Intracolonial Variation in Siderastrea De Blainville, 1830 (Anthozoa, Scleractinia): Taxonomy Under Challenging Morphological Constraints
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Genetic Variation in Heat Tolerance of the Coral Platygyra Daedalea Offers the Potential for 2 Adaptation to Ocean Warming
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.13.337089; this version posted October 17, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Title: Genetic variation in heat tolerance of the coral Platygyra daedalea offers the potential for 2 adaptation to ocean warming. 3 4 Running head: Genetics of corals’ heat tolerance 5 6 Holland Elder1* 7 Virginia Weis1 8 Jose Montalvo-Proano2,3 9 Veronique J.L Mocellin2 10 Andrew H. Baird3 11 Eli Meyer1, 4 12 Line K. Bay2, 4 13 14 1. Oregon State University, Corvallis, OR, USA. 97331 15 2. Australian Institute of Marine Science, 1526 Cape Cleveland Road, Cape Cleveland 16 4810, Queensland, Australia 17 AIMS@JCU 18 3. ARC Centre of Excellence for Coral Reef Studies, James Cook University, 1 James Cook 19 Dr, Douglas QLD 4814, Australia 20 4. These authors contributed equally 21 22 *corresponding author 23 760-622-9116 24 [email protected] 25 26 Keywords: coral reefs; resilience, heritability, genomic markers, allele frequency change 27 28 Paper type: Primary research article. 29 Global Change Biology 30 bioRxiv preprint doi: https://doi.org/10.1101/2020.10.13.337089; this version posted October 17, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 31 Abstract 32 Reef-building corals are foundational species in coral reef ecosystems and are threatened 33 by many stressors including rising ocean temperatures. -
Regional Studies in Marine Science Reef Condition and Protection Of
Regional Studies in Marine Science 32 (2019) 100893 Contents lists available at ScienceDirect Regional Studies in Marine Science journal homepage: www.elsevier.com/locate/rsma Reef condition and protection of coral diversity and evolutionary history in the marine protected areas of Southeastern Dominican Republic ∗ Camilo Cortés-Useche a,b, , Aarón Israel Muñiz-Castillo a, Johanna Calle-Triviño a,b, Roshni Yathiraj c, Jesús Ernesto Arias-González a a Centro de Investigación y de Estudios Avanzados del I.P.N., Unidad Mérida B.P. 73 CORDEMEX, C.P. 97310, Mérida, Yucatán, Mexico b Fundación Dominicana de Estudios Marinos FUNDEMAR, Bayahibe, Dominican Republic c ReefWatch Marine Conservation, Bandra West, Mumbai 400050, India article info a b s t r a c t Article history: Changes in structure and function of coral reefs are increasingly significant and few sites in the Received 18 February 2019 Caribbean can tolerate local and global stress factors. Therefore, we assessed coral reef condition Received in revised form 20 September 2019 indicators in reefs within and outside of MPAs in the southeastern Dominican Republic, considering Accepted 15 October 2019 benthic cover as well as the composition, diversity, recruitment, mortality, bleaching, the conservation Available online 18 October 2019 status and evolutionary distinctiveness of coral species. In general, we found that reef condition Keywords: indicators (coral and benthic cover, recruitment, bleaching, and mortality) within the MPAs showed Coral reefs better conditions than in the unprotected area (Boca Chica). Although the comparison between the Caribbean Boca Chica area and the MPAs may present some spatial imbalance, these zones were chosen for Biodiversity the purpose of making a comparison with a previous baseline presented. -
MARINE FAUNA and FLORA of BERMUDA a Systematic Guide to the Identification of Marine Organisms
MARINE FAUNA AND FLORA OF BERMUDA A Systematic Guide to the Identification of Marine Organisms Edited by WOLFGANG STERRER Bermuda Biological Station St. George's, Bermuda in cooperation with Christiane Schoepfer-Sterrer and 63 text contributors A Wiley-Interscience Publication JOHN WILEY & SONS New York Chichester Brisbane Toronto Singapore ANTHOZOA 159 sucker) on the exumbrella. Color vari many Actiniaria and Ceriantharia can able, mostly greenish gray-blue, the move if exposed to unfavorable condi greenish color due to zooxanthellae tions. Actiniaria can creep along on their embedded in the mesoglea. Polyp pedal discs at 8-10 cm/hr, pull themselves slender; strobilation of the monodisc by their tentacles, move by peristalsis type. Medusae are found, upside through loose sediment, float in currents, down and usually in large congrega and even swim by coordinated tentacular tions, on the muddy bottoms of in motion. shore bays and ponds. Both subclasses are represented in Ber W. STERRER muda. Because the orders are so diverse morphologically, they are often discussed separately. In some classifications the an Class Anthozoa (Corals, anemones) thozoan orders are grouped into 3 (not the 2 considered here) subclasses, splitting off CHARACTERISTICS: Exclusively polypoid, sol the Ceriantharia and Antipatharia into a itary or colonial eNIDARIA. Oral end ex separate subclass, the Ceriantipatharia. panded into oral disc which bears the mouth and Corallimorpharia are sometimes consid one or more rings of hollow tentacles. ered a suborder of Scleractinia. Approxi Stomodeum well developed, often with 1 or 2 mately 6,500 species of Anthozoa are siphonoglyphs. Gastrovascular cavity compart known. Of 93 species reported from Ber mentalized by radially arranged mesenteries. -
End-Permian Mass Extinction in the Oceans: an Ancient Analog for the Twenty-First Century?
EA40CH05-Payne ARI 23 March 2012 10:24 End-Permian Mass Extinction in the Oceans: An Ancient Analog for the Twenty-First Century? Jonathan L. Payne1 and Matthew E. Clapham2 1Department of Geological and Environmental Sciences, Stanford University, Stanford, California 94305; email: [email protected] 2Department of Earth and Planetary Sciences, University of California, Santa Cruz, California 95064; email: [email protected] Annu. Rev. Earth Planet. Sci. 2012. 40:89–111 Keywords First published online as a Review in Advance on ocean acidification, evolution, isotope geochemistry, volcanism, January 3, 2012 biodiversity The Annual Review of Earth and Planetary Sciences is online at earth.annualreviews.org Abstract This article’s doi: The greatest loss of biodiversity in the history of animal life occurred at the 10.1146/annurev-earth-042711-105329 end of the Permian Period (∼252 million years ago). This biotic catastro- Annu. Rev. Earth Planet. Sci. 2012.40:89-111. Downloaded from www.annualreviews.org Copyright c 2012 by Annual Reviews. phe coincided with an interval of widespread ocean anoxia and the eruption All rights reserved of one of Earth’s largest continental flood basalt provinces, the Siberian by Stanford University - Main Campus Robert Crown Law Library on 06/04/12. For personal use only. 0084-6597/12/0530-0089$20.00 Traps. Volatile release from basaltic magma and sedimentary strata dur- ing emplacement of the Siberian Traps can account for most end-Permian paleontological and geochemical observations. Climate change and, per- haps, destruction of the ozone layer can explain extinctions on land, whereas changes in ocean oxygen levels, CO2, pH, and temperature can account for extinction selectivity across marine animals. -
Supplementary Material
Supplementary Material SM1. Post-Processing of Images for Automated Classification Imagery was collected without artificial light and using a fisheye lens to maximise light capture, therefore each image needed to be processed prior annotation in order to balance colour and to minimise the non-linear distortion introduced by the fisheye lens (Figure S1). Initially, colour balance and lenses distortion correction were manually applied on the raw images using Photoshop (Adobe Systems, California, USA). However, in order to optimize the manual post-processing time of thousands of images, more recent images from the Indian Ocean and Pacific Ocean were post- processed using compressed images (jpeg format) and an automatic batch processing in Photoshop and ImageMagick, the latter an open-source software for image processing (www.imagemagick.org). In view of this, the performance of the automated image annotation on images without colour balance was contrasted against images colour balanced using manual post-processing (on raw images) and the automatic batch processing (on jpeg images). For this evaluation, the error metric described in the main text (Materials and Methods) was applied to the images from following regions: the Maldives and the Great Barrier Reef (Figures S2 and S3). We found that the colour balance applied regardless the type of processing (manual vs automatic) had an important beneficial effect on the performance of the automated image annotation as errors were reduced for critical labels in both regions (e.g., Algae labels; Figures S2 and S3). Importantly, no major differences in the performance of the automated annotations were observed between manual and automated adjustments for colour balance. -
Checklist of Fish and Invertebrates Listed in the CITES Appendices
JOINTS NATURE \=^ CONSERVATION COMMITTEE Checklist of fish and mvertebrates Usted in the CITES appendices JNCC REPORT (SSN0963-«OStl JOINT NATURE CONSERVATION COMMITTEE Report distribution Report Number: No. 238 Contract Number/JNCC project number: F7 1-12-332 Date received: 9 June 1995 Report tide: Checklist of fish and invertebrates listed in the CITES appendices Contract tide: Revised Checklists of CITES species database Contractor: World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 ODL Comments: A further fish and invertebrate edition in the Checklist series begun by NCC in 1979, revised and brought up to date with current CITES listings Restrictions: Distribution: JNCC report collection 2 copies Nature Conservancy Council for England, HQ, Library 1 copy Scottish Natural Heritage, HQ, Library 1 copy Countryside Council for Wales, HQ, Library 1 copy A T Smail, Copyright Libraries Agent, 100 Euston Road, London, NWl 2HQ 5 copies British Library, Legal Deposit Office, Boston Spa, Wetherby, West Yorkshire, LS23 7BQ 1 copy Chadwick-Healey Ltd, Cambridge Place, Cambridge, CB2 INR 1 copy BIOSIS UK, Garforth House, 54 Michlegate, York, YOl ILF 1 copy CITES Management and Scientific Authorities of EC Member States total 30 copies CITES Authorities, UK Dependencies total 13 copies CITES Secretariat 5 copies CITES Animals Committee chairman 1 copy European Commission DG Xl/D/2 1 copy World Conservation Monitoring Centre 20 copies TRAFFIC International 5 copies Animal Quarantine Station, Heathrow 1 copy Department of the Environment (GWD) 5 copies Foreign & Commonwealth Office (ESED) 1 copy HM Customs & Excise 3 copies M Bradley Taylor (ACPO) 1 copy ^\(\\ Joint Nature Conservation Committee Report No. -
Pseudosiderastrea Formosa Sp. Nov. (Cnidaria: Anthozoa: Scleractinia)
Zoological Studies 51(1): 93-98 (2012) Pseudosiderastrea formosa sp. nov. (Cnidaria: Anthozoa: Scleractinia) a New Coral Species Endemic to Taiwan Michel Pichon1, Yao-Yang Chuang2,3, and Chaolun Allen Chen2,3,4,* 1Museum of Tropical Queensland, 70-102 Flinders Street, Townsville 4810, Australia 2Biodiversity Research Center, Academia Sinica, Nangang, Taipei 115, Taiwan 3Institute of Oceanography, National Taiwan Univ., Taipei 106, Taiwan 4Institute of Life Science, National Taitung Univ., Taitung 904, Taiwan (Accepted September 1, 2011) Michel Pichon, Yao-Yang Chuang, and Chaolun Allen Chen (2012) Pseudosiderastrea formosa sp. nov. (Cnidaria: Anthozoa: Scleractinia) a new coral species endemic to Taiwan. Zoological Studies 51(1): 93-98. Pseudosiderastrea formosa sp. nov. is a new siderastreid scleractinian coral collected in several localities in Taiwan. It lives on rocky substrates where it forms encrusting colonies. Results of morphological observations and molecular genetic analyses are presented. The new species is described and compared to P. tayamai and Siderastrea savignyana, and its morphological and phylogenic affinities are discussed. http://zoolstud.sinica.edu.tw/Journals/51.1/93.pdf Key words: Pseudosiderastrea formosa sp. nov., New species, Scleractinia, Siderastreid, Western Pacific Ocean. A siderastreid scleractinian coral was Pseudosiderastrea, described as P. formosa sp. collected from several localities around Taiwan nov. and nearby islands, where it is relatively rare. The specimens present some morphological similarities with Pseudosiderastrea tayamai Yabe MATERIAL AND METHODS and Sugiyama, 1935, the only species hitherto known from that genus, and with Siderastrea Specimens were collected by scuba diving at savignyana Milne Edwards and Haime, 1849, Wanlitung (21°59'48"N, 120°42'10"E) and the outlet which is the sole representative in the Indian of the 3rd nuclear power plant (21°55'51.38"N, Ocean of the genus Siderastrea de Blainville, 120°44'46.82"E) on the southeastern coast 1830. -
Settlement of Larvae from Four Families of Corals in Response to a Crustose Coralline Alga and Its Biochemical Morphogens Taylor N
www.nature.com/scientificreports OPEN Settlement of larvae from four families of corals in response to a crustose coralline alga and its biochemical morphogens Taylor N. Whitman1,2, Andrew P. Negri 1, David G. Bourne 1,2 & Carly J. Randall 1* Healthy benthic substrates that induce coral larvae to settle are necessary for coral recovery. Yet, the biochemical cues required to induce coral settlement have not been identifed for many taxa. Here we tested the ability of the crustose coralline alga (CCA) Porolithon onkodes to induce attachment and metamorphosis, collectively termed settlement, of larvae from 15 ecologically important coral species from the families Acroporidae, Merulinidae, Poritidae, and Diploastreidae. Live CCA fragments, ethanol extracts, and hot aqueous extracts of P. onkodes induced settlement (> 10%) for 11, 7, and 6 coral species, respectively. Live CCA fragments were the most efective inducer, achieving over 50% settlement for nine species. The strongest settlement responses were observed in Acropora spp.; the only non-acroporid species that settled over 50% were Diploastrea heliopora, Goniastrea retiformis, and Dipsastraea pallida. Larval settlement was reduced in treatments with chemical extracts compared with live CCA, although high settlement (> 50%) was reported for six acroporid species in response to ethanol extracts of CCA. All experimental treatments failed (< 10%) to induce settlement in Montipora aequituberculata, Mycedium elephantotus, and Porites cylindrica. Individual species responded heterogeneously to all treatments, suggesting that none of the cues represent a universal settlement inducer. These results challenge the commonly-held notion that CCA ubiquitously induces coral settlement, and emphasize the critical need to assess additional cues to identify natural settlement inducers for a broad range of coral taxa. -
2.02 Rajasuriya 2008
ARJAN RAJASURIYA National Aquatic Resources Research and Development Agency, Crow Island, Colombo 15, Sri Lanka [email protected]; [email protected] fringing and patch reefs (Swan, 1983; Rajasuriya et al., 1995; Rajasuriya & White, 1995). Fringing coral reef Selected coral reefs were monitored in the northern, areas occur in a narrow band along the coast except in western and southern coastal waters of Sri Lanka to the southeast and northeast of the island where sand assess their current status and to understand the movement inhibits their formation. The shallow recovery processes after the 1998 coral bleaching event continental shelf of Gulf of Mannar contains extensive and the 2004 tsunami. The highest rate of recovery coral patch reefs from the Bar Reef to Mannar Island was observed at the Bar Reef Marine Sanctuary where (Rajasuriya, 1991; Rajasuriya, et al. 1998a; Rajasuriya rapid growth of Acropora cytherea and Pocillopora & Premaratne, 2000). In addition to these coral reefs, damicornis has contributed to reef recovery. which are limited to a depth of about 10m, there are Pocillopora damicornis has shown a high level of offshore coral patches in the west and east of the recruitment and growth on most reef habitats island at varying distances (15 -20 km) from the including reefs in the south. An increase in the growth coastline at an average depth of 20m (Rajasuriya, of the calcareous alga Halimeda and high levels of 2005). Sandstone and limestone reefs occur as sedimentation has negatively affected some fringing discontinuous bands parallel to the shore from inshore reefs especially in the south. Reef surveys carried out areas to the edge of the continental shelf (Swan, 1983; for the first time in the northern coastal waters around Rajasuriya et al., 1995). -
Description of a New Genus of Cryptochiridae (Decapoda: Brachyura) Associated with Siderastrea (Anthozoa: Scleractinia), with Notes on Feeding Habits
Scientia Marina 76(3) September 2012, 517-526, Barcelona (Spain) ISSN: 0214-8358 10.3989/scimar.03538.02E Description of a new genus of Cryptochiridae (Decapoda: Brachyura) associated with Siderastrea (Anthozoa: Scleractinia), with notes on feeding habits MARCELLE F.S. BADARO 1, ELIZABETH G. NEVES 1, PETER CASTRO 2 and RODRIGO JOHNSSON 1 1 Universidade Federal da Bahia, Instituto de Biologia, Departamento de Zoologia, LABIMAR (Crustacea, Cnidaria and Fauna Associada), Adhemar de Barros, s/n, Campus de Ondina, Bahia, 40170-290 Brasil. E-mail: [email protected] 2 Biological Sciences Department, California State Polytechnic University, Pomona, 91768 CA, U.S.A. SUMMARY: Members of the Cryptochiridae are small gall-crabs that live as obligate symbionts of scleractinian corals. Only two species have so far been recorded in the western Atlantic Ocean. Herein a new Cryptochiridae genus and species is described, and new information is added on the life history of cryptochirids. The new genus is characterized by having the carapace with the lowest deflection angle among the genera, and also shows the following features: thoracic sternite 4 with setules and constriction smaller than half of the width of the basis, anterior margin curved with apical row of granules; third maxilliped with subcircular exopod reaching medially the lateral margin of the ischium; pereiopod 2 with prominent distomesial and anterolateral expansion on the merus, propodus almost twice larger than dactylus; thoracic sternite 7 with complete medial suture, female pleopod 3 uniramous with longitudinal opening. Male first pleopod straight with subdistal curvature of approximately 90°. Individuals belonging to the new genus are found in galls in massive corals although this structure is cited as being characteristic of ramified corals. -
Taxonomy and Phylogenetic Relationships of the Coral Genera Australomussa and Parascolymia (Scleractinia, Lobophylliidae)
Contributions to Zoology, 83 (3) 195-215 (2014) Taxonomy and phylogenetic relationships of the coral genera Australomussa and Parascolymia (Scleractinia, Lobophylliidae) Roberto Arrigoni1, 7, Zoe T. Richards2, Chaolun Allen Chen3, 4, Andrew H. Baird5, Francesca Benzoni1, 6 1 Dept. of Biotechnology and Biosciences, University of Milano-Bicocca, 20126, Milan, Italy 2 Aquatic Zoology, Western Australian Museum, 49 Kew Street, Welshpool, WA 6106, Australia 3Biodiversity Research Centre, Academia Sinica, Nangang, Taipei 115, Taiwan 4 Institute of Oceanography, National Taiwan University, Taipei 106, Taiwan 5 ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811, Australia 6 Institut de Recherche pour le Développement, UMR227 Coreus2, 101 Promenade Roger Laroque, BP A5, 98848 Noumea Cedex, New Caledonia 7 E-mail: [email protected] Key words: COI, evolution, histone H3, Lobophyllia, Pacific Ocean, rDNA, Symphyllia, systematics, taxonomic revision Abstract Molecular phylogeny of P. rowleyensis and P. vitiensis . 209 Utility of the examined molecular markers ....................... 209 Novel micromorphological characters in combination with mo- Acknowledgements ...................................................................... 210 lecular studies have led to an extensive revision of the taxonomy References ...................................................................................... 210 and systematics of scleractinian corals. In the present work, we Appendix ....................................................................................... -
CORAL REEF DEGRADATION in the INDIAN OCEAN Status Report 2005
Coral Reef Degradation in the Indian Ocean Status Report 2005 Coral Reef Degradation in the Indian Ocean. The coastal ecosystem of the Indian Ocean includes environments such as mangroves, sea- Program Coordination grass beds and coral reefs. These habitats are some CORDIO Secretariat Coral Reef Degradation of the most productive and diverse environments Olof Lindén on the planet. They form an essential link in the David Souter Department of Biology and Environmental food webs that leads to fish and other seafood in the Indian Ocean Science providing food security to the local human University of Kalmar population. In addition coral reefs and mangrove 29 82 Kalmar, Sweden Status Report 2005 forests protect the coastal areas against erosion. (e-mail: [email protected], Unfortunately, due to a number of human activi- [email protected]) Editors: DAVID SOUTER & OLOF LINDÉN ties, these valuable environments are now being degraded at an alarming rate. The use of destruc- CORDIO East Africa Coordination Center David Obura tive fishing techniques on reefs, coral mining and P.O. Box 035 pollution are examples of some of these stresses Bamburi, Mombasa, Kenya from local sources on the coral reefs. Climate (e-mail: [email protected], change is another stress factor which is causing [email protected]) additional destruction of the reefs. CORDIO is a collaborative research and CORDIO South Asia Coordination Center development program involving expert groups in Dan Wilhelmsson (to 2004) Status Report 2005 countries of the Indian Ocean. The focus of Jerker Tamelander (from 2005) IUCN (World Conservation Union) CORDIO is to mitigate the widespread degrada- 53 Horton Place, Colombo 7, Sri Lanka tion of the coral reefs and other coastal eco- (e-mail: [email protected]) systems by supporting research, providing knowledge, creating awareness, and assist in CORDIO Indian Ocean Islands developing alternative livelihoods.