Interactions of Cryptococcus Neoformans with Host Phagocytes
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Clemson University TigerPrints All Dissertations Dissertations December 2019 Role of Cryptococcus neoformans Pyruvate Decarboxylase and Aldehyde Dehydrogenase Enzymes in Acetate Production and Virulence Mufida Ahmed Nagi Ammar Clemson University, [email protected] Follow this and additional works at: https://tigerprints.clemson.edu/all_dissertations Recommended Citation Ammar, Mufida Ahmed Nagi, "Role of Cryptococcus neoformans Pyruvate Decarboxylase and Aldehyde Dehydrogenase Enzymes in Acetate Production and Virulence" (2019). All Dissertations. 2488. https://tigerprints.clemson.edu/all_dissertations/2488 This Dissertation is brought to you for free and open access by the Dissertations at TigerPrints. It has been accepted for inclusion in All Dissertations by an authorized administrator of TigerPrints. For more information, please contact [email protected]. Role of Cryptococcus neoformans Pyruvate Decarboxylase and Aldehyde Dehydrogenase Enzymes in Acetate Production and Virulence A Dissertation Presented to the Graduate School of Clemson University In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy Biochemistry and Molecular Biology by Mufida Ahmed Nagi Ammar December 2019 Accepted by: Dr. Kerry Smith, Committee Chair Dr. Julia Frugoli Dr. Cheryl Ingram-Smith Dr. Lukasz Kozubowski ABSTRACT The basidiomycete Cryptococcus neoformans is is an invasive opportunistic pathogen of the central nervous system and the most frequent cause of fungal meningitis. C. neoformans enters the host by inhalation and protects itself from immune assault in the lungs by producing hydrolytic enzymes, immunosuppressants, and other virulence factors. C. neoformans also adapts to the environment inside the host, including producing metabolites that may confer survival advantages. One of these, acetate, can be kept in reserve as a carbon source or can be used to weaken the immune response by lowering local pH or as a key part of immunomodulatory molecules. -
Idiopathic CD4 Lymphocytopenia: Spectrum of Opportunistic Infections, Malignancies, and Autoimmune Diseases
Published online: 2021-08-09 REVIEW ARTICLE Idiopathic CD4 Lymphocytopenia: Spectrum of opportunistic infections, malignancies, and autoimmune diseases Dina S. Ahmad, Mohammad Esmadi, William C. Steinmann Department of Internal Medicine, University of Missouri School of Medicine, Columbia, MO, USA Access this article online ABSTRACT Website: www.avicennajmed.com DOI: 10.4103/2231-0770.114121 Idiopathic CD4 lymphocytopenia (ICL) was first defined in 1992 by the US Centers for Disease Quick Response Code: Control and Prevention (CDC) as the repeated presence of a CD4+ T lymphocyte count of fewer than 300 cells per cubic millimeter or of less than 20% of total T cells with no evidence of human immunodeficiency virus (HIV) infection and no condition that might cause depressed CD4 counts. Most of our knowledge about ICL comes from scattered case reports. The aim of this study was to collect comprehensive data from the previously published cases to understand the characteristics of this rare condition. We searched the PubMed database and Science Direct for case reports since 1989 for Idiopathic CD4 lymphocytopenia cases. We found 258 cases diagnosed with ICL in 143 published papers. We collected data about age, sex, pathogens, site of infections, CD4 count, CD8 count, CD4:CD8 ratio, presence of HIV risk factors, malignancies, autoimmune diseases and whether the patients survived or died. The mean age at diagnosis of first opportunistic infection (or ICL if no opportunistic infection reported) was 40.7 ± 19.2 years (standard deviation), with a range of 1 to 85. One-sixty (62%) patients were males, 91 (35.2%) were females, and 7 (2.7%) patients were not identified whether males or females. -
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Copyright Ó 2010 by the Genetics Society of America DOI: 10.1534/genetics.109.113027 A Tetrad Analysis of the Basidiomycete Fungus Cryptococcus neoformans Alexander Idnurm Division of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri-Kansas City, Kansas City, Missouri 64110 Manuscript received December 10, 2009 Accepted for publication February 9, 2010 ABSTRACT Cryptococcus neoformans is a basidiomycete fungus that is found worldwide and causes disease in humans and animal species. The fungus grows asexually as a budding yeast. Under laboratory conditions it is capable of sexual reproduction between two mating types. After cell fusion a dikaryotic filament develops, at the tip of which a basidium gives rise to four chains of basidiospores. Because the chains each comprise 10–30 spores, rather than single spores, the analysis of individual meiotic events has not been attempted in C. neoformans in the style of tetrad analyses performed in other fungal species. Here, the basidiospores from .100 basidia were micromanipulated and the resultant .2500 progeny analyzed for three genetic markers to understand the sexual process in this fungus, leading to four observations: (i) Marker seg- regation provides genetic evidence for a single meiotic event within the basidium followed by multiple rounds of mitosis. (ii) Using each basidium as an unordered tetrad, the ADE2 and URA5 genes are linked to their centromeres, consistent with adjacent genomic regions rich in repetitive elements predicted to comprise Cryptococcus centromeres. (iii) Lack of germination of basidiospores is attributed to aneuploidy, rather than dormancy. (iv) Analysis of basidiospores derived from single chains demonstrates that each chain can contain different genotypes. -
Product Sheet Info
Product Information Sheet for NR-50430 Cryptococcus gattii, Strain C10 Propagation: 1. Keep vial frozen until ready for use; thaw rapidly. Catalog No. NR-50430 2. Inoculate an agar plate with approximately 50 µL of thawed culture and/or transfer the entire thawed aliquot into a single tube of broth For research use only. Not for human use. 3. Incubate the plate and/or tube at 25°C for 2 to 4 days. Contributor: Citation: Brian Wong, M.D., Professor, and Igor Bruzual, Ph.D., Acknowledgment for publications should read “The following Infectious Disease Division, Department of Medicine, Oregon reagent was obtained through BEI Resources, NIAID, NIH: Health and Science University, Portland, Oregon, USA Cryptococcus gattii, Strain C10, NR-50430.” Manufacturer: Biosafety Level: 2 BEI Resources Appropriate safety procedures should always be used with this material. Laboratory safety is discussed in the following Product Description: publication: U.S. Department of Health and Human Services, Classification: Tremellaceae, Cryptococcus Public Health Service, Centers for Disease Control and Species: Cryptococcus gattii Prevention, and National Institutes of Health. Biosafety in Strain: C10 Microbiological and Biomedical Laboratories. 5th ed. Original Source: Cryptococcus gattii (C. gattii), strain C10 Washington, DC: U.S. Government Printing Office, 2009; see was isolated from an unknown human source in the Pacific www.cdc.gov/biosafety/publications/bmbl5/index.htm. Northwest region of North America.1 Comments: C. gattii, strain C10 was deposited as lineage Disclaimers: VGIIa and resistant to azoles.1 You are authorized to use this product for research use only. The Cryptococcus species complex is comprised of four It is not intended for human use. -
Cryptococcus Gattii Outbreak
The recent Cryptococcus gattii outbreak A deadly pathway… From Trees to Lungs to Brain ryptococcus gattii disease. The route of C has been in the infection is from breathing the news lately, due to a recent airborne organism, which outbreak in the Pacific becomes lodged in the Northwest. This new, more pulmonary tissues. virulent strain is expected to by Jay Hardy, CLS, SM (NRCM) spread further throughout the Symptoms Northwest and Northern California in the coming The pulmonary disease, Jay Hardy is the founder and months. known as cpryptococcosis, president of Hardy Diagnostics. develops slowly. After He began his career in exposure it can take two to microbiology as a Medical Technologist in Santa Barbara, twelve months for symptoms California. to appear, with the usual onset In 1980, he began at six or seven months. manufacturing culture media for the local hospitals. Today, The symptoms include: Hardy Diagnostics is the third largest media manufacturer in the U.S. • Cough that lasts weeks or months To ensure rapid and reliable turn around time, Hardy • Sharp chest pain Figure 1: An India ink stain Diagnostics maintains six • Unexplained shortness of showing the capsule surrounding distribution centers, and breath produces over 3,000 products the C. gattii cells in the yeast form used in clinical and industrial at 1,000X. Photo from Haley/CDC. • Severe headache microbiology laboratories • Confusion throughout the world. The organism is a fungus that • Fever is usually found in the soil • Night sweats www.HardyDiagnostics.com and on trees. It is not spread • Unintended weight loss from human to human or animal to human. -
Idiopathic CD4 Lymphocytopenia Presenting As Refractory Cryptococcal Meningitis
Case Report Idiopathic CD4 lymphocytopenia presenting as refractory cryptococcal meningitis A. Sharma, V. Lal, M. Modi, D. Khurana, S. Bal, S. Prabhakar Department of Neurology, Postgraduate Institute of Medical Education and Research, Chandigarh-160 012, India Abstract Idiopathic CD4 T-lymphocytopenia (ICL) is a syndrome characterized by depletion of CD4 T-cells without evidence of human immunodeficiency virus (HIV) infection. There are a few reported cases of ICL associated with different diseases and clinical conditions, most commonly the opportunistic infections like Tuberculosis, fungal and parasitic diseases which are also seen in HIV-positive patients. We report a case without risk factors or laboratory evidence of HIV infection who presented with refractory cryptococcal meningitis and was found to have ICL. Key Words Cryptococcus, CD4, idiopathic For correspondence: Dr. Vivek Lal, Department of Neurology, PGIMER, Sector-12, Chandigarh-160 012, India. E-mail: [email protected] Ann Indian Acad Neurol 2010;13:136-8 [DOI: 10.4103/0972-2327.64646] Introduction and decreased pain and temperature sensation in the right half of the body, with sparing of the face. The neurological Idiopathic CD4 lymphocytopenia (ICL) was defi ned by the examination was otherwise normal. Plain magnetic resonance United States Centers for Disease Control and Prevention imaging (MRI) brain revealed a T2 hyperintensity in the (CDC) as a clinical condition in patients with depressed left thalamus, extending to involve the left corona radiata numbers of circulating CD4 T lymphocytes (<300 cells/µl or [Figure 1]. There was no meningeal enhancement on contrast- <20% of total T cells) at a minimum of two separate time points enhanced MRI. -
Emanuele Giurisato Curriculum Vitae
Emanuele Giurisato Curriculum Vitae Present position: Lecturer at University of Siena. Department of Biotechnology, Chemistry and Pharmacy, University of Siena. Via Aldo Moro, 1 53100, Siena, Italy Phone: +39 0577 232125 (office) e-mail: [email protected] Visiting scientist at University of Manchester Faculty of Biology, Medicine and Health Oxford Road, M13 9PT, Manchester, UK e-mail: [email protected] Education and training: 2014-2016 Marie-Curie Fellowship (I-MOVE 2013-1-OUT-24-EXP) University of Manchester 2009-present Lecturer at University of Siena 2008 Post-doctoral fellowship Department of Physiopathology Molecular Medicine and Public Health, University of Siena, Italy 2003-2007 Post-doctoral fellowship Department of Pathology and Immunology, Washington University School of Medicine, St Louis, MO (USA) 1999-2002 Ph.D student in “Molecular Medicine” Department of Physiopathology Molecular Medicine and Public Health, University of Siena, Italy 1996-1999 Research assistant, Department of Biomedical Experimental Sciences, CRIBI (University of Padua, Italy) 1996 BSc, Biological Sciences (specialization in Molecular Biology), Department of Biomedical Experimental Sciences, (University of Padua, Italy) Research experience: Nov.’96 -Sept. ‘99: Research assistant at the University of Padua, Department of Biomedical Experimental Sciences, CRIBI. Advisor: Dr. M. Cantini Telethon projects A101 “Myoblast-selective mitogens released by macrophage as a tool for muscle regeneration and gene therapy” and A095 “FasL engineered myoblasts can escape from death: requisite for immune protection in gene therapy via myoblast”. Oct.1999-Dec 2002: Ph. D. student in “Molecular Medicine” at the University of Siena. Advisor: Prof. A. Benedetti Research project: (i) role of plasma-membrane microdomains (rafts) in cellular responses to stimulatory molecules in T lymphocytes, (ii) Calcium signalling in T cells and (iii) involvement of lipid rafts during the immunological synapse formation. -
Safety Precautions for Working with Cryptococcus Neoformans
Safety Precautions for Working with Cryptococcus neoformans The basidiomycete fungus Cryptococcus neoformans is an invasive opportunistic pathogen of the central nervous system and the most frequent cause of fungal meningitis worldwide. Although Cryptococcus is a problem in the United States, it is significantly more prevalent and especially devastating in the developing world, such as sub-Saharan Africa, resulting in in more than 625,000 deaths per year worldwide. C. neoformans survives in the environment within soil, trees, and bird guano, where it can interact with wild animals or microbial predators, maintaining its virulence. Human infection is thought to be acquired by inhalation of desiccated yeast cells or spores from an environmental source. C. neoformans can colonize the host respiratory tract without producing any disease. Infection is typically asymptomatic, and it can be either cleared or enter a dormant, latent form. When host immunity is compromised, the dormant form can be reactivated and disseminate hematogenously to cause systemic infection. C. neoformans can infect or spread to any organ to cause localized infections involving the skin, eyes, myocardium, bones, joints, lungs, prostate gland, or urinary tract, in addition to its propensity to infect the central nervous systems. The following diseases and medications are risk factors for C. neoformans infection and are associated with at least some degree of immunosuppression: Ø HIV/AIDs (CD4 < 100cells/mm) Ø Corticosteroids or other immunosuppressive medications for cancer, chemotherapy, or organ transplants Ø Solid organ transplantations Ø Diabetes mellitus Ø Heart, lung, or liver disease Ø Pregnancy Even otherwise healthy, fully immunocompetent individuals can develop cryptococcosis, as may well be the case in a lab accident. -
Cryptococcus Neoformans Thermotolerance to Avian Body Temperature Is Sufficient for Extracellular Growth but Not Intracellular S
www.nature.com/scientificreports OPEN Cryptococcus neoformans Thermotolerance to Avian Body Temperature Is Sufficient Received: 30 October 2015 Accepted: 14 January 2016 For Extracellular Growth But Published: 17 February 2016 Not Intracellular Survival In Macrophages Simon A Johnston1,2, Kerstin Voelz3 & Robin C May3,4 Cryptococcus neoformans is a fatal fungal pathogen of humans that efficiently parasitises macrophages. Birds can be colonised by cryptococci and can transmit cryptococcosis to humans via inhalation of inoculated bird excreta. However, colonisation of birds appears to occur in the absence of symptomatic infection. Here, using a pure population of primary bird macrophages, we demonstrate a mechanism for this relationship. We find that bird macrophages are able to suppress the growth of cryptococci seen in mammalian cells despite C. neoformans being able to grow at bird body temperature, and are able to escape from bird macrophages by vomocytosis. A small subset of cryptococci are able to adapt to the inhibitory intracellular environment of bird macrophages, exhibiting a large cell phenotype that rescues growth suppression. Thus, restriction of intracellular growth combined with survival at bird body temperature explains the ability of birds to efficiently spreadC. neoformans in the environment whilst avoiding systemic disease. Cryptococcus neoformans is an environmental fungus that causes fatal human and animal disease. In humans, cryptococcosis causes hundreds of thousands of deaths each year, the vast majority in immunocompromised patients1. As with many significant pathogens, cryptococci are able to parasitise host cells. This potential for an intracellular lifestyle allows C. neoformans the potential to evade additional host immune responses and thus spread within the body, leading to systemic disease2,3. -
Chronic Mucocutaneous Candidiasis Associated with Paracoccidioidomycosis in a Patient with Mannose Receptor Deficiency: First Case Reported in the Literature
Revista da Sociedade Brasileira de Medicina Tropical Journal of the Brazilian Society of Tropical Medicine Vol.:54:(e0008-2021): 2021 https://doi.org/10.1590/0037-8682-0008-2021 Case Report Chronic mucocutaneous candidiasis associated with paracoccidioidomycosis in a patient with mannose receptor deficiency: First case reported in the literature Dewton de Moraes Vasconcelos[1], Dalton Luís Bertolini[1] and Maurício Domingues Ferreira[1] [1]. Universidade de São Paulo, Faculdade de Medicina, Hospital das Clinicas, Departamento de Dermatologia, Ambulatório das Manifestações Cutâneas das Imunodeficiências Primárias, São Paulo, SP, Brasil. Abstract We describe the first report of a patient with chronic mucocutaneous candidiasis associated with disseminated and recurrent paracoccidioidomycosis. The investigation demonstrated that the patient had a mannose receptor deficiency, which would explain the patient’s susceptibility to chronic infection by Candida spp. and systemic infection by paracoccidioidomycosis. Mannose receptors are responsible for an important link between macrophages and fungal cells during phagocytosis. Deficiency of this receptor could explain the susceptibility to both fungal species, suggesting the impediment of the phagocytosis of these fungi in our patient. Keywords: Chronic mucocutaneous candidiasis. Paracoccidioidomycosis. Mannose receptor deficiency. INTRODUCTION “chronic mucocutaneous candidiasis and mannose receptor deficiency,” “chronic mucocutaneous candidiasis and paracoccidioidomycosis,” Chronic mucocutaneous -
Identification of Culture-Negative Fungi in Blood and Respiratory Samples
IDENTIFICATION OF CULTURE-NEGATIVE FUNGI IN BLOOD AND RESPIRATORY SAMPLES Farida P. Sidiq A Dissertation Submitted to the Graduate College of Bowling Green State University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY May 2014 Committee: Scott O. Rogers, Advisor W. Robert Midden Graduate Faculty Representative George Bullerjahn Raymond Larsen Vipaporn Phuntumart © 2014 Farida P. Sidiq All Rights Reserved iii ABSTRACT Scott O. Rogers, Advisor Fungi were identified as early as the 1800’s as potential human pathogens, and have since been shown as being capable of causing disease in both immunocompetent and immunocompromised people. Clinical diagnosis of fungal infections has largely relied upon traditional microbiological culture techniques and examination of positive cultures and histopathological specimens utilizing microscopy. The first has been shown to be highly insensitive and prone to result in frequent false negatives. This is complicated by atypical phenotypes and organisms that are morphologically indistinguishable in tissues. Delays in diagnosis of fungal infections and inaccurate identification of infectious organisms contribute to increased morbidity and mortality in immunocompromised patients who exhibit increased vulnerability to opportunistic infection by normally nonpathogenic fungi. In this study we have retrospectively examined one-hundred culture negative whole blood samples and one-hundred culture negative respiratory samples obtained from the clinical microbiology lab at the University of Michigan Hospital in Ann Arbor, MI. Samples were obtained from randomized, heterogeneous patient populations collected between 2005 and 2006. Specimens were tested utilizing cetyltrimethylammonium bromide (CTAB) DNA extraction and polymerase chain reaction amplification of internal transcribed spacer (ITS) regions of ribosomal DNA utilizing panfungal ITS primers. -
Pulmonary Cryptococcosis Secondary To
& My gy co lo lo ro g i y V Ramana et al., Virol Mycol 2012, 1:3 Virology & Mycology DOI: 10.4172/2161-0517.1000107 ISSN: 2161-0517 Case Report Open Access Pulmonary Cryptococcosis Secondary to Bronchial Asthma Presenting as Type I Respiratory Failure- A Case Report with Review of Literature KV Ramana*, Moses Vinay Kumar, Sanjeev D Rao, Akhila R, Sandhya, Shruthi P, Pranuthi M, Krishnappa M, Anand K Department of Microbiology, Prathima Inst of Medical Sciences, Nagunur, Karimnagar, Andhrapradesh, India Introduction mellitus, pleuritis, systemic lupus erythematus, cushings syndrome, Continous Ambulatory Peritoneal Dialysis (CAPD), liver cirrhosis, Cryptococcus spp, was first isolated and described in 1894 by cancer, organ transplants, spleenectomy, malnutrition, leprosy, Sanfelice F in Italy from peach juice and named it as Saccharomyces pulmonary tuberculosis and those on cortico steroid therapy [13-20]. neoformans, is an yeast like fungus [1], first isolated from a clinical Pulmonary Cryptococcosis may be presenting as pleural effusions, specimen by Busse in the same year from Germany [2]. Cryptococci solitary or multiple masses, glass-ground interstitial opacities, dense are a saprophytic fungi present in soil contaminated with bird consolidations, patchy, segmented or lobar air space consolidation droppings mainly of pigeons, roosting sites and decaying vegetables (cryptococcal pneumonia) and nodular and reticulonodular cavities. [3]. Previous reports have also showed the presence of Cryptococcus Differential diagnosis of pulmonary cryptococcosis should be done spp colonized in the nasopharynx and on skin of healthy individuals with pneumonia [21,22]. Review of literature showed only two previous [4]. Belonging to Basidiomyctes group of fungi Cryptococcus spp reported cases of pulmonary cryptococcosis presenting as acute primarily infects central nervous system causing meningoencephalitis respiratory failure [7,23,24].