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Afonso, C.L., Amarasinghe, G.K., Bányai, K., Bào, Y., Basler, C.F., Bavari, S., Bejerman, N., Blasdell, K.R., Briand, F-X

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Afonso, C.L., Amarasinghe, G.K., Bányai, K., Bào, Y., Basler, C.F., Bavari, S., Bejerman, N., Blasdell, K.R., Briand, F-X RESEARCH REPOSITORY This is the author’s final version of the work, as accepted for publication following peer review but without the publisher’s layout or pagination. The definitive version is available at: http://dx.doi.org/10.1007/s00705-016-2880-1 Afonso, C.L., Amarasinghe, G.K., Bányai, K., Bào, Y., Basler, C.F., Bavari, S., Bejerman, N., Blasdell, K.R., Briand, F-X, Briese, T., Bukreyev, A., Calisher, C.H., Chandran, K., Chéng, J., Clawson, A. N., Collins, P.L., Dietzgen, R.G., Dolnik, O., Domier, L.L., Dürrwald, R., Dye, J.M., Easton, A.J., Ebihara, H., Farkas, S.L., Freitas-Astúa, J., Formenty, P., Fouchier, R.A.M., Fù, Y., Ghedin, E., Goodin, M.M., Hewson, R., Horie, M., Hyndman, T.H., Jiāng, D., Kitajima, E.W., Kobinger, G.P., Kondo, H., Kurath, G., Lamb, R.A., Lenardon, S., Leroy, E.M., Li, C-X, Lin, X-D, Liú, L., Longdon, B., Marton, S., Maisner, A., Mühlberger, E., Netesov, S.V., Nowotny, N., Patterson, J.L., Payne, S. L., Paweska, J.T., Randall, R. E., Rima, B.K., Rota, P., Rubbenstroth, D., Schwemmle, M., Shi, M., Smither, S.J., Stenglein, M.D., Stone, D.M., Takada, A., Terregino, C., Tesh, R.B., Tian, J-H, Tomonaga, K., Tordo, N., Towner, J.S., Vasilakis, N., Verbeek, M., Volchkov, V.E., Wahl-Jensen, V., Walsh, J.A., Walker, P.J., Wang, D., Wang, L-F, Wetzel, T., Whitfield, A.E., Xiè, J., Yuen, K-Y, Zhang, Y-Z and Kuhn, J.H. (2016) Taxonomy of the order Mononegavirales: update 2016. Archives of Virology, 161 (8). pp. 2351-2360. http://researchrepository.murdoch.edu.au/id/eprint/31449 Copyright: © 2016 Springer-Verlag Wien It is posted here for your personal use. No further distribution is permitted. 1 TAXONOMY OF THE ORDER MONONEGAVIRALES: UPDATE 2016 2 3 Claudio L. Afonso1, Gaya K. Amarasinghe2,#, Krisztián Bányai3,4, Yīmíng Bào5, 4 Christopher F. Basler6,#, Sina Bavari7,#, Nicolás Bejerman8.9, Kim R. Blasdell10,&, François- 5 Xavier Briand11, Thomas Briese12,$, Alexander Bukreyev13,#, Charles H. Calisher14,&, 6 Kartik Chandran15,#, Jiāsēn Chéng16, Anna N. Clawson17, Peter L. Collins18,^, Ralf G. 7 Dietzgen19,†,‡,&, Olga Dolnik20,#, Leslie L. Domier21,‡, Ralf Dürrwald22,$, John M. Dye7,#, 8 Andrew J. Easton23,†,^, Hideki Ebihara24,#, Szilvia L. Farkas3, Juliana Freitas-Astúa25, 9 Pierre Formenty26,#, Ron A. M. Fouchier27,^, Yànpíng Fù16, Elodie Ghedin28,‡, Michael M. 10 Goodin29, Roger Hewson30,#, Masayuki Horie31,$, Timothy H. Hyndman32, Dàohóng 11 Jiāng16,‡, Elliot W. Kitajima33, Gary P. Kobinger34,#, Hideki Kondo35,&, Gael Kurath36,†,^,&, 12 Robert A. Lamb37,38,^, Sergio Lenardon8, Eric M. Leroy39,#, Ci-Xiu Li 40,41, Xian-Dan Lin42, 13 Lìjiāng Liú16, Ben Longdon43,&, Szilvia Marton3, Andrea Maisner20,^, Elke Mühlberger44,#, 14 Sergey V. Netesov45,#, Norbert Nowotny46,47,$,†, Jean L. Patterson48,#, Susan L. Payne49,$, 15 Janusz T. Paweska50,#, Rick E. Randall51,^, Bertus K. Rima52,†,^, Paul Rota53,^, Dennis 16 Rubbenstroth54,$,†, Martin Schwemmle54,$, Mang Shi40, Sophie J. Smither55,#, Mark D. 17 Stenglein56, David M. Stone57,&, Ayato Takada58,#, Calogero Terregino59, Robert B. 18 Tesh13,&, Jun-Hua Tian60, Keizo Tomonaga61,$, Noël Tordo62,&, Jonathan S. Towner63,#, 19 Nikos Vasilakis13†,‡,&, Martin Verbeek64, Viktor E. Volchkov65,#, Victoria Wahl-Jensen66,#, 20 John A. Walsh23, Peter J. Walker10,†,&, David Wang67,‡, Lin-Fa Wang68,69,^, Thierry 21 Wetzel70, Anna E. Whitfield71,&, Jiǎtāo Xiè16, Kwok-Yung Yuen72, Yong-Zhen Zhang40, and 22 Jens H. Kuhn17,$,#,†,‡,* 23 Afonso et al. 1 1Southeast Poultry Research Laboratory, Agricultural Research Service, US Department of 2 Agriculture, Athens, Georgia, USA; 2Department of Pathology and Immunology, Washington 3 University School of Medicine, St. Louis, Missouri, USA; 4Institute for Veterinary Medical 4 Research, Centre for Agricultural Research, Hungarian Academy of Sciences, Budapest, 5 Hungary; 5Information Engineering Branch, National Center for Biotechnology Information, 6 National Library of Medicine, National Institutes of Health, Bethesda, Maryland, USA; 6Center 7 for Microbial Pathogenesis; Institute for Biomedical Sciences; Georgia State University; Atlanta, 8 GA, USA; 7United States Army Medical Research Institute of Infectious Diseases, Fort Detrick, 9 Frederick, Maryland, USA; 8Instituto de Patología Vegetal, Centro de Investigaciones 10 Agropecuarias, Instituto Nacional de Tecnología Agropecuaria, Córdoba, Argentina; 9Consejo 11 Nacional de Investigaciones Científicas y Técnicas, Argentina; 10CSIRO Health and Biosecurity, 12 Australian Animal Health Laboratory, Geelong, Victoria, Australia; 11 French Agency for Food, 13 Environmental and Occupational Health & Safety, Avian and Rabbit Virology Immunology and 14 Parasitology Unit, Ploufragan, France; 12Center for Infection and Immunity, Mailman School of 15 Public Health, Columbia University, New York, New York, USA; 13Center for Biodefense and 16 Emerging Infectious Diseases, Department of Pathology, The University of Texas Medical 17 Branch, Galveston, Texas, USA; 14Arthropod-Borne and Infectious Diseases Laboratory, College 18 of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, 19 Colorado, USA; 15Department of Microbiology and Immunology, Albert Einstein College of 20 Medicine, Bronx, New York, USA; 16State Key Laboratory of Agricultural Microbiology, The 21 Provincial Key Lab of Plant Pathology of Húběi Province, College of Plant Science and 22 Technology, Huázhōng Agricultural University, Wǔhàn, China; 17Integrated Research Facility at 23 Fort Detrick, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Mononegavirales Taxonomy Update 2 Afonso et al. 1 Frederick, Maryland, USA; 18Respiratory Viruses Section, Laboratory of Infectious Diseases, 2 National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, 3 Maryland; 19Queensland Alliance for Agriculture and Food Innovation, The University of 4 Queensland, St. Lucia, Queensland, Australia; 20Institute of Virology, Philipps University 5 Marburg, Marburg, Germany; 21Department of Crop Sciences, University of Illinois, Illinois, 6 USA; 22IDT Biologika, Dessau-Rosslau, Germany; 23School of Life Sciences, University of 7 Warwick, Coventry, UK; 24Rocky Mountain Laboratories Integrated Research Facility, National 8 Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, Montana, 9 USA; 25Embrapa Cassava and Fruits, Cruz das Almas, Bahia, Brazil; 26World Health 10 Organization, Geneva, Switzerland; 27Department of Viroscience, Postgraduate School 11 Molecular Medicine, Erasmus University Medical Center, Rotterdam, The Netherlands; 28Center 12 for Genomics and Systems Biology, Department of Biology, New York University, New York, 13 New York, USA; 29Plant Pathology, University of Kentucky, Lexington, Kentucky, USA; 14 30Public Health England, Porton Down, Wiltshire, Salisbury, UK; 31Transboundary Animal 15 Diseases Research Center, Joint Faculty of Veterinary Medicine, Kagoshima University, Japan; 16 32Murdoch University, School of Veterinary and Life Sciences, Murdoch, Western Australia, 17 Australia; 33Núcleo de Apoio à Pesquisa em Microscopia Eletrônica Aplicada a Agricultura, 18 Escola Superior de Agricultura "Luiz de Queiroz", Universidade de São Paulo, Piracicaba, São 19 Paulo, Brazil; 34Special Pathogens Program, National Microbiology Laboratory, Public Health 20 Agency of Canada, Winnipeg, Manitoba, Canada; 35Institute of Plant Science and Resources, 21 Okayama University, Kurashiki, Japan; 36US Geological Survey Western Fisheries Research 22 Center, Seattle, Washington, USA; 37Department of Molecular Biosciences, Northwestern 23 University, Evanston, Illinois, USA; 38Howard Hughes Medical Institute, Northwestern Mononegavirales Taxonomy Update 3 Afonso et al. 1 University, Evanston, Illinois, USA; 39Centre International de Recherches Médicales de 2 Franceville, Institut de Recherche pour le Développement, Franceville, Gabon; 40State Key 3 Laboratory for Infectious Disease Prevention and Control; National Institute for Communicable 4 Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Běijīng, 5 China; 41Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, 6 Hángzhōu, China; 42Wēnzhōu Center for Disease Control and Prevention, Wēnzhōu, China; 43 7 Department of Genetics,University of Cambridge,Cambridge, UK; 44Department of 8 Microbiology and National Emerging Infectious Diseases Laboratory, Boston University School 9 of Medicine, Boston, Massachusetts, USA; 45Novosibirsk State University, Novosibirsk, 10 Novosibirsk Oblast, Russia; 46Institute of Virology, University of Veterinary Medicine, Vienna, 11 Austria; 47 Department of Basic Medical Sciences, College of Medicine, Mohammed Bin Rashid 12 University of Medicine and Health Sciences, Dubai, United Arab Emirates; 48Department of 13 Virology and Immunology, Texas Biomedical Research Institute, San Antonio, Texas, USA; 14 49Department of Veterinary Pathobiology, College of Veterinary Medicine and Biomedical 15 Sciences, Texas A&M University, College Station, Texas, USA; 50Center for Emerging and 16 Zoonotic Diseases, National Institute for Communicable Diseases of the National Health 17 Laboratory Service, Sandringham-Johannesburg, Gauteng, South Africa; 51Biomedical Sciences 18 Research Complex, University of St. Andrews, St. Andrews, Scotland, UK; 52Centre for 19 Experimental Medicine, School of Medicine, Dentistry and Biomedical Sciences, The Queen's 20 University of Belfast, Belfast, Northern
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