Do We Know What the Early Visual System Does?
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MITOCW | 9: Receptive Fields - Intro to Neural Computation
MITOCW | 9: Receptive Fields - Intro to Neural Computation MICHALE FEE: So today, we're going to introduce a new topic, which is related to the idea of fine- tuning curves, and that is the notion of receptive fields. So most of you have probably been, at least those of you who've taken 9.01 or 9.00 maybe, have been exposed to the idea of what a receptive field is. The idea is basically that in sensory systems neurons receive input from the sensory periphery, and neurons generally have some kind of sensory stimulus that causes them to spike. And so one of the classic examples of how to find receptive fields comes from the work of Huble and Wiesel. So I'll show you some movies made from early experiments of Huble-Wiesel where they are recording in the visual cortex of the cat. So they place a fine metal electrode into a primary visual cortex, and they present. So then they anesthetize the cat so the cat can't move. They open the eye, and the cat's now looking at a screen that looks like this, where they play a visual stimulus. And they actually did this with essentially a slide projector that they could put a card in front of that had a little hole in it, for example, that allowed a spot of light to project onto the screen. And then they can move that spot of light around while they record from neurons in visual cortex and present different visual stimuli to the retina. -
The Roles and Functions of Cutaneous Mechanoreceptors Kenneth O Johnson
455 The roles and functions of cutaneous mechanoreceptors Kenneth O Johnson Combined psychophysical and neurophysiological research has nerve ending that is sensitive to deformation in the resulted in a relatively complete picture of the neural mechanisms nanometer range. The layers function as a series of of tactile perception. The results support the idea that each of the mechanical filters to protect the extremely sensitive recep- four mechanoreceptive afferent systems innervating the hand tor from the very large, low-frequency stresses and strains serves a distinctly different perceptual function, and that tactile of ordinary manual labor. The Ruffini corpuscle, which is perception can be understood as the sum of these functions. located in the connective tissue of the dermis, is a rela- Furthermore, the receptors in each of those systems seem to be tively large spindle shaped structure tied into the local specialized for their assigned perceptual function. collagen matrix. It is, in this way, similar to the Golgi ten- don organ in muscle. Its association with connective tissue Addresses makes it selectively sensitive to skin stretch. Each of these Zanvyl Krieger Mind/Brain Institute, 338 Krieger Hall, receptor types and its role in perception is discussed below. The Johns Hopkins University, 3400 North Charles Street, Baltimore, MD 21218-2689, USA; e-mail: [email protected] During three decades of neurophysiological and combined Current Opinion in Neurobiology 2001, 11:455–461 psychophysical and neurophysiological studies, evidence has accumulated that links each of these afferent types to 0959-4388/01/$ — see front matter © 2001 Elsevier Science Ltd. All rights reserved. a distinctly different perceptual function and, furthermore, that shows that the receptors innervated by these afferents Abbreviations are specialized for their assigned functions. -
Visual Cortex in Humans 251
Author's personal copy Visual Cortex in Humans 251 Visual Cortex in Humans B A Wandell, S O Dumoulin, and A A Brewer, using fMRI, and we discuss the main features of the Stanford University, Stanford, CA, USA V1 map. We then summarize the positions and proper- ties of ten additional visual field maps. This represents ã 2009 Elsevier Ltd. All rights reserved. our current understanding of human visual field maps, although this remains an active field of investigation, with more maps likely to be discovered. Finally, we Human visua l cortex comprises 4–6 billion neurons that are organ ized into more than a dozen distinct describe theories about the functional purpose and functional areas. These areas include the gray matter organizing principles of these maps. in the occi pital lobe and extend into the temporal and parietal lobes . The locations of these areas in the The Size and Location of Human Visual intact human cortex can be identified by measuring Cortex visual field maps. The neurons within these areas have a variety of different stimulus response proper- The entirety of human cortex occupies a surface area 2 ties. We descr ibe how to measure these visual field on the order of 1000 cm and ranges between 2 and maps, their locations, and their overall organization. 4 mm in thickness. Each cubic millimeter of cortex contains approximately 50 000 neurons so that neo- We then consider how information about patterns, objects, color s, and motion is analyzed and repre- cortex in the two hemispheres contain on the order of sented in these maps. -
Center Surround Receptive Field Structure of Cone Bipolar Cells in Primate Retina
Vision Research 40 (2000) 1801–1811 www.elsevier.com/locate/visres Center surround receptive field structure of cone bipolar cells in primate retina Dennis Dacey a,*, Orin S. Packer a, Lisa Diller a, David Brainard b, Beth Peterson a, Barry Lee c a Department of Biological Structure, Uni6ersity of Washington, Box 357420, Seattle, WA 98195-7420, USA b Department of Psychology, Uni6ersity of California Santa Barbara, Santa Barbara, CA, USA c Max Planck Institute for Biophysical Chemistry, Gottingen, Germany Received 28 September 1999; received in revised form 5 January 2000 Abstract In non-mammalian vertebrates, retinal bipolar cells show center-surround receptive field organization. In mammals, recordings from bipolar cells are rare and have not revealed a clear surround. Here we report center-surround receptive fields of identified cone bipolar cells in the macaque monkey retina. In the peripheral retina, cone bipolar cell nuclei were labeled in vitro with diamidino-phenylindole (DAPI), targeted for recording under microscopic control, and anatomically identified by intracellular staining. Identified cells included ‘diffuse’ bipolar cells, which contact multiple cones, and ‘midget’ bipolar cells, which contact a single cone. Responses to flickering spots and annuli revealed a clear surround: both hyperpolarizing (OFF) and depolarizing (ON) cells responded with reversed polarity to annular stimuli. Center and surround dimensions were calculated for 12 bipolar cells from the spatial frequency response to drifting, sinusoidal luminance modulated gratings. The frequency response was bandpass and well fit by a difference of Gaussians receptive field model. Center diameters were all two to three times larger than known dendritic tree diameters for both diffuse and midget bipolar cells in the retinal periphery. -
The Davida Teller Award Lecture, 2016 Visual Brain Development: A
Journal of Vision (2017) 17(3):26, 1–24 1 The Davida Teller Award Lecture, 2016 Visual Brain Development: A review of ‘‘Dorsal Stream Vulnerability’’—motion, mathematics, amblyopia, actions, and attention # Janette Atkinson University College London, London, UK $ Research in the Visual Development Unit on ‘‘dorsal stream vulnerability’ (DSV) arose from research in two Introduction somewhat different areas. In the first, using cortical milestones for local and global processing from our neurobiological model, we identified cerebral visual Emerging cortical function and infant cortical impairment in infants in the first year of life. In the impairment second, using photo/videorefraction in population refractive screening programs, we showed that infant The work discussed at the beginning of this review spectacle wear could reduce the incidence of strabismus arose out of the first twenty years of my research with and amblyopia, but many preschool children, who had Oliver Braddick and our team in the Visual Develop- been significantly hyperopic earlier, showed visuo-motor ment Unit in Cambridge, particularly John Wattam- and attentional deficits. This led us to compare Bell and Shirley Anker (Atkinson, 2000). We began by developing dorsal and ventral streams, using sensitivity devising new methods, both behavioral (automated to global motion and form as signatures, finding deficits forced-choice preferential looking) and electrophysio- in motion sensitivity relative to form in children with logical (steady-state VEP/VERP—Visual Evoked Po- Williams syndrome, or perinatal brain injury in tential/Visual Event Related Potential) to measure the hemiplegia or preterm birth. Later research showed that normal visual capacities of infants such as acuity and this DSV was common across many disorders, both ‘‘ ’’ contrast sensitivity, over the first years of life (Atkin- genetic and acquired, from autism to amblyopia. -
VISUAL NEUROSCIENCE Spring 2019
PSYC/BIBB/VLST 217 VISUAL NEUROSCIENCE Spring 2019 Spring 2019 Lecture: MWF 9-10a, Leidy Labs 10 Prerequisites: PSCY 1, BIBB 109, VLST 101, or COGS 001 Synopsis: An introduction to the scientific study of vision, with an emphasis on the biological substrate and its relation to behavior. Topics will typically include physiological optics, transduction of light, visual thresholds, color vision, anatomy and physiology of the visual pathways, and the cognitive neuroscience of vision. Instructor: Alan A. Stocker, Ph.D. Office: Goddard Labs Rm 421, 3710 Hamilton Walk Phone: (215) 573 9341 Email: [email protected] Office hour: W 12-1p Teaching Assistant: Lingqi Zhang Email: [email protected] Office hour: T 5-6p, TR 5-6p Office hour location: Goddard Labs Rm 420, 3710 Hamilton Walk Course Website (CANVAS): The course has a dedicated CANVAS site. Lecture slides, homework assignments, and reading assignments/material will be posted there. Also, check the site frequently for posted announcements and Q & As on the discussion board. In general, this is the place to go first if you have any question or are in need of any information regarding the course. Requirements: Homework1-3 posted on canvas Midterm Exam 1 February 15 (in class) Midterm Exam 2 March 29 (in class) Midterm Exam 3 April 26 (in class) Final Exam (cumulative) May 13, 12-2p Policy on homework assignments: Homework assignments are essential for a proper understanding of the material. There will be three homework assignments, meant in part as preparation for each midterm exam. Assignments and due dates will be posted on CANVAS. -
Perception, As You Make It
Perception, As You Make It Behavioral & Brain Sciences commentary on Chaz Firestone & Brian Scholl, “Cognition does not affect perception: Evaluating the evidence for ‘top-down’ effects" David W. Vinson, University of California, Merced, Drew H. Abney, University of California, Merced Dima Amso, Brown University Anthony Chemero, University of Cincinnati James E. Cutting, Cornell University Rick Dale, University of California, Merced Jonathan B. Freeman, New York University Laurie B. Feldman, The University at Albany, SUNY Karl J. Friston, University College London Shaun Gallagher, University of Memphis J. Scott Jordan, Illinois State University Liad Mudrik, Tel Aviv University Sasha Ondobaka, University College London Daniel C. Richardson, University College London Ladan Shams, University of California, Los Angeles Maggie Shiffrar, California State University, Northridge Michael J. Spivey, University of California, Merced Abstract: The main question F&S pose is whether “what and how we see is functionally independent from what and how we think, know, desire, act, etc.” We synthesize a collection of concerns from an interdisciplinary set of co-authors regarding F&S’s assumptions and appeals to intuition, resulting in their treatment of visual perception as context-free. No perceptual task takes place in a contextual vacuum. How do we know that an effect is one of perception qua perception that does not involve other cognitive contributions? Experimental instructions alone involve various cognitive factors that guide task performance (Roepstorff & Frith, 2004). Even a request to detect simple stimulus features requires participants to understand the instructions (“language, memory”), keep track of them (“working memory”), become sensitive to them (“attention”), and pick up the necessary information to become appropriately sensitive (“perception”). -
The Visual System: Higher Visual Processing
The Visual System: Higher Visual Processing Primary visual cortex The primary visual cortex is located in the occipital cortex. It receives visual information exclusively from the contralateral hemifield, which is topographically represented and wherein the fovea is granted an extended representation. Like most cortical areas, primary visual cortex consists of six layers. It also contains, however, a prominent stripe of white matter in its layer 4 - the stripe of Gennari - consisting of the myelinated axons of the lateral geniculate nucleus neurons. For this reason, the primary visual cortex is also referred to as the striate cortex. The LGN projections to the primary visual cortex are segregated. The axons of the cells from the magnocellular layers terminate principally within sublamina 4Ca, and those from the parvocellular layers terminate principally within sublamina 4Cb. Ocular dominance columns The inputs from the two eyes also are segregated within layer 4 of primary visual cortex and form alternating ocular dominance columns. Alternating ocular dominance columns can be visualized with autoradiography after injecting radiolabeled amino acids into one eye that are transported transynaptically from the retina. Although the neurons in layer 4 are monocular, neurons in the other layers of the same column combine signals from the two eyes, but their activation has the same ocular preference. Bringing together the inputs from the two eyes at the level of the striate cortex provide a basis for stereopsis, the sensation of depth perception provided by binocular disparity, i.e., when an image falls on non-corresponding parts of the two retinas. Some neurons respond to disparities beyond the plane of fixation (far cells), while others respond to disparities in front of the plane of the fixation (near cells). -
Principles of Image Representation in Visual Cortex
In: The Visual Neurosciences, L.M. Chalupa, J.S. Werner, Eds. MIT Press, 2003: 1603-1615. Principles of Image Representation in Visual Cortex Bruno A. Olshausen Center for Neuroscience, UC Davis [email protected] 1 Introduction data. Neuroscientists are interested in understand- ing how the cortex extracts certain properties of the The visual cortex is responsible for most of our con- visual environment—surfaces, objects, textures, mo- scious perception of the visual world, yet we remain tion, etc.—from the data stream coming from the largely ignorant of the principles underlying its func- retina. Similarly, engineers are interested in design- tion despite progress on many fronts of neuroscience. ing algorithms capable of extracting structure con- The principal reason for this is not a lack of data, tained in images or sound—for example, to identify but rather the absence of a solid theoretical frame- and label parts within the body from medical imag- work for motivating experiments and interpreting ing data. These problems at their core are one in the findings. The situation may be likened to trying same, and progress in one domain will likely lead to to understand how birds fly without knowledge of new insights in the other. the principles of aerodynamics: no amount of ex- The key difficulty faced by both sides is that the perimentation or measurements made on the bird core principles of pattern analysis are not well un- itself will reveal the secret. The key experiment— derstood. No amount of experimentation or techno- measuring air pressure above and below the wing as logical tinkering alone can overcome this obstacle. -
Seeing in Three Dimensions: the Neurophysiology of Stereopsis Gregory C
Review DeAngelis – Neurophysiology of stereopsis Seeing in three dimensions: the neurophysiology of stereopsis Gregory C. DeAngelis From the pair of 2-D images formed on the retinas, the brain is capable of synthesizing a rich 3-D representation of our visual surroundings. The horizontal separation of the two eyes gives rise to small positional differences, called binocular disparities, between corresponding features in the two retinal images. These disparities provide a powerful source of information about 3-D scene structure, and alone are sufficient for depth perception. How do visual cortical areas of the brain extract and process these small retinal disparities, and how is this information transformed into non-retinal coordinates useful for guiding action? Although neurons selective for binocular disparity have been found in several visual areas, the brain circuits that give rise to stereoscopic vision are not very well understood. I review recent electrophysiological studies that address four issues: the encoding of disparity at the first stages of binocular processing, the organization of disparity-selective neurons into topographic maps, the contributions of specific visual areas to different stereoscopic tasks, and the integration of binocular disparity and viewing-distance information to yield egocentric distance. Some of these studies combine traditional electrophysiology with psychophysical and computational approaches, and this convergence promises substantial future gains in our understanding of stereoscopic vision. We perceive our surroundings vividly in three dimen- lished the first reports of disparity-selective neurons in the sions, even though the image formed on the retina of each primary visual cortex (V1, or area 17) of anesthetized cats5,6. -
COGS 101A: Sensation and Perception 1
COGS 101A: Sensation and Perception 1 Virginia R. de Sa Department of Cognitive Science UCSD Lecture 4: Coding Concepts – Chapter 2 Course Information 2 • Class web page: http://cogsci.ucsd.edu/ desa/101a/index.html • Professor: Virginia de Sa ? I’m usually in Chemistry Research Building (CRB) 214 (also office in CSB 164) ? Office Hours: Monday 5-6pm ? email: desa at ucsd ? Research: Perception and Learning in Humans and Machines For your Assistance 3 TAS: • Jelena Jovanovic OH: Wed 2-3pm CSB 225 • Katherine DeLong OH: Thurs noon-1pm CSB 131 IAS: • Jennifer Becker OH: Fri 10-11am CSB 114 • Lydia Wood OH: Mon 12-1pm CSB 114 Course Goals 4 • To appreciate the difficulty of sensory perception • To learn about sensory perception at several levels of analysis • To see similarities across the sensory modalities • To become more attuned to multi-sensory interactions Grading Information 5 • 25% each for 2 midterms • 32% comprehensive final • 3% each for 6 lab reports - due at the end of the lab • Bonus for participating in a psych or cogsci experiment AND writing a paragraph description of the study You are responsible for knowing the lecture material and the assigned readings. Read the readings before class and ask questions in class. Academic Dishonesty 6 The University policy is linked off the course web page. You will all have to sign a form in section For this class: • Labs are done in small groups but writeups must be in your own words • There is no collaboration on midterms and final exam Last Class 7 We learned about the cells in the Retina This Class 8 Coding Concepts – Every thing after transduction (following Chris Johnson’s notes) Remember:The cells in the retina are neurons 9 neurons are specialized cells that transmit electrical/chemical information to other cells neurons generally receive a signal at their dendrites and transmit it electrically to their soma and axon. -
Understanding the Effective Receptive Field in Deep Convolutional Neural Networks
Understanding the Effective Receptive Field in Deep Convolutional Neural Networks Wenjie Luo∗ Yujia Li∗ Raquel Urtasun Richard Zemel Department of Computer Science University of Toronto {wenjie, yujiali, urtasun, zemel}@cs.toronto.edu Abstract We study characteristics of receptive fields of units in deep convolutional networks. The receptive field size is a crucial issue in many visual tasks, as the output must respond to large enough areas in the image to capture information about large objects. We introduce the notion of an effective receptive field, and show that it both has a Gaussian distribution and only occupies a fraction of the full theoretical receptive field. We analyze the effective receptive field in several architecture designs, and the effect of nonlinear activations, dropout, sub-sampling and skip connections on it. This leads to suggestions for ways to address its tendency to be too small. 1 Introduction Deep convolutional neural networks (CNNs) have achieved great success in a wide range of problems in the last few years. In this paper we focus on their application to computer vision: where they are the driving force behind the significant improvement of the state-of-the-art for many tasks recently, including image recognition [10, 8], object detection [17, 2], semantic segmentation [12, 1], image captioning [20], and many more. One of the basic concepts in deep CNNs is the receptive field, or field of view, of a unit in a certain layer in the network. Unlike in fully connected networks, where the value of each unit depends on the entire input to the network, a unit in convolutional networks only depends on a region of the input.