Phylogeny and Host-Specificity of European Seed Beetles
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Large‐Scale Genomic Sequence Data Resolve the Deepest Divergences in the Legume Phylogeny and Support a Near‐Simultaneous Evolutionary Origin of All Six Subfamilies
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2020 Large‐scale genomic sequence data resolve the deepest divergences in the legume phylogeny and support a near‐simultaneous evolutionary origin of all six subfamilies Koenen, Erik J M ; Ojeda, Dario I ; Steeves, Royce ; Migliore, Jérémy ; Bakker, Freek T ; Wieringa, Jan J ; Kidner, Catherine ; Hardy, Olivier J ; Pennington, R Toby ; Bruneau, Anne ; Hughes, Colin E Abstract: Phylogenomics is increasingly used to infer deep‐branching relationships while revealing the complexity of evolutionary processes such as incomplete lineage sorting, hybridization/introgression and polyploidization. We investigate the deep‐branching relationships among subfamilies of the Leguminosae (or Fabaceae), the third largest angiosperm family. Despite their ecological and economic importance, a robust phylogenetic framework for legumes based on genome‐scale sequence data is lacking. We generated alignments of 72 chloroplast genes and 7621 homologous nuclear‐encoded proteins, for 157 and 76 taxa, respectively. We analysed these with maximum likelihood, Bayesian inference, and a multispecies coa- lescent summary method, and evaluated support for alternative topologies across gene trees. We resolve the deepest divergences in the legume phylogeny despite lack of phylogenetic signal across all chloroplast genes and the majority of nuclear genes. Strongly supported conflict in the remainder of nuclear genes is suggestive of incomplete lineage sorting. All six subfamilies originated nearly simultaneously, suggesting that the prevailing view of some subfamilies as ‘basal’ or ‘early‐diverging’ with respect to others should be abandoned, which has important implications for understanding the evolution of legume diversity and traits. -
The Genus Bruchus Was Restricted by Schilsky (6
THE HAIRY-VETCH BRUCHID, BRUCHUS BRACHIALIS FAHRAEUS, IN THE UNITED STATES ' By J. C. BRIDWELL, formerly Specialist in Bruchidae and Their Parasites, Division of Stored Product Insects^ Bureau of Entomology, and L. J. BOTTIMER, Assistant Entomologist^ Food and Drug Administration, United States Department of Agriculture INTRODUCTION The genus Bruchus was restricted by Schilsky (6) ^ to include only the immediate allies of Bruchus pisorum (L.), the pea weevil, of which he tabulated 24 species knowQ to him. To these may be added others doubtfully distinct, imperfectly known, or more recently described, which increase the nominal species of the genus to a total of about 46. All these species are native to the Palearctic region. Two of them are already well known in the United States as major pests of the plants affected. B. pisorum was the first of the genus and one of the first species of the family to be recognized. It was described in 1752, and was recorded as having destroyed in the 1740's the flourishing colonial American industry of producing dry peas for ships' stores. B. ruß- manus Boheman, the broadbean weevil, has now practically destroyed the broadbean industry of Caüfornia. A third species, B, hrachialis Fahraeus, has in recent years gained a foothold in this country, for in 1931 the junior author found it heavily infesting the seeds of vetches growing in New Jersey, Delaware, Maryland, and North Carolina, and in 1932 it was found in Virginia. In view of these facts it seems wise to present a brief summary of the knowledge at present available of the habits of the members of this genus and to point out the increased danger of their estabhshment in the United States as a result of changed commercial conditions. -
Chrysomela 43.10-8-04
CHRYSOMELA newsletter Dedicated to information about the Chrysomelidae Report No. 43.2 July 2004 INSIDE THIS ISSUE Fabreries in Fabreland 2- Editor’s Page St. Leon, France 2- In Memoriam—RP 3- In Memoriam—JAW 5- Remembering John Wilcox Statue of 6- Defensive Strategies of two J. H. Fabre Cassidine Larvae. in the garden 7- New Zealand Chrysomelidae of the Fabre 9- Collecting in Sholas Forests Museum, St. 10- Fun With Flea Beetle Feces Leons, France 11- Whither South African Cassidinae Research? 12- Indian Cassidinae Revisited 14- Neochlamisus—Cryptic Speciation? 16- In Memoriam—JGE 16- 17- Fabreries in Fabreland 18- The Duckett Update 18- Chrysomelidists at ESA: 2003 & 2004 Meetings 19- Recent Chrysomelid Literature 21- Email Address List 23- ICE—Phytophaga Symposium 23- Chrysomela Questionnaire See Story page 17 Research Activities and Interests Johan Stenberg (Umeå Univer- Duane McKenna (Harvard Univer- Eduard Petitpierre (Palma de sity, Sweden) Currently working on sity, USA) Currently studying phyloge- Mallorca, Spain) Interested in the cy- coevolutionary interactions between ny, ecological specialization, population togenetics, cytotaxonomy and chromo- the monophagous leaf beetles, Altica structure, and speciation in the genus somal evolution of Palearctic leaf beetles engstroemi and Galerucella tenella, and Cephaloleia. Needs Arescini and especially of chrysomelines. Would like their common host plant Filipendula Cephaloleini in ethanol, especially from to borrow or exchange specimens from ulmaria (meadow sweet) in a Swedish N. Central America and S. America. Western Palearctic areas. Archipelago. Amanda Evans (Harvard University, Maria Lourdes Chamorro-Lacayo Stefano Zoia (Milan, Italy) Inter- USA) Currently working on a phylogeny (University of Minnesota, USA) Cur- ested in Old World Eumolpinae and of Leptinotarsa to study host use evolu- rently a graduate student working on Mediterranean Chrysomelidae (except tion. -
Lathyrus Bijugatus
Fire Effects Information System (FEIS) FEIS Home Page Lathyrus bijugatus Table of Contents SUMMARY INTRODUCTION DISTRIBUTION AND OCCURRENCE BOTANICAL AND ECOLOGICAL CHARACTERISTICS FIRE ECOLOGY AND MANAGEMENT OTHER MANAGEMENT CONSIDERATIONS APPENDIX REFERENCES Figure 1—Drypark pea in flower. Photo by Tara Luna, used with permission. SUMMARY This Species Review summarizes the scientific information that was available on drypark pea as of February 2021. Drypark pea is a rare, leguminous forb that occurs in eastern Washington and Oregon, northern Idaho, and northwestern Montana. Within that distribution, it grows in a broad range of biogeoclimatic zones and elevations. As its common name "drypark pea" suggests, it prefers dry soils and open sites. Drypark pea grows in sagebrush-conifer and sagebrush-grassland transition zones; in ponderosa pine, Douglas-fir, and subalpine fir-Engelmann spruce woodlands and forests; and subalpine fir parklands. In conifer communities, it is most common in open stands. Drypark pea has rhizomes that grow out from its taproot. Its roots host nitrogen-fixing Rhizobium bacteria. Drypark pea regenerates from seed and has a soil-stored seed bank; however, information on seed dispersal, viability, and seedling establishment of drypark pea was not available in the literature. Fire probably top-kills drypark pea, and it likely sprouts from its rhizomes and/or caudex after top-kill; however, these responses are undocumented. Only one study provided information on the response of drypark pea to fire. In ponderosa pine forest in northern Idaho, cover and frequency of drypark pea were similar on unburned plots and plots burned under low or high intensity, when 1 averaged across 3 postfire years. -
Leptidea Reali (Real’S Wood White) in Northern Ireland
The ecology and conservation of Leptidea reali (Real’s Wood White) in Northern Ireland © Neal Warnock Neal Warnock September 2008 11753072 MSc Ecological Management and Conservation Biology, Queen’s University Belfast TABLE OF CONTENTS CONTENTS PAGE NUMBER Acknowledgements…………………………………………………………………….…....i Abstract……………………………………………………………………………………...ii List of tables………………………………………………………………………………...iii List of figures……………………………………………………………………………..... iv 1 Introduction……………………………………………………………….1 1.1 Background……………………………………………………………………...1 1.2 ‘Wood White’ butterflies……………………… ……………………………...2 1.2.1 The ‘sinapis-reali’ complex………………………………………....2 1.2.2 Leptidea reali in Northern Ireland- what we know and what we Don’t know………………………………………………………………….9 1.3 Summary and Aims of study…………………………………………………...12 2 Sites and Methods……………………………………………………….15 2.1 Site locations…………………………………………………………………..15 2.2 Relationships with previous research……………………………………….…16 2.3 Site descriptions............................................................................................…..18 2.3.1 Craigavon Lakes…………………………………………………………18 2.3.2 Oxford Island National Nature Reserve……………………………….....20 2.4 Numbers………………………………………………………………………..23 2.5 Oviposition choice- flight cage experiment……………………………...…….24 2.6 Oviposition preference- field observations…………………………………….24 2.7 Larvae and pupae………………………………………………………………25 2.8 Nectaring preference…………………………………………………..……….25 2.9 Courtship……………………………………………………………………….25 2.10 Species identification…………………………………………………………26 2.11 -
Revised Taxonomy of the Family Rhizobiaceae, and Phylogeny of Mesorhizobia Nodulating Glycyrrhiza Spp
Division of Microbiology and Biotechnology Department of Food and Environmental Sciences University of Helsinki Finland Revised taxonomy of the family Rhizobiaceae, and phylogeny of mesorhizobia nodulating Glycyrrhiza spp. Seyed Abdollah Mousavi Academic Dissertation To be presented, with the permission of the Faculty of Agriculture and Forestry of the University of Helsinki, for public examination in lecture hall 3, Viikki building B, Latokartanonkaari 7, on the 20th of May 2016, at 12 o’clock noon. Helsinki 2016 Supervisor: Professor Kristina Lindström Department of Environmental Sciences University of Helsinki, Finland Pre-examiners: Professor Jaakko Hyvönen Department of Biosciences University of Helsinki, Finland Associate Professor Chang Fu Tian State Key Laboratory of Agrobiotechnology College of Biological Sciences China Agricultural University, China Opponent: Professor J. Peter W. Young Department of Biology University of York, England Cover photo by Kristina Lindström Dissertationes Schola Doctoralis Scientiae Circumiectalis, Alimentariae, Biologicae ISSN 2342-5423 (print) ISSN 2342-5431 (online) ISBN 978-951-51-2111-0 (paperback) ISBN 978-951-51-2112-7 (PDF) Electronic version available at http://ethesis.helsinki.fi/ Unigrafia Helsinki 2016 2 ABSTRACT Studies of the taxonomy of bacteria were initiated in the last quarter of the 19th century when bacteria were classified in six genera placed in four tribes based on their morphological appearance. Since then the taxonomy of bacteria has been revolutionized several times. At present, 30 phyla belong to the domain “Bacteria”, which includes over 9600 species. Unlike many eukaryotes, bacteria lack complex morphological characters and practically phylogenetically informative fossils. It is partly due to these reasons that bacterial taxonomy is complicated. -
Effect of Broad Bean Varieties and Faba Bean Upon Populations Dynamic of Bruchus Rufimanus (Coleoptera: Chrysomelidae: Bruchinae) in Kabylia Region (Algeria)
International Journal of Agricultural Science and Research (IJASR) ISSN(P): 2250-0057; ISSN(E): 2321-0087 Vol. 5, Issue 6, Dec 2015, 79-88 © TJPRC Pvt. Ltd. EFFECT OF BROAD BEAN VARIETIES AND FABA BEAN UPON POPULATIONS DYNAMIC OF BRUCHUS RUFIMANUS (COLEOPTERA: CHRYSOMELIDAE: BRUCHINAE) IN KABYLIA REGION (ALGERIA) MEZANI SAMIR, KHELFANE-GOUCEM KARIMA & MEDJDOUB-BENSAAD FERROUDJA Biology Department, Mouloud Mammeri University, Tizi-Ouzou, Algeria ABSTRACT The present study aimed to examine the process and conditions of broad bean Bruchid B. rufimanus infestation in the field in Kabylia region (Algeria). B. rufimanus adults colonized progressively the cultures of Aguadulce variety and faba bean at the beginning of the flowering period, while it colonized Seville variety culture during the flowering period. This colonization seemed to depend upon climatic factors and host plant phenology. The presence of adults in plots spanned about 5 weeks for Aguadulce variety, 6 for faba bean and 4 weeks for Seville variety. At the end of the flowering period, the number of adults decreased whereas the number of mature pods increased for all plots. The egg-laying was spread over a period of approximately 8 and 7 weeks for Aguadulce and Seville varieties respectively and 6 for faba bean. Females seemed Article Original to deposit their eggs randomly on the available young pods and old pods of each host. Our results showed also that the varieties act significantly on the rate of infestation by B. rufimanus females on V. faba plots studied. KEYWORDS: Vicia Faba, Bruchus Rufimanus, Egg-Laying, Varieties, Host Plant Colonization, Kabylia Region Received: Oct 06, 2015; Accepted: Oct 19, 2015; Published: Oct 27, 2015; Paper Id.: IJASRDEC201511 INTRODUCTION Bean or faba bean ( Vicia faba Linné) is a most cultivated Leguminosae seeds for human consumption in the Maghreb (Kharrat and al., 2002). -
A Remarkable New Species Group of Green Seed Beetles from Genus Amblycerus Thunberg (Coleoptera, Chrysomelidae, Bruchinae), With
A peer-reviewed open-access journal ZooKeys 401:A remarkable 31–44 (2014) new species group of green seed beetles from genus Amblycerus Thunberg... 31 doi: 10.3897/zookeys.401.6232 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research A remarkable new species group of green seed beetles from genus Amblycerus Thunberg (Coleoptera, Chrysomelidae, Bruchinae), with description of a new Brazilian species Cibele Stramare Ribeiro-Costa1,†, Marcelli Krul Vieira1,‡, Daiara Manfio1,§, Gael J. Kergoat2,| 1 Laboratório de Sistemática e Bioecologia de Coleoptera, Departamento de Zoologia, Universidade Federal do Paraná, Caixa Postal 19020, 81531-980, Curitiba, Paraná, Brasil 2 INRA-UMR CBGP (INRA/IRD/Cirad, Montpellier SupAgro), Campus International de Baillarguet, CS 30016, F-34988 Montferrier-sur-Lez, France † http://zoobank.org/1FCBEC2D-0ECE-4863-A9B6-C280193CA320 ‡ http://zoobank.org/D1A89771-1AE1-4C5F-97A7-CAAE15DDF45E § http://zoobank.org/78128EF8-4D20-4EDA-9070-68B63DAB9495 | http://zoobank.org/D763F7EC-A1C9-45FF-88FB-408E3953F9A8 Corresponding author: Daiara Manfio ([email protected]) Academic editor: A. Konstantinov | Received 11 September 2013 | Accepted 24 March 2014 | Published 14 April 2014 http://zoobank.org/CA1101BF-E333-4DD6-80C1-AFA340B3CBE3 Citation: Ribeiro-Costa CS, Vieira MK, Manfio, DKergoat GJ (2014) A remarkable new species group of green seed beetles from genus Amblycerus Thunberg (Coleoptera, Chrysomelidae, Bruchinae), with description of a new Brazilian species. ZooKeys 401: 31–44. doi: 10.3897/zookeys.401.6232 Abstract Representatives of the subfamily Bruchinae (Coleoptera: Chrysomelidae) are usually small and inconspic- uous, with only a few species drawing the attention. Here we deal with several unusually colored species of Amblycerus Thunberg, 1815, one of the two most diverse bruchine genera in the Western hemisphere. -
Atlas of the Flora of New England: Fabaceae
Angelo, R. and D.E. Boufford. 2013. Atlas of the flora of New England: Fabaceae. Phytoneuron 2013-2: 1–15 + map pages 1– 21. Published 9 January 2013. ISSN 2153 733X ATLAS OF THE FLORA OF NEW ENGLAND: FABACEAE RAY ANGELO1 and DAVID E. BOUFFORD2 Harvard University Herbaria 22 Divinity Avenue Cambridge, Massachusetts 02138-2020 [email protected] [email protected] ABSTRACT Dot maps are provided to depict the distribution at the county level of the taxa of Magnoliophyta: Fabaceae growing outside of cultivation in the six New England states of the northeastern United States. The maps treat 172 taxa (species, subspecies, varieties, and hybrids, but not forms) based primarily on specimens in the major herbaria of Maine, New Hampshire, Vermont, Massachusetts, Rhode Island, and Connecticut, with most data derived from the holdings of the New England Botanical Club Herbarium (NEBC). Brief synonymy (to account for names used in standard manuals and floras for the area and on herbarium specimens), habitat, chromosome information, and common names are also provided. KEY WORDS: flora, New England, atlas, distribution, Fabaceae This article is the eleventh in a series (Angelo & Boufford 1996, 1998, 2000, 2007, 2010, 2011a, 2011b, 2012a, 2012b, 2012c) that presents the distributions of the vascular flora of New England in the form of dot distribution maps at the county level (Figure 1). Seven more articles are planned. The atlas is posted on the internet at http://neatlas.org, where it will be updated as new information becomes available. This project encompasses all vascular plants (lycophytes, pteridophytes and spermatophytes) at the rank of species, subspecies, and variety growing independent of cultivation in the six New England states. -
An Annotated Bibliography of Archaeoentomology
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Distance Master of Science in Entomology Projects Entomology, Department of 4-2020 An Annotated Bibliography of Archaeoentomology Diana Gallagher Follow this and additional works at: https://digitalcommons.unl.edu/entodistmasters Part of the Entomology Commons This Thesis is brought to you for free and open access by the Entomology, Department of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Distance Master of Science in Entomology Projects by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Diana Gallagher Master’s Project for the M.S. in Entomology An Annotated Bibliography of Archaeoentomology April 2020 Introduction For my Master’s Degree Project, I have undertaken to compile an annotated bibliography of a selection of the current literature on archaeoentomology. While not exhaustive by any means, it is designed to cover the main topics of interest to entomologists and archaeologists working in this odd, dark corner at the intersection of these two disciplines. I have found many obscure works but some publications are not available without a trip to the Royal Society’s library in London or the expenditure of far more funds than I can justify. Still, the goal is to provide in one place, a list, as comprehensive as possible, of the scholarly literature available to a researcher in this area. The main categories are broad but cover the most important subareas of the discipline. Full books are far out-numbered by book chapters and journal articles, although Harry Kenward, well represented here, will be publishing a book in June of 2020 on archaeoentomology. -
Este Trabalho Não Teria Sido Possível Sem O Contributo De Algumas Pessoas Para As Quais Uma Palavra De Agradecimento É Insufi
AGRADECIMENTOS Este trabalho não teria sido possível sem o contributo de algumas pessoas para as quais uma palavra de agradecimento é insuficiente para aquilo que representaram nesta tão importante etapa. O meu mais sincero obrigado, Ao Nuno e à minha filha Constança, pelo apoio, compreensão e estímulo que sempre me deram. Aos meus pais, Gaspar e Fátima, por toda a força e apoio. Aos meus orientadores da Dissertação de Mestrado, Professor Doutor António Xavier Pereira Coutinho e Doutora Catarina Schreck Reis, a quem eu agradeço todo o empenho, paciência, disponibilidade, compreensão e dedicação que por mim revelaram ao longo destes meses. À Doutora Palmira Carvalho, do Museu Nacional de História Natural/Jardim Botânico da Universidade de Lisboa por todo o apoio prestado na identificação e reconhecimento dos líquenes recolhidos na mata. Ao Senhor Arménio de Matos, funcionário do Jardim Botânico da Universidade de Coimbra, por todas as vezes que me ajudou na identificação de alguns espécimes vegetais. Aos meus colegas e amigos, pela troca de ideias, pelas explicações, pela força, apoio logístico, etc. I ÍNDICE RESUMO V ABSTRACT VI I. INTRODUÇÃO 1.1. Enquadramento 1 1.2. O clima mediterrânico e a vegetação 1 1.3. Origens da vegetação portuguesa 3 1.4. Objetivos da tese 6 1.5. Estrutura da tese 7 II. A SANTA CASA DA MISERICÓRDIA DE ARGANIL E A MATA DO HOSPITAL 2.1. Breve perspetiva histórica 8 2.2. A Mata do Hospital 8 2.2.1. Localização, limites e vias de acesso 8 2.2.2. Fatores Edafo-Climáticos-Hidrológicos 9 2.2.3. -
Fort Ord Natural Reserve Plant List
UCSC Fort Ord Natural Reserve Plants Below is the most recently updated plant list for UCSC Fort Ord Natural Reserve. * non-native taxon ? presence in question Listed Species Information: CNPS Listed - as designated by the California Rare Plant Ranks (formerly known as CNPS Lists). More information at http://www.cnps.org/cnps/rareplants/ranking.php Cal IPC Listed - an inventory that categorizes exotic and invasive plants as High, Moderate, or Limited, reflecting the level of each species' negative ecological impact in California. More information at http://www.cal-ipc.org More information about Federal and State threatened and endangered species listings can be found at https://www.fws.gov/endangered/ (US) and http://www.dfg.ca.gov/wildlife/nongame/ t_e_spp/ (CA). FAMILY NAME SCIENTIFIC NAME COMMON NAME LISTED Ferns AZOLLACEAE - Mosquito Fern American water fern, mosquito fern, Family Azolla filiculoides ? Mosquito fern, Pacific mosquitofern DENNSTAEDTIACEAE - Bracken Hairy brackenfern, Western bracken Family Pteridium aquilinum var. pubescens fern DRYOPTERIDACEAE - Shield or California wood fern, Coastal wood wood fern family Dryopteris arguta fern, Shield fern Common horsetail rush, Common horsetail, field horsetail, Field EQUISETACEAE - Horsetail Family Equisetum arvense horsetail Equisetum telmateia ssp. braunii Giant horse tail, Giant horsetail Pentagramma triangularis ssp. PTERIDACEAE - Brake Family triangularis Gold back fern Gymnosperms CUPRESSACEAE - Cypress Family Hesperocyparis macrocarpa Monterey cypress CNPS - 1B.2, Cal IPC