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Fungal Evolution: Major Ecological Adaptations and Evolutionary Transitions
Biol. Rev. (2019), pp. 000–000. 1 doi: 10.1111/brv.12510 Fungal evolution: major ecological adaptations and evolutionary transitions Miguel A. Naranjo-Ortiz1 and Toni Gabaldon´ 1,2,3∗ 1Department of Genomics and Bioinformatics, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain 2 Department of Experimental and Health Sciences, Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain 3ICREA, Pg. Lluís Companys 23, 08010 Barcelona, Spain ABSTRACT Fungi are a highly diverse group of heterotrophic eukaryotes characterized by the absence of phagotrophy and the presence of a chitinous cell wall. While unicellular fungi are far from rare, part of the evolutionary success of the group resides in their ability to grow indefinitely as a cylindrical multinucleated cell (hypha). Armed with these morphological traits and with an extremely high metabolical diversity, fungi have conquered numerous ecological niches and have shaped a whole world of interactions with other living organisms. Herein we survey the main evolutionary and ecological processes that have guided fungal diversity. We will first review the ecology and evolution of the zoosporic lineages and the process of terrestrialization, as one of the major evolutionary transitions in this kingdom. Several plausible scenarios have been proposed for fungal terrestralization and we here propose a new scenario, which considers icy environments as a transitory niche between water and emerged land. We then focus on exploring the main ecological relationships of Fungi with other organisms (other fungi, protozoans, animals and plants), as well as the origin of adaptations to certain specialized ecological niches within the group (lichens, black fungi and yeasts). -
Spatial and Temporal Dynamics of a Fungal Pathogen Promote Pattern Formation in a Tropical Agroecosystem
62 The Open Ecology Journal, 2009, 2, 62-73 Open Access Spatial and Temporal Dynamics of a Fungal Pathogen Promote Pattern Formation in a Tropical Agroecosystem Doug Jackson*,1, John Vandermeer1,2 and Ivette Perfecto2 1Department of Ecology and Evolutionary Biology, 2School of Natural Resources and Environment, University of Michigan, Ann Arbor, MI 48109, USA Abstract: Recent studies have shown that the spatial pattern of nests of an arboreal ant, Azteca instabilis (Hymenoptera: Formicidae), in a tropical coffee agroecosystem may emerge through self-organization. The proposed self-organization process involves both local expansion and density-dependent mortality of the ant colonies. We explored a possible mechanism for the density-dependent mortality involving the entomopathogenic fungus Lecanicillium lecanii. L. lecanii attacks a scale insect, Coccus viridis (Coccidae, Hemiptera), which is tended by A. instabilis in a mutualistic association. By attacking C. viridis, L. lecanii may have an indirect, negative effect on ant colony survival. To explore this hypothesis, we conducted investigations into the spatial and temporal distributions of L. lecanii. We measured incidence and severity at 4 spatial scales: (1) throughout a 45 hectare study plot; (2) in two 40 X 50 meter plots; (3) on coffee bushes within 4 m of two ant nests; and (3) on individual branches in a single coffee bush. The plot-level censuses did not reveal a clear spatial pattern, but the finer scale surveys show distinct patterns in the spread of infection over time. We also developed a simple cellular automata model of the coupled ant nest-L. lecanii system which is able to produce spatial patterns qualitatively and quantitatively similar to that found in the field. -
The Fungi of Slapton Ley National Nature Reserve and Environs
THE FUNGI OF SLAPTON LEY NATIONAL NATURE RESERVE AND ENVIRONS APRIL 2019 Image © Visit South Devon ASCOMYCOTA Order Family Name Abrothallales Abrothallaceae Abrothallus microspermus CY (IMI 164972 p.p., 296950), DM (IMI 279667, 279668, 362458), N4 (IMI 251260), Wood (IMI 400386), on thalli of Parmelia caperata and P. perlata. Mainly as the anamorph <it Abrothallus parmeliarum C, CY (IMI 164972), DM (IMI 159809, 159865), F1 (IMI 159892), 2, G2, H, I1 (IMI 188770), J2, N4 (IMI 166730), SV, on thalli of Parmelia carporrhizans, P Abrothallus parmotrematis DM, on Parmelia perlata, 1990, D.L. Hawksworth (IMI 400397, as Vouauxiomyces sp.) Abrothallus suecicus DM (IMI 194098); on apothecia of Ramalina fustigiata with st. conid. Phoma ranalinae Nordin; rare. (L2) Abrothallus usneae (as A. parmeliarum p.p.; L2) Acarosporales Acarosporaceae Acarospora fuscata H, on siliceous slabs (L1); CH, 1996, T. Chester. Polysporina simplex CH, 1996, T. Chester. Sarcogyne regularis CH, 1996, T. Chester; N4, on concrete posts; very rare (L1). Trimmatothelopsis B (IMI 152818), on granite memorial (L1) [EXTINCT] smaragdula Acrospermales Acrospermaceae Acrospermum compressum DM (IMI 194111), I1, S (IMI 18286a), on dead Urtica stems (L2); CY, on Urtica dioica stem, 1995, JLT. Acrospermum graminum I1, on Phragmites debris, 1990, M. Marsden (K). Amphisphaeriales Amphisphaeriaceae Beltraniella pirozynskii D1 (IMI 362071a), on Quercus ilex. Ceratosporium fuscescens I1 (IMI 188771c); J1 (IMI 362085), on dead Ulex stems. (L2) Ceriophora palustris F2 (IMI 186857); on dead Carex puniculata leaves. (L2) Lepteutypa cupressi SV (IMI 184280); on dying Thuja leaves. (L2) Monographella cucumerina (IMI 362759), on Myriophyllum spicatum; DM (IMI 192452); isol. ex vole dung. (L2); (IMI 360147, 360148, 361543, 361544, 361546). -
Sub-Lethal Effects of Lecanicillium Lecanii
agriculture Article Sub-Lethal Effects of Lecanicillium lecanii (Zimmermann)-Derived Partially Purified Protein and Its Potential Implication in Cotton (Gossypium hirsutum L.) Defense against Bemisia tabaci Gennadius (Aleyrodidae: Hemiptera) Yusuf Ali Abdulle 1,†, Talha Nazir 1,2,*,† , Samy Sayed 3 , Samy F. Mahmoud 4 , Muhammad Zeeshan Majeed 5 , Hafiz Muhammad Usman Aslam 6, Zubair Iqbal 7, Muhammad Shahid Nisar 2, Azhar Uddin Keerio 1, Habib Ali 8 and Dewen Qiu 1 1 State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100081, China; [email protected] (Y.A.A.); [email protected] (A.U.K.); [email protected] (D.Q.) 2 Department of Plant Protection, Faculty of Agricultural Sciences, Ghazi University, Dera Ghazi Khan 32200, Pakistan; [email protected] 3 Department of Science and Technology, University College-Ranyah, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia; [email protected] Citation: Abdulle, Y.A.; Nazir, T.; 4 Department of Biotechnology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia; Sayed, S.; Mahmoud, S.F.; Majeed, [email protected] M.Z.; Aslam, H.M.U.; Iqbal, Z.; Nisar, 5 Department of Entomology, College of Agriculture, University of Sargodha, Sargodha 40100, Pakistan; M.S.; Keerio, A.U.; Ali, H.; et al. [email protected] 6 Sub-Lethal Effects of Lecanicillium Department of Plant Pathology, Institute of Plant Protection (IPP), MNS-University of Agriculture, lecanii (Zimmermann)-Derived -
Lecanicillium Fungicola 150-1, the Causal Agent of Dry Bubble Disease Downloaded From
GENOME SEQUENCES crossm Genome Sequence of Lecanicillium fungicola 150-1, the Causal Agent of Dry Bubble Disease Downloaded from Alice M. Banks,a* Farhana Aminuddin,a Katherine Williams,a Thomas Batstone,a Gary L. A. Barker,a Gary D. Foster,a Andy M. Baileya aSchool of Biological Sciences, University of Bristol, Bristol, United Kingdom ABSTRACT The fungus Lecanicillium fungicola causes dry bubble disease in the http://mra.asm.org/ white button mushroom Agaricus bisporus. Control strategies are limited, as both the host and pathogen are fungi, and there is limited understanding of the interac- tions in this pathosystem. Here, we present the genome sequence of Lecanicillium fungicola strain 150-1. ecanicillium fungicola (Preuss) Zare & Gams [synonym: Verticillium fungicola (Preuss) LHassebrauk] (1), an ascomycete fungus of the order Hypocreales, is the causal agent of dry bubble disease of the white button mushroom Agaricus bisporus, as well as of on September 18, 2020 at Imperial College London other commercially cultivated basidiomycetes (2). Dry bubble disease presents symp- toms that include necrotic lesions on mushroom caps, stipe blowout, and undifferen- tiated tissue masses (2). Some factors involved in this interaction have been proposed based on suppression subtractive hybridization (SSH) and expressed sequence tag (EST) data (3). This disease is of economic importance, causing significant yield/quality losses in the mushroom industry (4). Control methods rely on rigorous hygiene procedures and targeted fungicide treatments; however, increased resistance against these fungi- cides has been reported (5, 6). Recent taxonomic revisions place L. fungicola close to several arthropod- and nematode-pathogenic fungi rather than to plant-pathogenic Verticillium spp. -
Diversity of Facultatively Anaerobic Microscopic Mycelial Fungi in Soils A
ISSN 0026-2617, Microbiology, 2008, Vol. 77, No. 1, pp. 90–98. © Pleiades Publishing, Ltd., 2008. Original Russian Text © A.V. Kurakov, R.B. Lavrent’ev, T.Yu. Nechitailo, P.N. Golyshin, D.G. Zvyagintsev, 2008, published in Mikrobiologiya, 2008, Vol. 77, No. 1, pp. 103–112. EXPERIMENTAL ARTICLES Diversity of Facultatively Anaerobic Microscopic Mycelial Fungi in Soils A. V. Kurakova,1, R. B. Lavrent’evb, T. Yu. Nechitailoc, P. N. Golyshinc, and D. G. Zvyagintsevb a International Biotechnology Center, Moscow State University, Moscow, 119992 Russia b Department of Soil Biology, Faculty of Soil Science, Moscow State University, Moscow, 119992 Russia c National Biotechnology Center, Mascheroder Weg 1, 38124 Braunschweig, Germany Received March 26, 2007 Abstract—The numbers of microscopic fungi isolated from soil samples after anaerobic incubation varied from tens to several hundreds of CFU per one gram of soil; a total of 30 species was found. This group is com- posed primarily of mitotic fungi of the ascomycete affinity belonging to the orders Hypocreales (Fusarium solani, F. oxysporum, Fusarium sp., Clonostachys grammicospora, C. rosea, Acremonium sp., Gliocladium penicilloides, Trichoderma aureoviride, T. harzianum, T. polysporum, T. viride, T. koningii, Lecanicillum leca- nii, and Tolypocladium inflatum) and Eurotiales (Aspergillus terreus, A. niger, and Paecilomyces lilacimus), as well as to the phylum Zygomycota, to the order Mucorales (Actinomucor elegans, Absidia glauca, Mucor cir- cinelloides, M. hiemalis, M. racemosus, Mucor sp., Rhizopus oryzae, Zygorrhynchus moelleri, Z. heterogamus, and Umbelopsis isabellina) and the order Mortierellales (Mortierella sp.). As much as 10–30% of the total amount of fungal mycelium remains viable for a long time (one month) under anaerobic conditions. -
Culture Inventory
For queries, contact the SFA leader: John Dunbar - [email protected] Fungal collection Putative ID Count Ascomycota Incertae sedis 4 Ascomycota Incertae sedis 3 Pseudogymnoascus 1 Basidiomycota Incertae sedis 1 Basidiomycota Incertae sedis 1 Capnodiales 29 Cladosporium 27 Mycosphaerella 1 Penidiella 1 Chaetothyriales 2 Exophiala 2 Coniochaetales 75 Coniochaeta 56 Lecythophora 19 Diaporthales 1 Prosthecium sp 1 Dothideales 16 Aureobasidium 16 Dothideomycetes incertae sedis 3 Dothideomycetes incertae sedis 3 Entylomatales 1 Entyloma 1 Eurotiales 393 Arthrinium 2 Aspergillus 172 Eladia 2 Emericella 5 Eurotiales 2 Neosartorya 1 Paecilomyces 13 Penicillium 176 Talaromyces 16 Thermomyces 4 Exobasidiomycetes incertae sedis 7 Tilletiopsis 7 Filobasidiales 53 Cryptococcus 53 Fungi incertae sedis 13 Fungi incertae sedis 12 Veroneae 1 Glomerellales 1 Glomerella 1 Helotiales 34 Geomyces 32 Helotiales 1 Phialocephala 1 Hypocreales 338 Acremonium 20 Bionectria 15 Cosmospora 1 Cylindrocarpon 2 Fusarium 45 Gibberella 1 Hypocrea 12 Ilyonectria 13 Lecanicillium 5 Myrothecium 9 Nectria 1 Pochonia 29 Purpureocillium 3 Sporothrix 1 Stachybotrys 3 Stanjemonium 2 Tolypocladium 1 Tolypocladium 2 Trichocladium 2 Trichoderma 171 Incertae sedis 20 Oidiodendron 20 Mortierellales 97 Massarineae 2 Mortierella 92 Mortierellales 3 Mortiererallales 2 Mortierella 2 Mucorales 109 Absidia 4 Backusella 1 Gongronella 1 Mucor 25 RhiZopus 13 Umbelopsis 60 Zygorhynchus 5 Myrmecridium 2 Myrmecridium 2 Onygenales 4 Auxarthron 3 Myceliophthora 1 Pezizales 2 PeZiZales 1 TerfeZia 1 -
Sequencing Abstracts Msa Annual Meeting Berkeley, California 7-11 August 2016
M S A 2 0 1 6 SEQUENCING ABSTRACTS MSA ANNUAL MEETING BERKELEY, CALIFORNIA 7-11 AUGUST 2016 MSA Special Addresses Presidential Address Kerry O’Donnell MSA President 2015–2016 Who do you love? Karling Lecture Arturo Casadevall Johns Hopkins Bloomberg School of Public Health Thoughts on virulence, melanin and the rise of mammals Workshops Nomenclature UNITE Student Workshop on Professional Development Abstracts for Symposia, Contributed formats for downloading and using locally or in a Talks, and Poster Sessions arranged by range of applications (e.g. QIIME, Mothur, SCATA). 4. Analysis tools - UNITE provides variety of analysis last name of primary author. Presenting tools including, for example, massBLASTer for author in *bold. blasting hundreds of sequences in one batch, ITSx for detecting and extracting ITS1 and ITS2 regions of ITS 1. UNITE - Unified system for the DNA based sequences from environmental communities, or fungal species linked to the classification ATOSH for assigning your unknown sequences to *Abarenkov, Kessy (1), Kõljalg, Urmas (1,2), SHs. 5. Custom search functions and unique views to Nilsson, R. Henrik (3), Taylor, Andy F. S. (4), fungal barcode sequences - these include extended Larsson, Karl-Hnerik (5), UNITE Community (6) search filters (e.g. source, locality, habitat, traits) for 1.Natural History Museum, University of Tartu, sequences and SHs, interactive maps and graphs, and Vanemuise 46, Tartu 51014; 2.Institute of Ecology views to the largest unidentified sequence clusters and Earth Sciences, University of Tartu, Lai 40, Tartu formed by sequences from multiple independent 51005, Estonia; 3.Department of Biological and ecological studies, and for which no metadata Environmental Sciences, University of Gothenburg, currently exists. -
What If Esca Disease of Grapevine Were Not a Fungal Disease?
Fungal Diversity (2012) 54:51–67 DOI 10.1007/s13225-012-0171-z What if esca disease of grapevine were not a fungal disease? Valérie Hofstetter & Bart Buyck & Daniel Croll & Olivier Viret & Arnaud Couloux & Katia Gindro Received: 20 March 2012 /Accepted: 1 April 2012 /Published online: 24 April 2012 # The Author(s) 2012. This article is published with open access at Springerlink.com Abstract Esca disease, which attacks the wood of grape- healthy and diseased adult plants and presumed esca patho- vine, has become increasingly devastating during the past gens were widespread and occurred in similar frequencies in three decades and represents today a major concern in all both plant types. Pioneer esca-associated fungi are not trans- wine-producing countries. This disease is attributed to a mitted from adult to nursery plants through the grafting group of systematically diverse fungi that are considered process. Consequently the presumed esca-associated fungal to be latent pathogens, however, this has not been conclu- pathogens are most likely saprobes decaying already senes- sively established. This study presents the first in-depth cent or dead wood resulting from intensive pruning, frost or comparison between the mycota of healthy and diseased other mecanical injuries as grafting. The cause of esca plants taken from the same vineyard to determine which disease therefore remains elusive and requires well execu- fungi become invasive when foliar symptoms of esca ap- tive scientific study. These results question the assumed pear. An unprecedented high fungal diversity, 158 species, pathogenicity of fungi in other diseases of plants or animals is here reported exclusively from grapevine wood in a single where identical mycota are retrieved from both diseased and Swiss vineyard plot. -
Entomopathogenic Fungal Identification
Entomopathogenic Fungal Identification updated November 2005 RICHARD A. HUMBER USDA-ARS Plant Protection Research Unit US Plant, Soil & Nutrition Laboratory Tower Road Ithaca, NY 14853-2901 Phone: 607-255-1276 / Fax: 607-255-1132 Email: Richard [email protected] or [email protected] http://arsef.fpsnl.cornell.edu Originally prepared for a workshop jointly sponsored by the American Phytopathological Society and Entomological Society of America Las Vegas, Nevada – 7 November 1998 - 2 - CONTENTS Foreword ......................................................................................................... 4 Important Techniques for Working with Entomopathogenic Fungi Compound micrscopes and Köhler illumination ................................... 5 Slide mounts ........................................................................................ 5 Key to Major Genera of Fungal Entomopathogens ........................................... 7 Brief Glossary of Mycological Terms ................................................................. 12 Fungal Genera Zygomycota: Entomophthorales Batkoa (Entomophthoraceae) ............................................................... 13 Conidiobolus (Ancylistaceae) .............................................................. 14 Entomophaga (Entomophthoraceae) .................................................. 15 Entomophthora (Entomophthoraceae) ............................................... 16 Neozygites (Neozygitaceae) ................................................................. 17 Pandora -
Laboratory Evaluation of Entomopathogenic Fungi As
Folia Forestalia Polonica, Series A – Forestry, 2018, Vol. 60 (2), 83–90 ORIGINAL ARTICLE DOI: 10.2478/ffp-2018-0008 Laboratory evaluation of entomopathogenic fungi as biological control agents against the bark beetle Pityogenes scitus Blandford (Coleoptera: Curculionidae) in Kashmir Abdul L. Khanday1 , Abdul A. Buhroo1, Avunjikkattu P. Ranjith2, Sławomir Mazur3 1 University of Kashmir, Post Graduate Department of Zoology, Section of Entomology, Srinagar-190006, Jammu and Kashmir, India, e-mail: [email protected] 2 University of Calicut, Department of Zoology, Insect Ecology and Ethology Laboratory, Kerala-673635, India 3 University of Łódź Branch in Tomaszów Mazowiecki, Institute of Forest Sciences, Konstytucji 3 Maja 65/67, 97-200 Tomaszów Mazowiecki, Poland AbstrAct The bark beetles (Coleoptera: Curculionidae) are widely recognised as one of the most damaging group of forest pests. Entomopathogenic fungi have shown great potential for the management of some bark beetle species. The ef- ficacy of three entomopathogenic fungi, namely, Beauveria bassiana (Balsamo) Vuillemin, Metarhizium anisopliae sensu lato (Metchnikoff) Sorokin and Lecanicillium lecanii (Zimmerman) Zare and Gams was tested against the bark beetle Pityogenes scitus Blandford under the laboratory conditions. An insecticide – cyclone 505 EC, was also used as positive control in the experiment. Each fungal suspension contained 1.0×109 spores of fungi in 1 ml. In treated branches, B. bassiana and M. anisopliae caused higher percentage of mortalities, that is, 58.33% and 48%, respectively, after 10 days of treatment and 85% and 71%, respectively, after 20 days of treatment. In petri plate assay, B. bassiana, M. anisopliae and L. lecanii caused 100%, 100% and 73.33% of mortality respectively. -
Savoryellales (Hypocreomycetidae, Sordariomycetes): a Novel Lineage
Mycologia, 103(6), 2011, pp. 1351–1371. DOI: 10.3852/11-102 # 2011 by The Mycological Society of America, Lawrence, KS 66044-8897 Savoryellales (Hypocreomycetidae, Sordariomycetes): a novel lineage of aquatic ascomycetes inferred from multiple-gene phylogenies of the genera Ascotaiwania, Ascothailandia, and Savoryella Nattawut Boonyuen1 Canalisporium) formed a new lineage that has Mycology Laboratory (BMYC), Bioresources Technology invaded both marine and freshwater habitats, indi- Unit (BTU), National Center for Genetic Engineering cating that these genera share a common ancestor and Biotechnology (BIOTEC), 113 Thailand Science and are closely related. Because they show no clear Park, Phaholyothin Road, Khlong 1, Khlong Luang, Pathumthani 12120, Thailand, and Department of relationship with any named order we erect a new Plant Pathology, Faculty of Agriculture, Kasetsart order Savoryellales in the subclass Hypocreomyceti- University, 50 Phaholyothin Road, Chatuchak, dae, Sordariomycetes. The genera Savoryella and Bangkok 10900, Thailand Ascothailandia are monophyletic, while the position Charuwan Chuaseeharonnachai of Ascotaiwania is unresolved. All three genera are Satinee Suetrong phylogenetically related and form a distinct clade Veera Sri-indrasutdhi similar to the unclassified group of marine ascomy- Somsak Sivichai cetes comprising the genera Swampomyces, Torpedos- E.B. Gareth Jones pora and Juncigera (TBM clade: Torpedospora/Bertia/ Mycology Laboratory (BMYC), Bioresources Technology Melanospora) in the Hypocreomycetidae incertae