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Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
Biotype Differentiation in the Typhula Ishikariensis Complex and Their Allopatry in Hokkaido
日 植 病 報 48: 275-280 (1982) Ann. Phytopath. Soc. Japan 48: 275-280 (1982) Biotype Differentiation in the Typhula ishikariensis Complex and Their Allopatry in Hokkaido Naoyuki MATSUMOTO*, Toru SATO** and Takao ARAKI*** 松 本 直 幸 *・佐藤 徹 **・荒木 隆 男***:雪腐 黒 色 小 粒 菌 核 病 菌 の生 物 型 と そ れ らの 北 海 道 内 に お け る異 所 性 Abstract Typhula ishikariensis isolates were collected from various parts of Hokkaido. There were two genetically different groups which did not mate with each other; one was termed biotype A, and the other was further divided into two by cultural characteristics, i.e., biotypes B and C. Biotype A was identical to T. ishikariensis and T. ishikariensis var. ishikariensis. Biotype B was not identical to T. idahoensis or T. ishikariensis var. idahoensis. Biotype C was similar to T. ishikariensis var. canadensis. Biotype A tended to occur inland where deep snow cover lasts for a long time. Biotype B was obtained mainly from the coastal regions where snow cover is thin and short in time. The distribution of biotype C was irregular. Taxonomic significance of the genetics and allopatry in the T. ishikari- ensis complex is discussed. (Received August 31, 1981) Key Words: snow mold fungi, taxonomy, distribution. Introduction Pathogenic species of Typhula had been confused in taxonomy until McDonald14) reviewed the literature on these fungi in 1961. Although he suggested the need for the comparison of many specimens from different sources by one investigator, he placed T. ishikariensis S. Imai and T. -
How Many Fungi Make Sclerotia?
fungal ecology xxx (2014) 1e10 available at www.sciencedirect.com ScienceDirect journal homepage: www.elsevier.com/locate/funeco Short Communication How many fungi make sclerotia? Matthew E. SMITHa,*, Terry W. HENKELb, Jeffrey A. ROLLINSa aUniversity of Florida, Department of Plant Pathology, Gainesville, FL 32611-0680, USA bHumboldt State University of Florida, Department of Biological Sciences, Arcata, CA 95521, USA article info abstract Article history: Most fungi produce some type of durable microscopic structure such as a spore that is Received 25 April 2014 important for dispersal and/or survival under adverse conditions, but many species also Revision received 23 July 2014 produce dense aggregations of tissue called sclerotia. These structures help fungi to survive Accepted 28 July 2014 challenging conditions such as freezing, desiccation, microbial attack, or the absence of a Available online - host. During studies of hypogeous fungi we encountered morphologically distinct sclerotia Corresponding editor: in nature that were not linked with a known fungus. These observations suggested that Dr. Jean Lodge many unrelated fungi with diverse trophic modes may form sclerotia, but that these structures have been overlooked. To identify the phylogenetic affiliations and trophic Keywords: modes of sclerotium-forming fungi, we conducted a literature review and sequenced DNA Chemical defense from fresh sclerotium collections. We found that sclerotium-forming fungi are ecologically Ectomycorrhizal diverse and phylogenetically dispersed among 85 genera in 20 orders of Dikarya, suggesting Plant pathogens that the ability to form sclerotia probably evolved 14 different times in fungi. Saprotrophic ª 2014 Elsevier Ltd and The British Mycological Society. All rights reserved. Sclerotium Fungi are among the most diverse lineages of eukaryotes with features such as a hyphal thallus, non-flagellated cells, and an estimated 5.1 million species (Blackwell, 2011). -
Basidiomycota: Agaricales) Introducing the Ant-Associated Genus Myrmecopterula Gen
Leal-Dutra et al. IMA Fungus (2020) 11:2 https://doi.org/10.1186/s43008-019-0022-6 IMA Fungus RESEARCH Open Access Reclassification of Pterulaceae Corner (Basidiomycota: Agaricales) introducing the ant-associated genus Myrmecopterula gen. nov., Phaeopterula Henn. and the corticioid Radulomycetaceae fam. nov. Caio A. Leal-Dutra1,5, Gareth W. Griffith1* , Maria Alice Neves2, David J. McLaughlin3, Esther G. McLaughlin3, Lina A. Clasen1 and Bryn T. M. Dentinger4 Abstract Pterulaceae was formally proposed to group six coralloid and dimitic genera: Actiniceps (=Dimorphocystis), Allantula, Deflexula, Parapterulicium, Pterula, and Pterulicium. Recent molecular studies have shown that some of the characters currently used in Pterulaceae do not distinguish the genera. Actiniceps and Parapterulicium have been removed, and a few other resupinate genera were added to the family. However, none of these studies intended to investigate the relationship between Pterulaceae genera. In this study, we generated 278 sequences from both newly collected and fungarium samples. Phylogenetic analyses supported with morphological data allowed a reclassification of Pterulaceae where we propose the introduction of Myrmecopterula gen. nov. and Radulomycetaceae fam. nov., the reintroduction of Phaeopterula, the synonymisation of Deflexula in Pterulicium, and 53 new combinations. Pterula is rendered polyphyletic requiring a reclassification; thus, it is split into Pterula, Myrmecopterula gen. nov., Pterulicium and Phaeopterula. Deflexula is recovered as paraphyletic alongside several Pterula species and Pterulicium, and is sunk into the latter genus. Phaeopterula is reintroduced to accommodate species with darker basidiomes. The neotropical Myrmecopterula gen. nov. forms a distinct clade adjacent to Pterula, and most members of this clade are associated with active or inactive attine ant nests. -
Minireview Snow Molds: a Group of Fungi That Prevail Under Snow
Microbes Environ. Vol. 24, No. 1, 14–20, 2009 http://wwwsoc.nii.ac.jp/jsme2/ doi:10.1264/jsme2.ME09101 Minireview Snow Molds: A Group of Fungi that Prevail under Snow NAOYUKI MATSUMOTO1* 1Department of Planning and Administration, National Agricultural Research Center for Hokkaido Region, 1 Hitsujigaoka, Toyohira-ku, Sapporo 062–8555, Japan (Received January 5, 2009—Accepted January 30, 2009—Published online February 17, 2009) Snow molds are a group of fungi that attack dormant plants under snow. In this paper, their survival strategies are illustrated with regard to adaptation to the unique environment under snow. Snow molds consist of diverse taxonomic groups and are divided into obligate and facultative fungi. Obligate snow molds exclusively prevail during winter with or without snow, whereas facultative snow molds can thrive even in the growing season of plants. Snow molds grow at low temperatures in habitats where antagonists are practically absent, and host plants deteriorate due to inhibited photosynthesis under snow. These features characterize snow molds as opportunistic parasites. The environment under snow represents a habitat where resources available are limited. There are two contrasting strategies for resource utilization, i.e., individualisms and collectivism. Freeze tolerance is also critical for them to survive freezing temper- atures, and several mechanisms are illustrated. Finally, strategies to cope with annual fluctuations in snow cover are discussed in terms of predictability of the habitat. Key words: snow mold, snow cover, low temperature, Typhula spp., Sclerotinia borealis Introduction Typical snow molds have a distinct life cycle, i.e., an active phase under snow and a dormant phase from spring to In northern regions with prolonged snow cover, plants fall. -
Bibliografía Botánica Ibérica, 2010 Fungi
Botanica Complutensis 35: 177-182. 2011 ISSN: 0214-4565 Bibliografía Botánica Ibérica, 2010 Fungi Ana Rosa Burgaz1 2044. ALVARADO, P.; MANJÓN, J. L.; MATHENY, P. B. & ESTEVE- en la depresión del Guadalquivir (Granada). Lactarius RAVENTÓS, F. 2010. Tubariomyces, a new genus of Inocy- 18: 19-27. (Tax, Montagnea, Gr). baceae from the Mediterranean region. Mycologia 2054. BOTELLA, L.; SANTAMARÍA, O. & DÍEZ, J. J. 2010. Fun- 102(69): 1389-1397. (SisM, Tubariomyces, Bu, To, Vi). gi associated with the decline of Pinus halepensis in 2045. ARRILLAGA ANABITARTE, P. & MAYO Z ECHANIZ, M. I. Spain. Fungal Diversity 40: 1-11. (Fitopat, Ascomyce- 2006. Los hongos alucinógenos en la cultura de los pue- tes, A, B, Cu, Ge, Gr, L, M, Ma, Mu, T, Te, V, Z). blos. Aranzadiana 127: 232-243. (Etnobot, Ascomyce- 2055, BURGAZ, A. R. 2010. Bibliografía Botánica Ibérica, tes, Basidiomycetes). 2009. Bot. Complut. 34: 101-111. (Bibl). 2046. AZCÓN-AGUILAR, C.; PALENZUELA JIMÉNEZ, J.; RUIZ GI- 2056. CADIÑANOS-AGUIRRE, J. A. & MATEOS-IZQUIERDO, A. RELA, M.; FERROL, N.; AZCÓN, R.; IRURITA, J. M. & BA- 2010. El complejo Cortinarius cedretorum-C. elegan- REA NAVARRO, J. M. 2010. Análisis de la diversidad de tissimus en España. Bol. Soc. Micol. Madrid 34: 73- micorrizas y hongos micorrícicos asociados a especies 85. (Tax, Ecol, Cortinarius, B, Ba, Bi, Bu, Cc, Cs, Hu, de flora amenazada del Parque Nacional de Sierra Ne- S, Vi). vada: 173-190. En: L. Ramírez & B. Asensio (Eds.), Pro- 2057. CALONGE, F. D. 2010. Lepiota brunneoincarnata: se- yectos de Investigación en Parques Nacionales: 2006- gundo caso de envenenamiento familiar grave en Ma- 2009. -
Typhula Blight Paul Koch, UW-Plant Pathology and PJ Liesch, UW Insect Diagnostic Lab
XHT1270 Provided to you by: Typhula Blight Paul Koch, UW-Plant Pathology and PJ Liesch, UW Insect Diagnostic Lab What is Typhula blight? Typhula blight, also known as gray or speckled snow mold, is a fungal disease affecting all cool season turf grasses (e.g., Kentucky bluegrass, creeping bentgrass, tall fescue, fine fescue, perennial ryegrass) grown in areas with prolonged snow cover. These grasses are widely used in residential lawns and golf courses in Wisconsin and elsewhere in the Midwest. What does Typhula blight look like? Typhula blight initially appears as roughly circular patches of bleached or straw-colored turf that can be up to two to three feet in diameter. When the disease is severe, patches can merge to form larger, irregularly-shaped bleached areas. Affected turf is often matted and can have a water-soaked appearance. At the edges of patches, masses of grayish-white fungal threads (called a mycelium) may form. In 1 3 addition, tiny ( /64 to /16 inch diameter) reddish-brown or black fungal survival Typhula blight causes circular patches of structures (called sclerotia) may be bleached turf that often merge to form larger, irregularly-shaped bleached areas. present. Typhula blight looks very similar to Microdochium patch/pink snow mold (see University of Wisconsin Garden Facts XHT1145, Microdochium Patch), but the Microdochium patch fungus does not produce sclerotia. Where does Typhula blight come from? Typhula blight is caused by two closely related fungi Typhula incarnata and Typhula ishikariensis. In general, T. incarnata is more common in the southern half of Wisconsin while T. ishikariensis is more common in the northern half of the state. -
Basidiomycetous Yeast, Glaciozyma Antarctica, Forming Frost-Columnar Colonies on Frozen Medium
microorganisms Article Basidiomycetous Yeast, Glaciozyma antarctica, Forming Frost-Columnar Colonies on Frozen Medium Seiichi Fujiu 1,2,3, Masanobu Ito 1,3, Eriko Kobayashi 1,3, Yuichi Hanada 1,2, Midori Yoshida 4, Sakae Kudoh 5,* and Tamotsu Hoshino 1,6,* 1 Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), 2-17-2-1, Tsukisamu-higashi, Toyohira-ku, Sapporo 062-8517, Hokkaido, Japan; [email protected] (S.F.); [email protected] (M.I.); [email protected] (E.K.); [email protected] (Y.H.) 2 Graduate School of Science, Hokkaido University, N10 W8, Kita-ku, Sapporo 060-0810, Hokkaido, Japan 3 School of Biological Sciences, Tokai University, 1-1-1, Minaminosawa 5, Minami-ku, Sapporo 005-0825, Hokkaido, Japan 4 Hokkaido Agricultural Research Center, NARO, Hitsujigaoka 1, Toyohira-ku, Sapporo 062-8555, Hokkaido, Japan; [email protected] 5 Biology Group, National Institute of Polar Research, 10-3, Midori-cho, Tachikawa, Tokyo 190-8518, Japan 6 Department of Life and Environmental Science, Faculty of Engineering, Hachinohe Institute of Technology, Obiraki 88-1, Myo, Hachinohe 031-8501, Aomori, Japan * Correspondence: [email protected] (S.K.); [email protected] (T.H.); Tel.: +81-42-512-0739 (S.K.); +81-178-25-8174 (T.H.); Fax: +81-42-528-3492 (S.K.); +81-178-25-6825 (T.H.) Abstract: The basidiomycetous yeast, Glaciozyma antarctica, was isolated from various terrestrial materials collected from the Sôya coast, East Antarctica, and formed frost-columnar colonies on agar plates frozen at −1 ◦C. -
Reclassification of Pterulaceae Corner (Basidiomycota: Agaricales) Introducing the Ant-Associated Genus Myrmecopterula Gen
bioRxiv preprint doi: https://doi.org/10.1101/718809; this version posted September 27, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Reclassification of Pterulaceae Corner (Basidiomycota: Agaricales) introducing the ant-associated genus Myrmecopterula gen. nov., Phaeopterula Henn. and the corticioid Radulomycetaceae fam. nov. Caio A. Leal-Dutra1,5, Gareth W. Griffith1, Maria Alice Neves2, David J. McLaughlin3, Esther G. McLaughlin3, Lina A. Clasen1 & Bryn T. M. Dentinger4 1 Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, Aberystwyth, Ceredigion SY23 3DD WALES 2 Micolab, Departamento de Botânica, Centro de Ciências Biológicas, Universidade Federal de Santa Catarina, Florianópolis, Santa Catarina, Brazil 3 Department of Plant and Microbial Biology, University of Minnesota, 1445 Gortner Avenue, St. Paul, Minnesota 55108, USA 4 Natural History Museum of Utah & Biology Department, University of Utah, 301 Wakara Way, Salt Lake City, Utah 84108, USA 5 CAPES Foundation, Ministry of Education of Brazil, P.O. Box 250, Brasília – DF 70040-020, Brazil ABSTRACT Pterulaceae was formally proposed to group six coralloid and dimitic genera [Actiniceps (=Dimorphocystis), Allantula, Deflexula, Parapterulicium, Pterula and Pterulicium]. Recent molecular studies have shown that some of the characters currently used in Pterulaceae Corner do not distin- guish the genera. Actiniceps and Parapterulicium have been removed and a few other resupinate genera were added to the family. However, none of these studies intended to investigate the relation- ship between Pterulaceae genera. -
Wheat Diseases Ii
WHEAT DISEASES II 1. Foot rot or eyespot. L, lodging in a field; C, and R, lesions 2. Rhizoctonia bare patch, L; sharp on culms eyespot lesions on clums, R 3. Take-all. L, in the field; C, darkened clum bases; R, white 4. Helminthosporium root and crown (foot) heads rot. L, field; R, decayed crowns 5. Frost injury 6. VVinter injury 7. Fusarium root and 8. Typhula blight or speckled snow mold. crown (foot) rot L, infected plants; R, sclerotia 9. Soil-borne mosaic. L, in a low-lying 10. Barley yellow 11. VVheat streak 12. Herbicide (Trifluralin) field; R, leaf symptoms dwarf mosaic injury UNIVERSITY OF ILLINOIS COLLEGE OF AGRICULTURE PLANT DISEASE NO. 6 COOPERATIVE EXTENSION SERVICE and VOCATIONAL AGRICULTURE SERVICE URBANA, ILLINOIS WHEAT DISEASES II 1. Foot Rot or Eyespot, also known as strawbreaker, is caused by the F. culmorum . Seedlings may wither and die while older plants mature soil-borne fungus Pseudocercosporella (Cercosporella) herpotrichoides. early producing fewer tillers and white heads with mostly shriveled Maturing plants lean or break over (lodge) in all d irections from a basal seed. Dry, light-brown to reddish-brown lesions develop in invaded stem or foot rot that develops during wet weather in autumn, winter coleoptile, crown (foot) and root tissue. The greatest yield loss occurs and early spring. Lens-shaped, white-to-light tan lesions with dark when infection of the crown or foot reduces the stand in random or brown margins and up to 4 cm long, form vertically on the stems and irregular patches. Surviving diseased plants are brittle, stunted, and a lower leaf sheaths near the soil line. -
Snow Molds of Turfgrasses, RPD No
report on RPD No. 404 PLANT July 1997 DEPARTMENT OF CROP SCIENCES DISEASE UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN SNOW MOLDS OF TURFGRASSES Snow molds are cold tolerant fungi that grow at freezing or near freezing temperatures. Snow molds can damage turfgrasses from late fall to spring and at snow melt or during cold, drizzly periods when snow is absent. It causes roots, stems, and leaves to rot when temperatures range from 25° to 60°F (-3° to 15°C). When the grass surface dries out and the weather warms, snow mold fungi cease to attack; however, infection can reappear in the area year after year. Snow molds are favored by excessive early fall applications of fast release nitrogenous fertilizers, Figure 1. Gray snow mold on a home lawn (courtesy R. Alden excessive shade, a thatch greater than 3/4 inch Miller). thick, or mulches of straw, leaves, synthetics, and other moisture-holding debris on the turf. Disease is most serious when air movement and soil drainage are poor and the grass stays wet for long periods, e.g., where snow is deposited in drifts or piles. All turfgrasses grown in the Midwest are sus- ceptible to one or more snow mold fungi. They include Kentucky and annual bluegrasses, fescues, bentgrasses, ryegrasses, bermudagrass, and zoysiagrasses with bentgrasses often more severely damaged than coarser turfgrasses. Figure 2. Pink snow mold or Fusarium patch. patches are 8-12 There are two types of snow mold in the inches across, covered with pink mold as snow melts (courtesy R.W. Smiley). Midwest: gray or speckled snow mold, also known as Typhula blight or snow scald, and pink snow mold or Fusarium patch. -
A Checklist of Clavarioid Fungi (Agaricomycetes) Recorded in Brazil
A checklist of clavarioid fungi (Agaricomycetes) recorded in Brazil ANGELINA DE MEIRAS-OTTONI*, LIDIA SILVA ARAUJO-NETA & TATIANA BAPTISTA GIBERTONI Departamento de Micologia, Universidade Federal de Pernambuco, Av. Nelson Chaves s/n, Recife 50670-420 Brazil *CORRESPONDENCE TO: [email protected] ABSTRACT — Based on an intensive search of literature about clavarioid fungi (Agaricomycetes: Basidiomycota) in Brazil and revision of material deposited in Herbaria PACA and URM, a list of 195 taxa was compiled. These are distributed into six orders (Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales) and 12 families (Aphelariaceae, Auriscalpiaceae, Clavariaceae, Clavulinaceae, Gomphaceae, Hymenochaetaceae, Lachnocladiaceae, Lentariaceae, Lepidostromataceae, Physalacriaceae, Pterulaceae, and Typhulaceae). Among the 22 Brazilian states with occurrence of clavarioid fungi, Rio Grande do Sul, Paraná and Amazonas have the higher number of species, but most of them are represented by a single record, which reinforces the need of more inventories and taxonomic studies about the group. KEY WORDS — diversity, taxonomy, tropical forest Introduction The clavarioid fungi are a polyphyletic group, characterized by coralloid, simple or branched basidiomata, with variable color and consistency. They include 30 genera with about 800 species, distributed in Agaricales, Cantharellales, Gomphales, Hymenochaetales, Polyporales and Russulales (Corner 1970; Petersen 1988; Kirk et al. 2008). These fungi are usually humicolous or lignicolous, but some can be symbionts – ectomycorrhizal, lichens or pathogens, being found in temperate, subtropical and tropical forests (Corner 1950, 1970; Petersen 1988; Nelsen et al. 2007; Henkel et al. 2012). Some species are edible, while some are poisonous (Toledo & Petersen 1989; Henkel et al. 2005, 2011). Studies about clavarioid fungi in Brazil are still scarce (Fidalgo & Fidalgo 1970; Rick 1959; De Lamônica-Freire 1979; Sulzbacher et al.