Sponge Diversity and Community Composition in Irish Bathyal Coral Reefs
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New Zealand Oceanographic Institute Memoir 100
ISSN 0083-7903, 100 (Print) ISSN 2538-1016; 100 (Online) , , II COVER PHOTO. Dictyodendrilla cf. cavernosa (Lendenfeld, 1883) (type species of Dictyodendri/la Bergquist, 1980) (see page 24), from NZOI Stn I827, near Rikoriko Cave entrance, Poor Knights Islands Marine Reserve. Photo: Ken Grange, NZOI. This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ NATIONAL INSTITUTE OF WATER AND ATMOSPHERIC RESEARCH The Marine Fauna of New Zealand: Index to the Fauna 2. Porifera by ELLIOT W. DAWSON N .Z. Oceanographic Institute, Wellington New Zealand Oceanographic Institute Memoir 100 1993 • This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ Cataloguing in publication DAWSON, E.W. The marine fauna of New Zealand: Index to the Fauna 2. Porifera / by Elliot W. Dawson - Wellington: New Zealand Oceanographic Institute, 1993. (New Zealand Oceanographic Institute memoir, ISSN 0083-7903, 100) ISBN 0-478-08310-6 I. Title II. Series UDC Series Editor Dennis P. Gordon Typeset by Rose-Marie C. Thompson NIWA Oceanographic (NZOI) National Institute of Water and Atmospheric Research Received for publication: 17 July 1991 © NIWA Copyright 1993 2 This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ CONTENTS Page ABSTRACT 5 INTRODUCTION 5 SCOPE AND ARRANGEMENT 7 SYSTEMATIC LIST 8 Class DEMOSPONGIAE 8 Subclass Homosclcromorpha .............................................................................................. -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Chapter Two Marine Organisms
THE SINGAPORE BLUE PLAN 2018 EDITORS ZEEHAN JAAFAR DANWEI HUANG JANI THUAIBAH ISA TANZIL YAN XIANG OW NICHOLAS YAP PUBLISHED BY THE SINGAPORE INSTITUTE OF BIOLOGY OCTOBER 2018 THE SINGAPORE BLUE PLAN 2018 PUBLISHER THE SINGAPORE INSTITUTE OF BIOLOGY C/O NSSE NATIONAL INSTITUTE OF EDUCATION 1 NANYANG WALK SINGAPORE 637616 CONTACT: [email protected] ISBN: 978-981-11-9018-6 COPYRIGHT © TEXT THE SINGAPORE INSTITUTE OF BIOLOGY COPYRIGHT © PHOTOGRAPHS AND FIGURES BY ORINGAL CONTRIBUTORS AS CREDITED DATE OF PUBLICATION: OCTOBER 2018 EDITED BY: Z. JAAFAR, D. HUANG, J.T.I. TANZIL, Y.X. OW, AND N. YAP COVER DESIGN BY: ABIGAYLE NG THE SINGAPORE BLUE PLAN 2018 ACKNOWLEDGEMENTS The editorial team owes a deep gratitude to all contributors of The Singapore Blue Plan 2018 who have tirelessly volunteered their expertise and effort into this document. We are fortunate to receive the guidance and mentorship of Professor Leo Tan, Professor Chou Loke Ming, Professor Peter Ng, and Mr Francis Lim throughout the planning and preparation stages of The Blue Plan 2018. We are indebted to Dr. Serena Teo, Ms Ria Tan and Dr Neo Mei Lin who have made edits that improved the earlier drafts of this document. We are grateful to contributors of photographs: Heng Pei Yan, the Comprehensive Marine Biodiversity Survey photography team, Ria Tan, Sudhanshi Jain, Randolph Quek, Theresa Su, Oh Ren Min, Neo Mei Lin, Abraham Matthew, Rene Ong, van Heurn FC, Lim Swee Cheng, Tran Anh Duc, and Zarina Zainul. We thank The Singapore Institute of Biology for publishing and printing the The Singapore Blue Plan 2018. -
New Species from the Deep Pacific Suggest That Carnivorous Sponges Date Back to the Early Jurassic. Some Deep-Sea Poecilosclerid
CORE Metadata, citation and similar papers at core.ac.uk Provided by Nature Precedings New species from the deep Pacific suggest that carnivorous sponges date back to the Early Jurassic. Jean Vacelet1 & Michelle Kelly2 1Centre d’Océanologie de Marseille, Aix-Marseille Université, CNRS UMR 6540 DIMAR, Station Marine d’Endoume, rue Batterie des Lions, 13007 Marseille, France ([email protected]) 2National Centre for Aquatic Biodiversity and Biosecurity, National Institute of Water & Atmospheric Research Ltd, P. O. Box 109-695, Newmarket, Auckland, New Zealand ([email protected]) Some deep-sea poecilosclerid sponges (Porifera) have developed a carnivorous feeding habit that is very surprising in sponges1. As shown by the typical morphology of their spicules, they most probably evolved from “normal sponges” under the difficult conditions of a deep-sea environment. Such evolution, which implies the loss of the diagnostic character of the phylum Porifera, i.e. a filter feeding habit through a complex aquiferous system, should be of great interest in the understanding of the origin of metazoans. Some scenarios, based on the hypothesis of the paraphyly of Porifera, allege that metazoans could derive from a sponge filter-feeding body plan. A difficulty, however, is to imagine the transition from a sponge grade of organization to other organization plans2. Carnivorous sponges demonstrate that a functional, non filter-feeding animal may derive from a conventional sponge body plan, albeit nothing is known of the age of this evolution. Here we report that newly discovered species of Chondrocladia from the deep Pacific display special spicules that were previously recorded only as isolated spicules from sediment dating back to the Early Jurassic and Miocene periods. -
Carnivorous Sponges of the Atlantic and Arctic Oceans
&DUQLYRURXVVSRQJHVRIWKH$WODQWLFDQG $UFWLF2FHDQV 3K\ORJHQ\WD[RQRP\GLVWULEXWLRQDQGPLFURELDODVVRFLDWLRQVRIWKH &ODGRUKL]LGDH 'HPRVSRQJLDH3RHFLORVFOHULGD -RQ7KRPDVVHQ+HVWHWXQ Dissertation for the degree of philosophiae doctor (PhD) at the University of Bergen 'LVVHUWDWLRQGDWH1RYHPEHUWK © Copyright Jon Thomassen Hestetun The material in this publication is protected by copyright law. Year: 2016 Title: Carnivorous sponges of the Atlantic and Arctic Oceans Phylogeny, taxonomy, distribution and microbial associations of the Cladorhizidae (Demospongiae, Poecilosclerida) Author: Jon Thomassen Hestetun Print: AiT Bjerch AS / University of Bergen 3 Scientific environment This PhD project was financed through a four-year PhD position at the University of Bergen, and the study was conducted at the Department of Biology, Marine biodiversity research group, and the Centre of Excellence (SFF) Centre for Geobiology at the University of Bergen. The work was additionally funded by grants from the Norwegian Biodiversity Centre (grant to H.T. Rapp, project number 70184219), the Norwegian Academy of Science and Letters (grant to H.T. Rapp), the Research Council of Norway (through contract number 179560), the SponGES project through Horizon 2020, the European Union Framework Programme for Research and Innovation (grant agreement No 679849), the Meltzer Fund, and the Joint Fund for the Advancement of Biological Research at the University of Bergen. 4 5 Acknowledgements I have, initially through my master’s thesis and now during these four years of my PhD, in all been involved with carnivorous sponges for some six years. Trying to look back and somehow summarizing my experience with this work a certain realization springs to mind: It took some time before I understood my luck. My first in-depth exposure to sponges was in undergraduate zoology, and I especially remember watching “The Shape of Life”, an American PBS-produced documentary series focusing on the different animal phyla, with an enthusiastic Dr. -
Microbiome Exploration of Deep-Sea Carnivorous Cladorhizidae Sponges
Microbiome exploration of deep-sea carnivorous Cladorhizidae sponges by Joost Theo Petra Verhoeven A Thesis submitted to the School of Graduate Studies in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Biology Memorial University of Newfoundland March 2019 St. John’s, Newfoundland and Labrador ABSTRACT Members of the sponge family Cladorhizidae are unique in having replaced the typical filter-feeding strategy of sponges by a predatory lifestyle, capturing and digesting small prey. These carnivorous sponges are found in many different environments, but are particularly abundant in deep waters, where they constitute a substantial component of the benthos. Sponges are known to host a wide range of microbial associates (microbiome) important for host health, but the extent of the microbiome in carnivorous sponges has never been extensively investigated and their importance is poorly understood. In this thesis, the microbiome of two deep-sea carnivorous sponge species (Chondrocladia grandis and Cladorhiza oxeata) is investigated for the first time, leveraging recent advances in high-throughput sequencing and through custom developed bioinformatic and molecular methods. Microbiome analyses showed that the carnivorous sponges co-occur with microorganisms and large differences in the composition and type of associations were observed between sponge species. Tissues of C. grandis hosted diverse bacterial communities, similar in composition between individuals, in stark contrast to C. oxeata where low microbial diversity was found with a high host-to-host variability. In C. grandis the microbiome was not homogeneous throughout the host tissue, and significant shifts occured within community members across anatomical regions, with the enrichment of specific bacterial taxa in particular anatomical niches, indicating a potential symbiotic role of such taxa within processes like prey digestion and chemolithoautotrophy. -
Preliminary Checklist of Extant Endemic Species and Subspecies of the Windward Dutch Caribbean (St
Preliminary checklist of extant endemic species and subspecies of the windward Dutch Caribbean (St. Martin, St. Eustatius, Saba and the Saba Bank) Authors: O.G. Bos, P.A.J. Bakker, R.J.H.G. Henkens, J. A. de Freitas, A.O. Debrot Wageningen University & Research rapport C067/18 Preliminary checklist of extant endemic species and subspecies of the windward Dutch Caribbean (St. Martin, St. Eustatius, Saba and the Saba Bank) Authors: O.G. Bos1, P.A.J. Bakker2, R.J.H.G. Henkens3, J. A. de Freitas4, A.O. Debrot1 1. Wageningen Marine Research 2. Naturalis Biodiversity Center 3. Wageningen Environmental Research 4. Carmabi Publication date: 18 October 2018 This research project was carried out by Wageningen Marine Research at the request of and with funding from the Ministry of Agriculture, Nature and Food Quality for the purposes of Policy Support Research Theme ‘Caribbean Netherlands' (project no. BO-43-021.04-012). Wageningen Marine Research Den Helder, October 2018 CONFIDENTIAL no Wageningen Marine Research report C067/18 Bos OG, Bakker PAJ, Henkens RJHG, De Freitas JA, Debrot AO (2018). Preliminary checklist of extant endemic species of St. Martin, St. Eustatius, Saba and Saba Bank. Wageningen, Wageningen Marine Research (University & Research centre), Wageningen Marine Research report C067/18 Keywords: endemic species, Caribbean, Saba, Saint Eustatius, Saint Marten, Saba Bank Cover photo: endemic Anolis schwartzi in de Quill crater, St Eustatius (photo: A.O. Debrot) Date: 18 th of October 2018 Client: Ministry of LNV Attn.: H. Haanstra PO Box 20401 2500 EK The Hague The Netherlands BAS code BO-43-021.04-012 (KD-2018-055) This report can be downloaded for free from https://doi.org/10.18174/460388 Wageningen Marine Research provides no printed copies of reports Wageningen Marine Research is ISO 9001:2008 certified. -
Porifera) in Singapore and Description of a New Species of Forcepia (Poecilosclerida: Coelosphaeridae)
Contributions to Zoology, 81 (1) 55-71 (2012) Biodiversity of shallow-water sponges (Porifera) in Singapore and description of a new species of Forcepia (Poecilosclerida: Coelosphaeridae) Swee-Cheng Lim1, 3, Nicole J. de Voogd2, Koh-Siang Tan1 1 Tropical Marine Science Institute, National University of Singapore, 18 Kent Ridge Road, Singapore 119227, Singapore 2 Netherlands Centre for Biodiversity, Naturalis, PO Box 9517, 2300 RA Leiden, The Netherlands 3 E-mail: [email protected] Key words: intertidal, Southeast Asia, sponge assemblage, subtidal, tropical Abstract gia) patera (Hardwicke, 1822) was the first sponge de- scribed from Singapore in the 19th century. This was A surprisingly high number of shallow water sponge species followed by Leucosolenia flexilis (Haeckel, 1872), (197) were recorded from extensive sampling of natural inter- Coelocarteria singaporensis (Carter, 1883) (as Phloeo tidal and subtidal habitats in Singapore (Southeast Asia) from May 2003 to June 2010. This is in spite of a highly modified dictyon), and Callyspongia (Cladochalina) diffusa coastline that encompasses one of the world’s largest container Ridley (1884). Subsequently, Dragnewitsch (1906) re- ports as well as extensive oil refining and bunkering industries. corded 24 sponge species from Tanjong Pagar and Pu- A total of 99 intertidal species was recorded in this study. Of lau Brani in the Singapore Strait. A further six species these, 53 species were recorded exclusively from the intertidal of sponge were reported from Singapore in the 1900s, zone and only 45 species were found on both intertidal and subtidal habitats, suggesting that tropical intertidal and subtidal although two species, namely Cinachyrella globulosa sponge assemblages are different and distinct. -
Hexasterophoran Glass Sponges of New Zealand (Porifera: Hexactinellida: Hexasterophora): Orders Hexactinosida, Aulocalycoida and Lychniscosida
Hexactinellida: Hexasterophora): Orders Hexactinosida, Aulocalycoida and Lychniscosida Aulocalycoida and Lychniscosida Hexactinellida: Hexasterophora): Orders Hexactinosida, The Marine Fauna of New Zealand: Hexasterophoran Glass Sponges Zealand (Porifera: ISSN 1174–0043; 124 Henry M. Reiswig and Michelle Kelly The Marine Fauna of New Zealand: Hexasterophoran Glass Sponges of New Zealand (Porifera: Hexactinellida: Hexasterophora): Orders Hexactinosida, Aulocalycoida and Lychniscosida Henry M. Reiswig and Michelle Kelly NIWA Biodiversity Memoir 124 COVER PHOTO Two unidentified hexasterophoran glass sponge species, the first possibly Farrea onychohexastera n. sp. (frilly white honeycomb sponge in several bushy patches), and the second possibly Chonelasma lamella, but also possibly C. chathamense n. sp. (lower left white fan), attached to the habitat-forming coral Solenosmilia variabilis, dominant at 1078 m on the Graveyard seamount complex of the Chatham Rise (NIWA station TAN0905/29: 42.726° S, 179.897° W). Image captured by DTIS (Deep Towed Imaging System) onboard RV Tangaroa, courtesy of NIWA Seamounts Programme (SFAS103), Oceans2020 (LINZ, MFish) and Rob Stewart, NIWA, Wellington (Photo: NIWA). This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ NATIONAL INSTITUTE OF WATER AND ATMOSPHERIC RESEARCH (NIWA) The Marine Fauna of New Zealand: Hexasterophoran Glass Sponges of New Zealand (Porifera: Hexactinellida: -
An Integrative Systematic Framework Helps to Reconstruct Skeletal
Dohrmann et al. Frontiers in Zoology (2017) 14:18 DOI 10.1186/s12983-017-0191-3 RESEARCH Open Access An integrative systematic framework helps to reconstruct skeletal evolution of glass sponges (Porifera, Hexactinellida) Martin Dohrmann1*, Christopher Kelley2, Michelle Kelly3, Andrzej Pisera4, John N. A. Hooper5,6 and Henry M. Reiswig7,8 Abstract Background: Glass sponges (Class Hexactinellida) are important components of deep-sea ecosystems and are of interest from geological and materials science perspectives. The reconstruction of their phylogeny with molecular data has only recently begun and shows a better agreement with morphology-based systematics than is typical for other sponge groups, likely because of a greater number of informative morphological characters. However, inconsistencies remain that have far-reaching implications for hypotheses about the evolution of their major skeletal construction types (body plans). Furthermore, less than half of all described extant genera have been sampled for molecular systematics, and several taxa important for understanding skeletal evolution are still missing. Increased taxon sampling for molecular phylogenetics of this group is therefore urgently needed. However, due to their remote habitat and often poorly preserved museum material, sequencing all 126 currently recognized extant genera will be difficult to achieve. Utilizing morphological data to incorporate unsequenced taxa into an integrative systematics framework therefore holds great promise, but it is unclear which methodological approach best suits this task. Results: Here, we increase the taxon sampling of four previously established molecular markers (18S, 28S, and 16S ribosomal DNA, as well as cytochrome oxidase subunit I) by 12 genera, for the first time including representatives of the order Aulocalycoida and the type genus of Dactylocalycidae, taxa that are key to understanding hexactinellid body plan evolution. -
The Unique Skeleton of Siliceous Sponges (Porifera; Hexactinellida and Demospongiae) That Evolved first from the Urmetazoa During the Proterozoic: a Review
Biogeosciences, 4, 219–232, 2007 www.biogeosciences.net/4/219/2007/ Biogeosciences © Author(s) 2007. This work is licensed under a Creative Commons License. The unique skeleton of siliceous sponges (Porifera; Hexactinellida and Demospongiae) that evolved first from the Urmetazoa during the Proterozoic: a review W. E. G. Muller¨ 1, Jinhe Li2, H. C. Schroder¨ 1, Li Qiao3, and Xiaohong Wang4 1Institut fur¨ Physiologische Chemie, Abteilung Angewandte Molekularbiologie, Duesbergweg 6, 55099 Mainz, Germany 2Institute of Oceanology, Chinese Academy of Sciences, 7 Nanhai Road, 266071 Qingdao, P. R. China 3Department of Materials Science and Technology, Tsinghua University, 100084 Beijing, P. R. China 4National Research Center for Geoanalysis, 26 Baiwanzhuang Dajie, 100037 Beijing, P. R. China Received: 8 January 2007 – Published in Biogeosciences Discuss.: 6 February 2007 Revised: 10 April 2007 – Accepted: 20 April 2007 – Published: 3 May 2007 Abstract. Sponges (phylum Porifera) had been considered an axial filament which harbors the silicatein. After intracel- as an enigmatic phylum, prior to the analysis of their genetic lular formation of the first lamella around the channel and repertoire/tool kit. Already with the isolation of the first ad- the subsequent extracellular apposition of further lamellae hesion molecule, galectin, it became clear that the sequences the spicules are completed in a net formed of collagen fibers. of sponge cell surface receptors and of molecules forming the The data summarized here substantiate that with the find- intracellular signal transduction pathways triggered by them, ing of silicatein a new aera in the field of bio/inorganic chem- share high similarity with those identified in other metazoan istry started. -
Zootaxa 20 Years: Phylum Porifera
Zootaxa 4979 (1): 038–056 ISSN 1175-5326 (print edition) https://www.mapress.com/j/zt/ Review ZOOTAXA Copyright © 2021 Magnolia Press ISSN 1175-5334 (online edition) https://doi.org/10.11646/zootaxa.4979.1.8 http://zoobank.org/urn:lsid:zoobank.org:pub:3409F59A-0552-44A8-89F0-4F0230CB27E7 Zootaxa 20 years: Phylum Porifera JOHN N.A. HOOPER1,2*, GERT WÖRHEIDE3,4,5, EDUARDO HAJDU6, DIRK ERPENBECK3,5, NICOLE J. DE VOOGD7,8 & MICHELLE KLAUTAU9 1Queensland Museum, PO Box 3300, South Brisbane 4101, Brisbane, Queensland, Australia [email protected], https://orcid.org/0000-0003-1722-5954 2Griffith Institute for Drug Discovery, Griffith University, Brisbane 4111, Queensland, Australia 3Department of Earth- and Environmental Sciences, Ludwig-Maximilians-Universität, Richard-Wagner Straße 10, 80333 Munich, Germany 4SNSB-Bavarian State Collection of Palaeontology and Geology, Richard-Wagner Straße 10, 80333 Munich, Germany 5GeoBio-Center, Ludwig-Maximilians-Universität München, Richard-Wagner Straße 10, 80333 Munich, Germany [email protected], https://orcid.org/0000-0002-6380-7421 [email protected], https://orcid.org/0000-0003-2716-1085 6Museu Nacional/UFRJ, TAXPO - Depto. Invertebrados, Quinta da Boa Vista, s/n 20940-040, Rio de Janeiro, RJ, BRASIL [email protected], https://orcid.org/0000-0002-8760-9403 7Naturalis Biodiversity Center, Dept. Marine Biodiversity, P.O. Box 9617, 2300 RA Leiden, The Netherlands [email protected], https://orcid.org/0000-0002-7985-5604 8Institute of Environmental Sciences, Leiden University, Leiden, The Netherlands 9Universidade Federal do Rio de Janeiro, Instituto de Biologia, Departamento de Zoologia, Av. Carlos Chagas Filho, 373, CEP 21941- 902, Rio de Janeiro, RJ, Brasil.