Fybsc Animal Diversity-I
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New Zealand's Genetic Diversity
1.13 NEW ZEALAND’S GENETIC DIVERSITY NEW ZEALAND’S GENETIC DIVERSITY Dennis P. Gordon National Institute of Water and Atmospheric Research, Private Bag 14901, Kilbirnie, Wellington 6022, New Zealand ABSTRACT: The known genetic diversity represented by the New Zealand biota is reviewed and summarised, largely based on a recently published New Zealand inventory of biodiversity. All kingdoms and eukaryote phyla are covered, updated to refl ect the latest phylogenetic view of Eukaryota. The total known biota comprises a nominal 57 406 species (c. 48 640 described). Subtraction of the 4889 naturalised-alien species gives a biota of 52 517 native species. A minimum (the status of a number of the unnamed species is uncertain) of 27 380 (52%) of these species are endemic (cf. 26% for Fungi, 38% for all marine species, 46% for marine Animalia, 68% for all Animalia, 78% for vascular plants and 91% for terrestrial Animalia). In passing, examples are given both of the roles of the major taxa in providing ecosystem services and of the use of genetic resources in the New Zealand economy. Key words: Animalia, Chromista, freshwater, Fungi, genetic diversity, marine, New Zealand, Prokaryota, Protozoa, terrestrial. INTRODUCTION Article 10b of the CBD calls for signatories to ‘Adopt The original brief for this chapter was to review New Zealand’s measures relating to the use of biological resources [i.e. genetic genetic resources. The OECD defi nition of genetic resources resources] to avoid or minimize adverse impacts on biological is ‘genetic material of plants, animals or micro-organisms of diversity [e.g. genetic diversity]’ (my parentheses). -
An Ordovician Lobopodian from the Soom Shale Lagerstätte, South Africa
[Palaeontology, Vol. 52, Part 3, 2009, pp. 561–567] AN ORDOVICIAN LOBOPODIAN FROM THE SOOM SHALE LAGERSTA¨ TTE, SOUTH AFRICA by ROWAN J. WHITTLE*,à, SARAH E. GABBOTT*, RICHARD J. ALDRIDGE* and JOHANNES THERON *Department of Geology, University of Leicester, Leicester LE1 7RH, UK; e-mails: [email protected]; [email protected] Department of Geology, University of Stellenbosch, Private Bag XI, Stellenbosch 7602, South Africa; e-mail: [email protected] àPresent address: British Antarctic Survey, Madingley Road, Cambridge, CB3 0ET, UK; e-mail: [email protected] Typescript received 18 July 2008; accepted in revised form 27 January 2009 Abstract: The first lobopodian known from the Ordovician and Carboniferous. The new fossil preserves an annulated is described from the Soom Shale Lagersta¨tte, South Africa. trunk, lobopods with clear annulations, and curved claws. It The organism shows features homologous to Palaeozoic mar- represents a rare record of a benthic organism from the ine lobopodians described from the Middle Cambrian Bur- Soom Shale, and demonstrates intermittent water oxygena- gess Shale, the Lower Cambrian Chengjiang biota, the Lower tion during the deposition of the unit. Cambrian Sirius Passet Lagersta¨tte and the Lower Cambrian of the Baltic. The discovery provides a link between marine Key words: Lagersta¨tte, lobopodian, Ordovician, Soom Cambrian lobopodians and younger forms from the Silurian Shale. Cambrian lobopodians are a diverse group showing a in an intracratonic basin with water depths of approxi- great variety of body shape, size and ornamentation. mately 100 m (Gabbott 1999). Dominantly quiet water However, they share a segmented onychophoran-like conditions are indicated by a lack of flow-induced sedi- body, paired soft-skinned annulated lobopods, and in mentary structures and the taphonomy of the fossils. -
The Comparative Embryology of Sponges Alexander V
The Comparative Embryology of Sponges Alexander V. Ereskovsky The Comparative Embryology of Sponges Alexander V. Ereskovsky Department of Embryology Biological Faculty Saint-Petersburg State University Saint-Petersburg Russia [email protected] Originally published in Russian by Saint-Petersburg University Press ISBN 978-90-481-8574-0 e-ISBN 978-90-481-8575-7 DOI 10.1007/978-90-481-8575-7 Springer Dordrecht Heidelberg London New York Library of Congress Control Number: 2010922450 © Springer Science+Business Media B.V. 2010 No part of this work may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, microfilming, recording or otherwise, without written permission from the Publisher, with the exception of any material supplied specifically for the purpose of being entered and executed on a computer system, for exclusive use by the purchaser of the work. Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Preface It is generally assumed that sponges (phylum Porifera) are the most basal metazoans (Kobayashi et al. 1993; Li et al. 1998; Mehl et al. 1998; Kim et al. 1999; Philippe et al. 2009). In this connection sponges are of a great interest for EvoDevo biolo- gists. None of the problems of early evolution of multicellular animals and recon- struction of a natural system of their main phylogenetic clades can be discussed without considering the sponges. These animals possess the extremely low level of tissues organization, and demonstrate extremely low level of processes of gameto- genesis, embryogenesis, and metamorphosis. They show also various ways of advancement of these basic mechanisms that allow us to understand processes of establishment of the latter in the early Metazoan evolution. -
New Data on Spermatogenic Cyst Formation and Cellular Composition of the Testis in a Marine Gastropod, Littorina Saxatilis
International Journal of Molecular Sciences Article New Data on Spermatogenic Cyst Formation and Cellular Composition of the Testis in a Marine Gastropod, Littorina saxatilis Sergei Iu. Demin 1,*, Dmitry S. Bogolyubov 1,* , Andrey I. Granovitch 2 and Natalia A. Mikhailova 1,2 1 Institute of Cytology of the Russian Academy of Sciences, 4 Tikhoretsky Ave., 194064 St. Petersburg, Russia; [email protected] 2 Department of Invertebrate Zoology, St. Petersburg State University, 7/9 Universitetskaya Emb., 199034 St. Petersburg, Russia; [email protected] * Correspondence: [email protected] (S.I.D.); [email protected] (D.S.B.) Received: 29 April 2020; Accepted: 25 May 2020; Published: 27 May 2020 Abstract: Knowledge of the testis structure is important for gastropod taxonomy and phylogeny, particularly for the comparative analysis of sympatric Littorina species. Observing fresh tissue and squashing fixed tissue with gradually increasing pressure, we have recently described a peculiar type of cystic spermatogenesis, rare in mollusks. It has not been documented in most mollusks until now. The testis of adult males consists of numerous lobules filled with multicellular cysts containing germline cells at different stages of differentiation. Each cyst is formed by one cyst cell of somatic origin. Here, we provide evidence for the existence of two ways of cyst formation in Littorina saxatilis. One of them begins with a goniablast cyst formation; it somewhat resembles cyst formation in Drosophila testes. The second way begins with capture of a free spermatogonium by the polyploid cyst cell which is capable to move along the gonad tissues. This way of cyst formation has not been described previously. -
Hallucigenia's Onychophoran-Like Claws
LETTER doi:10.1038/nature13576 Hallucigenia’s onychophoran-like claws and the case for Tactopoda Martin R. Smith1 & Javier Ortega-Herna´ndez1 The Palaeozoic form-taxon Lobopodia encompasses a diverse range of Onychophorans lack armature sclerites, but possess two types of ap- soft-bodied‘leggedworms’ known from exceptionalfossil deposits1–9. pendicular sclerite: paired terminal claws in the walking legs, and den- Although lobopodians occupy a deep phylogenetic position within ticulate jaws within the mouth cavity9,23.AsinH. sparsa, claws in E. Panarthropoda, a shortage of derived characters obscures their evo- kanangrensis exhibit a broad base that narrows to a smooth conical point lutionary relationships with extant phyla (Onychophora, Tardigrada (Fig. 1e–h). Each terminal clawsubtends anangle of130u and comprises and Euarthropoda)2,3,5,10–15. Here we describe a complex feature in two to three constituent elements (Fig. 1e–h). Each smaller element pre- the terminal claws of the mid-Cambrian lobopodian Hallucigenia cisely fills the basal fossa of its container, from which it can be extracted sparsa—their construction from a stack of constituent elements— with careful manipulation (Fig. 1e, g, h and Extended Data Fig. 3a–g). and demonstrate that equivalent elements make up the jaws and claws Each constituent element has a similar morphology and surface orna- of extant Onychophora. A cladistic analysis, informed by develop- ment (Extended Data Fig. 3a–d), even in an abnormal claw where mental data on panarthropod head segmentation, indicates that the element tips are flat instead of pointed (Extended Data Fig. 3h). The stacked sclerite components in these two taxa are homologous— proximal bases of the innermost constituent elements are associated with resolving hallucigeniid lobopodians as stem-group onychophorans. -
Mollusksmollusks the Paleontological Society Http:\\Paleosoc.Org
MollusksMollusks The Paleontological Society http:\\paleosoc.org Mollusks The concept Mollusca brings together a great deal of cept Mollusca is unified by anatomical similarities, by information about animals that at first glance appear to be embryological similarities, and by evidence from fossils radically different from one another—snails, slugs, of the evolutionary history of the species placed within mussels, clams, oysters, octopuses, squids, and others. the phylum; all this information indicates a common The diversity of the phylum is shown by at least eight ancestry for the groups placed in the phylum. known classes (cover). Estimates of the number of species alive today range from 50,000 to 130,000. Most Most mollusks are free-living multicellular animals that of the shells found on the beaches of the modem world have a multilayered calcareous shell or conch on their belong to mollusks and mollusks are probably the most backs. This exoskeleton provides support for the soft abundant invertebrate animals in modern oceans. organs including a muscular foot and the organs of digestion, respiration, excretion, reproduction, and others. Living mollusks range in size from microscopic snails Around all of the soft parts is a space called the mantle and clams to almost 60 foot long (18 meters) squids. cavity, which is open to the outside. The mantle cavity is They live in most marine and freshwater environments, a passageway for incoming feeding and respiratory and some snails and slugs live on land. In the sea, mol- currents, and an exit for the discharge of wastes. The lusks range from the intertidal zone to the deepest ocean outer wall of the mantle cavity is a thin flap of tissue basins and they may be bottom-dwelling, swimming, or called the mantle, which secretes the shell. -
Annual Meeting 2011
The Palaeontological Association 55th Annual Meeting 17th–20th December 2011 Plymouth University PROGRAMME and ABSTRACTS Palaeontological Association 2 ANNUAL MEETING ANNUAL MEETING Palaeontological Association 1 The Palaeontological Association 55th Annual Meeting 17th–20th December 2011 School of Geography, Earth and Environmental Sciences, Plymouth University The programme and abstracts for the 55th Annual Meeting of the Palaeontological Association are outlined after the following summary of the meeting. Venue The meeting will take place on the campus of Plymouth University. Directions to the University and a campus map can be found at <http://www.plymouth.ac.uk/location>. The opening symposium and the main oral sessions will be held in the Sherwell Centre, located on North Hill, on the east side of campus. Accommodation Delegates need to make their own arrangements for accommodation. Plymouth has a large number of hotels, guesthouses and hostels at a variety of prices, most of which are within ~1km of the University campus (hotels with PL1 or PL4 postcodes are closest). More information on these can be found through the usual channels, and a useful starting point is the website <http://www.visitplymouth.co.uk/site/where-to-stay>. In addition, we have organised discount rates at the Jury’s Inn, Exeter Street, which is located ~500m from the conference venue. A maximum of 100 rooms have been reserved, and will be allocated on a first-come-first-served basis. Further information can be found on the Association’s website. Travel Transport into Plymouth can be achieved via a variety of means. Travel by train from London Paddington to Plymouth takes between three and four hours depending on the time of day and the number of stops. -
The Early History of the Metazoa—A Paleontologist's Viewpoint
ISSN 20790864, Biology Bulletin Reviews, 2015, Vol. 5, No. 5, pp. 415–461. © Pleiades Publishing, Ltd., 2015. Original Russian Text © A.Yu. Zhuravlev, 2014, published in Zhurnal Obshchei Biologii, 2014, Vol. 75, No. 6, pp. 411–465. The Early History of the Metazoa—a Paleontologist’s Viewpoint A. Yu. Zhuravlev Geological Institute, Russian Academy of Sciences, per. Pyzhevsky 7, Moscow, 7119017 Russia email: [email protected] Received January 21, 2014 Abstract—Successful molecular biology, which led to the revision of fundamental views on the relationships and evolutionary pathways of major groups (“phyla”) of multicellular animals, has been much more appre ciated by paleontologists than by zoologists. This is not surprising, because it is the fossil record that provides evidence for the hypotheses of molecular biology. The fossil record suggests that the different “phyla” now united in the Ecdysozoa, which comprises arthropods, onychophorans, tardigrades, priapulids, and nemato morphs, include a number of transitional forms that became extinct in the early Palaeozoic. The morphology of these organisms agrees entirely with that of the hypothetical ancestral forms reconstructed based on onto genetic studies. No intermediates, even tentative ones, between arthropods and annelids are found in the fos sil record. The study of the earliest Deuterostomia, the only branch of the Bilateria agreed on by all biological disciplines, gives insight into their early evolutionary history, suggesting the existence of motile bilaterally symmetrical forms at the dawn of chordates, hemichordates, and echinoderms. Interpretation of the early history of the Lophotrochozoa is even more difficult because, in contrast to other bilaterians, their oldest fos sils are preserved only as mineralized skeletons. -
Developing Perspectives on Molluscan Shells, Part 1: Introduction and Molecular Biology
CHAPTER 1 DEVELOPING PERSPECTIVES ON MOLLUSCAN SHELLS, PART 1: INTRODUCTION AND MOLECULAR BIOLOGY KEVIN M. KOCOT1, CARMEL MCDOUGALL, and BERNARD M. DEGNAN 1Present Address: Department of Biological Sciences and Alabama Museum of Natural History, The University of Alabama, Tuscaloosa, AL 35487, USA; E-mail: [email protected] School of Biological Sciences, The University of Queensland, St. Lucia, Queensland 4072, Australia CONTENTS Abstract ........................................................................................................2 1.1 Introduction .........................................................................................2 1.2 Insights From Genomics, Transcriptomics, and Proteomics ............13 1.3 Novelty in Molluscan Biomineralization ..........................................21 1.4 Conclusions and Open Questions .....................................................24 Keywords ...................................................................................................27 References ..................................................................................................27 2 Physiology of Molluscs Volume 1: A Collection of Selected Reviews ABSTRACT Molluscs (snails, slugs, clams, squid, chitons, etc.) are renowned for their highly complex and robust shells. Shell formation involves the controlled deposition of calcium carbonate within a framework of macromolecules that are secreted by the outer epithelium of a specialized organ called the mantle. Molluscan shells display remarkable morphological -
Aplacophoran Mollusca in the Natural History Museum Berlin. an Annotated Catalogue of Thiele's Type Specimens, with a Brief
Mitt. Mus. Nat.kd. Berl., Zool. Reihe 81 (2005) 2, 145–166 / DOI 10.1002/mmnz.200510009 Aplacophoran Mollusca in the Natural History Museum Berlin. An annotated catalogue of Thiele’s type specimens, with a brief review of “Aplacophora” classification Matthias Glaubrecht*,1, Lothar Maitas1 & Luitfried v. Salvini-Plawen**,2 1 Department of Malacozoology, Museum of Natural History, Humboldt University, Invalidenstraße 43, D-10115 Berlin, Germany 2 Institut fu¨ r Zoologie, Universita¨t Wien, Althanstraße 14, A-1090 Vienna, Austria Received January 2005, accepted April 2005 Published online 08. 09. 2005 With 2 figures Key words: Systematization, cladistic analyses, Solenogastres (¼ Neomeniomorpha), Caudofoveata (¼ Chaetodermomorpha), Aculifera, Amphineura, Johannes Thiele, Ernst Vanho¨ ffen, First German South Polar Expedition, “Gauss”, “Valdivia”. Abstract Aplacophoran molluscs are a small, often neglected and still poorly known but phylogenetically important basal group, with taxa possessing morphological characters considered essential for the reconstruction of the basal Mollusca and their evolution. Currently, in most textbooks of zoology and major malacological treatise Solenogastres and Caudofoveata are viewed as con- stituting a monophyletic clade called Aplacophora Von Ihering, 1876, although evidence is available to the contrary, suggest- ing the latter to be a paraphyletic grade. Accordingly, the hitherto accepted “Aplacophora” may consist of two Recent, diphy- letic taxa, viz. Solenogastres Gegenbaur, 1878 (sensu Simroth, 1893) or Neomeniomorpha Pelseneer, 1906 (also called Ventroplicida Boettger, 1955) and Caudofoveata Boettger, 1955 or Chaetodermomorpha Pelseneer, 1906. The Museum of Natural History Berlin (formerly Zoological Museum Berlin, ZMB) houses rich type material essentially of Solenogastres on which to a substantial degree the preeminent German malacologist Johannes Thiele (1860–1935), working as curator in this collection from 1905 on, has based his respective systematic accounts of that time. -
Phylogeny of Hallucigenia
Phylogeny of Hallucigenia By Annette Hilton December 4th, 2014 Invertebrate Paleontology Cover artwork from: http://people.ds.cam.ac.uk/ms609/ 2 Abstract Hallucigenia is an extinct genus from the lower-middle Cambrian. A small worm-like organism with dorsal spines, Hallucigenia is rare in fossil history, and its identity and morphology have often been confounded. Since its original discovery in the Burgess Shale by Walcott, Hallucigenia has since become an iconic fossil. Its greater systematics and place in the phylogenetic tree is controversial and not completely understood. New evidence and the discovery of additional species of Hallucigenia have contributed much to the understanding of this genus and its broader relations in classification and evolutionary history. Introduction Hallucigenia is a genus that encompasses three known species that lived during the Cambrian period—Hallucigenia sparsa, Hallucigenia fortis, and Hallucigenia hongmeia (Ma et al., 2012). Hallucigenia’s taxonomy in figure 1. Kingdom Animalia Phylum Onychophora (Lobopodia) Class Xenusia Order Scleronychophora Genus Hallucigenia Figure 1. Taxonomy of Hallucigenia species. Collectively, all Hallucigenia specimens are rare, with a portion of specimens incomplete. The understanding of Hallucigenia and its life mode has been confounded since the 3 original discovery of H. sparsa, but subsequent species discoveries has shed light on some of its mysteries (Conway Morris, 1998). Even more information concerning Hallucigenia is currently being unearthed—its classification into the phylum Onychophora and wider relations to other invertebrate groups like Arthropoda and the poorly understood Lobopodian group (Campbell et al., 2011). Hallucigenia, an iconic fossil of the Burgess Shale, demonstrates the well-known diversity of the Cambrian period, its morphology providing increasing numbers of clues to its connection into the greater systematic system. -
Helenodora Inopinata (Carboniferous, Mazon Creek Lagerstätte) and the Onychophoran Stem Lineage Duncan J
Murdock et al. BMC Evolutionary Biology (2016) 16:19 DOI 10.1186/s12862-016-0582-7 RESEARCH ARTICLE Open Access The impact of taphonomic data on phylogenetic resolution: Helenodora inopinata (Carboniferous, Mazon Creek Lagerstätte) and the onychophoran stem lineage Duncan J. E. Murdock, Sarah E. Gabbott and Mark A. Purnell* Abstract Background: The origin of the body plan of modern velvet worms (Onychophora) lies in the extinct lobopodians of the Palaeozoic. Helenodora inopinata, from the Mazon Creek Lagerstätte of Illinois (Francis Creek Shale, Carbondale Formation, Middle Pennsylvanian), has been proposed as an intermediate between the “weird wonders” of the Cambrian seas and modern terrestrial predatory onychophorans. The type material of H. inopinata, however, leaves much of the crucial anatomy unknown. Results: Here we present a redescription of this taxon based on more complete material, including new details of the head and posterior portion of the trunk, informed by the results of experimental decay of extant onychophorans. H. inopinata is indeed best resolved as a stem-onychophoran, but lacks several key features of modern velvet worms including, crucially, those that would suggest a terrestrial mode of life. Conclusions: The presence of H. inopinata in the Carboniferous demonstrates the survival of a Cambrian marine morphotype, and a likely post-Carboniferous origin of crown-Onychophora. Our analysis also demonstrates that taphonomically informed tests of character interpretations have the potential to improve phylogenetic resolution. Keywords: Panarthropoda, Lobopodia, Onychophora, Mazon Creek, Taphonomy Background of unequivocal terrestrial onychophorans are known from Lobopodians are extinct worm-like animals characterised Cretaceous [5] and Eocene [6, 7] amber. Helenodora inopi- by their unsegmented lobopodous limbs.