Chromosomal Evolution and Apomixis in the Cruciferous Tribe Boechereae
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"National List of Vascular Plant Species That Occur in Wetlands: 1996 National Summary."
Intro 1996 National List of Vascular Plant Species That Occur in Wetlands The Fish and Wildlife Service has prepared a National List of Vascular Plant Species That Occur in Wetlands: 1996 National Summary (1996 National List). The 1996 National List is a draft revision of the National List of Plant Species That Occur in Wetlands: 1988 National Summary (Reed 1988) (1988 National List). The 1996 National List is provided to encourage additional public review and comments on the draft regional wetland indicator assignments. The 1996 National List reflects a significant amount of new information that has become available since 1988 on the wetland affinity of vascular plants. This new information has resulted from the extensive use of the 1988 National List in the field by individuals involved in wetland and other resource inventories, wetland identification and delineation, and wetland research. Interim Regional Interagency Review Panel (Regional Panel) changes in indicator status as well as additions and deletions to the 1988 National List were documented in Regional supplements. The National List was originally developed as an appendix to the Classification of Wetlands and Deepwater Habitats of the United States (Cowardin et al.1979) to aid in the consistent application of this classification system for wetlands in the field.. The 1996 National List also was developed to aid in determining the presence of hydrophytic vegetation in the Clean Water Act Section 404 wetland regulatory program and in the implementation of the swampbuster provisions of the Food Security Act. While not required by law or regulation, the Fish and Wildlife Service is making the 1996 National List available for review and comment. -
Taxa Named in Honor of Ihsan A. Al-Shehbaz
TAXA NAMED IN HONOR OF IHSAN A. AL-SHEHBAZ 1. Tribe Shehbazieae D. A. German, Turczaninowia 17(4): 22. 2014. 2. Shehbazia D. A. German, Turczaninowia 17(4): 20. 2014. 3. Shehbazia tibetica (Maxim.) D. A. German, Turczaninowia 17(4): 20. 2014. 4. Astragalus shehbazii Zarre & Podlech, Feddes Repert. 116: 70. 2005. 5. Bornmuellerantha alshehbaziana Dönmez & Mutlu, Novon 20: 265. 2010. 6. Centaurea shahbazii Ranjbar & Negaresh, Edinb. J. Bot. 71: 1. 2014. 7. Draba alshehbazii Klimeš & D. A. German, Bot. J. Linn. Soc. 158: 750. 2008. 8. Ferula shehbaziana S. A. Ahmad, Harvard Pap. Bot. 18: 99. 2013. 9. Matthiola shehbazii Ranjbar & Karami, Nordic J. Bot. doi: 10.1111/j.1756-1051.2013.00326.x, 10. Plocama alshehbazii F. O. Khass., D. Khamr., U. Khuzh. & Achilova, Stapfia 101: 25. 2014. 11. Alshehbazia Salariato & Zuloaga, Kew Bulletin …….. 2015 12. Alshehbzia hauthalii (Gilg & Muschl.) Salariato & Zuloaga 13. Ihsanalshehbazia Tahir Ali & Thines, Taxon 65: 93. 2016. 14. Ihsanalshehbazia granatensis (Boiss. & Reuter) Tahir Ali & Thines, Taxon 65. 93. 2016. 15. Aubrieta alshehbazii Dönmez, Uǧurlu & M.A.Koch, Phytotaxa 299. 104. 2017. 16. Silene shehbazii S.A.Ahmad, Novon 25: 131. 2017. PUBLICATIONS OF IHSAN A. AL-SHEHBAZ 1973 1. Al-Shehbaz, I. A. 1973. The biosystematics of the genus Thelypodium (Cruciferae). Contrib. Gray Herb. 204: 3-148. 1977 2. Al-Shehbaz, I. A. 1977. Protogyny, Cruciferae. Syst. Bot. 2: 327-333. 3. A. R. Al-Mayah & I. A. Al-Shehbaz. 1977. Chromosome numbers for some Leguminosae from Iraq. Bot. Notiser 130: 437-440. 1978 4. Al-Shehbaz, I. A. 1978. Chromosome number reports, certain Cruciferae from Iraq. -
Diploid Apomicts of the Boechera Holboellii Complex Display Large-Scale Chromosome Substitutions and Aberrant Chromosomes
Diploid apomicts of the Boechera holboellii complex display large-scale chromosome substitutions and aberrant chromosomes Laksana Kantama*†, Timothy F. Sharbel‡, M. Eric Schranz§, Thomas Mitchell-Olds¶, Sacco de Vries*, and Hans de Jongʈ** *Laboratory of Biochemistry, Wageningen University, Dreijenlaan 3, NL-6703 HA, Wageningen, The Netherlands; ‡Apomixis Research Group, Department of Cytogenetics and Genome Analysis, Leibniz Institute of Plant Genetics and Crop Plant Research, D-06466 Gatersleben, Germany; §Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Kruislaan 318, NL-1098 MS, Amsterdam, The Netherlands; ¶Department of Biology, Duke University, Durham, NC 27708; and ʈLaboratory of Genetics, Wageningen University, Arboretumlaan 4, NL-6703 BD, Wageningen, The Netherlands Communicated by Maarten Koornneef, Wageningen University and Research Centre, Wageningen, The Netherlands, July 15, 2007 (received for review May 20, 2007) We conducted a cytogenetic study of sexual lines of Boechera holboellii is polyphyletic. Its sequence and microsatellite analyses and seven diploid apomic- have shown that B. divaricarpa arose through hybridization (14 ؍ stricta and Boechera holboellii (2n tic accessions of their interspecific hybrid Boechera divaricarpa and between sexual B. stricta and B. holboellii or a closely related or 15). By studying chromosome morphology, species (3, 5, 6). The level of allelic variation is comparable 14 ؍ B. holboellii (2n rDNA repeats, genome painting, male meiosis, pollen morphology, between B. divaricarpa and B. holboellii, and a low number of and flow-cytometry seed screens, we revealed an unexpected species-specific alleles suggests that the hybrid originated re- plethora of chromosome forms, pairing behavior, and hybrid cently (6). Multiple evolutionary origins of triploidy in Boechera composition in all apomictic lines. -
National Wetlands Inventory Map Report for Quinault Indian Nation
National Wetlands Inventory Map Report for Quinault Indian Nation Project ID(s): R01Y19P01: Quinault Indian Nation, fiscal year 2019 Project area The project area (Figure 1) is restricted to the Quinault Indian Nation, bounded by Grays Harbor Co. Jefferson Co. and the Olympic National Park. Appendix A: USGS 7.5-minute Quadrangles: Queets, Salmon River West, Salmon River East, Matheny Ridge, Tunnel Island, O’Took Prairie, Thimble Mountain, Lake Quinault West, Lake Quinault East, Taholah, Shale Slough, Macafee Hill, Stevens Creek, Moclips, Carlisle. • < 0. Figure 1. QIN NWI+ 2019 project area (red outline). Source Imagery: Citation: For all quads listed above: See Appendix A Citation Information: Originator: USDA-FSA-APFO Aerial Photography Field Office Publication Date: 2017 Publication place: Salt Lake City, Utah Title: Digital Orthoimagery Series of Washington Geospatial_Data_Presentation_Form: raster digital data Other_Citation_Details: 1-meter and 1-foot, Natural Color and NIR-False Color Collateral Data: . USGS 1:24,000 topographic quadrangles . USGS – NHD – National Hydrography Dataset . USGS Topographic maps, 2013 . QIN LiDAR DEM (3 meter) and synthetic stream layer, 2015 . Previous National Wetlands Inventories for the project area . Soil Surveys, All Hydric Soils: Weyerhaeuser soil survey 1976, NRCS soil survey 2013 . QIN WET tables, field photos, and site descriptions, 2016 to 2019, Janice Martin, and Greg Eide Inventory Method: Wetland identification and interpretation was done “heads-up” using ArcMap versions 10.6.1. US Fish & Wildlife Service (USFWS) National Wetlands Inventory (NWI) mapping contractors in Portland, Oregon completed the original aerial photo interpretation and wetland mapping. Primary authors: Nicholas Jones of SWCA Environmental Consulting. 100% Quality Control (QC) during the NWI mapping was provided by Michael Holscher of SWCA Environmental Consulting. -
Sierra Nevada Framework FEIS Chapter 3
table of contrents Sierra Nevada Forest Plan Amendment – Part 4.6 4.6. Vascular Plants, Bryophytes, and Fungi4.6. Fungi Introduction Part 3.1 of this chapter describes landscape-scale vegetation patterns. Part 3.2 describes the vegetative structure, function, and composition of old forest ecosystems, while Part 3.3 describes hardwood ecosystems and Part 3.4 describes aquatic, riparian, and meadow ecosystems. This part focuses on botanical diversity in the Sierra Nevada, beginning with an overview of botanical resources and then presenting a more detailed analysis of the rarest elements of the flora, the threatened, endangered, and sensitive (TES) plants. The bryophytes (mosses and liverworts), lichens, and fungi of the Sierra have been little studied in comparison to the vascular flora. In the Pacific Northwest, studies of these groups have received increased attention due to the President’s Northwest Forest Plan. New and valuable scientific data is being revealed, some of which may apply to species in the Sierra Nevada. This section presents an overview of the vascular plant flora, followed by summaries of what is generally known about bryophytes, lichens, and fungi in the Sierra Nevada. Environmental Consequences of the alternatives are only analyzed for the Threatened, Endangered, and Sensitive plants, which include vascular plants, several bryophytes, and one species of lichen. 4.6.1. Vascular plants4.6.1. plants The diversity of topography, geology, and elevation in the Sierra Nevada combine to create a remarkably diverse flora (see Section 3.1 for an overview of landscape patterns and vegetation dynamics in the Sierra Nevada). More than half of the approximately 5,000 native vascular plant species in California occur in the Sierra Nevada, despite the fact that the range contains less than 20 percent of the state’s land base (Shevock 1996). -
Selected Wildflowers of the Modoc National Forest Selected Wildflowers of the Modoc National Forest
United States Department of Agriculture Selected Wildflowers Forest Service of the Modoc National Forest An introduction to the flora of the Modoc Plateau U.S. Forest Service, Pacific Southwest Region i Cover image: Spotted Mission-Bells (Fritillaria atropurpurea) ii Selected Wildflowers of the Modoc National Forest Selected Wildflowers of the Modoc National Forest Modoc National Forest, Pacific Southwest Region U.S. Forest Service, Pacific Southwest Region iii Introduction Dear Visitor, e in the Modoc National Forest Botany program thank you for your interest in Wour local flora. This booklet was prepared with funds from the Forest Service Celebrating Wildflowers program, whose goals are to serve our nation by introducing the American public to the aesthetic, recreational, biological, ecological, medicinal, and economic values of our native botanical resources. By becoming more thoroughly acquainted with local plants and their multiple values, we hope to consequently in- crease awareness and understanding of the Forest Service’s management undertakings regarding plants, including our rare plant conservation programs, invasive plant man- agement programs, native plant materials programs, and botanical research initiatives. This booklet is a trial booklet whose purpose, as part of the Celebrating Wildflowers program (as above explained), is to increase awareness of local plants. The Modoc NF Botany program earnestly welcomes your feedback; whether you found the book help- ful or not, if there were too many plants represented or too few, if the information was useful to you or if there is more useful information that could be added, or any other comments or concerns. Thank you. Forest J. R. Gauna Asst. -
Phylogenetic Position and Generic Limits of Arabidopsis (Brassicaceae)
PHYLOGENETIC POSITION Steve L. O'Kane, Jr.2 and Ihsan A. 3 AND GENERIC LIMITS OF Al-Shehbaz ARABIDOPSIS (BRASSICACEAE) BASED ON SEQUENCES OF NUCLEAR RIBOSOMAL DNA1 ABSTRACT The primary goals of this study were to assess the generic limits and monophyly of Arabidopsis and to investigate its relationships to related taxa in the family Brassicaceae. Sequences of the internal transcribed spacer region (ITS-1 and ITS-2) of nuclear ribosomal DNA, including 5.8S rDNA, were used in maximum parsimony analyses to construct phylogenetic trees. An attempt was made to include all species currently or recently included in Arabidopsis, as well as species suggested to be close relatives. Our ®ndings show that Arabidopsis, as traditionally recognized, is polyphyletic. The genus, as recircumscribed based on our results, (1) now includes species previously placed in Cardaminopsis and Hylandra as well as three species of Arabis and (2) excludes species now placed in Crucihimalaya, Beringia, Olimar- abidopsis, Pseudoarabidopsis, and Ianhedgea. Key words: Arabidopsis, Arabis, Beringia, Brassicaceae, Crucihimalaya, ITS phylogeny, Olimarabidopsis, Pseudoar- abidopsis. Arabidopsis thaliana (L.) Heynh. was ®rst rec- netic studies and has played a major role in un- ommended as a model plant for experimental ge- derstanding the various biological processes in netics over a half century ago (Laibach, 1943). In higher plants (see references in Somerville & Mey- recent years, many biologists worldwide have fo- erowitz, 2002). The intraspeci®c phylogeny of A. cused their research on this plant. As indicated by thaliana has been examined by Vander Zwan et al. Patrusky (1991), the widespread acceptance of A. (2000). Despite the acceptance of A. -
Expression Profiling and Local Adaptation of Boechera Holboellii
CORE Metadata, citation and similar papers at core.ac.uk Provided by DigitalCommons@CalPoly µBlackwellExpression Publishing Ltd profiling and local adaptation of Boechera holboellii populations for water use efficiency across a naturally occurring water stress gradient CHARLES A. KNIGHT HEIKO VOGEL JUERGEN KROYMANN ALICE SHUMATE HANNEKE WITSENBOER and THOMAS MITCHELL-OLDS Abstract We studied the physiological basis of local adaptation to drought in Boechera holboellii, a perennial relative of Arabidopsis thaliana, and used cDNA–AFLPs to identify candidate genes showing differential expression in these populations. We compared two populations of B. holboellii from contrasting water environments in a reciprocal transplant experiment, as well as in a laboratory dry-down experiment. We continuously measured the water con tent of soils using time domain reflectometery (TDR). We compared populations for their water use efficiency (WUE), root/shoot ratios (R:S) and leaf mass per unit area (LMA) in the field and in the laboratory, and identified candidate genes that (i) responded plastically to water stress and (ii) were differentially expressed between the two populations. Genotypes from the drier site had higher WUE, which was attributable to a large reduction in transpi rational water loss. The xeric-adapted population also had increased investment in root bio mass and greater leaf mass per unit area. Reciprocal transplants in the field had significantly greater survival in their native habitat. In total, 450 cDNA-AFLP fragments showed significant changes between drought and control treatments. Furthermore, some genes showed genotype (population)-specific patterns of up- or down-regulation in response to drought. Three hundred cDNA-AFLP bands were sequenced leading to the identification of cDNAs coding for proteins involved in signal transduction, transcriptional regulation, redox regulation, oxidative stress and pathways involved in stress adaptation. -
The Evolution of Apomixis in Angiosperms: a Reappraisal E
This article was downloaded by: [Universita Di Pisa], [L. Peruzzi] On: 13 September 2012, At: 08:11 Publisher: Taylor & Francis Informa Ltd Registered in England and Wales Registered Number: 1072954 Registered office: Mortimer House, 37-41 Mortimer Street, London W1T 3JH, UK Plant Biosystems - An International Journal Dealing with all Aspects of Plant Biology: Official Journal of the Societa Botanica Italiana Publication details, including instructions for authors and subscription information: http://www.tandfonline.com/loi/tplb20 The evolution of apomixis in angiosperms: A reappraisal E. Hörandl a & D. Hojsgaard a a Department of Systematic Botany, Georg-August-University of Göttingen, Untere Karspüle 2, Göttingen, 37073, Germany Accepted author version posted online: 15 Aug 2012.Version of record first published: 13 Sep 2012. To cite this article: E. Hörandl & D. Hojsgaard (2012): The evolution of apomixis in angiosperms: A reappraisal, Plant Biosystems - An International Journal Dealing with all Aspects of Plant Biology: Official Journal of the Societa Botanica Italiana, 146:3, 681-693 To link to this article: http://dx.doi.org/10.1080/11263504.2012.716795 PLEASE SCROLL DOWN FOR ARTICLE Full terms and conditions of use: http://www.tandfonline.com/page/terms-and-conditions This article may be used for research, teaching, and private study purposes. Any substantial or systematic reproduction, redistribution, reselling, loan, sub-licensing, systematic supply, or distribution in any form to anyone is expressly forbidden. The publisher does not give any warranty express or implied or make any representation that the contents will be complete or accurate or up to date. The accuracy of any instructions, formulae, and drug doses should be independently verified with primary sources. -
Plant List Lomatium Mohavense Mojave Parsley 3 3 Lomatium Nevadense Nevada Parsley 3 Var
Scientific Name Common Name Fossil Falls Alabama Hills Mazourka Canyon Div. & Oak Creeks White Mountains Fish Slough Rock Creek McGee Creek Parker Bench East Mono Basin Tioga Pass Bodie Hills Cicuta douglasii poison parsnip 3 3 3 Cymopterus cinerarius alpine cymopterus 3 Cymopterus terebinthinus var. terebinth pteryxia 3 3 petraeus Ligusticum grayi Gray’s lovage 3 Lomatium dissectum fern-leaf 3 3 3 3 var. multifidum lomatium Lomatium foeniculaceum ssp. desert biscuitroot 3 fimbriatum Plant List Lomatium mohavense Mojave parsley 3 3 Lomatium nevadense Nevada parsley 3 var. nevadense Lomatium rigidum prickly parsley 3 Taxonomy and nomenclature in this species list are based on Lomatium torreyi Sierra biscuitroot 3 western sweet- the Jepson Manual Online as of February 2011. Changes in Osmorhiza occidentalis 3 3 ADOXACEAE–ASTERACEAE cicely taxonomy and nomenclature are ongoing. Some site lists are Perideridia bolanderi Bolander’s 3 3 more complete than others; all of them should be considered a ssp. bolanderi yampah Lemmon’s work in progress. Species not native to California are designated Perideridia lemmonii 3 yampah with an asterisk (*). Please visit the Inyo National Forest and Perideridia parishii ssp. Parish’s yampah 3 3 Bureau of Land Management Bishop Resource Area websites latifolia for periodic updates. Podistera nevadensis Sierra podistera 3 Sphenosciadium ranger’s buttons 3 3 3 3 3 capitellatum APOCYNACEAE Dogbane Apocynum spreading 3 3 androsaemifolium dogbane Scientific Name Common Name Fossil Falls Alabama Hills Mazourka Canyon Div. & Oak Creeks White Mountains Fish Slough Rock Creek McGee Creek Parker Bench East Mono Basin Tioga Pass Bodie Hills Apocynum cannabinum hemp 3 3 ADOXACEAE Muskroot Humboldt Asclepias cryptoceras 3 Sambucus nigra ssp. -
Index of Botanist Names Associated with the Flora of Putnam Park Frederick Warren King
Index of Botanist Names Associated with the Flora of Putnam Park Frederick Warren King Standard abbreviation form refers to how the botanist’s name may appear in the citation of a species. For a number of the botanists who appear below, they are the authorities or co- authorities for the names of many additional species. The focus in this list is on flowers that appear in Putnam Park. Andrews, Henry Cranke (c. 1759 – 1830). English botanist, botanical artist, and engraver. He is the authority for Scilla siberica, Siberian Squill. Standard abbreviation form: Andrews Aiton, William (1731–1793). He was a Scottish botanist, appointed director of Royal Botanic Gardens, Kew in 1759. He is the authority for Solidago nemoralis, Vaccinium angustifolium, Viola pubescens, and Viola sagittate. He is the former authority for Actaea rubra and Clintonia borealis. Standard abbreviation form: Aiton Aiton, William Townsend (1766 – 1849). English botanist, son of William Aiton. He is the authority for Barbarea vulgaris, Winter Cress. Standard abbreviation form: W.T. Aiton Al-Shehbaz, Ihsan Ali (b. 1939). Iraqi born American botanist, Senior Curator at the Missouri Botanical Garden. Co-authority for Arabidopsis lyrate, Lyre-leaved Rock Cress and Boechera grahamii, Spreading-pod Rock Cress, and authority for Boechera laevigata, Smooth Rock Cress. Standard abbreviation form: Al-Shehbaz Avé-Lallemant, Julius Léopold Eduard (1803 – 1867). German botanist, co-authority for Thalictrum dasycarpum, Tall Meadow Rue. The genus Lallemantia is named in his honor. Standard abbreviation form: Avé-Lall. Barnhart, John Hendley (1871 – 1949). Was an American botanist and non-practicing MD. He is the authority for Ratibida pinnata. -
Karyotype Evolution in Apomictic Boechera and the Origin of the Aberrant Chromosomes
The Plant Journal (2015) 82, 785–793 doi: 10.1111/tpj.12849 Karyotype evolution in apomictic Boechera and the origin of the aberrant chromosomes Terezie Mandakov a1, M. Eric Schranz2, Timothy F. Sharbel3, Hans de Jong4 and Martin A. Lysak1,* 1CEITEC – Central European Institute of Technology, Masaryk University, Brno, CZ-62500 Czech Republic, 2Plant Systematics Group, Wageningen University (WU), Droevendaalsesteeg 1, Wageningen, 6708 PB The Netherlands, 3Apomixis Research Group, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, D-06466 Germany, and 4Laboratory of Genetics, Wageningen UR PSG, P.O. Box 16, Wageningen, 6700 AA The Netherlands Received 17 February 2015; revised 24 March 2015; accepted 1 April 2015; published online 10 April 2015. *For correspondence (e-mail [email protected]). SUMMARY Chromosome rearrangements may result in both decrease and increase of chromosome numbers. Here we have used comparative chromosome painting (CCP) to reconstruct the pathways of descending and ascend- ing dysploidy in the genus Boechera (tribe Boechereae, Brassicaceae). We describe the origin and structure of three Boechera genomes and establish the origin of the previously described aberrant Het and Del chro- mosomes found in Boechera apomicts with euploid (2n = 14) and aneuploid (2n = 15) chromosome number. CCP analysis allowed us to reconstruct the origin of seven chromosomes in sexual B. stricta and apomictic B. divaricarpa from the ancestral karyotype (n = 8) of Brassicaceae lineage I. Whereas three chromosomes (BS4, BS6, and BS7) retained their ancestral structure, five chromosomes were reshuffled by reciprocal translocations to form chromosomes BS1-BS3 and BS5. The reduction of the chromosome number (from x = 8tox= 7) was accomplished through the inactivation of a paleocentromere on chromosome BS5.