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South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae)
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2013 South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae) Lendel, Anita Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-93287 Dissertation Published Version Originally published at: Lendel, Anita. South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae). 2013, University of Zurich, Faculty of Science. South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae) _________________________________________________________________________________ Dissertation zur Erlangung der naturwissenschaftlichen Doktorwürde (Dr.sc.nat.) vorgelegt der Mathematisch-naturwissenschaftlichen Fakultät der Universität Zürich von Anita Lendel aus Kroatien Promotionskomitee: Prof. Dr. H. Peter Linder (Vorsitz) PD. Dr. Reto Nyffeler Prof. Dr. Elena Conti Zürich, 2013 Table of Contents Acknowledgments 1 Introduction 3 Chapter 1. Phylogenetics and taxonomy of the tribe Cereeae s.l., with particular focus 15 on the subtribe Trichocereinae (Cactaceae – Cactoideae) Chapter 2. Floral evolution in the South American tribe Cereeae s.l. (Cactaceae: 53 Cactoideae): Pollination syndromes in a comparative phylogenetic context Chapter 3. Contemporaneous and recent radiations of the world’s major succulent 86 plant lineages Chapter 4. Tackling the molecular dating paradox: underestimated pitfalls and best 121 strategies when fossils are scarce Outlook and Future Research 207 Curriculum Vitae 209 Summary 211 Zusammenfassung 213 Acknowledgments I really believe that no one can go through the process of doing a PhD and come out without being changed at a very profound level. -
Asteropeia Micraster
UNIVERSITÉ D'ANTANANARIVO ÉCOLE SUPÉRIEURE DES SCIENCES AGRONOMIQUES DÉPARTEMENT DES EAUX ET FORÊTS PROMOTION FITSINJO (2001-2006) MÉMOIRE DE FIN D'ÉTUDES Étude de la distribution, de l'écologie et du risque d'extinction des espèces Asteropeia micraster HALLIER , Dalbergia baroni BAKER et Dalbergia chapelieri BAILLON en vue de l'élaboration d'une stratégie de conservation de ces espèces dans la forêt littorale d'Agnalazaha (Mahabo Mananivo, Farafangana) présenté par RALAMBOMANANA-ANDRIAMAHEFA Andriamarohaja Membres du Jury Monsieur RANDRIAMBOAVONJY Jean Chrisostome Madame RAJOELISON Lalanirina Gabrielle Monsieur RABARISON Harison Monsieur RAKOTOARIVONY Fortunat Date de soutenance : 20 Novembre 2006 Résumé La forêt littorale fait partie des écosystèmes naturels les plus fragiles et sont pauvrement représentées dans le réseau des aires protégées de Madagascar. Pourtant, ce type de forêt regroupe un peu plus d'un millier d'espèces endémiques qui font la richesse floristique de l'île. La forêt littorale d'Agnalazaha, située à 50 Km au sud de Farafangana, ne fait pas exception à cette fragilité, avec d'importantes pressions anthropiques constatées, particulièrement entre 1997 et 2002. En outre, 3 espèces cibles rentrant dans la liste IUCN sont présentes sur le site étudié: Asteropeia micraster, Dalbergia baroni et Dalbergia chapelieri . Des études sur la distribution et sur l'écologie de ces espèces ont ainsi été effectuées sur le site d'Agnalazaha, afin d'évaluer les degrés des menaces auxquelles ces plantes sont confrontées, et de suggérer les mesures nécessaires à leur conservation dans la forêt d'Agnalazaha. Un travail de bibliographie, des observations sur terrain, une enquête socioéconomique et un inventaire de la forêt d'Agnalazaha ont été réalisés dans le but d'obtenir des données précises sur les espèces cibles. -
Caryophyllales: a Key Group for Understanding Wood
Botanical Journal of the Linnean Society, 2010, 164, 342–393. With 21 figures Caryophyllales: a key group for understanding wood anatomy character states and their evolutionboj_1095 342..393 SHERWIN CARLQUIST FLS* Santa Barbara Botanic Garden, 1212 Mission Canyon Road, Santa Barbara, CA 93110, USA Received 13 May 2010; accepted for publication 28 September 2010 Definitions of character states in woods are softer than generally assumed, and more complex for workers to interpret. Only by a constant effort to transcend the limitations of glossaries can a more than partial understanding of wood anatomy and its evolution be achieved. The need for such an effort is most evident in a major group with sufficient wood diversity to demonstrate numerous problems in wood anatomical features. Caryophyllales s.l., with approximately 12 000 species, are such a group. Paradoxically, Caryophyllales offer many more interpretive problems than other ‘typically woody’ eudicot clades of comparable size: a wider range of wood structural patterns is represented in the order. An account of character expression diversity is presented for major wood characters of Caryophyllales. These characters include successive cambia (more extensively represented in Caryophyllales than elsewhere in angiosperms); vessel element perforation plates (non-bordered and bordered, with and without constrictions); lateral wall pitting of vessels (notably pseudoscalariform patterns); vesturing and sculpturing on vessel walls; grouping of vessels; nature of tracheids and fibre-tracheids, storying in libriform fibres, types of axial parenchyma, ray anatomy and shifts in ray ontogeny; juvenilism in rays; raylessness; occurrence of idioblasts; occurrence of a new cell type (ancistrocladan cells); correlations of raylessness with scattered bundle occurrence and other anatomical discoveries newly described and/or understood through the use of scanning electron microscopy and light microscopy. -
Rethinking Phylogenetics Using Caryophyllales (Angiosperms), Matk Gene and Trnk Intron As Experimental Platform
Rethinking phylogenetics using Caryophyllales (angiosperms), matK gene and trnK intron as experimental platform Sunny Sheliese Crawley Dissertation submitted to the faculty of the Virginia Polytechnic Institute and State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy In Biological Sciences Khidir W. Hilu Eric P. Beers Carla V. Finkielstein Jill C. Sible December 2, 2011 Blacksburg, Virginia Keywords: (phylogeny, missing data, caryophyllids, trnK intron, matK, RNA editing, gnetophytes) Copyright 2011, Sunny Sheliese Crawley Rethinking phylogenetics using Caryophyllales (angiosperms), matK gene and trnK intron as experimental platform Sunny Sheliese Crawley ABSTRACT The recent call to reconstruct a detailed picture of the tree of life for all organisms has forever changed the field of molecular phylogenetics. Sequencing technology has improved to the point that scientists can now routinely sequence complete plastid/mitochondrial genomes and thus, vast amounts of data can be used to reconstruct phylogenies. These data are accumulating in DNA sequence repositories, such as GenBank, where everyone can benefit from the vast growth of information. The trend of generating genomic-region rich datasets has far outpaced the expasion of datasets by sampling a broader array of taxa. We show here that expanding a dataset both by increasing genomic regions and species sampled using GenBank data, despite the inherent missing DNA that comes with GenBank data, can provide a robust phylogeny for the plant order Caryophyllales (angiosperms). We also investigate the utility of trnK intron in phylogeny reconstruction at relativley deep evolutionary history (the caryophyllid order) by comparing it with rapidly evolving matK. We show that trnK intron is comparable to matK in terms of the proportion of variable sites, parsimony informative sites, the distribution of those sites among rate classes, and phylogenetic informativness across the history of the order. -
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Vol. 11(9), pp. 286-305, October-December 2019 DOI: 10.5897/IJBC2019.1323 Article Number: 8A5F12862417 ISSN 2141-243X Copyright © 2019 International Journal of Biodiversity and Author(s) retain the copyright of this article http://www.academicjournals.org/IJBC Conservation Full Length Research Paper Species-based approach to biodiversity conservation: An innovative step in Madagascar Rindra Ramananjatovo1*, Lolona Ramamonjisoa1, Gabrielle Rajoelison1, Joelisoa Ratsirarson1 and Harison Rabarison2 1Ecole Supérieure des Sciences Agronomiques, Université d’Antananarivo, Madagascar. 2Mention Ecologie et Biologie Végétales, Faculté des Sciences, Université d’Antananarivo, Madagascar. Received 6 July, 2019; Accepted 30 October, 2019 Known for its diversity and high endemicity, half of Madagascar's floral richness is sheltered in the Island's eastern evergreen dense rainforest; including key, threatened and socio-economically valuable species. The vulnerability of such habitat, combined with overexploitation of timber, threatens the livelihoods of forest communities and conservation of biological diversity. Up till date, the main actions regarding Madagascar’s biodiversity are leading at the ecosystem level through protected area systems, without necessarily ensuring real conservation of all key species. These are rarely considered as a criterion for effective protected area management. Although decisions on long-term conservation and genetic improvement require detailed scientific and economic knowledge of species, very limited data are available. This research study sets out to promote the development of scientific knowledge of six key endemic species belonging to lowland rainforest ecosystems, to propose a variant of models for the conservation and sustainable use of their genetic resources. The research was conducted using several methods including ecological studies of the habitats of these key species, demographic analysis, and monitoring of their biological and phenological behaviors. -
Mistletoes and Thionins
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 49 Mistletoes and Thionins as Selection Models in Natural Products Drug Discovery SONNY LARSSON ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6192 UPPSALA ISBN 978-91-554-6824-8 2007 urn:nbn:se:uu:diva-7705 ! "!!# $!! % & % % ' ( % ' )* + , - &* . /* "!!#* + * / 0 ' & * 1 * 2* 34 * * 5/0 2#672744736"76* + % & % , % 8 * 5 8 9 ,& & % % & & * 1 8 % % * + % * : & % ; , % & & % 7 * % % & % , ; %% * 1 %% % / , * + % & % 01 ; , & % : & & 6/ "3/ 01 ; , / * 1 & & , ; % % / * + % 9 % 9 9 , % < * + % % ' + , & (/ ) / , , % & 7 7 2 #<+* & . , & % * 5 , 9 , % % ; 9 & , & & * ! "# & & / $ %" $ $ & '()$ $ *+(',-. $ !" = / . "!!# 5//0 34732" 5/0 2#672744736"76 $ $$$ 7##!4 ( $>> *9*> ? @ $ $$$ 7##!4) ...his task had never been to undo what he had done, but to finish what he had begun. A Wizard of Earthsea Ursula K. Le Guin List of Papers This thesis is based on the following papers, referred to in the text by their roman numerals: -
Angiosperm Phylogeny Based on 18S/26S Rdna Sequence Data: Constructing a Large Data Set Using Next-Generation Sequence Data Author(S): Vitor H
Angiosperm Phylogeny Based on 18S/26S rDNA Sequence Data: Constructing a Large Data Set Using Next-Generation Sequence Data Author(s): Vitor H. Maia, Matthew A. Gitzendanner, Pamela S. Soltis, Gane Ka-Shu Wong, and Douglas E. Soltis Source: International Journal of Plant Sciences, Vol. 175, No. 6 (July/August 2014), pp. 613- 650 Published by: The University of Chicago Press Stable URL: http://www.jstor.org/stable/10.1086/676675 . Accessed: 02/11/2015 13:34 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp . JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The University of Chicago Press is collaborating with JSTOR to digitize, preserve and extend access to International Journal of Plant Sciences. http://www.jstor.org This content downloaded from 23.235.32.0 on Mon, 2 Nov 2015 13:34:26 PM All use subject to JSTOR Terms and Conditions Int. J. Plant Sci. 175(6):613–650. 2014. ᭧ 2014 by The University of Chicago. All rights reserved. 1058-5893/2014/17506-0001$15.00 DOI: 10.1086/676675 ANGIOSPERM PHYLOGENY BASED ON 18S/26S rDNA SEQUENCE DATA: CONSTRUCTING A LARGE DATA SET USING NEXT-GENERATION SEQUENCE DATA Vitor H. Maia,*,†,‡ Matthew A. -
International Journal of Plant Sciences, Vol
Phylogeny of Amaranthaceae and Chenopodiaceae and the Evolution of C₄ Photosynthesis Author(s): G. Kadereit, T. Borsch, K. Weising, H. Freitag Source: International Journal of Plant Sciences, Vol. 164, No. 6 (Nov., 2003), pp. 959-986 Published by: The University of Chicago Press Stable URL: http://www.jstor.org/stable/3691834 Accessed: 20/05/2010 19:46 Your use of the JSTOR archive indicates your acceptance of JSTOR's Terms and Conditions of Use, available at http://www.jstor.org/page/info/about/policies/terms.jsp. JSTOR's Terms and Conditions of Use provides, in part, that unless you have obtained prior permission, you may not download an entire issue of a journal or multiple copies of articles, and you may use content in the JSTOR archive only for your personal, non-commercial use. Please contact the publisher regarding any further use of this work. Publisher contact information may be obtained at http://www.jstor.org/action/showPublisher?publisherCode=ucpress. Each copy of any part of a JSTOR transmission must contain the same copyright notice that appears on the screen or printed page of such transmission. JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. The University of Chicago Press is collaborating with JSTOR to digitize, preserve and extend access to International Journal of Plant Sciences. -
A Survey of the Orchid Diversity (Orchidaceae) in Sainte Luce, Petriky, and Mandena (Southeast Madagascar) Anne Kathleen Johnson SIT Study Abroad
SIT Graduate Institute/SIT Study Abroad SIT Digital Collections Independent Study Project (ISP) Collection SIT Study Abroad Spring 2012 A Survey of the Orchid Diversity (Orchidaceae) in Sainte Luce, Petriky, and Mandena (Southeast Madagascar) Anne Kathleen Johnson SIT Study Abroad Follow this and additional works at: https://digitalcollections.sit.edu/isp_collection Part of the Natural Resources and Conservation Commons Recommended Citation Johnson, Anne Kathleen, "A Survey of the Orchid Diversity (Orchidaceae) in Sainte Luce, Petriky, and Mandena (Southeast Madagascar)" (2012). Independent Study Project (ISP) Collection. 1264. https://digitalcollections.sit.edu/isp_collection/1264 This Unpublished Paper is brought to you for free and open access by the SIT Study Abroad at SIT Digital Collections. It has been accepted for inclusion in Independent Study Project (ISP) Collection by an authorized administrator of SIT Digital Collections. For more information, please contact [email protected]. A Survey of the Orchid Diversity (Orchidaceae) in Sainte Luce, Petriky, and Mandena (Southeast Madagascar) Anne Kathleen Johnson Advisor: David Rabehevitra Academic Director: Jim Hansen Semester: Spring, 2012 1 Acknowledgments I would especially like to thank David Rabehevitra, the QMM botanist who served as my advisor and helped me tremendously throughout this project. I would also like to thank Norlin Odoris, Marco Raherison, Roger Ramison, Give Sambo, and all others who helped me navigate and record information in the field. My host family deserves much appreciation for providing me with food, shelter, and support in between data collection. I thank my biological family at home in the United States for providing me with support, despite being a continent and an ocean away. -
Madagascar Trees
The Red List of Trees of Madagascar Emily Beech, Malin Rivers, Marina Rabarimanarivo, Noro Ravololomanana, Nadiah Manjato, Faranirina Lantoarisoa, Sylvie Andriambololonera, Brigitte Ramandimbisoa, Hélène Ralimanana, Solofo Eric Rakotoarisoa, Henintsoa Razanajatovo, Velosoa Razafiniary, Andotiana Andriamanohera, Vonona Randrianasolo, Franck Rakotonasolo, Andry Rakotoarisoa, Nomentsoa Randriamamonjy, Landy Rajaovelona, Nantenaina Rakotomalala, Tianjanahary Randriamboavonjy, Mamy Tiana Rajaonah, David Rabehevitra, Aro Vonjy Ramarosandratana, Mijoro Rakotoarinivo, Bako Harisoa Ravaomanalina and Vololoniaina Jeannoda Published by Botanic Gardens Conservation International Descanso House, 199 Kew Road, Richmond, Surrey, TW9 3BW, UK. © 2021 Botanic Gardens Conservation International ISBN-10: 1-905164-77-7 ISBN-13: 978-1-905164-77-6 Reproduction of any part of the publication for educational, conservation and other non-profit purposes is authorized without prior permission from the copyright holder, provided that the source is fully acknowledged. Reproduction for resale or other commercial purposes is prohibited without prior written permission from the copyright holder. Recommended citation: Beech, E., Rivers, M., Rabarimanarivo, M., Ravololomanana, N., Manjato, N., Lantoarisoa, F., Andriambololonera, S., Ramandimbisoa, B., Ralimanana, H., Rakotoarisoa, S., Razanajatovo , H., Razafiniary, V., Andriamanohera, A., Randrianasolo, V., Rakotonasolo, F., Rakotoarisoa, A., Randriamamonjy, N., Rajaovelona, L., Rakotomalala, N., Randriamboavonjy, T., -
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Endemie families of Madagascar. IV. A synoptic revision of Asteropeia (Asteropeiaceae) George E. SCHATZ Missouri Botanical Garden, P.O. Box 299, St. Louis, MO, 63166-0299, U.S.A. [email protected] Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AE, U.K. Porter P. LOWRY II Missouri Botanical Garden, P.O. Box 299, St. Louis, MO, 63166-0299, U.S.A. [email protected] Laboratoire de Phanérogamie, Muséum national d'Histoire naturelle, 16 rue Buffon, 75005 Paris, France. [email protected] Anne-Elizabeth WOLF Laboratoire de Phanérogamie, Muséum national d'Histoire naturelle, 16 rue Buffon, 75005 Paris, France. [email protected] ABSTRACT As part of an assessment of the conservation status of the vascular plant fami lies endemic to Madagascar and the Comoro Islands, a synoptic revision is presented of Asteropeia (Asteropeiaceae). The genus was traditionally placed in Theaceae, but recent data from wood anatomy and chloroplast gene sequences indicate a probable sister relationship with another Malagasy en demic, Physena (the sole member of the family Physenaceae), the two taxa together forming a basal branch within Caryophyllales. Analysis of available KEYWORDS herbarium material permits the recognition of eight species, two of which are Asteropeiaceae, described as new (A. labatii and A. mcphersonii) and one is elevated from the Madagascar' rank of variety (A. matrambody); three illegitimate varieties are placed in endemism. synonymy. A key to the species is provided in English and French. sér. 3 • 1999 • 21 (2): 255-268 255 Schatz G.E., Lowry II P.P. & Wolf A.-E. RESUME Familles endémiques de Madagascar. IV. Révision synoptique du genre Asteropeia (Asteropeiaceae). -
Madagascar Trees
The Red List of Trees of Madagascar Emily Beech, Malin Rivers, Marina Rabarimanarivo, Noro Ravololomanana, Nadiah Manjato, Faranirina Lantoarisoa, Sylvie Andriambololonera, Brigitte Ramandimbisoa, Hélène Ralimanana, Solofo Eric Rakotoarisoa, Henintsoa Razanajatovo, Velosoa Razafiniary, Andotiana Andriamanohera, Vonona Randrianasolo, Franck Rakotonasolo, Andry Rakotoarisoa, Nomentsoa Randriamamonjy, Landy Rajaovelona, Nantenaina Rakotomalala, Tianjanahary Randriamboavonjy, Mamy Tiana Rajaonah, David Rabehevitra, Aro Vonjy Ramarosandratana, Mijoro Rakotoarinivo, Bako Harisoa Ravaomanalina and Vololoniaina Jeannoda Published by Botanic Gardens Conservation International Descanso House, 199 Kew Road, Richmond, Surrey, TW9 3BW, UK. © 2021 Botanic Gardens Conservation International ISBN-10: 1-905164-77-7 ISBN-13: 978-1-905164-77-6 Reproduction of any part of the publication for educational, conservation and other non-profit purposes is authorized without prior permission from the copyright holder, provided that the source is fully acknowledged. Reproduction for resale or other commercial purposes is prohibited without prior written permission from the copyright holder. Recommended citation: Beech, E., Rivers, M., Rabarimanarivo, M., Ravololomanana, N., Manjato, N., Lantoarisoa, F., Andriambololonera, S., Ramandimbisoa, B., Ralimanana, H., Rakotoarisoa, S., Razanajatovo , H., Razafiniary, V., Andriamanohera, A., Randrianasolo, V., Rakotonasolo, F., Rakotoarisoa, A., Randriamamonjy, N., Rajaovelona, L., Rakotomalala, N., Randriamboavonjy, T.,