Lichenology in Germany: Past, Present and Future
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Phylogeny of the Cetrarioid Core (Parmeliaceae) Based on Five
The Lichenologist 41(5): 489–511 (2009) © 2009 British Lichen Society doi:10.1017/S0024282909990090 Printed in the United Kingdom Phylogeny of the cetrarioid core (Parmeliaceae) based on five genetic markers Arne THELL, Filip HÖGNABBA, John A. ELIX, Tassilo FEUERER, Ingvar KÄRNEFELT, Leena MYLLYS, Tiina RANDLANE, Andres SAAG, Soili STENROOS, Teuvo AHTI and Mark R. D. SEAWARD Abstract: Fourteen genera belong to a monophyletic core of cetrarioid lichens, Ahtiana, Allocetraria, Arctocetraria, Cetraria, Cetrariella, Cetreliopsis, Flavocetraria, Kaernefeltia, Masonhalea, Nephromopsis, Tuckermanella, Tuckermannopsis, Usnocetraria and Vulpicida. A total of 71 samples representing 65 species (of 90 worldwide) and all type species of the genera are included in phylogentic analyses based on a complete ITS matrix and incomplete sets of group I intron, -tubulin, GAPDH and mtSSU sequences. Eleven of the species included in the study are analysed phylogenetically for the first time, and of the 178 sequences, 67 are newly constructed. Two phylogenetic trees, one based solely on the complete ITS-matrix and a second based on total information, are similar, but not entirely identical. About half of the species are gathered in a strongly supported clade composed of the genera Allocetraria, Cetraria s. str., Cetrariella and Vulpicida. Arctocetraria, Cetreliopsis, Kaernefeltia and Tuckermanella are monophyletic genera, whereas Cetraria, Flavocetraria and Tuckermannopsis are polyphyletic. The taxonomy in current use is compared with the phylogenetic results, and future, probable or potential adjustments to the phylogeny are discussed. The single non-DNA character with a strong correlation to phylogeny based on DNA-sequences is conidial shape. The secondary chemistry of the poorly known species Cetraria annae is analyzed for the first time; the cortex contains usnic acid and atranorin, whereas isonephrosterinic, nephrosterinic, lichesterinic, protolichesterinic and squamatic acids occur in the medulla. -
Garden's Bulletin Part2 13.Indd
Gardens’A Conspectus Bulletin of the Lichens Singapore (Lichenized 61 (2):Fungi) 437-481. of Singapore 2010 437 A Conspectus of the Lichens (Lichenized Fungi) of Singapore H.J.M. SIPMAN Free University of Berlin Botanical Garden and Museum Königin-Luise-Str. 6-8 D-14195 Berlin, Germany Abstract A total of 296 species of lichenized fungi are reported from Singapore and presented in an annotated list with local distributional information. It is based on herbarium and literature study and the fieldwork done in the year 2000. Unidentified samples suggest the figure to be an underestimation, while some of the listed species may have become extinct. Lists of synonyms and collectors are added. Introduction Tropical conurbations, the world’s most fast-growing habitat, have turned out to harbour significant numbers of lichenized fungi.A ptroot and Seaward (1999) and Aptroot and Sipman (2001) report no less than 308 species for the city of Hongkong. Singapore seems particularly suitable for a study of lichens in an urbanized tropical area because it has received regular attention from botanists during its development from primary lowland forest with small settlements ca 1800 to extensive plantations a century later and to the present urbanized area with large built-up high rise areas interspersed by parks and secondary forest. During 1800-1964 scattered lichen collections were made by visiting and resident general botanists, e.g., E. Almquist, O. Beccari, T.R. Chipp, Kiah, A.M. Lemaitre, A.C. Maingay, H. Möller. Their collections have been investigated and published by, e.g., Krempelhuber (1875, 1877), Nylander and Crombie (1884) and Müller Argoviensis (1893). -
Revisiting Zero Hour 1945
REVISITING ZERO-HOUR 1945 THE EMERGENCE OF POSTWAR GERMAN CULTURE edited by STEPHEN BROCKMANN FRANK TROMMLER VOLUME 1 American Institute for Contemporary German Studies The Johns Hopkins University REVISITING ZERO-HOUR 1945 THE EMERGENCE OF POSTWAR GERMAN CULTURE edited by STEPHEN BROCKMANN FRANK TROMMLER HUMANITIES PROGRAM REPORT VOLUME 1 The views expressed in this publication are those of the author(s) alone. They do not necessarily reflect the views of the American Institute for Contemporary German Studies. ©1996 by the American Institute for Contemporary German Studies ISBN 0-941441-15-1 This Humanities Program Volume is made possible by the Harry & Helen Gray Humanities Program. Additional copies are available for $5.00 to cover postage and handling from the American Institute for Contemporary German Studies, Suite 420, 1400 16th Street, N.W., Washington, D.C. 20036-2217. Telephone 202/332-9312, Fax 202/265- 9531, E-mail: [email protected] Web: http://www.aicgs.org ii F O R E W O R D Since its inception, AICGS has incorporated the study of German literature and culture as a part of its mandate to help provide a comprehensive understanding of contemporary Germany. The nature of Germany’s past and present requires nothing less than an interdisciplinary approach to the analysis of German society and culture. Within its research and public affairs programs, the analysis of Germany’s intellectual and cultural traditions and debates has always been central to the Institute’s work. At the time the Berlin Wall was about to fall, the Institute was awarded a major grant from the National Endowment for the Humanities to help create an endowment for its humanities programs. -
Australasian Lichenology Number 56, January 2005
Australasian Lichenology Number 56, January 2005 Australasian Lichenology Number 56, January 2005 ISSN 1328-4401 The Austral Pannaria immixta c.olonizes rock, bark, and occasionally bryophytes in both shaded and well-lit humid lowlands. Its two most distinctive traits are its squamulose thallus and its gyrose apothecial discs. 1 mm c:::::===- CONTENTS NEWS Kantvilas, ~ack Elix awarded the Acharius medal at IAL5 2 BOOK REVIEW Galloway, DJ-The Lichen Hunters, by Oliver Gilbert (2004) 4 RECENT LITERATURE ON AUSTRALASIAN LICHENS 7 ADDITIONAL LICHEN RECORDS FROM AUSTRALIA Elix, JA; Lumbsch, HT (55)-Diploschistes conception is 8 ARTICLES Archer, AW-Australian species in the genus Diorygma (Graphidaceae) ....... 10 Elix, JA; Blanco, 0; Crespo, A-A new species of Flauoparmelia (Parmeliaceae, lichenized Ascomycota) from Western Australia ...... .... ............................ ...... 12 Galloway, DJ; Sancho, LG-Umbilicaria murihikuana and U. robusta (Umbili cariaceae: Ascomycota), two new taxa from Aotearoa New Zealand .. ... .. ..... 16 Elix, JA; Bawingan, PA; Lardizaval, M; Schumm, F-Anew species ofMenegazzia (Parmeliaceae, lichenized Ascomycota) and new records of Parmeliaceae from Papua New Guinea and the Philippines .................................. .. .................... 20 Malcolm, WM-'ITansfer ofDimerella rubrifusca to Coenogonium ........ ......... 25 Johnson, PN- Lichen succession near Arthur's Pass, New Zealand ............... 26 NEWS JACK ELIXAWARDED THE ACHARIUS MEDALAT IAL5 The recent Fifth Conference of the International Association for Lichenology (1AL5) in Tartu, Estonia, was a highly successful event, and most Australasian lichenologists will have the opportunity to read of its various academic achieve ments in other media*. The social programme included the traditionallAL Din ner, where, after many days of symposia, poster sessions, excursions, meetings and other lichenological events, conference delegates mingle informally and dust away their weariness over food and drink. -
Gyalideopsis Floridae, Sp. Nov. a New Lichenicolous Lichen from Florida
The Bryologist 104(1), pp. 130 133 Copyright q 2001 by the American Bryological and Lichenological Society, Inc. Gyalideopsis ¯oridae, sp. nov. a New Lichenicolous Lichen from Florida (Gomphillaceae, Ascomycetes) JAVIER ETAYO Navarro Villoslada 16, 38 dcha, E-31003 Pamplona, Spain; e-mail: [email protected] PAUL DIEDERICH MuseÂe national d'histoire naturelle, 25 rue Munster, L-2160 Luxembourg, Luxembourg; e-mail: paul.diederich @ci.educ.lu Abstract. Gyalideopsis ¯oridae, a lichenicolous lichen growing on Parmotrema in Florida (U.S.A.) is described as new. It is distinguished from all hitherto known species of the genus by multispored asci and simple ascospores. During our studies on lichenicolous species of GYALIDEOPSIS FLORIDAE Etayo & Diederich, sp. Leotiales with dark apothecia; hyaline, aseptate as- nov. FIGS. 1±2 cospores; non-amyloid asci; and linear, sparsely Gyalideopsis lichenisata in Parmotrematis thallis licheni- branched paraphyses (Diederich & Etayo 2000; cola, ascomatibus atris, ascis multisporis et ascosporis Etayo & Diederich 2000), we examined several aseptatis insignis. specimens of a lichenicolous lichen growing on TYPE: U.S.A. FLORIDA. Duval County, Big Talbot Island species of Parmotrema in Florida (U.S.A.); they are State Park, along trail to `Scrubby Bluff', 1.1 mi. (1.76 distinguished by aseptate ascospores, multispored km) from N end of park, 2.2 mi. (3.5 km) from S end of park, on Parmotrema rigidum, 17.XII.1988, R. C. Harris asci, and anastomosing paraphyses. A comparison 23890 (NY, holotype; hb. Diederich, hb. Etayo, isotypes). with other lichenicolous fungi and lichens revealed Thallus very thin, continuous, forming dispersed strong resemblances to the predominantly tropical greenish gray patches on surface of host thallus, genus Gyalideopsis VeÏzda (Gomphillaceae), the when well-developed slightly raised over surface of members of which are mainly corticolous or foli- host thallus, 100±250(±1,000) mm diam. -
An Evolving Phylogenetically Based Taxonomy of Lichens and Allied Fungi
Opuscula Philolichenum, 11: 4-10. 2012. *pdf available online 3January2012 via (http://sweetgum.nybg.org/philolichenum/) An evolving phylogenetically based taxonomy of lichens and allied fungi 1 BRENDAN P. HODKINSON ABSTRACT. – A taxonomic scheme for lichens and allied fungi that synthesizes scientific knowledge from a variety of sources is presented. The system put forth here is intended both (1) to provide a skeletal outline of the lichens and allied fungi that can be used as a provisional filing and databasing scheme by lichen herbarium/data managers and (2) to announce the online presence of an official taxonomy that will define the scope of the newly formed International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). The online version of the taxonomy presented here will continue to evolve along with our understanding of the organisms. Additionally, the subfamily Fissurinoideae Rivas Plata, Lücking and Lumbsch is elevated to the rank of family as Fissurinaceae. KEYWORDS. – higher-level taxonomy, lichen-forming fungi, lichenized fungi, phylogeny INTRODUCTION Traditionally, lichen herbaria have been arranged alphabetically, a scheme that stands in stark contrast to the phylogenetic scheme used by nearly all vascular plant herbaria. The justification typically given for this practice is that lichen taxonomy is too unstable to establish a reasonable system of classification. However, recent leaps forward in our understanding of the higher-level classification of fungi, driven primarily by the NSF-funded Assembling the Fungal Tree of Life (AFToL) project (Lutzoni et al. 2004), have caused the taxonomy of lichen-forming and allied fungi to increase significantly in stability. This is especially true within the class Lecanoromycetes, the main group of lichen-forming fungi (Miadlikowska et al. -
H. Thorsten Lumbsch VP, Science & Education the Field Museum 1400
H. Thorsten Lumbsch VP, Science & Education The Field Museum 1400 S. Lake Shore Drive Chicago, Illinois 60605 USA Tel: 1-312-665-7881 E-mail: [email protected] Research interests Evolution and Systematics of Fungi Biogeography and Diversification Rates of Fungi Species delimitation Diversity of lichen-forming fungi Professional Experience Since 2017 Vice President, Science & Education, The Field Museum, Chicago. USA 2014-2017 Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. Since 2014 Curator, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2013-2014 Associate Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2009-2013 Chair, Dept. of Botany, The Field Museum, Chicago, USA. Since 2011 MacArthur Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2006-2014 Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2005-2009 Head of Cryptogams, Dept. of Botany, The Field Museum, Chicago, USA. Since 2004 Member, Committee on Evolutionary Biology, University of Chicago. Courses: BIOS 430 Evolution (UIC), BIOS 23410 Complex Interactions: Coevolution, Parasites, Mutualists, and Cheaters (U of C) Reading group: Phylogenetic methods. 2003-2006 Assistant Curator, Dept. of Botany, The Field Museum, Chicago, USA. 1998-2003 Privatdozent (Assistant Professor), Botanical Institute, University – GHS - Essen. Lectures: General Botany, Evolution of lower plants, Photosynthesis, Courses: Cryptogams, Biology -
One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
Phytotaxa 18: 1–127 (2011) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Monograph PHYTOTAXA Copyright © 2011 Magnolia Press ISSN 1179-3163 (online edition) PHYTOTAXA 18 One hundred new species of lichenized fungi: a signature of undiscovered global diversity H. THORSTEN LUMBSCH1*, TEUVO AHTI2, SUSANNE ALTERMANN3, GUILLERMO AMO DE PAZ4, ANDRÉ APTROOT5, ULF ARUP6, ALEJANDRINA BÁRCENAS PEÑA7, PAULINA A. BAWINGAN8, MICHEL N. BENATTI9, LUISA BETANCOURT10, CURTIS R. BJÖRK11, KANSRI BOONPRAGOB12, MAARTEN BRAND13, FRANK BUNGARTZ14, MARCELA E. S. CÁCERES15, MEHTMET CANDAN16, JOSÉ LUIS CHAVES17, PHILIPPE CLERC18, RALPH COMMON19, BRIAN J. COPPINS20, ANA CRESPO4, MANUELA DAL-FORNO21, PRADEEP K. DIVAKAR4, MELIZAR V. DUYA22, JOHN A. ELIX23, ARVE ELVEBAKK24, JOHNATHON D. FANKHAUSER25, EDIT FARKAS26, LIDIA ITATÍ FERRARO27, EBERHARD FISCHER28, DAVID J. GALLOWAY29, ESTER GAYA30, MIREIA GIRALT31, TREVOR GOWARD32, MARTIN GRUBE33, JOSEF HAFELLNER33, JESÚS E. HERNÁNDEZ M.34, MARÍA DE LOS ANGELES HERRERA CAMPOS7, KLAUS KALB35, INGVAR KÄRNEFELT6, GINTARAS KANTVILAS36, DOROTHEE KILLMANN28, PAUL KIRIKA37, KERRY KNUDSEN38, HARALD KOMPOSCH39, SERGEY KONDRATYUK40, JAMES D. LAWREY21, ARMIN MANGOLD41, MARCELO P. MARCELLI9, BRUCE MCCUNE42, MARIA INES MESSUTI43, ANDREA MICHLIG27, RICARDO MIRANDA GONZÁLEZ7, BIBIANA MONCADA10, ALIFERETI NAIKATINI44, MATTHEW P. NELSEN1, 45, DAG O. ØVSTEDAL46, ZDENEK PALICE47, KHWANRUAN PAPONG48, SITTIPORN PARNMEN12, SERGIO PÉREZ-ORTEGA4, CHRISTIAN PRINTZEN49, VÍCTOR J. RICO4, EIMY RIVAS PLATA1, 50, JAVIER ROBAYO51, DANIA ROSABAL52, ULRIKE RUPRECHT53, NORIS SALAZAR ALLEN54, LEOPOLDO SANCHO4, LUCIANA SANTOS DE JESUS15, TAMIRES SANTOS VIEIRA15, MATTHIAS SCHULTZ55, MARK R. D. SEAWARD56, EMMANUËL SÉRUSIAUX57, IMKE SCHMITT58, HARRIE J. M. SIPMAN59, MOHAMMAD SOHRABI 2, 60, ULRIK SØCHTING61, MAJBRIT ZEUTHEN SØGAARD61, LAURENS B. SPARRIUS62, ADRIANO SPIELMANN63, TOBY SPRIBILLE33, JUTARAT SUTJARITTURAKAN64, ACHRA THAMMATHAWORN65, ARNE THELL6, GÖRAN THOR66, HOLGER THÜS67, EINAR TIMDAL68, CAMILLE TRUONG18, ROMAN TÜRK69, LOENGRIN UMAÑA TENORIO17, DALIP K. -
Newsletter No
Newsletter No. 165 December 2015 Price: $5.00 AUSTRALASIAN SYSTEMATIC BOTANY SOCIETY INCORPORATED Council President Vice President Darren Crayn Daniel Murphy Australian Tropical Herbarium (ATH) Royal Botanic Gardens Victoria James Cook University, Cairns Campus Birdwood Avenue PO Box 6811, Cairns Qld 4870 Melbourne, Vic. 3004 Australia Australia Tel: (+61)/(0)7 4232 1859 Tel: (+61)/(0) 3 9252 2377 Email: [email protected] Email: [email protected] Secretary Treasurer Leon Perrie John Clarkson Museum of New Zealand Te Papa Tongarewa Queensland Parks and Wildlife Service PO Box 467, Wellington 6011 PO Box 975, Atherton Qld 4883 New Zealand Australia Tel: (+64)/(0) 4 381 7261 Tel: (+61)/(0) 7 4091 8170 Email: [email protected] Mobile: (+61)/(0) 437 732 487 Councillor Email: [email protected] Jennifer Tate Councillor Institute of Fundamental Sciences Mike Bayly Massey University School of Botany Private Bag 11222, Palmerston North 4442 University of Melbourne, Vic. 3010 New Zealand Australia Tel: (+64)/(0) 6 356 9099 ext. 84718 Tel: (+61)/(0) 3 8344 5055 Email: [email protected] Email: [email protected] Other constitutional bodies Hansjörg Eichler Research Committee Affiliate Society David Glenny Papua New Guinea Botanical Society Greg Leach Sarah Matthews Advisory Standing Committees [Vacancies to be filled by Council shortly] Financial Chair: Dan Murphy, Vice President Patrick Brownsey Grant application closing dates David Cantrill Hansjörg Eichler Research Fund: Bob Hill on March 14th and September 14th -
<I> Lecanoromycetes</I> of Lichenicolous Fungi Associated With
Persoonia 39, 2017: 91–117 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.05 Phylogenetic placement within Lecanoromycetes of lichenicolous fungi associated with Cladonia and some other genera R. Pino-Bodas1,2, M.P. Zhurbenko3, S. Stenroos1 Key words Abstract Though most of the lichenicolous fungi belong to the Ascomycetes, their phylogenetic placement based on molecular data is lacking for numerous species. In this study the phylogenetic placement of 19 species of cladoniicolous species lichenicolous fungi was determined using four loci (LSU rDNA, SSU rDNA, ITS rDNA and mtSSU). The phylogenetic Pilocarpaceae analyses revealed that the studied lichenicolous fungi are widespread across the phylogeny of Lecanoromycetes. Protothelenellaceae One species is placed in Acarosporales, Sarcogyne sphaerospora; five species in Dactylosporaceae, Dactylo Scutula cladoniicola spora ahtii, D. deminuta, D. glaucoides, D. parasitica and Dactylospora sp.; four species belong to Lecanorales, Stictidaceae Lichenosticta alcicorniaria, Epicladonia simplex, E. stenospora and Scutula epiblastematica. The genus Epicladonia Stictis cladoniae is polyphyletic and the type E. sandstedei belongs to Leotiomycetes. Phaeopyxis punctum and Bachmanniomyces uncialicola form a well supported clade in the Ostropomycetidae. Epigloea soleiformis is related to Arthrorhaphis and Anzina. Four species are placed in Ostropales, Corticifraga peltigerae, Cryptodiscus epicladonia, C. galaninae and C. cladoniicola -
Courses of Instruction First-Year Seminars
V COURSES OF INSTRUCTION FIRST-YEAR SEMINARS Courses of Instruction OURSES are open to all students, subject only to the restrictions specified in Cthe individual descriptions. Senior Honors courses, usually open only to candidates for the degree with Honors, are numbered 77 and 78, and Special Topics courses are numbered 97 and 98. All courses, unless otherwise marked, are full courses. The course numbers of double courses and half courses are followed by D or H. SPECIAL TOPICS COURSES Departments may offer a semester course known as Special Topics in which a student or a group of students study or read widely in a field of special inter- est. It is understood that this course will not duplicate any other course regularly offered in the curriculum and that the student will work in this course as inde- pendently as the director thinks possible. Before the time of registration, the student who arranges to take a Special Top- ics course should consult the instructor in that particular field, who will direct the student’s work; they will decide the title to be reported, the nature of the examination or term paper, and will discuss the preparation of a bibliography and a plan of coherent study. All students must obtain final approval of the Department before registration. Two Special Topics courses may not be taken concurrently except with the prior approval of the Student’s Class Dean. FIRST-YEAR SEMINARS: THE LIBERAL STUDIES CURRICULUM During 2008-09, Faculty members in groups of one or more will teach 24 First- Year Seminars. Every first-year students must take one of these courses during the first semester. -
A Field Guide to Biological Soil Crusts of Western U.S. Drylands Common Lichens and Bryophytes
A Field Guide to Biological Soil Crusts of Western U.S. Drylands Common Lichens and Bryophytes Roger Rosentreter Matthew Bowker Jayne Belnap Photographs by Stephen Sharnoff Roger Rosentreter, Ph.D. Bureau of Land Management Idaho State Office 1387 S. Vinnell Way Boise, ID 83709 Matthew Bowker, Ph.D. Center for Environmental Science and Education Northern Arizona University Box 5694 Flagstaff, AZ 86011 Jayne Belnap, Ph.D. U.S. Geological Survey Southwest Biological Science Center Canyonlands Research Station 2290 S. West Resource Blvd. Moab, UT 84532 Design and layout by Tina M. Kister, U.S. Geological Survey, Canyonlands Research Station, 2290 S. West Resource Blvd., Moab, UT 84532 All photos, unless otherwise indicated, copyright © 2007 Stephen Sharnoff, Ste- phen Sharnoff Photography, 2709 10th St., Unit E, Berkeley, CA 94710-2608, www.sharnoffphotos.com/. Rosentreter, R., M. Bowker, and J. Belnap. 2007. A Field Guide to Biological Soil Crusts of Western U.S. Drylands. U.S. Government Printing Office, Denver, Colorado. Cover photos: Biological soil crust in Canyonlands National Park, Utah, cour- tesy of the U.S. Geological Survey. 2 Table of Contents Acknowledgements ....................................................................................... 4 How to use this guide .................................................................................... 4 Introduction ................................................................................................... 4 Crust composition ..................................................................................