Chapter 2 Literature Review
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New Records for the Turkish Freshwater Algal Flora
Turkish Journal of Water Science & Management Research Article ISSN: 2536 474X / e-ISSN: 2564-7334 Setting Measures for TacklingVolume: 5 Issue: Agricultural 2 Year: 2021 Diffuse Pollution of Küçük Menderes Basin ResearchKüçük Article Menderes Havzası’nda Tarımsal Kaynaklı Yayılı Kirlilikle New Records Mücadelefor the Turkish Tedbirlerinin Freshwater Belirlenmesi Algal Flora in Twenty Five River Basins of Turkey, Part IV: Ochrophyta Ayşegül Tanık1, Asude Hanedar*2, Emine Girgin3, Elçin Güneş2, Erdem Görgün1,3, Nusret Karakaya4, Gökçen Gökdereli5, Burhan Fuat Çankaya 5, Taner Kimence5, Yakup Karaaslan5 1Türkiye’dekiİstanbul Technical University25 Nehir (ITU), Havzasından Faculty of Civil Engineering, Türkiye DepartmentTatlı Su of Alg Environmental Florası İçin YeniEngineering, Kayıtlar, 34469, BölümMaslak-Istanbul/TURKEY IV: Ochrophyta [email protected] (0000-0002-0319-0298) 2 Namk Kemal University,1 Çorlu 2Faculty of Engineeri3 ng, Department of Environmental4 Engineering,5 Nilsun Demir , Burak Öterler , 59860Haşim Çorlu-Sömek Tekirda, Tuğbağ /TurkeyOngun Sevindik *, Elif Neyran Soylu , 6 6 7 1 8 [email protected] Karaaslan , Tolga (0000-0003-4 Çetin , Abuzer827-5954), Çelekli [email protected], Tolga Coşkun , Cüneyt (0000-0002-1457-1504) Nadir Solak , Faruk 3io EnvironmentalMaraşlioğlu Solutions,9, Murat Re şParlakitpaşa1 ,Mah., Merve Katar Koca Cd.1, Doğan Ar Teknokent Can Manavoğlu 1 2/5 D:2 12, 34469 1Ankara University, Faculty of Agriculture,Saryerİstanbul/Turkey Fisheries and Aquaculture Engineering, 06120, [email protected], -
Kenneth G. Karol the Lewis B
Kenneth G. Karol The Lewis B. and Dorothy Cullman Program for Molecular Systematics Studies The New York Botanical Garden Bronx, New York 10458-5126 telephone: (718) 817-8615 e-mail: [email protected] Education Ph.D., Plant Biology. 2004. University of Maryland, College Park, MD Bachelor of Science, Botany. 1992. University of Wisconsin, Madison, WI Professional Experience Assistant Curator. 2007-Present. Cullman Program, The New York Botanical Garden, Bronx, NY Doctoral Faculty. 2007-Present. City University of New York, Plant Sciences Ph.D. Subprogram, Lehman College, Bronx, NY Chair - Phycological Section, Botanical Society of America. 2006-Present. Postdoctoral Fellow. 2006-2007. National Institutes of Health - National Research Service Award, Genomics/Biology, University of Washington, Seattle, WA LBNA Guest Researcher. 2005-present. Department of Energy Joint Genome Institute, Walnut Creek, CA Appointment runs concurrently with ongoing genome projects. Research Associate (post-doc). 2004-2006. US National Science Foundation Tree of Life Program, Biology, University of Washington, Seattle, WA Graduate Student. 1998-2004. Cell Biology and Molecular Genetics, University of Maryland, College Park, MD Research Assistant. 1999-2003. US NSF PEET Program, University of Maryland, College Park, MD Graduate Admissions Committee. 2001 & 2002. Cell Biology and Molecular Genetics, University of Maryland, College Park, MD Executive Committee. 1999-2000. Green Plant Phylogeny Research Coordination Group Biological Research Technician. 1997-1998. Laboratory of Molecular Systematics, National Museum of Natural History, Smithsonian Institution, Washington, DC Contract Researcher. 1997. Laboratory of Molecular Systematics, National Museum of Natural History, Smithsonian Institution, Smithsonian Institution, Washington, DC Research Technician. 1993-1996. Biological Sciences, DePaul University, Chicago, IL Visiting Scientist. -
Gêneros Closterium Nitzsh Ex Ralfs E Cosmarium Corda Ex Ralfs Em Dois Lagos Artificiais Urbanos No Município De Ituiutaba, Mg
GÊNEROS CLOSTERIUM NITZSH EX RALFS E COSMARIUM CORDA EX RALFS EM DOIS LAGOS ARTIFICIAIS URBANOS NO MUNICÍPIO DE ITUIUTABA, MG LUCIANE MARIA NOGUEIRA Universidade Federal de Uberlândia | Brasil [email protected] LUCAS MATHEUS DA ROCHA Universidade Federal de Uberlândia | Brasil [email protected] RESUMO: O objetivo deste trabalho foi de obter conhecimento dos táxons de Closterium Nitzsh ex Ralfs e Cosmarium Corda ex Ralfs em dois lagos artificiais, localizado no município de Ituiutaba, MG. As coletas foram feitas mensalmente, durante seis meses e foram obtidas através do auxílio da rede de plâncton 20µm e a retirada de amostras em diferentes tipos de substratos submersos na região litorânea dos lagos. Após, foram depositadas em frascos plásticos e armazenadas sobrefrigeração. Foram identificadas quatro espécies para o gênero Closterium com destaque para a espécie Closterium moniliferum (Bory) Ehrenberg ex Ralfs (Bory); e dez espécies identificadas para o gênero Cosmarium com ênfase na espécie Cosmarium denticulatum Borge, Bih. A natureza do substrato foi preferencialmente epifítica, associado à macrófita aquática Eichhornia spp. Este levantamento taxonômico contribui para ampliação do conhecimento quanto à diversidade dos gêneros estudados para a região do Triângulo Mineiro. Palavras-chaves:microalgas; epifíticas; taxonomia; Triângulo Mineiro. THE GENERA CLOSTERIUM NITZSH RALFS EX AND EX RALFS AND COSMARIUM CORDA IN TWO URBAN ARTIFICIAL LAKES IN ITUIUTABA MUNICIPALITY, MG ABSTRACT: The aim of this study was to increase knowledge of the Closterium Nitzsh ex Ralfs and Cosmarium Corda ex Ralfs taxa in two artificial lakes, located in the city of Ituiutaba, MG. The collections were made monthly for six months and were obtained through the help of plankton net 20μm and sampling of different types of substrates immersed in the shore region of the lakes. -
ABSTRACT BISHOP, WEST MICHAEL. a Risk
ABSTRACT BISHOP, WEST MICHAEL. A Risk-based Decision Information System for Selecting an Algal Management Program. (Under the direction of Dr. Robert J. Richardson). Freshwater resources are a vital component needed to support numerous human activities. Climate change, water use dynamics, and eutrophication have synergistically promoted nuisance and noxious algal blooms throughout the world. The increasing distribution, duration, and intensity of algal blooms has created unprecedented concerns over safety and usability of freshwater. Some of the largest blooms ever documented have occurred in the recent past. This dissertation is designed to provide a framework to assist in 1) understanding risks associated with nuisance algal infestations and 2) comparatively assessing the efficacy, costs, and collateral risks of different management approaches. The management decision framework consists of characterizing dimensions of the problem, identifying management objectives, and applying research to create a strategic management approach that incorporates risks of no action as well as risks associated with different management strategies. By considering information from the research chapters included herein, an accurate assessment of risks can be conducted in terms of the effectiveness and ecological integrity of management approaches. This research should be used to make informed decisions regarding the choice to manage nuisance algae and the selection of an appropriate management approach. © Copyright 2016 West Michael Bishop All Rights Reserved A Risk-based Decision Information System for Selecting an Algal Management Program by West Michael Bishop A dissertation submitted to the Graduate Faculty of North Carolina State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy Crop Science Raleigh, North Carolina 2016 APPROVED BY: _______________________________ _______________________________ Dr. -
Algal Flora of Korea
Algal Flora of Korea Algal Flora Algal Flora of Korea Volume 6, Number 1 Charophyta: Conjugatophyceae (Desmids I): Zygnematales: Mesotaeniaceae, Desmidiales: Gonatozygaceae, Peniaceae, Closteriaceae, Desmidiaceae Freshwater Green Algae Vol. 6, Vol. No. 1 Freshwater Green Algae Green Freshwater Flora and Fauna of Korea National Institute of Biological Resources Ministry of Environment National Institute of Biological Resources NIBR Ministry of Environment ISBN 978-89-97462-60-5 Russia CB Chungcheongbuk-do CN Chungcheongnam-do HB GB Gyeongsangbuk-do China GG Gyeonggi-do YG GN Gyeongsangnam-do GW Gangwon-do HB Hamgyeongbuk-do JG HN Hamgyeongnam-do HWB Hwanghaebuk-do HN HWN Hwanghaenam-do PB JB Jeollabuk-do JG Jagang-do JJ Jeju-do JN Jeollanam-do PN PB Pyeonganbuk-do PN Pyeongannam-do YG Yanggang-do HWB HWN GW East Sea GG GB (Ulleung-do) Yellow Sea CB CN GB JB GN JN JJ South Sea Algal Flora of Korea Volume 6, Number 1 Charophyta: Conjugatophyceae (Desmids I): Zygnematales: Mesotaeniaceae, Desmidiales: Gonatozygaceae, Peniaceae, Closteriaceae, Desmidiaceae Freshwater Green Algae 2012 National Institute of Biological Resources Ministry of Environment Algal Flora of Korea Volume 6, Number 1 Charophyta: Conjugatophyceae (Desmids I): Zygnematales: Mesotaeniaceae, Desmidiales: Gonatozygaceae, Peniaceae, Closteriaceae, Desmidiaceae Freshwater Green Algae Han Soon Kim Kyungpook National University Copyright ⓒ 2012 by the National Institute of Biological Resources Published by the National Institute of Biological Resources Environmental Research Complex, Hwangyeong-ro 42, Seo-gu Incheon, 404-708, Republic of Korea www.nibr.go.kr All rights reserved. No part of this book may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording, or otherwise, without the prior permission of the National Institute of Biological Resources. -
Viii.References
277 VIII. VIII. REFERENCES (文献) Abe ,J. ,Kubo ,T. ,Takagi ,Y. ,Saito ,T. ,Miura ,K. , 13 Aoki ,S. ,Ohara ,S. ,Ki mura ,K. ,Mizuguchi ,H. ,Fuse ,Y., Fukuzawa ,H. ,Matsuda , Y. 2004 Th e 回 nscriptional Yamada , E. 2008 Characterization of dissolved organic programofs 戸lchronous gametogenesis in Chlamydomonas matter released from Microcystis aeruginosa. Ana l. Sci. ,24 , reinhardtii. reinhardtii. Cu rr. Genet. ,46 ,302 ・315.S 回 in:2235 389-394. S住ain:l09 2 Abe ,T. ,Tsuzuki ,M. ,Kaplan ,A., Miyachi , S. 1987 14 Aoshima ,J., Kubota ,M. ,Nishimura ,T. ,Iwamur 九 T. 1984 Transport Transport and fixation of inorganic carbon during DNA polymerases of Chlorella. 11. Characterization to photosynthesis photosynthesis of Anabaena grown under ordinary air. distinguish the two enzymes. J. Biochem. ,96 ,461 -4 73. II.E 能 ct of sodium concen 回 tion during growth on the S位百 in:2170 induction induction of active 仕'anspo 託 system for IC. Plant Cell 15 15 Aoshima ,J. ,Nishimura ,T. ,Iw 釘 nura , T. 1982 DNA Physiol. ,28 ,671 ・677.S 住ain:2093 polymerases polymerases of Chlorella. I. Chloroplastic and nuclear DNA 3 Abe ,T. ,Tsuzuki ,M. ,Miyachi , S. 1987 Transport and polymerases in synchronized algal cells. Cell Struct. Funct. , fixation fixation of inorganic carbon during photosynthesis of 7,327 ・340.S 仕ain:2170 Anabaena grown under ordinary air. I. Active species of inorganic inorganic carbon utilized for photos 卯也esis. Plant Cell 16 Aoyama ,K. ,Uemura ,I., Miyake ,J. ,Asada , Y. 1997 Fermentative Fermentative metabolism to produce hydrogen g鎚 and Physio l., 28 ,273 ・28 1. Strain:2093 organic organic compounds in a cyanobacterium ,Spirulina 4 Abe ,T. -
Highlights of Recent Collections of Marine Algae from the Sultanate
ABSTRACTS 1 1 2 PALATABILITY AND CHEMICAL DEFENSES DINOFLAGELLATE GENOMICS: RESULTS OF MACROALGAE IN THE ANTARCTIC FROM AN EST APPROACH PENINSULA Bachvaroff, T. R.1,∗, Herman, E. M.2 & Amsler, C. D.1,∗, Amsler, M. O.1, McClintock, J. B.1, Delwiche, C. F.1 Iken, K. B.1, Hubbard, J. M.1 & Baker, W. J.2 1Cell Biology and Molecular Genetics, University of 1Department of Biology, University of Alabama at Maryland, College Park, MD 20742; 2Soybean Genomic Birmingham, Birmingham, AL 35294-1170; 2Department Improvement Laboratory, USDA/ARS, Beltsville, MD of Chemistry, University of South Florida, Tampa, FL 20705, USA 33620, USA Dinoflagellates are enigmatic protists with odd nu- We examined palatability of 37 species of nonen- clear features, interesting plastid gene arrangements crusting macroalgae from the Antarctic Peninsula. and a proclivity for endosymbiotic relationships. Rel- This represents approximately 30% of the entire atively little molecular work has been done on di- antarctic macroalgal flora and 75% of the 49 noflagellates, and only a handful of genes have been nonencrusting species we collected. Organic extracts characterized in these organisms. We have begun an from most species were also prepared and mixed Expressed Sequenced Tag (EST) project with the aim into artificial foods. We examined palatability using of collecting plastid targeted but nuclear encoded feeding bioassays with three common, macroalga- genes from peridinin-containing dinoflagellates. This consuming animals (an omnivorous antarctic rock- provides an opportunity to understand the integra- fish, Notothenia coriiceps; an omnivorous sea star, tion of endosymbiont genes into the host cell. Our se- Odontaster validus; and a herbivorous amphipod, Gon- quencing effort has produced about 1000 unique ESTs dogenia antarctica). -
On Different Host Plants
Riis et al.: Bionomics of Cyrtomenus bergi on host plants 1 BIONOMICS AND POPULATION GROWTH STATISTICS OF CYRTOMENUS BERGI (HEMIPTERA: CYDNIDAE) ON DIFFERENT HOST PLANTS LISBETH RIIS1,2, ANTHONY CHARLES BELLOTTI1 AND BERNARDO ARIAS1 1Centro International de Agricultural Tropical (CIAT), Pest and Disease Management Unit A.A. 6713 Cali, Colombia S.A. 2Department of Ecology and Molecular Biology, Royal Veterinary and Agricultural University (RVAU) Copenhagen, Denmark ABSTRACT Cyrtomenus bergi Froeschner (Hemiptera: Cydnidae) is a polyphagous subterranean bur- rower bug reported on various crops and weeds in the field. Bionomics and population growth statistics of C. bergi while feeding on peanut (Arachis hypogaea L.), pinto peanut (Arachis pintoi, Krapovickas et Gregory), maize (Zea mays L.), sorghum (Sorghum bicolor [L.] Moench), welsh onion (Allium fistulosum L.),and sweet and bitter cassava (Manihot es- culenta Crantz) were calculated from development time, survival of immature stages, and reproduction and female longevity under laboratory conditions. Free-choice host plant selec- tion among peanut, maize and sweet cassava was recorded with separate rearings of C. bergi from the different hosts. Optimal performance of C. bergi as measured by fecundity, sur- vival, and intrinsic rate of population increase occurred on peanut and pinto peanut followed by maize. Sweet cassava, sorghum, and welsh onion were not favorable hosts, and C. bergi was unable to complete its life cycle on bitter cassava. In the free-choice test, insects reared on peanut and maize prior to the experiments were less active in their search for food, whereas insects reared on cassava prior to the experiment showed a clear preference for pea- nut and maize over cassava. -
A Reevaluation of Predatory Orbiliaceous Fungi. II. a New Generic Concept
©Verlag Ferdinand Berger & Söhne Ges.m.b.H., Horn, Austria, download unter www.biologiezentrum.at A reevaluation of predatory orbiliaceous fungi. II. A new generic concept Markus Scholler1, Gregor Hagedorn2 & A. Rubner1 Fachrichtung Biologie, Mykologisches Labor, Universität Greifswald, Jahn-Str. 15, 17487 Greifswald, Germany 2Institut für Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit, Biologische Bundesanstalt für Land- und Forstwirtschaft, Königin-Luise-Str. 19, 14195 Berlin, Germany M. Scholler, G. Hagedorn & A. Rubner (1999). A reevaluation of predatory orbiliaceous fungi. II. A new generic concept. - Sydowia 51(1): 89-113. A new genus concept is proposed for predatory anamorphic Orbiliaceae in which the trapping device is the main morphological criterion for the delimitation of the genera. Molecular, ecological, physiological, biological, and further mor- phological features are taken into account as well. Following the groups identified by Hagedorn & Scholler (1999), these predatory fungi are divided into four genera: Arthrobotrys Corda forming adhesive networks, Drechslerella Subram. forming constricting rings, Dactylellina M. Morelet forming stalked adhesive knobs, and Gamsylella gen. nov. for species producing adhesive columns and unstalked knobs. Eighty-two species are accepted, for 51 of which new combinations are proposed. Keywords: Nematophagous fungi, Orbiliaceae, Arlhrobolrys, Daclylellina, Drechslerella, Gamsylella gen. nov, trapping devices, taxonomy. Present generic and phylogenetic concepts for predatory -
Biological Water Quality Assessment of Water Being Supplied to Male Hostels at Obafemi Awolowo University, Ile Ife
Scientific Research Journal (SCIRJ) ISSN 2201-2796 BIOLOGICAL WATER QUALITY ASSESSMENT OF WATER BEING SUPPLIED TO MALE HOSTELS AT OBAFEMI AWOLOWO UNIVERSITY, ILE IFE Njoku, Rapheal Chukwunonso Publication Partner: SCIRJ Scientific Research Journal (SCIRJ) ISSN 2201-2796 BIOLOGICAL WATER QUALITY ASSESSMENT OF WATER BEING SUPPLIED TO MALE HOSTELS AT OBAFEMI AWOLOWO UNIVERSITY, ILE IFE Authored by: Njoku, Rapheal Chukwunonso Department of Zoology Obafemi Awolowo University, Ile Ife, Nigeria. Publishing Partner: Scientific Research Journal (SCIRJ) Website: http://www.scirj.org/ ISSN: 2201-2796 Scientific Research Journal (SCIRJ) ISSN 2201-2796 Preface Biological water quality assessment of water being supplied to Male hostels at Obafemi Awolowo University, Ile Ife was done by collecting samples from flowing tap and storage tanks in each hostel over a period of six weeks. The tap and storage water supplied to the male hostels was found to consist of a total of 46 genera of plankton of which 15 were zooplankton and 31 were phytoplankton. The genera belong to 7 phytoplankton phyla (Bacillarophyta, Chlorophyta,Euglenophyta, Ochrophyta,Dinoflagellata, Cyanobacteria and Charophyta)and 5 zooplankton phyla (Cercozoa, Rotifera, Amoebozoa, Arthropoda and Ciliophora).Class Zynematophyceae (Division Charophyta)was the most abundant phytoplankton, represented by six species (Closterium ehrenbergii, Strogonium, Genicularia, Zygnemopsis, Docidium and Zygnema). Of these species, Genicularia was the most abundant. Amongst the Zooplankton,Mononogonta was the most abundant as represented by nine species namely Argonotholca foliacea, Trichocerca bicristata, Trichocerca chatonni, Trichocerca elongata, Trichocerca porcellus, Trichocerca similis, Brachionus calyciflorus, Brachionus falcatus and Hexarthra mira. The most abundant zooplankton species was Cyclops bicuspidatus of the class Maxillopoda. The highest total abundance was recorded at the sixth week of sampling. -
Taxonomy and Nomenclature of the Conjugatophyceae (= Zygnematophyceae)
Review Algae 2013, 28(1): 1-29 http://dx.doi.org/10.4490/algae.2013.28.1.001 Open Access Taxonomy and nomenclature of the Conjugatophyceae (= Zygnematophyceae) Michael D. Guiry1,* 1AlgaeBase and Irish Seaweed Research Group, Ryan Institute, National University of Ireland, Galway, Ireland The conjugating algae, an almost exclusively freshwater and extraordinarily diverse group of streptophyte green algae, are referred to a class generally known as the Conjugatophyceae in Central Europe and the Zygnematophyceae elsewhere in the world. Conjugatophyceae is widely considered to be a descriptive name and Zygnematophyceae (‘Zygnemophyce- ae’) a typified name. However, both are typified names and Conjugatophyceae Engler (‘Conjugatae’) is the earlier name. Additionally, Zygnemophyceae Round is currently an invalid name and is validated here as Zygnematophyceae Round ex Guiry. The names of orders, families and genera for conjugating green algae are reviewed. For many years these algae were included in the ‘Conjugatae’, initially used as the equivalent of an order. The earliest use of the name Zygnematales appears to be by the American phycologist Charles Edwin Bessey (1845-1915), and it was he who first formally redistrib- uted all conjugating algae from the ‘Conjugatae’ to the orders Zygnematales and the Desmidiales. The family Closte- riaceae Bessey, currently encompassing Closterium and Spinoclosterium, is illegitimate as it was superfluous when first proposed, and its legitimization is herein proposed by nomenclatural conservation to facilitate use of the name. The ge- nus Debarya Wittrock, 1872 is shown to be illegitimate as it is a later homonym of Debarya Schulzer, 1866 (Ascomycota), and the substitute genus name Transeauina Guiry is proposed together with appropriate combinations for 13 species currently assigned to the genus Debarya Wittrock. -
Hidden Genetic Diversity in the Green Alga Spirogyra (Zygnematophyceae, Streptophyta) Charlotte Chen1, Michael HJ Barfuss2, Thomas Pröschold1,3 and Michael Schagerl1*
Chen et al. BMC Evolutionary Biology 2012, 12:77 http://www.biomedcentral.com/1471-2148/12/77 RESEARCH ARTICLE Open Access Hidden genetic diversity in the green alga Spirogyra (Zygnematophyceae, Streptophyta) Charlotte Chen1, Michael HJ Barfuss2, Thomas Pröschold1,3 and Michael Schagerl1* Abstract Background: The unbranched filamentous green alga Spirogyra (Streptophyta, Zygnemataceae) is easily recognizable based on its vegetative morphology, which shows one to several spiral chloroplasts. This simple structure falsely points to a low genetic diversity: Spirogyra is commonly excluded from phylogenetic analyses because the genus is known as a long-branch taxon caused by a high evolutionary rate. Results: We focused on this genetic diversity and sequenced 130 Spirogyra small subunit nuclear ribosomal DNA (SSU rDNA) strands of different origin. The resulting SSU rDNA sequences were used for phylogenetic analyses using complex evolutionary models (posterior probability, maximum likelihood, neighbor joining, and maximum parsimony methods). The sequences were between 1672 and 1779 nucleotides long. Sequence comparisons revealed 53 individual clones, but our results still support monophyly of the genus. Our data set did not contain a single slow-evolving taxon that would have been placed on a shorter branch compared to the remaining sequences. Out of 130 accessions analyzed, 72 showed a secondary loss of the 1506 group I intron, which formed a long-branched group within the genus. The phylogenetic relationship to the genus Spirotaenia was not resolved satisfactorily. The genetic distance within the genus Spirogyra exceeded the distances measured within any other genus of the remaining Zygnemataceae included in this study. Conclusion: Overall, we define eight distinct clades of Spirogyra, one of them including the genus Sirogonium.