Fieldtrip Manual for Plant Biodiversity
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What Is a Tree in the Mediterranean Basin Hotspot? a Critical Analysis
Médail et al. Forest Ecosystems (2019) 6:17 https://doi.org/10.1186/s40663-019-0170-6 RESEARCH Open Access What is a tree in the Mediterranean Basin hotspot? A critical analysis Frédéric Médail1* , Anne-Christine Monnet1, Daniel Pavon1, Toni Nikolic2, Panayotis Dimopoulos3, Gianluigi Bacchetta4, Juan Arroyo5, Zoltán Barina6, Marwan Cheikh Albassatneh7, Gianniantonio Domina8, Bruno Fady9, Vlado Matevski10, Stephen Mifsud11 and Agathe Leriche1 Abstract Background: Tree species represent 20% of the vascular plant species worldwide and they play a crucial role in the global functioning of the biosphere. The Mediterranean Basin is one of the 36 world biodiversity hotspots, and it is estimated that forests covered 82% of the landscape before the first human impacts, thousands of years ago. However, the spatial distribution of the Mediterranean biodiversity is still imperfectly known, and a focus on tree species constitutes a key issue for understanding forest functioning and develop conservation strategies. Methods: We provide the first comprehensive checklist of all native tree taxa (species and subspecies) present in the Mediterranean-European region (from Portugal to Cyprus). We identified some cases of woody species difficult to categorize as trees that we further called “cryptic trees”. We collected the occurrences of tree taxa by “administrative regions”, i.e. country or large island, and by biogeographical provinces. We studied the species-area relationship, and evaluated the conservation issues for threatened taxa following IUCN criteria. Results: We identified 245 tree taxa that included 210 species and 35 subspecies, belonging to 33 families and 64 genera. It included 46 endemic tree taxa (30 species and 16 subspecies), mainly distributed within a single biogeographical unit. -
Notes Oak News
THE NEWSLETTER OF THE INTERNATIONAL OAK SOCIETY&, VOLUME 16, NO. 1, WINTER 2012 Greek OakOak Open Days: News September 26 - October Notes 2, 2011 From the 21st century CE to the 2nd century—BCE! The next morning early we met our large tour bus and its charming and skillful driver, Grigoris, who hails from the mountain village of Gardiki not far from here. We did a bit of leisurely botanizing before we reached Perdika, our first destination of the day. There are two reasons to visit Perdika: one is the Karavostasi beach, a curving strand with golden sand, and the archaeological site of Dymokastron, a Hellenis- tic mountain-top town reached by a steep hike. The view of the beach far below was beautiful, as it must have been when the town was still inhabited. The town was destroyed in 167 BCE by a Roman army, along with most of the other towns in the vicinity, all allied with Rome’s enemy, Macedonia. The site is under active excavation, and we were able to admire the remnants of protective walls (how in the world did they get those big stones up there?), building foundations, and cisterns, which were certainly needed in case of a prolonged siege, Some members of the IOS Greek tour relaxing under the plane tree in the which Dymocastron must have experienced more than once. village square. Vitsa, Epirus, Greece. (Photo: Gert Dessoy) The site also has many living trees, including wild pears (Py- rus spinosa Vill., also known as P. amygdaliformis Vill.) and uring this early autumn week of incomparable weather, figs (Ficus carica L.) which appear to be descendants of wild Dtwelve members of the IOS, and three others who were native trees selected by the original inhabitants, as well as guests, enjoyed a truly memorable time in northern Greece. -
Large‐Scale Genomic Sequence Data Resolve the Deepest Divergences in the Legume Phylogeny and Support a Near‐Simultaneous Evolutionary Origin of All Six Subfamilies
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2020 Large‐scale genomic sequence data resolve the deepest divergences in the legume phylogeny and support a near‐simultaneous evolutionary origin of all six subfamilies Koenen, Erik J M ; Ojeda, Dario I ; Steeves, Royce ; Migliore, Jérémy ; Bakker, Freek T ; Wieringa, Jan J ; Kidner, Catherine ; Hardy, Olivier J ; Pennington, R Toby ; Bruneau, Anne ; Hughes, Colin E Abstract: Phylogenomics is increasingly used to infer deep‐branching relationships while revealing the complexity of evolutionary processes such as incomplete lineage sorting, hybridization/introgression and polyploidization. We investigate the deep‐branching relationships among subfamilies of the Leguminosae (or Fabaceae), the third largest angiosperm family. Despite their ecological and economic importance, a robust phylogenetic framework for legumes based on genome‐scale sequence data is lacking. We generated alignments of 72 chloroplast genes and 7621 homologous nuclear‐encoded proteins, for 157 and 76 taxa, respectively. We analysed these with maximum likelihood, Bayesian inference, and a multispecies coa- lescent summary method, and evaluated support for alternative topologies across gene trees. We resolve the deepest divergences in the legume phylogeny despite lack of phylogenetic signal across all chloroplast genes and the majority of nuclear genes. Strongly supported conflict in the remainder of nuclear genes is suggestive of incomplete lineage sorting. All six subfamilies originated nearly simultaneously, suggesting that the prevailing view of some subfamilies as ‘basal’ or ‘early‐diverging’ with respect to others should be abandoned, which has important implications for understanding the evolution of legume diversity and traits. -
Revised Taxonomy of the Family Rhizobiaceae, and Phylogeny of Mesorhizobia Nodulating Glycyrrhiza Spp
Division of Microbiology and Biotechnology Department of Food and Environmental Sciences University of Helsinki Finland Revised taxonomy of the family Rhizobiaceae, and phylogeny of mesorhizobia nodulating Glycyrrhiza spp. Seyed Abdollah Mousavi Academic Dissertation To be presented, with the permission of the Faculty of Agriculture and Forestry of the University of Helsinki, for public examination in lecture hall 3, Viikki building B, Latokartanonkaari 7, on the 20th of May 2016, at 12 o’clock noon. Helsinki 2016 Supervisor: Professor Kristina Lindström Department of Environmental Sciences University of Helsinki, Finland Pre-examiners: Professor Jaakko Hyvönen Department of Biosciences University of Helsinki, Finland Associate Professor Chang Fu Tian State Key Laboratory of Agrobiotechnology College of Biological Sciences China Agricultural University, China Opponent: Professor J. Peter W. Young Department of Biology University of York, England Cover photo by Kristina Lindström Dissertationes Schola Doctoralis Scientiae Circumiectalis, Alimentariae, Biologicae ISSN 2342-5423 (print) ISSN 2342-5431 (online) ISBN 978-951-51-2111-0 (paperback) ISBN 978-951-51-2112-7 (PDF) Electronic version available at http://ethesis.helsinki.fi/ Unigrafia Helsinki 2016 2 ABSTRACT Studies of the taxonomy of bacteria were initiated in the last quarter of the 19th century when bacteria were classified in six genera placed in four tribes based on their morphological appearance. Since then the taxonomy of bacteria has been revolutionized several times. At present, 30 phyla belong to the domain “Bacteria”, which includes over 9600 species. Unlike many eukaryotes, bacteria lack complex morphological characters and practically phylogenetically informative fossils. It is partly due to these reasons that bacterial taxonomy is complicated. -
Plant Community Structure and Diversity Under Grazing Gradient in Arid Mediterranean Steppe of Algeria
Journal of Materials and J. Mater. Environ. Sci., 2017, Volume 8, Issue 12, Page 4329-4338 Environmental Sciences ISSN : 2028-2508 http://www.jmaterenvironsci.com / http://www.jmaterenvironsci.com/ Copyright © 2017, Plant community structure and diversity under grazing gradient in arid Mediterranean steppe of Algeria 1,2* 1 2 2 S. Merdas , A. Menad ,T. Mostephaoui , B. Sakaa 1Laboratory of biology and environment, Department of Biology and Ecology, Mentouri Brothers University - Constantine, Ain El Bey, 25017 Constantine, Algeria 2 Centre of scientific and technical research on arid regions, BP n° 1682 R.P 07000 Biskra –Algeria Abstract Received 21 Jul 2016, Revised 13 Nov 2016, Desertification is a worldwide concern; in Algeria, land degradation threats more than 20 million of steppe rangelands. Protection from grazing is a technique widely used as a Accepted 16 Nov 2016 management tool for the development of the steppes. The aim of this study is to investigate the effect of grazing on plant community structure and diversity. We Keywords conducted a comparative study of the plant community structure and diversity in grazed Degradation, and ungrazed areas. We assessed soil surface conditions; vegetation, litter, bare ground, diversity, biological soil crusts and Stipa tenacissima cover. In addition, we quantified plant grazing, species diversity using species richness, Shannon diversity index, Simpson index and protection, Evenness. Our results showed that grazing activities have largely reduced values of the conservation, vegetation cover and diversity in grazed areas. In addition, grazing activities affected arid Mediterranean plant community assemblages. The cover of the most dominant species (Stipa steppe. tenacissima), was not affected by grazing. -
Towards an Updated Checklist of the Libyan Flora
Towards an updated checklist of the Libyan flora Article Published Version Creative Commons: Attribution 3.0 (CC-BY) Open access Gawhari, A. M. H., Jury, S. L. and Culham, A. (2018) Towards an updated checklist of the Libyan flora. Phytotaxa, 338 (1). pp. 1-16. ISSN 1179-3155 doi: https://doi.org/10.11646/phytotaxa.338.1.1 Available at http://centaur.reading.ac.uk/76559/ It is advisable to refer to the publisher’s version if you intend to cite from the work. See Guidance on citing . Published version at: http://dx.doi.org/10.11646/phytotaxa.338.1.1 Identification Number/DOI: https://doi.org/10.11646/phytotaxa.338.1.1 <https://doi.org/10.11646/phytotaxa.338.1.1> Publisher: Magnolia Press All outputs in CentAUR are protected by Intellectual Property Rights law, including copyright law. Copyright and IPR is retained by the creators or other copyright holders. Terms and conditions for use of this material are defined in the End User Agreement . www.reading.ac.uk/centaur CentAUR Central Archive at the University of Reading Reading’s research outputs online Phytotaxa 338 (1): 001–016 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2018 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.338.1.1 Towards an updated checklist of the Libyan flora AHMED M. H. GAWHARI1, 2, STEPHEN L. JURY 2 & ALASTAIR CULHAM 2 1 Botany Department, Cyrenaica Herbarium, Faculty of Sciences, University of Benghazi, Benghazi, Libya E-mail: [email protected] 2 University of Reading Herbarium, The Harborne Building, School of Biological Sciences, University of Reading, Whiteknights, Read- ing, RG6 6AS, U.K. -
The Scale Insects (Hemiptera: Coccoidea) of Oak Trees (Fagaceae: Quercus Spp.) in Israel
ISRAEL JOURNAL OF ENTOMOLOGY, Vol. 43, 2013, pp. 95-124 The scale insects (Hemiptera: Coccoidea) of oak trees (Fagaceae: Quercus spp.) in Israel MALKIE SPODEK1,2, YAIR BEN-DOV1 AND ZVI MENDEL1 1Department of Entomology, Volcani Center, Agricultural Research Organization, POB 6, Bet Dagan 50250, Israel 2Department of Entomology, Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, POB 12, Rehovot 76100, Israel Email: [email protected] ABSTRACT Scale insects (Hemiptera: Coccoidea) of four species of oaks (Fagaceae: Quercus) in Israel namely, Q. boissieri, Q. calliprinos, Q. ithaburensis, and Q. look were collected and identified from natural forest stands during the period 2010-2013. A total of twenty-seven species were determined from nine scale insect families: Asterolecaniidae (3 species), Coccidae (3), Di- aspididae (7), Eriococcidae (3), Kermesidae (6), Kuwaniidae (1), Mono- phlebidae (1), Pseudococcidae (2), and Putoidae (1). Six of these species represent new records for Israel and five are identified to the genus level. Kuwaniidae is a new family record for Israel. Species that were previously collected or recorded on oaks in Israel are listed and discussed. Information is given about host trees and global distribution. The majority of the spe- cies reported here are monophagous or stenophagous and they appear to be non-pestiferous to the oak trees in Israel. General traits that describe each scale insect family in the field are provided, together with an identification key to aid in the determination of slide-mounted specimens into families represented in this study. KEY WORDS: Scale insect, Coccoidea, oak trees, Quercus, forest, survey, monophagous, univoltine, Mediterranean, Israel INTRODUCTION The genus Quercus (Fagaceae) has a rich and diverse arthropod fauna associated with it (Southwood, 1961; Southwood et al., 2005). -
Ecological and Genetic Analysis of Plant-Animal Interactions in Mediterranean Environments
UNIVERSIDAD DE MURCIA ESCUELA INTERNACIONAL DE DOCTORADO Ecological and Genetic Analysis of Plant-Animal Interactions in Mediterranean Environments Análisis Ecológico y Genético de Interacciones Planta-Animal en Ambientes Mediterráneos D. Vicente Martínez López 2018 Ecological and genetic analysis of plant-animal interactions in Mediterranean environments Análisis ecológico y genético de interacciones planta-animal en ambientes mediterráneos Tesis Doctoral Vicente Martínez López 2018 Escuela Internacional de Doctorado de la Universidad de Murcia (EIDUM) Universidad de Murcia Directores: Dra. Mª Pilar De la Rúa Tarín Dr. Francisco Robledano Aymerich Con el apoyo de (support): Esta tesis ha sido realizada en los Departamentos de Zoología y Antropología Física y Ecología e Hidrología de la Universidad de Murcia bajo de dirección de los doctores Mª Pilar De la Rúa Tarín y Francisco Robledano Aymerich. El autor ha sido beneficiario de un Contrato Predoctoral para la Formación del Profesorado Universitario (FPU) del Ministerio de Educación, Cultura y Deporte (referencia FPU 13/05115). Además ha realizado dos estancias predoctorales de tres meses de duración cada una financiada también por el Ministerio de Educación, Cultura y Deporte en régimen de concurrencia competitiva en la Universidad de Marburg (Alemania), supervisado por la Dra. Nina Farwig, y en CIBIO/InBIO (Universidad de Oporto, Portugal), supervisado por la Dra. Cristina García. Las investigaciones realizadas en el presente trabajo han recibido financiación de los proyectos de la -
Characterization of the Wild Trees and Shrubs in the Egyptian Flora
10 Egypt. J. Bot. Vol. 60, No. 1, pp. 147-168 (2020) Egyptian Journal of Botany http://ejbo.journals.ekb.eg/ Characterization of the Wild Trees and Shrubs in the Egyptian Flora Heba Bedair#, Kamal Shaltout, Dalia Ahmed, Ahmed Sharaf El-Din, Ragab El- Fahhar Botany Department, Faculty of Science, Tanta University, 31527, Tanta, Egypt. HE present study aims to study the floristic characteristics of the native trees and shrubs T(with height ≥50cm) in the Egyptian flora. The floristic characteristics include taxonomic diversity, life and sex forms, flowering activity, dispersal types,economic potential, threats and national and global floristic distributions. Nine field visits were conducted to many locations all over Egypt for collecting trees and shrubs. From each location, plant and seed specimens were collected from different habitats. In present study 228 taxa belonged to 126 genera and 45 families were recorded, including 2 endemics (Rosa arabica and Origanum syriacum subsp. sinaicum) and 5 near-endemics. They inhabit 14 habitats (8 natural and 6 anthropogenic). Phanerophytes (120 plants) are the most represented life form, followed by chamaephytes (100 plants). Bisexuals are the most represented. Sarcochores (74 taxa) are the most represented dispersal type, followed by ballochores (40 taxa). April (151 taxa) and March (149 taxa) have the maximum flowering plants. Small geographic range - narrow habitat - non abundant plants are the most represented rarity form (180 plants). Deserts are the most rich regions with trees and shrubs (127 taxa), while Sudano-Zambezian (107 taxa) and Saharo-Arabian (98 taxa) was the most. Medicinal plants (154 taxa) are the most represented good, while salinity tolerance (105 taxa) was the most represented service and over-collecting and over-cutting was the most represented threat. -
Coastal Moonah Woodland in Victoria
A field guide to Coastal Moonah Woodland in Victoria A Victorian Government A Victorianinitiative Government initiative A field guide to Coastal Moonah Woodland in Victoria By Claire Moxham, Vivienne Turner, Gidja Walker and Imelda Douglas ISBN:978-1-74242-642-6 (print) ISBN: 978-1-74242-642-3 (on-line) © The State of Victoria, Department of Sustainability and Environment, 2010 This publication is copyright. Apart from any fair dealing for private study, research, criticism or review allowed under the Copyright Act 1968, no part of this publication may be reproduced, stored in a retrieval system or transmitted in any forms or by any means, electronic, photocopying or other, without the prior permission of the copyright holder. Published by the Victorian Government Department of Sustainability and Environment Melbourne, October 2010 Disclaimer: This publication may be of assistance to you but the State of Victoria and its employees do not guarantee that the publication is without flaw of any kind or is wholly appropriate for your particular purposes and therefore disclaims all liability for any error, loss or other consequence, which may arise from you relying on any information in this publication. This publication may be cited as: Citation: Moxham C., Turner V., Walker G. and Douglas I. (2010) A field guide to Coastal Moonah Woodland in Victoria. Arthur Rylah Institute for Environmental Research, Department of Sustainability and Environment, Melbourne. Front cover photo: Moonah (Melaleuca lanceolata subsp. lanceolata) by Claire Moxham Purpose This field guide provides information on the identification, ecology and management of Coastal Moonah Woodland (CMW) for use by land managers and naturalists. -
Introduced Weed Species
coastline Garden Plants that are Known to Become Serious Coastal Weeds SOUTH AUSTRALIAN COAST PROTECTION BOARD No 34 September 2003 GARDEN PLANTS THAT HAVE BECOME Vegetation communities that originally had a diverse SERIOUS COASTAL WEEDS structure are transformed to a simplified state where Sadly, our beautiful coastal environment is under threat one or several weeds dominate. Weeds aggressively from plants that are escaping from gardens and compete with native species for resources such as becoming serious coastal weeds. Garden escapees sunlight, nutrients, space, water, and pollinators. The account for some of the most damaging environmental regeneration of native plants is inhibited once weeds are weeds in Australia. Weeds are a major environmental established, causing biodiversity to be reduced. problem facing our coastline, threatening biodiversity and the preservation of native flora and fauna. This Furthermore, native animals and insects are significantly edition of Coastline addresses a selection of common affected by the loss of indigenous plants which they rely garden plants that are having significant impacts on our on for food, breeding and shelter. They are also affected coastal bushland. by exotic animals that prosper in response to altered conditions. WHAT ARE WEEDS? Weeds are plants that grow where they are not wanted. Weeds require costly management programs and divert In bushland they out compete native plants that are then resources from other coastal issues. They can modify excluded from their habitat. Weeds are not always from the soil and significantly alter dune landscapes. overseas but also include native plants from other regions in Australia. HOW ARE WEEDS INTRODUCED AND SPREAD? WEEDS INVADE OUR COASTLINE… Weeds are introduced into the natural environment in a Unfortunately, introduced species form a significant variety of ways. -
Marina Murillo Torres
Facultad de Biología Departamento de Microbiología Grado en Biología Implicación de las N-acil homoserina lactonas en el fenotipo y las propiedades simbióticas de Ensifer meliloti SVQ747 y su mutante en el sistema RND NolG Trabajo de Fin de Grado Marina Murillo Torres Tutora: María del Rosario Espuny Gómez Codirectora: Cynthia Victoria Alías Villegas Sevilla, junio de 2020 ÍNDICE Resumen ........................................................................................................................... 1 Introducción ..................................................................................................................... 1 Objetivos ........................................................................................................................... 6 Materiales y métodos ....................................................................................................... 7 Bacterias, medios y condiciones de cultivo ................................................................... 7 Obtención de estirpes portadoras de los plásmidos pME6000 y pME6863 .................. 9 Métodos utilizados en el estudio de las bacterias ........................................................ 10 Ensayo de difusión en placa para determinar la producción de AHL ................. 10 Movilidad, morfología de las colonias y producción de EPS .............................. 11 Métodos utilizados para los estudios con alfalfa (Medicago sativa cv. Aragón) ........ 11 Desinfección y germinación de semillas ............................................................