Appendix 9-Final Marine Ecological Assessment
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Carcinus Maenas in South Africa: Status, Impacts and Management
Carcinus maenas in South Africa: status, impacts and management Clova Airth Mabin Dissertation presented for the degree of Doctor of Philosophy (Zoology) Department of Botany and Zoology Stellenbosch University Supervisor: Dr Tammy Robinson-Smythe Co-supervisors: Prof John Wilson Prof Jaco Le Roux March 2018 Stellenbosch University https://scholar.sun.ac.za Declaration By submitting this dissertation electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third-party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. I would like to declare that Dr Henning Winker at the Department of Agriculture, Forestry and Fisheries developed the code for the Bayesian depletion model used in Chapter 3. This allowed me to use the data collected during management of Carcinus to estimate the population’s response to the intervention. Throughout the thesis, the term Carcinus is used when referring to South African populations of crabs from this genus. This is a result of the detection of hybrids between C. maenas and C. aestuarii in Chapter 5, and the recognition that the results obtained in this thesis can thus not be ascribed to a particular Carcinus species. During the management programme, I played the role of lead scientist, co-ordinating the research and contributing to decisions regarding the management plan. During the course of my doctoral studies, I also completed the field work for and published the following paper: Mabin CA, Wilson JR, Robinson TB (2015) The Chilean black urchin, Tetrapygus niger (Molina, 1782) in South Africa: gone but not forgotten. -
TNP SOK 2011 Internet
GARDEN ROUTE NATIONAL PARK : THE TSITSIKAMMA SANP ARKS SECTION STATE OF KNOWLEDGE Contributors: N. Hanekom 1, R.M. Randall 1, D. Bower, A. Riley 2 and N. Kruger 1 1 SANParks Scientific Services, Garden Route (Rondevlei Office), PO Box 176, Sedgefield, 6573 2 Knysna National Lakes Area, P.O. Box 314, Knysna, 6570 Most recent update: 10 May 2012 Disclaimer This report has been produced by SANParks to summarise information available on a specific conservation area. Production of the report, in either hard copy or electronic format, does not signify that: the referenced information necessarily reflect the views and policies of SANParks; the referenced information is either correct or accurate; SANParks retains copies of the referenced documents; SANParks will provide second parties with copies of the referenced documents. This standpoint has the premise that (i) reproduction of copywrited material is illegal, (ii) copying of unpublished reports and data produced by an external scientist without the author’s permission is unethical, and (iii) dissemination of unreviewed data or draft documentation is potentially misleading and hence illogical. This report should be cited as: Hanekom N., Randall R.M., Bower, D., Riley, A. & Kruger, N. 2012. Garden Route National Park: The Tsitsikamma Section – State of Knowledge. South African National Parks. TABLE OF CONTENTS 1. INTRODUCTION ...............................................................................................................2 2. ACCOUNT OF AREA........................................................................................................2 -
Linefish Resilience in the Anthropocene
LINEFISH RESILIENCE IN THE ANTHROPOCENE: th The Proceedings of the 5 Southern African Marine Linefish Symposium Taryn Murray, Murray Duncan, Alex Winkler, Amber-Robyn Childs, Bruce Mann, Warren Potts (Editors) ©Steve Benjamin, AnthonyJudy Bernard, Mann & Brett Pringle Acknowledgements This work would not have been possible without the contributions of scientists. The South African Institute for Aquatic Biodiversity is thanked for their sponsorship of five student bursaries, and the National Research Foundation’s Knowledge, Interchange and Collaboration grant (no. KIC 180829354741) is acknowledged for providing funding for the keynote speaker, Dr Stephen Brouwer, to attend the symposium. Key funders Rhodes University South African Institute for Aquatic Biodiversity Citation Murray TS, Duncan MI, Winkler AC, Childs A-R, Mann BQ, Potts WM (eds). 2020. Linefish resilience in the Anthropocene: The Proceedings of the 5th Southern African Marine Linefish Symposium. Rhodes University, Makhanda, 113pp. Linefish Resilience in the Anthropocene The Proceedings of the 5th Southern African Marine Linefish Symposium Held at Mpekweni Beach Resort, Eastern Cape 8th to 11th July 2019 Edited by Taryn Murray (South African Institute for Aquatic Biodiversity) Murray Duncan (Department of Ichthyology and Fisheries Science, Rhodes University) Alex Winkler (Department of Ichthyology and Fisheries Science, Rhodes University) Amber-Robyn Childs (Department of Ichthyology and Fisheries Science, Rhodes University) Bruce Mann (Oceanographic Research Institute, South -
A Molecular Phylogeny of the Sparidae (Perciformes: Percoidei)
W&M ScholarWorks Dissertations, Theses, and Masters Projects Theses, Dissertations, & Master Projects 2000 A molecular phylogeny of the Sparidae (Perciformes: Percoidei) Thomas M. Orrell College of William and Mary - Virginia Institute of Marine Science Follow this and additional works at: https://scholarworks.wm.edu/etd Part of the Genetics Commons, and the Zoology Commons Recommended Citation Orrell, Thomas M., "A molecular phylogeny of the Sparidae (Perciformes: Percoidei)" (2000). Dissertations, Theses, and Masters Projects. Paper 1539616799. https://dx.doi.org/doi:10.25773/v5-x8gj-1114 This Dissertation is brought to you for free and open access by the Theses, Dissertations, & Master Projects at W&M ScholarWorks. It has been accepted for inclusion in Dissertations, Theses, and Masters Projects by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. INFORMATION TO USERS This manuscript has been reproduced from the microfilm master. UMI films the text directly from (he original or copy submitted. Thus, some thesis and dissertation copies are in typewriter face, while others may be from any type of computer printer. The quality of this reproduction is dependent upon the quality of the copy submitted. Broken or indistinct print, colored or poor quality illustrations and photographs, print bieedthrough, substandard margins, and improper alignment can adversely affect reproduction. In the unlikely event that the author did not send UMI a complete manuscript and there are missing pages, these will be noted. Also, if unauthorized copyright material had to be removed, a note will indicate the deletion. Oversize materials (e.g., maps, drawings, charts) are reproduced by sectioning the original, beginning at the upper left-hand comer and continuing from left to right in equal sections with small overlaps. -
Connectivity Between Marine Reserves and Exploited Areas in the Philopatric Reef Wsh Chrysoblephus Laticeps (Teleostei: Sparidae)
Mar Biol (2010) 157:2029–2042 DOI 10.1007/s00227-010-1471-z ORIGINAL PAPER Connectivity between marine reserves and exploited areas in the philopatric reef Wsh Chrysoblephus laticeps (Teleostei: Sparidae) P. R. Teske · F. R. G. Forget · P. D. Cowley · S. von der Heyden · L. B. Beheregaray Received: 9 February 2010 / Accepted: 3 May 2010 / Published online: 3 June 2010 © Springer-Verlag 2010 Abstract ‘No-take’ marine protected areas (MPAs) are phus laticeps, is an overexploited, commercially important successful in protecting populations of many exploited Wsh sparid endemic to South Africa. Post-recruits display resi- species, but it is often unclear whether networks of MPAs dent behavior and occupy small home ranges, making are adequately spaced to ensure connectivity among C. laticeps a suitable model species to study genetic structure reserves, and whether there is spillover into adjacent in marine teleosts with potentially low dispersal ability. We exploited areas. Such issues are particularly important in used multilocus data from two types of highly variable species with low dispersal potential, many of which exist as genetic markers (mitochondrial DNA control region and genetically distinct regional stocks. The roman, Chrysoble- seven microsatellite markers) to clarify patterns of genetic connectivity and population structure in C. laticeps using samples from two MPAs and several moderately or Communicated by M. I. Taylor. severely exploited regions. Despite using analytical tools that are sensitive to detect even subtle genetic structure, we P. R. Teske · L. B. Beheregaray found that this species exists as a single, well-mixed stock School of Biological Sciences, Flinders University, Adelaide, SA 5001, Australia throughout its core distribution. -
Sperm Competition and Sex Change: a Comparative Analysis Across Fishes
ORIGINAL ARTICLE doi:10.1111/j.1558-5646.2007.00050.x SPERM COMPETITION AND SEX CHANGE: A COMPARATIVE ANALYSIS ACROSS FISHES Philip P. Molloy,1,2,3 Nicholas B. Goodwin,1,4 Isabelle M. Cot ˆ e, ´ 3,5 John D. Reynolds,3,6 Matthew J. G. Gage1,7 1Centre for Ecology, Evolution and Conservation, School of Biological Sciences, University of East Anglia, Norwich, NR4 7TJ, United Kingdom 2E-mail: [email protected] 3Department of Biological Sciences, Simon Fraser University, Burnaby, British Columbia, V5A 1S6, Canada 4E-mail: [email protected] 5E-mail: [email protected] 6E-mail: [email protected] 7E-mail: [email protected] Received October 2, 2006 Accepted October 26, 2006 Current theory to explain the adaptive significance of sex change over gonochorism predicts that female-first sex change could be adaptive when relative reproductive success increases at a faster rate with body size for males than for females. A faster rate of reproductive gain with body size can occur if larger males are more effective in controlling females and excluding competitors from fertilizations. The most simple consequence of this theoretical scenario, based on sexual allocation theory, is that natural breeding sex ratios are expected to be female biased in female-first sex changers, because average male fecundity will exceed that of females. A second prediction is that the intensity of sperm competition is expected to be lower in female-first sex-changing species because larger males should be able to more completely monopolize females and therefore reduce male–male competition during spawning. -
Exploitation May Influence the Climate Resilience of Fish Populations
www.nature.com/scientificreports OPEN Exploitation may infuence the climate resilience of fsh populations through removing high Received: 29 April 2019 Accepted: 2 July 2019 performance metabolic phenotypes Published: xx xx xxxx Murray I. Duncan 1,2, Amanda E. Bates3, Nicola C. James2 & Warren M. Potts1 Physiological rates and processes underpin the relationships between ectothermic organisms, such as fsh, and their environment. The response and persistence of fsh populations in an increasingly variable ocean is dependent on the distribution and diversity of physiological phenotypes. Growing evidence suggests that fsheries exploitation can selectively target certain physiological and behavioural phenotypes, which may shift exploited populations to altered physiological states. Here we test if commercial fsheries have the potential to do this in a “natural laboratory” along the South African coast. We compare metabolic traits of exploited and protected populations of the fsh species, Chrysoblephus laticeps, which is a major component of the South African hook and line fshery. We fnd that high-performance aerobic scope phenotypes are reduced in the fshed population. The most likely mechanism for this fnding is a positive relationship between aerobic scope and capture vulnerability in passive-gear fsheries. Our results further highlight the selective nature of capture-fsheries and suggest that exploitation has the capacity to alter climate responses of fsh populations on a physiological level. Our fnding also implicates how Marine Protected Areas, through harbouring individuals with a greater diversity of physiological traits, may provide greater fsh response diversity to environmental variability. Wild fsh populations are increasingly challenged to persist in an ocean that is being reshaped by rapidly increas- ing temperatures, acidifcation, expansion of oxygen dead zones, and higher frequencies and magnitudes of extreme weather events1–5. -
Bait Increases the Precision in Count Data from Remote Underwater Video for Most Subtidal Reef Fish in the Warm-Temperate Agulhas Bioregion
Vol. 471: 235–252, 2012 MARINE ECOLOGY PROGRESS SERIES Published December 19 doi: 10.3354/meps10039 Mar Ecol Prog Ser Bait increases the precision in count data from remote underwater video for most subtidal reef fish in the warm-temperate Agulhas bioregion A. T. F. Bernard1,2,*, A. Götz2 1Zoology and Entomology Department, Rhodes University, Grahamstown 6139, South Africa 2Elwandle Node, South African Environmental Observation Network, Grahamstown 6139, South Africa ABSTRACT: Baited remote underwater video (BRUV) has been identified in the literature as a powerful long-term monitoring tool for subtidal rocky reef fish communities. To test this, a repeated-measures field experiment comparing unbaited remote underwater video (RUV) with BRUV was conducted in the Tsitsikamma National Park Marine Protected Area between June 2008 and February 2010. The results demonstrate that BRUV was more efficient at surveying the entire fish community, specifically invertebrate carnivores, generalist carnivores and cartilagi- nous species. On the other hand, RUV was more effective at surveying microinvertebrate carni- vores. High variability in the RUV data resulted in the method requiring a greater number of samples to achieve the same diagnostic power as BRUV. However, RUV required a shorter deployment and post-sampling video analysis time, making it more time efficient. Baited remote underwater video was more sensitive in the detection of differences in abundance between habi- tat types, while the RUV data were more prone to an intra-species methodological bias linked to the percentage of reef visible in the frame of view. The scale of the response to the presence of bait was inconsistent among species, indicating that behaviour determined the area surveyed within the bait plume of BRUV. -
An Investigation of the Reproductive Mode of the Pinfish, Lagodon Rhomboides Linnaeus (Osteichthyes: Sparidae) Richard P
Northeast Gulf Science Volume 12 Article 3 Number 2 Number 2 10-1992 An Investigation of the Reproductive Mode of the Pinfish, Lagodon rhomboides Linnaeus (Osteichthyes: Sparidae) Richard P. Cody Louisiana State University Stephen A. Bortone University of West Florida DOI: 10.18785/negs.1202.03 Follow this and additional works at: https://aquila.usm.edu/goms Recommended Citation Cody, R. P. and S. A. Bortone. 1992. An Investigation of the Reproductive Mode of the Pinfish, Lagodon rhomboides Linnaeus (Osteichthyes: Sparidae). Northeast Gulf Science 12 (2). Retrieved from https://aquila.usm.edu/goms/vol12/iss2/3 This Article is brought to you for free and open access by The Aquila Digital Community. It has been accepted for inclusion in Gulf of Mexico Science by an authorized editor of The Aquila Digital Community. For more information, please contact [email protected]. Cody and Bortone: An Investigation of the Reproductive Mode of the Pinfish, Lagodon Northeast Gulf Science Vol. 12, No. 2 October 1992 p. 99·110 AN INVESTIGATION OF THE REPRODUCTIVE MODE OF THE PINFISH, Lagodon rhomboides Linnaeus (Osteichthys: Sparidae) Richard P. Cody Museum of Natural Science Louisiana State University Baton Rouge, LA 70803 and Stephen A. Bortone Dep<irtment of Biology University of West Florida Pensacola, FL 32514 ABSTRACT: The majority of spa rids studied have shown evidence of hermaphroditism. The reproductive mode of the pinfish was investigated using museum and field collections of pinfish (n =974) distributed in size from 13 to 276 mm SL. The observed female to male sex ratio of 1.3:1.0 was not ~niflcantly different from uniformity. -
Bennett 2007
CORE Metadata, citation and similar papers at core.ac.uk Provided by South East Academic Libraries System (SEALS) OPTIMISATION OF A SAMPLING PROTOCOL FOR LONG-TERM MONITORING OF TEMPERATE REEF FISHES A thesis submitted in fulfilment of the requirements for the degree of MASTER OF SCIENCE of RHODES UNIVERSITY by RHETT HAMILTON BENNETT June 2007 ABSTRACT Marine Protected Areas (MPAs), the Ecosystem Approach to Fisheries management (EAF) and Integrated Coastal Management (ICM) have been identified as possible alternatives to traditional linefish management measures, which have largely failed. Monitoring and assessment of fish communities on a long-term basis is necessary, and will provide a means to evaluate the effectiveness of such management measures. Therefore, standardised protocols and optimal sampling methods for long-term monitoring (LTM) and assessment of coastal fish communities are essential. This study aimed to identify suitable methods and develop a protocol for assessment of inshore reef fish communities. A suitable location for evaluation of proposed methods was identified in the warm temperate biogeographical region of South Africa, encompassing the well-established Tsitsikamma Coastal National Park MPA and an adjacent exploited area. Chrysoblephus laticeps (roman) was identified as an indicator species for the study, as it has been well-studied and is well represented in the area. Underwater visual census (UVC) and controlled fishing were identified as suitable methods. UVC transects were found to be superior to point counts, in terms of sampling efficiency, variability, bias and required sample size. An effort of two angler hours per fishing station was shown to provide low catch variability, while at the same time a representative catch and low overall cost and required time. -
Movement Behaviour of Three South African Inshore Sparid Species In
Movement behaviour of three South African inshore sparid species in rocky intertidal and shallow subtidal habitats Submitted in fulfilment of the requirements for the degree of Master of Science of Rhodes University, Grahamstown, South Africa By Peter Andrew Watt-Pringle August 2009 Abstract Abstract This study investigated the movement behaviour of three inshore South African sparids – blacktail ( Diplodus sargus capensis ), zebra ( Diplodus cervinus hottentotus ) and white musselcracker ( Sparodon durbanensis ), popular inshore fishery species caught in appreciable numbers along much of the South African coast. The first study component examined movements of juveniles in a rocky intertidal nursery area at Schoenmakerskop near Port Elizabeth. Juveniles in a single gully were tagged with Visible Implant Elastomer (VIE) and resighted at the study site on snorkelling gear over a seven-month period. Tagged zebra and musselcracker displayed limited movement between potential low tide refuges, being observed repeatedly in the same gully over the full duration of the study. However, blacktail displayed greater movements and were seen infrequently in the later period of the study, probably having undergone an ontogenetic habitat shift to subtidal areas. There was evidence that blacktail maintain use of their intertidal nursery over high tide, during which the other two species moved into shallower areas adjacent to their low tide refuge. The results of three national tagging programs were analysed to determine the movement patterns of adolescent and adult fishes. The coast-wide ORI-WWF National Voluntary Tagging Program and two dedicated research programs in marine protected areas (MPAs) at De Hoop MPA and Tsitsikamma National Park (TNP) recorded few large-scale movements of tagged adult blacktail, zebra and juvenile musselcracker. -
Towards Standardised Reef Fish Monitoring; an Assessment of Stereo-Video Techniques to Sample Shallow and Deep Reef Fish Assemblages
Towards standardised reef fish monitoring; An assessment of stereo-video techniques to sample shallow and deep reef fish assemblages A thesis submitted in fulfilment of the requirements for the degree of Master of Science at Rhodes University by Sarah Jane Halse March 2016 RHODES UNIVERSITY Where leaders learn Abstract Baited remote underwater stereo-video systems (stereo-BRUVs) were developed to determine fish abundance and size structure in a more unbiased, and relatively non-invasive manner across a broader range of depths and habitats than conventional sampling methods achieve. These characteristics make stereo-BRUVs particularly useful for research inside marine protected areas (MPAs) where researchers are required to minimize disturbance to the protected environment. Although stereo-BRUVs have been widely used around the world, they are novel to South Africa and standardised protocols for their application are required. As such, this study aimed to address i) the effect of different bait types, namely pilchard (Sardinops sagax), squid (Loligo reynaudi) and bivalves (Crassostrea gigas and Perna perna) on the observed reef fish assemblage structure and ii) the effect of artificial illumination (lighting) on the observed reef fish assemblage structure sampled with stereo-BRUVs. One key component of the stereo-BRUVs methodology is the application of bait to attract fish into the field of view. Globally, pilchard is the most often used bait type for stereo- BRUVs, however, its suitability has never been tested comparatively against other bait types for South African conditions. Significant differences in fish abundance and assemblage structure were recorded between stereo-BRUVs deployments when applying the different bait types.