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Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Bathyal Zones of the Mediterranean Continental Slope: an Attempt
Publ: Espec. but. Esp. Oceanogr. 23. 1997: 23-33 P UBUCACIONES ESPECIALES L"lSTlTUTO ESP.I\NOL DE O CEANOGRAFIA ISSN; 021-1-7378 . ISBN: 81 ~19 1 -O 299-5 Ib Ministerio de Agriculrura, Pesca yAlimentacion , L997 Bathyal zones of the Mediterranean continental slope: An attempt c. C. Emig Centre d'Ocean ologie de Marseille (UMR-CNRS 6540) , Station Mari ne d 'Endoum e, Rue de la Batterie-des-Lions. 13007 Marseille, France. Received Febru ary 1996. A ccepted August 1 99 6. ABSTRACT On the con tine ntal slop e, th e bathyal can be divided into two zones, the upper bathya l and the middle bath yal, at the shelf break, which represents th e boun dary betwe en the coastal shelf environment an d the deep realm , located at about 100-110 m dep th. T he upper bathyal, previ ously considered a transitional zone, is characterised by distin ct physical, geological an d biol ogi cal features. Its bath ymen-ic extension is directly related to slope physiography, and its lower boun dary ge ne rally corresponds to the mud line. T his belt is governe d by specific abiotic factors with stee p physical grad ients (e.g., hydro dynam ics, salin ity, oxygen , temperat ure , sedirnen ts}. Major change in tbe benthic fauna is associated with major ch ange in these abiotic factors. The three main biocoeno ses are dominated by suspen sion-feed ing species, which are exclusive to th e Mediterran ean upper bathyal. Dep ending on water parameters, the limit between th e phytal and aphyta l systems gene ra lly occurs with in th e upper bathyal. -
Lithistid’ Tetractinellid
1 Systematics of ‘lithistid’ tetractinellid 2 demosponges from the Tropical Western 3 Atlantic – implications for phylodiversity 4 and bathymetric distribution 1,2 3 4 5 Astrid Schuster , Shirley A. Pomponi , Andrzej Pisera , Paco 5 6 1,7,8 1,8 6 Cardenas´ , Michelle Kelly , Gert Worheide¨ , and Dirk Erpenbeck 1 7 Department of Earth- & Environmental Sciences, Palaeontology and Geobiology, 8 Ludwig-Maximilians-Universitat¨ M ¨unchen, Richard-Wagner Str. 10, 80333 Munich, 9 Germany 2 10 Current address: Department of Biology, NordCEE, Southern University of Denmark, 11 Campusvej 55, 5300 M Odense, Denmark 3 12 Harbor Branch Oceanographic Institute, Florida Atlantic University, 5600 U.S. 1 North, 13 Ft Pierce, FL 34946, USA 4 14 Institute of Paleobiology, Polish Academy of Sciences, ul. Twarda 51/55, 00-818 15 Warszawa, Poland 5 16 Pharmacognosy, Department of Medicinal Chemistry, Uppsala University, Husargatan 17 3, 75123 Uppsala, Sweden 6 18 National Centre for Coasts and Oceans, National Institute of Water and Atmospheric 19 Research, Private Bag 99940, Newmarket, Auckland, 1149, New Zealand 7 20 SNSB-Bayerische Staatssammlung f ¨urPalaontologie¨ und Geologie, Richard-Wagner 21 Str. 10, 80333 Munich, Germany 8 22 GeoBio-CenterLMU, Ludwig-Maximilians-Universitat¨ M ¨unchen, Richard-Wagner Str. 10, 23 80333 Munich, Germany 24 Corresponding author: 1,8 25 Dirk Erpenbeck 26 Email address: [email protected] 27 ABSTRACT PeerJ Preprints | https://doi.org/10.7287/peerj.preprints.27673v1 | CC BY 4.0 Open Access | rec: 22 Apr 2019, publ: 22 Apr 2019 28 Background Among all present demosponges, lithistids represent a polyphyletic group with 29 exceptionally well preserved fossils dating back to the Cambrian. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Translation 3204
4 of 6 I' rÉ:1°.r - - - Ï''.ec.n::::,- - — TRANSLATION 3204 and Van, else--- de ,-0,- SERIES NO(S) ^4p €'`°°'°^^`m`^' TRANSLATION 3204 5 of 6 serceaesoe^nee SERIES NO.(S) serv,- i°- I' ann., Canada ° '° TRANSLATION 3204 6 of 6 SERIES NO(S) • =,-""r I FISHERIES AND MARINE SERVICE ARCHIVE:3 Translation Series No. 3204 Multidisciplinary investigations of the continental slope in the Gulf of Alaska area by Z.A. Filatova (ed.) Original title: Kompleksnyye issledovaniya materikovogo sklona v raione Zaliva Alyaska From: Trudy Instituta okeanologii im. P.P. ShirshoV (Publications of the P.P. Shirshov Oceanpgraphy Institute), 91 : 1-260, 1973 Translated by the Translation Bureau(HGC) Multilingual Services Division Department of the Secretary of State of Canada Department of the Environment Fisheries and Marine Service Pacific Biological Station Nanaimo, B.C. 1974 ; 494 pages typescriPt "DEPARTMENT OF THE SECRETARY OF STATE SECRÉTARIAT D'ÉTAT TRANSLATION BUREAU BUREAU DES TRADUCTIONS MULTILINGUAL SERVICES DIVISION DES SERVICES DIVISION MULTILINGUES ceÔ 'TRANSLATED FROM - TRADUCTION DE INTO - EN Russian English Ain HOR - AUTEUR Z. A. Filatova (ed.) ri TL E IN ENGLISH - TITRE ANGLAIS Multidisciplinary investigations of the continental slope in the Gulf of Aâaska ares TI TLE IN FORE I GN LANGuAGE (TRANS LI TERA TE FOREIGN CHARACTERS) TITRE EN LANGUE ÉTRANGÈRE (TRANSCRIRE EN CARACTÈRES ROMAINS) Kompleksnyye issledovaniya materikovogo sklona v raione Zaliva Alyaska. REFERENCE IN FOREI GN LANGUAGE (NAME: OF BOOK OR PUBLICATION) IN FULL. TRANSLI TERATE FOREIGN CHARACTERS, RÉFÉRENCE EN LANGUE ÉTRANGÈRE (NOM DU LIVRE OU PUBLICATION), AU COMPLET, TRANSCRIRE EN CARACTÈRES ROMAINS. Trudy Instituta okeanologii im. P.P. -
The EUNIS Habitat Classification. ICES CM 2000/T:04
Theme Session on Classification and Mapping of Marine Habitats CM 2000/T:04 The EUNIS Habitat Classification SUMMARY The EUNIS habitat classification has been developed on behalf of the European Environment Agency to facilitate description of marine and terrestrial European habitats through the use of criteria for habitat identification. It is a broadly-based hierarchical classification which provides an easily understood common language for habitats. It builds on earlier initiatives (CORINE and Palaearctic habitat classifications) and incorporates existing classifications used by European marine Conventions and the EU-funded BioMar project with cross-references to these and other systems. It is recognised that detailed biotopes from some marine regions are poorly represented and that EUNIS will need to be expanded to cover this wider geographic area. Most of the additions will probably be made at hierarchical level 5 (where the distinct BioMar and Mediterranean units are now held). Changes and additions to the classification will only be made following detailed consultation with experts. A key to the habitat units at each of the first three levels is incorporated and the classification is linked to a parameter-based database to describe specific habitats. The present draft of the EUNIS habitat classification was completed in November 1999 and is expected to remain stable for a time to allow validation and testing through field trials and descriptive parameters to be compiled. Cynthia E. Davies and Dorian Moss: CEH Monks Wood, Abbots Ripton, Huntingdon, Cambridgeshire, PE28 2LS, UK Tel: +44 (0)1487 772400 Fax: +44 (0)1487 773467 email: [email protected], [email protected] INTRODUCTION The European Environment Agency (EEA) Topic Centre on Nature Conservation (ETC/NC) is developing a European Nature Information System, EUNIS, which has two main aims: to facilitate use of data by promoting harmonisation of terminology and definitions and to be a reservoir of information on European environmentally important matters. -
Patterns of Bathymetric Zonation of Bivalves in the Porcupine Seabight and Adjacent Abyssal Plain, NE Atlantic
ARTICLE IN PRESS Deep-Sea Research I 52 (2005) 15–31 www.elsevier.com/locate/dsr Patterns of bathymetric zonation of bivalves in the Porcupine Seabight and adjacent Abyssal plain, NE Atlantic Celia Olabarriaà Southampton Oceanography Centre, DEEPSEAS Benthic Biology Group, Empress Dock, Southampton SO14 3ZH, UK Received 23 April2004; received in revised form 21 September 2004; accepted 21 September 2004 Abstract Although the organization patterns of fauna in the deep sea have been broadly documented, most studies have focused on the megafauna. Bivalves represent about 10% of the deep-sea macrobenthic fauna, being the third taxon in abundance after polychaetes and peracarid crustaceans. This study, based on a large data set, examined the bathymetric distribution, patterns of zonation and diversity–depth trends of bivalves from the Porcupine Seabight and adjacent Abyssal Plain (NE Atlantic). A total of 131,334 individuals belonging to 76 species were collected between 500 and 4866 m. Most of the species showed broad depth ranges with some ranges extending over more than 3000 m. Furthermore, many species overlapped in their depth distributions. Patterns of zonation were not very strong and faunal change was gradual. Nevertheless, four bathymetric discontinuities, more or less clearly delimited, occurred at about 750, 1900, 2900 and 4100 m. These boundaries indicated five faunistic zones: (1) a zone above 750 m marking the change from shelf species to bathyal species; (2) a zone from 750 to 1900 m that corresponds to the upper and mid- bathyalzones taken together; (3) a lowerbathyalzone from 1900 to 2900 m; (4) a transition zone from 2900 to 4100 m where the bathyal fauna meets and overlaps with the abyssal fauna and (5) a truly abyssal zone from approximately 4100–4900 m (the lower depth limit of this study), characterized by the presence of abyssal species with restricted depth ranges and a few specimens of some bathyalspecies with very broad distributions. -
Revision of Rhabdastrella Distincta (Thiele, 1900)
Revision of Rhabdastrella distincta (Thiele, 1900) A re-description of the holotype and description of two recently re-collected specimens Anne Twaalfhoven (10149996) Biology BSc Thesis, July 2016 University of Amsterdam: dr. P. (Peter) Roessingh, [email protected] Naturalis Biodiversity Center, Leiden: dr. N.J. (Nicole) de Voogd, [email protected] Abstract Sponge taxonomy is largely founded upon outdated descriptions originating from pre-modern times. Luckily, the material that these descriptions are based upon is often still available in Natural History Collections. In this article two sponge samples collected in 2009 from Ternate, Indonesia are compared to the type material of Rhabdastrella distincta. The holotype was described in 1896 by Thiele (1900). This article reviews the material for the first time ever since. The two recently collected samples are the first records of the species since its description. Descriptions of all three samples are based upon external morphology, skeletal structure, spicule measurements and spicule analysis by electron microscopy. It is revealed that, contrary to previous descriptions, the spherasters of R. distincta are stubbed with spines. Consequently, it is argued that the relation of R. distincta to its fellow species should be reconsidered. Euasters of R. distincta POR 5341 Twaalfhoven, July 2016, UvA Introduction When researching environmental change and biodiversity, Natural History Collections (NHC’s) can be of high value. Former taxonomists collected and described large collections of specimens that now serve as the foundation of our current knowledge on marine biodiversity (Jackson, 2001; Hooper & van Soest, 2002; Hoeksema et al, 2011). For reef systems, systematic ecological observations and methodological sampling started no earlier than the 1930’s (Jackson, 2001), and most recent surveys only encompass relatively short timespans (Jackson, 2001; van der Meij et al., 2010; Lister, 2011; Hoeksema et al., 2011). -
Molecular Phylogenetics Suggests a New Classification and Uncovers Convergent Evolution of Lithistid Demosponges
RESEARCH ARTICLE Deceptive Desmas: Molecular Phylogenetics Suggests a New Classification and Uncovers Convergent Evolution of Lithistid Demosponges Astrid Schuster1,2, Dirk Erpenbeck1,3, Andrzej Pisera4, John Hooper5,6, Monika Bryce5,7, Jane Fromont7, Gert Wo¨ rheide1,2,3* 1. Department of Earth- & Environmental Sciences, Palaeontology and Geobiology, Ludwig-Maximilians- Universita¨tMu¨nchen, Richard-Wagner Str. 10, 80333 Munich, Germany, 2. SNSB – Bavarian State Collections OPEN ACCESS of Palaeontology and Geology, Richard-Wagner Str. 10, 80333 Munich, Germany, 3. GeoBio-CenterLMU, Ludwig-Maximilians-Universita¨t Mu¨nchen, Richard-Wagner Str. 10, 80333 Munich, Germany, 4. Institute of Citation: Schuster A, Erpenbeck D, Pisera A, Paleobiology, Polish Academy of Sciences, ul. Twarda 51/55, 00-818 Warszawa, Poland, 5. Queensland Hooper J, Bryce M, et al. (2015) Deceptive Museum, PO Box 3300, South Brisbane, QLD 4101, Australia, 6. Eskitis Institute for Drug Discovery, Griffith Desmas: Molecular Phylogenetics Suggests a New Classification and Uncovers Convergent Evolution University, Nathan, QLD 4111, Australia, 7. Department of Aquatic Zoology, Western Australian Museum, of Lithistid Demosponges. PLoS ONE 10(1): Locked Bag 49, Welshpool DC, Western Australia, 6986, Australia e116038. doi:10.1371/journal.pone.0116038 *[email protected] Editor: Mikhail V. Matz, University of Texas, United States of America Received: July 3, 2014 Accepted: November 30, 2014 Abstract Published: January 7, 2015 Reconciling the fossil record with molecular phylogenies to enhance the Copyright: ß 2015 Schuster et al. This is an understanding of animal evolution is a challenging task, especially for taxa with a open-access article distributed under the terms of the Creative Commons Attribution License, which mostly poor fossil record, such as sponges (Porifera). -
Ocean Zones Adapted from USC Sea Grant “Island Explorers” by Dr
2011 COSEE-West Introduction to Ocean Zones Adapted from USC Sea Grant “Island Explorers” by Dr. Rachel Kennison, COSEE West Co- Director Grade: K-12 Group Size: 30 students Time: 55 minutes BACKGROUND In order to begin to understand life below the seafloor, it is essential to grasp that the ocean has many different habitats that are defined by the physical and chemical properties that exist at different depths. The purpose of this activity is to identify and describe different zones of the ocean and the organisms that live there. The ocean is divided into 5 main zones from the surface to the depths where light can no longer penetrate. These zones are characterized by different physical and chemical properties, such as quantity and quality of light, pressure and temperature. These properties affect what life forms can exist within those limitations. This activity introduces the microbial environment in the deep ocean, and can be the foundation to explain geothermal processes, and the evolution of bacteria. Labels and features to include on diagram: Photic (sunlit) zone Aphotic (no light) zone Neritic system Benthic realm Pelagic realm Bathyal zone Abyssal zone Hadal zone Shoreline Sea level Coral reef Continental Shelf Continental slope Continental rise Submarine Canyon Abyssal Plain Seamount Guyot Trench Mid-ocean Ridge Rift Valley Hydrothermal vent Sub-seafloor sediment Sub-seafloor aquifer A useful reference for your ocean zones diagram is at http://geosci.sfsu.edu/courses/geol102/ex9.html Two basic guides for the zones: (Source: Sea