvae Benjamin J. Laurel, Louise A. Copeman and Christopher C. Parrish Download PDF (360.3 KB) View HTML

Floating kelps in Patagonian Fjords: an important vehicle for rafting invertebrates and its relevance for biogeography Carla-Sophie Wichmann, Iván A. Hinojosa and Martin Thiel Download PDF (834.1 KB) View HTML Supplemental

Impact of ocean warming on the early ontogeny of cephalopods: a metabolic approach Marta S. Pimentel, Katja Trübenbach, Filipa Faleiro, Joana Boavida-Portugal and Tiago Repolho, et al. Download PDF (728.0 KB) View HTML

Effects of salinity stress on neurotransmission, energy metabolism, and anti- oxidant biomarkers of Carcinus maenas from two estuaries of the NW Iberian Peninsula Aurélie Pinto Rodrigues, Patrícia Correia Oliveira, Lúcia Guilhermino and Laura Guimarães Download PDF (600.3 KB) View HTML

Aquaculture Journals Page: 318 of 331

Aquaculture Journals – Table of Contents

Open Access Effects of predation and habitat structure on the abundance and population structure of the rock shrimp Rhynchocinetes typus (Caridea) on temperate rocky reefs Nicolas C. Ory, D. Dudgeon, C. P. Dumont, L. Miranda and M. Thiel Download PDF (554.8 KB) View HTML Supplemental

The invasive gastropod Crepidula fornicata: reproduction and recruitment in the intertidal at its northernmost range in Wales, UK, and implications for its secondary spread Katrin Bohn, Christopher Richardson and Stuart Jenkins Download PDF (604.4 KB) View HTML Supplemental

Tracking habitat and resource use for the jumbo squid Dosidicus gigas: a stable isotope analysis in the Northern Humboldt Current System Juan Argüelles, Anne Lorrain, Yves Cherel, Michelle Graco and Ricardo Tafur, et al. Download PDF (504.5 KB) View HTML

Previous – Top – Next

Aquaculture Journals Page: 319 of 331

Aquaculture Journals – Table of Contents

MMMaaarrriiinnneee BBBiiiooottteeeccchhhnnnooolllooogggyyy

VOLUME 14, PART 4, AUGUST 2012 Website

Research articles

Edible Seaweed, Eisenia bicyclis, Protects Retinal Ganglion Cells Death Caused by Oxidative Stress Kyung-A Kim, Sang Min Kim, Suk Woo Kang, Sang Il Jeon and Byung Hun Um, et al. Download PDF (719.0 KB) View HTML

Bioconversion of Iodoacetophenones by Marine Fungi Lenilson C. Rocha, Rodrigo F. Luiz, Isac G. Rosset, Cristiano Raminelli and Mirna H. R. Seleghim, et al. Download PDF (722.5 KB) View HTML

In Vivo RNA Interference of a Gonad-Specific Transforming Growth Factor-β in the Pacific Oyster Crassostrea gigas Arnaud Huvet, Elodie Fleury, Charlotte Corporeau, Virgile Quillien and Jean Yves Daniel, et al. Download PDF (592.0 KB) View HTML

Identification of a Δ5-like Fatty Acyl Desaturase from the Cephalopod Octopus vulgaris (Cuvier 1797) Involved in the Biosynthesis of Essential Fatty Acids Óscar Monroig, Juan C. Navarro, James R. Dick, Frederic Alemany and Douglas R. Tocher Download PDF (584.4 KB) View HTML

Transcriptomic Characterization of the Larval Stage in Gilthead Seabream (Sparus aurata) by 454 Pyrosequencing Manuel Yúfera, Silke Halm, Sergi Beltran, Berta Fusté and Josep V. Planas, et al. Download PDF (416.9 KB) View HTML Supplemental

Open Access Detection of Bioactive Exometabolites Produced by the Filamentous Marine Cyanobacterium Geitlerinema sp. Nelson H. Caicedo, Jolanta Kumirska, Jennifer Neumann, Stefan Stolte and Jorg Thöming Download PDF (357.3 KB) View HTML

Proteomic Strategy for Identifying Mollusc Shell Proteins Using Mild Chemical Degradation and Trypsin Digestion of Insoluble Organic Shell Matrix: A Pilot Study on Haliotis tuberculata Laurent Bédouet, Arul Marie, Sophie Berland, Benjamin Marie and Stéphanie Auzoux- Bordenave, et al. Download PDF (1.9 MB) View HTML

Identification and Characterization of piRNA-Like Small RNAs in the Gonad of Sea Urchin (Strongylocentrotus nudus) Zhenlin Wei, Xiaolin Liu and Huilin Zhang Download PDF (443.3 KB) View HTML

Inhibition of Japanese Encephalitis Virus Infection by the Sulfated Polysaccharide Extracts from Ulva lactuca Ya-Huang Chiu, Yi-Lin Chan, Tsung-Lin Li and Chang-Jer Wu Download PDF (398.2 KB) View HTML

Aquaculture Journals Page: 320 of 331

Aquaculture Journals – Table of Contents

Ran and Calcineurin Can Participate Collaboratively in the Regulation of Spermatogenesis in Scallop Hirotsugu Hino, Kana Arimoto, Michio Yazawa, Yota Murakami and Akiko Nakatomi Download PDF (509.9 KB) View HTML

Open Access Induction of Autophagy by Amino Acid Starvation in Fish Cells Takeshi Yabu, Shintaro Imamura, Nanami Mizusawa, Ken Touhata and Michiaki Yamashita Download PDF (362.6 KB) View HTML

Detection of Prorocentrum minimum (Pavillard) Schiller with an Electrochemiluminescence–Molecular Probe Assay Xia Zhu, Yu Zhen, Tiezhu Mi and Zhigang Yu Download PDF (329.0 KB) View HTML

Previous – Top – Next

VOLUME 14, PART 5, OCTOBER 2012 Website

Research articles

Genomics in Aquaculture International Symposium 2011 Guest Editors: Elena Sarropoulou , Jorge Fernandes and Zhanjiang Liu

Editorial Notes GIA 2011: Genomics in Aquaculture 2011 Symposium Elena Sarropoulou, Jorge Fernandes and Zhanjiang John Liu Download PDF (147.2 KB) View HTML

Microarray-Based Identification of Differentially Expressed Genes in Families of Turbot (Scophthalmus maximus) After Infection with Viral Haemorrhagic Septicaemia Virus (VHSV) P. Díaz-Rosales, A. Romero, P. Balseiro, S. Dios and B. Novoa, et al. Download PDF (387.2 KB) View HTML Supplemental

Estrogen Modulates Hepatic Gene Expression and Survival of Rainbow Trout Infected with Pathogenic Bacteria Yersinia ruckeri Michael Wenger, Aleksei Krasnov, Stanko Skugor, Elinor Goldschmidt-Clermont and Ursula Sattler, et al. Download PDF (416.2 KB) View HTML Supplemental

Nucleotide Enrichment of Live Feed: A Promising Protocol for Rearing of Atlantic Cod Gadus morhua Larvae Carlos Frederico Ceccon Lanes, Sylvie Bolla, Jorge M. O. Fernandes, Ove Nicolaisen and Viswanath Kiron, et al. Download PDF (638.5 KB) View HTML Supplemental

Exploring the Transcriptome of Atlantic Salmon (Salmo salar) Skin, a Major Defense Organ Giulia Micallef, Ralph Bickerdike, Caroline Reiff, Jorge M. O. Fernandes and Alan S. Bowman, et al. Download PDF (432.1 KB) View HTML Supplemental

Aquaculture Journals Page: 321 of 331

Aquaculture Journals – Table of Contents

Gene Expression Profiles of Spleen, Liver, and Head Kidney in Turbot (Scophthalmus maximus) Along the Infection Process with Philasterides dicentrarchi Using an Immune-Enriched Oligo-Microarray Belén G. Pardo, Adrián Millán, Antonio Gómez-Tato, Carlos Fernández and Carmen Bouza, et al. Download PDF (467.6 KB) View HTML Supplemental

Open Access Genomics in Eels — Towards Aquaculture and Biology Yuki Minegishi, Christiaan V. Henkel, Ron P. Dirks and Guido E. E. J. M. van den Thillart Download PDF (191.0 KB) View HTML

Open Access Genomic Approaches to Study Genetic and Environmental Influences on Fish Sex Determination and Differentiation Francesc Piferrer, Laia Ribas and Noelia Díaz Download PDF (709.1 KB) View HTML

Transcriptomic Response of Skeletal Muscle to Lipopolysaccharide in the Gilthead Seabream (Sparus aurata) Elisavet Kaitetzidou, Diego Crespo, Yoryia Vraskou, Efthimia Antonopoulou and Josep V. Planas Download PDF (912.7 KB) View HTML Supplemental

Expressed Sequences and Polymorphisms in Rohu Carp (Labeo rohita, Hamilton) Revealed by mRNA-seq Nicholas Robinson, Pramoda K. Sahoo, Matthew Baranski, Kanta Das Mahapatra and Jatindra N. Saha, et al. Download PDF (591.7 KB) View HTML Supplemental

Characterization of European Sea Bass Transcripts by RNA SEQ After Oral Vaccine Against V. anguillarum E. Sarropoulou, J. Galindo-Villegas, A. García-Alcázar, P. Kasapidis and V. Mulero Download PDF (365.3 KB) View HTML Supplemental

Dietary Lysine Imbalance Affects Muscle Proteome in Zebrafish (Danio rerio): A Comparative 2D-DIGE Study Mahaut de Vareilles, Luis E. C. Conceição, Pedro Gómez-Requeni, Katerina Kousoulaki and Nadège Richard, et al. Download PDF (359.5 KB) View HTML

Mapping of DNA Sex-Specific Markers and Genes Related to Sex Differentiation in Turbot (Scophthalmus maximus) Ana Viñas, Xoana Taboada, Luis Vale, Diego Robledo and Miguel Hermida, et al. Download PDF (224.5 KB) View HTML

Previous – Top – Next

Aquaculture Journals Page: 322 of 331

Aquaculture Journals – Table of Contents

NNNiiippppppooonnn SSSuuuiiisssaaannn GGGaaakkkkkkaaaiiissshhhiii

VOLUME 78, PART 3, MAY 2012 Website

Research articles

Lateral target strength of Euphausia pacifica measured by a tethered method YOSHIAKI FUKUDA, TOHRU MUKAI, KOUICHI SAWADA AND KOHJI IIDA

Effect of high water temperature rearing in the estivation period on the mortality and reproduction of Japanese sand lance Ammodytes personatus in the Seto Inland Sea NORIKO AKAI AND NORIKO UTSUMI

Effect of salinity on the survival, development and feeding of larvae of the horsehair crab Erimacrus isenbeckii reared in the laboratory TADAO JINBO, KATSUYUKI HAMASAKI AND MASAKAZU ASHIDATE

Influences of autumn preconditioning on proximate composition, carbohydrate-metabolizing enzyme activity of hybrid pearl oyster Pinctada fucata martensii and pearl quality KENICHI SONE, HIROFUMI YAMASHITA AND TSUYOSHI SUGITA

Stocking effectiveness of nigorobuna Carassius auratus grandoculis in Lake Biwa KOH-ICHI FUJIWARA, MASAYA MATSUO, TAKAHIRO USUKI, MORIHITO NEMOTO, SYOICHIRO TAKEOKA, MITSURU TANAKA AND SHUICHI KITADA

Genetic investigation of artificially raised Japanese flounder with extremely fused vertebrae EITARO SAWAYAMA AND MOTOHIRO TAKAGI

Removal of sea anemone Boloceroides mcmurrichi adhered to cultivated Caulerpa lentillifera RYUSEI ITO AND YOSHINOBU KAMIJYO

Comparison of extractive components and taste of soup from brackish water clam Corbicula japonica in different habitat waters of the Hinuma River system SEIJI OKAMOTO, HIROKO YAMAGUCHI, HIROKI KOYAMA, MISAKO NAKAYA, CHIE YONEDA AND SHUGO WATABE

Recovery from stress of spotted mackerel Scomber australasicus by briefly resting in a fish cage after capture stress treatment SEIKO TAMOTSU, TSUYOSHI SUGITA, KAZUHIRO TSURUDA, YUTAKA FUKUDA AND IKUO KIMURA

Suppression effect of ATP on freeze denaturation of fish myofibrillar protein YUMI OGATA, JYO SHINDO AND IKUO KIMURA

Asymmetric price transmission in the Japanese seafood market YUTARO SAKAI, TORU NAKAJIMA, TAKAHIRO MATSUI AND NOBUYUKI YAGI

Trophic level of Trichiurus japonicus in the Kii Channel, Japan, based on carbon and nitrogen stable isotope ratios (Short Paper) RYU DOIUCHI, NAOTAKA YASUE AND YASUYUKI TAKEDA

Aquaculture Journals Page: 323 of 331

Aquaculture Journals – Table of Contents

Development of a method of manufacturing surimi from by-product of frozen skipjack tuna loin (Short Paper) SHUJI AOSHIMA, SEIICHI HIRATSUKA, KYOKO KOIZUMI, KOUHEI IKEGAYA, YUSUKE SUZUKI AND NOBORU KATO

Previous – Top – Next

Aquaculture Journals Page: 324 of 331

Aquaculture Journals – Table of Contents

RRReeevvviiieeewwwsss iiinnn AAAqqquuuaaacccuuullltttuuurrreee

VOLUME 4, ISSUE 2, JUNE 2012 Website

Research articles

Effect of salinity on egg hatching, yolk sac absorption and larval rearing of Senegalese sole (Solea senegalensis Kaup 1858) (pages 49–58) Emilio A. Salas Leitón, Ana Rodriguez-Rúa, Esther Asensio, Carlos Infante, Manuel Manchado, Catalina Fernández-Díaz and José P. Cañavate Abstract Full Article (HTML) PDF(485K) References

Pathogenesis, virulence factors and virulence regulation of vibrios belonging to the Harveyi clade (pages 59–74) Hettipala Arachchige Darshanee Ruwandeepika, Thotawaththage Sanjeewa Prasad Jayaweera, Patit Paban Bhowmick, Indrani Karunasagar, Peter Bossier and Tom Defoirdt Abstract Full Article (HTML) PDF(317K) References

Use of chemicals and biological products in Asian aquaculture and their potential environmental risks: a critical review (pages 75–93) Andreu Rico, Kriengkrai Satapornvanit, Mohammad M. Haque, Jiang Min, Phuong T. Nguyen, Trevor C. Telfer and Paul J. van den Brink Abstract Full Article (HTML) PDF(249K) References

Economically important production relationships in channel catfish (Ictalurus punctatus) foodfish production (pages 94–107) Umesh Bastola and Carole R. Engle Abstract Full Article (HTML) PDF(402K) References

Interspecific fish hybrids in Brazil: management of genetic resources for sustainable use (pages 108–118) Diogo T. Hashimoto, José A. Senhorini, Fausto Foresti and Fábio Porto-Foresti Abstract Full Article (HTML) PDF(242K)

Chinese Abstracts

Chinese Abstracts (pages 119–123) Article first published online: 10 JUN 2012 | DOI: 10.1111/j.1753-5131.2012.01077.x Abstract Full Article (HTML) PDF(357K)

Previous – Top

Aquaculture Journals Page: 325 of 331

Aquaculture Journals – Table of Contents

TTTrrreeennndddsss iiinnn BBBiiiooottteeeccchhhnnnooolllooogggyyy

VOLUME 30, PART 7, JULY 2012 Website

Research articles

Letters

Laccase-based dye decolorization using agro-wastes: comment on Santhanam et al. P.K. Suresh, Sridhar Sundaram, Chinnathambi Velu Show preview | PDF (113 K) | Related articles | Related reference work articles

Response to P.K. et al.: Bacterial laccases still have a case Navaneetha Santhanam, Jorge M. Vivanco, Stephen R. Decker, Kenneth F. Reardon Show preview | PDF (74 K) | Related articles | Related reference work articles

Opinions

Next-generation sequencing offers new insights into DNA degradation Søren Overballe-Petersen, Ludovic Orlando, Eske Willerslev Show preview | PDF (375 K) | Related articles | Related reference work articles

Virus scaffolds as enzyme nano-carriers Daniela Cardinale, Noëlle Carette, Thierry Michon Show preview | PDF (779 K) | Related articles | Related reference work articles

Reviews

Systems biotechnology of animal cells: the road to prediction Nuno Carinhas, Rui Oliveira, Paula Marques Alves, Manuel J.T. Carrondo, Ana P. Teixeira Show preview | PDF (455 K) | Related articles | Related reference work articles

Precision genetic engineering in large mammals Wiebke Garrels, Zoltan Ivics, Wilfried A. Kues Show preview | PDF (1273 K) | Related articles | Related reference work articles

Semiconductor quantum dots for in vitro diagnostics and cellular imaging Zongwen Jin, Niko Hildebrandt Show preview | PDF (2065 K) | Related articles | Related reference work articles

Previous – Top – Next

Aquaculture Journals Page: 326 of 331

Aquaculture Journals – Table of Contents

VOLUME 30, PART 8, AUGUST 2012 Website

Research articles

Letters miRNAs – pathway engineering of CHO cell factories that avoids translational burdening Matthias Hackl, Nicole Borth, Johannes Grillari Show preview | PDF (105 K) | Related articles | Related reference work articles

Next generation stent coatings: convergence of biotechnology and nanotechnology Aaron Tan, Mohammad S. Alavijeh, Alexander M. Seifalian Show preview | PDF (828 K) | Related articles | Related reference work articles

Opinions

Strategy and tactics of disarming GHG at the source: N2O reductase crops Shen Wan, Tonya Lynn Ward, Illimar Altosaar Show preview | PDF (1060 K) | Related articles | Related reference work articles

Plant–microbe interactions: novel applications for exploitation in multipurpose remediation technologies P.C. Abhilash, Jeff R. Powell, Harikesh B. Singh, Brajesh K. Singh Show preview | PDF (329 K) | Related articles | Related reference work articles

Reviews

Behavioral barcoding in the cloud: embracing data-intensive digital phenotyping in neuropharmacology David Kokel, Andrew J. Rennekamp, Asmi H. Shah, Urban Liebel, Randall T. Peterson Show preview | PDF (770 K) | Related articles | Related reference work articles

Feature Review

Mimicking dynamic in vivo environments with stimuli-responsive materials for cell culture Jungwook Kim, Ryan C. Hayward Show preview | PDF (2539 K) | Related articles | Related reference work articles

Previous – Top – Next

Aquaculture Journals Page: 327 of 331

Aquaculture Journals – Table of Contents

VOLUME 30, PART 9, SEPTEMBER 2012 Website

Research articles

Reviews

Next generation deep sequencing and vaccine design: today and tomorrow Fabio Luciani, Rowena A. Bull, Andrew R. Lloyd Show preview | PDF (681 K) | Related articles | Related reference work articles

Biofilms as living catalysts in continuous chemical syntheses Babu Halan, Katja Buehler, Andreas Schmid Show preview | PDF (1533 K) | Related articles | Related reference work articles

Mass spectrometry imaging is moving toward drug protein co-localization Rima Ait-Belkacem, Lyna Sellami, Claude Villard, Edwin DePauw, David Calligaris, Daniel Lafitte Show preview | PDF (1029 K) | Related articles | Related reference work articles

Cultivation of unculturable soil bacteria Van H.T. Pham, Jaisoo Kim Show preview | PDF (800 K) | Related articles | Related reference work articles

Feature Review

Colloidal systems for drug delivery: from design to therapy Mariana Beija, Robert Salvayre, Nancy Lauth-de Viguerie, Jean-Daniel Marty Show preview | PDF (1201 K) | Related articles | Related reference work articles

Previous – Top – Next

Aquaculture Journals Page: 328 of 331

Aquaculture Journals – Table of Contents

TTTrrreeennndddsss iiinnn MMMiiicccrrrooobbbiiiooolllooogggyyy

VOLUME 20, PART 6, JUNE 2012 Website

Research articles

Letter

Contribution of holins to protein trafficking: secretion, leakage or lysis? Mickaël Desvaux Show preview | PDF (622 K) | Related articles | Related reference work articles

Opinion

Plasmid-mediated horizontal gene transfer is a coevolutionary process Ellie Harrison, Michael A. Brockhurst Show preview | PDF (232 K) | Related articles | Related reference work articles

Reviews

Mucosal HIV-1 transmission and prevention strategies in BLT humanized mice Paul W. Denton, J. Victor Garcia Show preview | PDF (239 K) | Related articles | Related reference work articles

Innovations in modeling influenza virus infections in the laboratory Kortney M. Gustin, Jessica A. Belser, Jacqueline M. Katz, Terrence M. Tumpey, Taronna R. Maines Show preview | PDF (634 K) | Related articles | Related reference work articles

Viral disruption of the blood–brain barrier Katherine R. Spindler, Tien-Huei Hsu Show preview | PDF (329 K) | Related articles | Related reference work articles

Artificial activation of toxin–antitoxin systems as an antibacterial strategy Julia J. Williams, Paul J. Hergenrother Show preview | PDF (483 K) | Related articles | Related reference work articles

Exploitation of evolutionarily conserved amoeba and mammalian processes by Legionella Tasneem Al-Quadan, Christopher T. Price, Yousef Abu Kwaik Show preview | PDF (730 K) | Related articles | Related reference work articles

Previous – Top

Aquaculture Journals Page: 329 of 331

Aquaculture Journals – Table of Contents

VOLUME 20, PART 7, JULY 2012 Website

Research articles

Opinion

The archaellum: an old motility structure with a new name Ken F. Jarrell, Sonja-Verena Albers Show preview | PDF (1493 K) | Related articles | Related reference work articles

Reviews

Interaction between the intestinal microbiota and host in Clostridium difficile colonization resistance Robert A. Britton, Vincent B. Young Show preview | PDF (689 K) | Related articles | Related reference work articles

Shedding light on Salmonella carriers Smita Gopinath, Sarah Carden, Denise Monack Show preview | PDF (252 K) | Related articles | Related reference work articles

Chaperone-dependent mechanisms for acid resistance in enteric bacteria Weizhe Hong, Ye E. Wu, Xinmiao Fu, Zengyi Chang Show preview | PDF (2356 K) | Related articles | Related reference work articles

Evolution of virulence in opportunistic pathogens: generalism, plasticity, and control Sam P. Brown, Daniel M. Cornforth, Nicole Mideo Show preview | PDF (291 K) | Related articles | Related reference work articles

Towards selective inhibitors of adenylyl cyclase toxin from Bordetella pertussis Roland Seifert, Stefan Dove Show preview | PDF (1352 K) | Related articles | Related reference work articles Previous – Top

VOLUME 20, PART 8, AUGUST 2012 Website

Research articles

Letter

Response to Gribaldo and Brochier-Armanet: time for order in microbial systematics George M. Garrity, Aharon Oren

Aquaculture Journals Page: 330 of 331

Aquaculture Journals – Table of Contents

Show preview | PDF (89 K) | Related articles | Related reference work articles

Opinion

New perspectives into bacterial DNA transfer to human cells Matxalen Llosa, Gunnar Schröder, Christoph Dehio Show preview | PDF (548 K) | Related articles | Related reference work articles

Reviews

Listeriolysin O: the Swiss army knife of Listeria Mélanie Anne Hamon, David Ribet, Fabrizia Stavru, Pascale Cossart Show preview | PDF (1610 K) | Related articles | Related reference work articles

Microbicides: still a long road to success Christophe Vanpouille, Anush Arakelyan, Leonid Margolis Show preview | PDF (872 K) | Related articles | Related reference work articles

Customizing cell signaling using engineered genetic logic circuits Baojun Wang, Martin Buck Show preview | PDF (652 K) | Related articles | Related reference work articles

Intestinal microbiota is a plastic factor responding to environmental changes Marco Candela, Elena Biagi, Simone Maccaferri, Silvia Turroni, Patrizia Brigidi Show preview | PDF (329 K) | Related articles | Related reference work articles

Viral and host control of cytomegalovirus maturation Ritesh Tandon, Edward S. Mocarski Show preview | PDF (2399 K) | Related articles | Related reference work articles

Previous – Top

Aquaculture Journals Page: 331 of 331