A Review of Reported Seaweed Diseases and Pests in Aquaculture in Asia
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RED ALGAE · RHODOPHYTA Rhodophyta Are Cosmopolitan, Found from the Artic to the Tropics
RED ALGAE · RHODOPHYTA Rhodophyta are cosmopolitan, found from the artic to the tropics. Although they grow in both marine and fresh water, 98% of the 6,500 species of red algae are marine. Most of these species occur in the tropics and sub-tropics, though the greatest number of species is temperate. Along the California coast, the species of red algae far outnumber the species of green and brown algae. In temperate regions such as California, red algae are common in the intertidal zone. In the tropics, however, they are mostly subtidal, growing as epiphytes on seagrasses, within the crevices of rock and coral reefs, or occasionally on dead coral or sand. In some tropical waters, red algae can be found as deep as 200 meters. Because of their unique accessory pigments (phycobiliproteins), the red algae are able to harvest the blue light that reaches deeper waters. Red algae are important economically in many parts of the world. For example, in Japan, the cultivation of Pyropia is a multibillion-dollar industry, used for nori and other algal products. Rhodophyta also provide valuable “gums” or colloidal agents for industrial and food applications. Two extremely important phycocolloids are agar (and the derivative agarose) and carrageenan. The Rhodophyta are the only algae which have “pit plugs” between cells in multicellular thalli. Though their true function is debated, pit plugs are thought to provide stability to the thallus. Also, the red algae are unique in that they have no flagellated stages, which enhance reproduction in other algae. Instead, red algae has a complex life cycle, with three distinct stages. -
Characterization and Expression Profiles of Small Heat Shock Proteins in the Marine Red Alga Pyropia Yezoensis
Title Characterization and expression profiles of small heat shock proteins in the marine red alga Pyropia yezoensis Author(s) Uji, Toshiki; Gondaira, Yohei; Fukuda, Satoru; Mizuta, Hiroyuki; Saga, Naotsune Cell Stress and Chaperones, 24(1), 223-233 Citation https://doi.org/10.1007/s12192-018-00959-9 Issue Date 2019-01 Doc URL http://hdl.handle.net/2115/76496 This is a post-peer-review, pre-copyedit version of an article published in Cell Stress and Chaperones. The final Rights authenticated version is available online at: http://dx.doi.org/10.1007/s12192-018-00959-9 Type article (author version) File Information manuscript-revised2018.12.13.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP Characterization and expression profiles of small heat shock proteins in the marine red alga Pyropia yezoensis Toshiki Uji1·Yohei Gondaira1·Satoru Fukuda2·Hiroyuki Mizuta1·Naotsune Saga2 1 Division of Marine Life Science, Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan 2 Section of Food Sciences, Institute for Regional Innovation, Hirosaki University, Aomori, Aomori 038-0012, Japan Corresponding author: Toshiki Uji Faculty of Fisheries Sciences, Hokkaido University, Hakodate 041-8611, Japan Tel/Fax: +81-138-40-8864 E-mail: [email protected] Running title: Transcriptional profiling of small heat shock proteins in Pyropia 1 Abstract Small heat shock proteins (sHSPs) are found in all three domains of life (Bacteria, Archaea, and Eukarya) and play a critical role in protecting organisms from a range of environmental stresses. However, little is known about their physiological functions in red algae. -
Enhancement of Xanthophyll Synthesis in Porphyra/Pyropia Species (Rhodophyta, Bangiales) by Controlled Abiotic Factors: a Systematic Review and Meta-Analysis
marine drugs Review Enhancement of Xanthophyll Synthesis in Porphyra/Pyropia Species (Rhodophyta, Bangiales) by Controlled Abiotic Factors: A Systematic Review and Meta-Analysis Florentina Piña 1,2,3,4 and Loretto Contreras-Porcia 1,2,3,4,* 1 Departamento de Ecología y Biodiversidad, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago 8370251, Chile; fl[email protected] 2 Centro de Investigación Marina Quintay (CIMARQ), Facultad de Ciencias de la Vida, Universidad Andres Bello, Quintay 2531015, Chile 3 Center of Applied Ecology and Sustainability (CAPES), Santiago 8331150, Chile 4 Instituto Milenio en Socio-Ecología Costera (SECOS), Santiago 8370251, Chile * Correspondence: [email protected] Abstract: Red alga species belonging to the Porphyra and Pyropia genera (commonly known as Nori), which are widely consumed and commercialized due to their high nutritional value. These species have a carotenoid profile dominated by xanthophylls, mostly lutein and zeaxanthin, which have relevant benefits for human health. The effects of different abiotic factors on xanthophyll synthesis in these species have been scarcely studied, despite their health benefits. The objectives of this study were (i) to identify the abiotic factors that enhance the synthesis of xanthophylls in Porphyra/Pyropia species by conducting a systematic review and meta-analysis of the xanthophyll content found in the literature, and (ii) to recommend a culture method that would allow a significant accumulation of Citation: Piña, F.; Contreras-Porcia, these compounds in the biomass of these species. The results show that salinity significantly affected L. Enhancement of Xanthophyll the content of total carotenoids and led to higher values under hypersaline conditions (70,247.91 µg/g Synthesis in Porphyra/Pyropia Species dm at 55 psu). -
Seaweed Aquaculture in Washington State
Seaweed Aquaculture in Washington State Thomas Mumford Marine Agronomics, LLC Olympia, Washington [email protected] Outline of Presentation • What are seaweeds? • Seaweeds of Washington • Approaches to Seaweed Aquaculture • Uses/products • Overview of how to grow seaweeds • Where are we going in the future? • Resources WhatWhat are “seaweeds?Algae”? •Seaweed (a kind of alga) •Kelp (a kind of seaweed) Algae Seaweeds Kelp Rhodophyta, Phaeophyta, Chlorophyta •Red Seaweeds (Rhodophyta) •Pyropia, Chondrus, Mazzaella •Brown Seaweeds (Phaeophyta) •Kelp •Sargassum •Green Seaweeds (Chlorophyta) •Ulva Supergroups containing “Algae” Graham 2016, Fig 5.1 The Bounty of Washington • Over 600 species of seaweeds • One of the most diverse kelp floras in the world- 22 species Seaweed Uses =Ecosystem Functions -Primary Producers • Food Detritus Dissolved organic materials -Structuring Elements (biogenic habitats) • Kelp beds -Biodiversity Function • Seaweed species themselves • Other species in, on and around seaweeds Traditional Coast Salish Uses Food, tools, culture Fishing Line made from Nereocystis stipes 11/21/19 Herring-roe-on-kelp (Macrocystis) Slide 8 • Food - nori, kombu, wakame, others • Fodder – feed supplements, forage Economic • Fiber – alginate fiber, kelp baskets Seaweed Uses • Fertilizer and Soil Conditioners– seaweed meal (kelp, rockweeds) • Drugs – iodine, kainic and domoic acids • Chemicals – “kelp”, potash, iodine, acetone • Biochemicals – alginate, carrageenan, agar, agarose • Cosmetics – alginate, carrageenan • Biomass – for -
Pyropia Orbicularis Sp. Nov. (Rhodophyta, Bangiaceae) Based
Pyropia orbicularis sp. nov. (Rhodophyta, Bangiaceae) based on a population previously known as Porphyra columbina from the central coast of Chile Maria-Eliana Ramirez, Loretto Contreras-Porcia, Marie-Laure Guillemin, Juliet Brodie, Catalina Valdivia, María Rosa Flores-Molina, Alejandra Núñez, Cristian Bulboa Contador, Carlos Lovazzano To cite this version: Maria-Eliana Ramirez, Loretto Contreras-Porcia, Marie-Laure Guillemin, Juliet Brodie, Catalina Val- divia, et al.. Pyropia orbicularis sp. nov. (Rhodophyta, Bangiaceae) based on a population previously known as Porphyra columbina from the central coast of Chile. Phytotaxa, Magnolia Press 2014, 158 (2), pp.133-153. hal-01138605 HAL Id: hal-01138605 https://hal.archives-ouvertes.fr/hal-01138605 Submitted on 17 Apr 2015 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Pyropia orbicularis sp. nov. (Rhodophyta, Bangiaceae) based on a 2 population previously known as Porphyra columbina from the central 3 coast of Chile 4 MARÍA ELIANA RAMÍREZ1, LORETTO CONTRERAS-PORCIA2,*, MARIE-LAURE 5 GUILLEMIN3,*, -
SPECIAL PUBLICATION 6 the Effects of Marine Debris Caused by the Great Japan Tsunami of 2011
PICES SPECIAL PUBLICATION 6 The Effects of Marine Debris Caused by the Great Japan Tsunami of 2011 Editors: Cathryn Clarke Murray, Thomas W. Therriault, Hideaki Maki, and Nancy Wallace Authors: Stephen Ambagis, Rebecca Barnard, Alexander Bychkov, Deborah A. Carlton, James T. Carlton, Miguel Castrence, Andrew Chang, John W. Chapman, Anne Chung, Kristine Davidson, Ruth DiMaria, Jonathan B. Geller, Reva Gillman, Jan Hafner, Gayle I. Hansen, Takeaki Hanyuda, Stacey Havard, Hirofumi Hinata, Vanessa Hodes, Atsuhiko Isobe, Shin’ichiro Kako, Masafumi Kamachi, Tomoya Kataoka, Hisatsugu Kato, Hiroshi Kawai, Erica Keppel, Kristen Larson, Lauran Liggan, Sandra Lindstrom, Sherry Lippiatt, Katrina Lohan, Amy MacFadyen, Hideaki Maki, Michelle Marraffini, Nikolai Maximenko, Megan I. McCuller, Amber Meadows, Jessica A. Miller, Kirsten Moy, Cathryn Clarke Murray, Brian Neilson, Jocelyn C. Nelson, Katherine Newcomer, Michio Otani, Gregory M. Ruiz, Danielle Scriven, Brian P. Steves, Thomas W. Therriault, Brianna Tracy, Nancy C. Treneman, Nancy Wallace, and Taichi Yonezawa. Technical Editor: Rosalie Rutka Please cite this publication as: The views expressed in this volume are those of the participating scientists. Contributions were edited for Clarke Murray, C., Therriault, T.W., Maki, H., and Wallace, N. brevity, relevance, language, and style and any errors that [Eds.] 2019. The Effects of Marine Debris Caused by the were introduced were done so inadvertently. Great Japan Tsunami of 2011, PICES Special Publication 6, 278 pp. Published by: Project Designer: North Pacific Marine Science Organization (PICES) Lori Waters, Waters Biomedical Communications c/o Institute of Ocean Sciences Victoria, BC, Canada P.O. Box 6000, Sidney, BC, Canada V8L 4B2 Feedback: www.pices.int Comments on this volume are welcome and can be sent This publication is based on a report submitted to the via email to: [email protected] Ministry of the Environment, Government of Japan, in June 2017. -
Article PHYTOTAXA Copyright © 2012 Magnolia Press ISSN 1179-3163 (Online Edition)
Phytotaxa 54: 1–12 (2012) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Article PHYTOTAXA Copyright © 2012 Magnolia Press ISSN 1179-3163 (online edition) A new species of Pyropia (Rhodophyta, Bangiaceae), from the Pacific coast of Mexico, based on morphological and molecular evidence LUZ ELENA MATEO-CID1*, ANGELA CATALINA MENDOZA-GONZÁLEZ1, JHOANA DÍAZ- LARREA2, ABEL SENTÍES2, FRANCISCO F. PEDROCHE3 & JUAN DIEGO SÁNCHEZ HEREDIA4 1 Departamento de Botánica, Escuela Nacional de Ciencias Biológicas, IPN. Carpio y Plan de Ayala s/n. Mexico, D.F. 11340. 2 Departamento de Hidrobiología. Universidad Autónoma Metropolitana-Iztapalapa. A.P. 55-535, Mexico, D.F. 09340, Mexico. 3 Departamento de Ciencias Ambientales. Universidad Autónoma Metropolitana-Lerma, Mexico. 4 Facultad de Biología. Universidad Michoacana de San Nicolás de Hidalgo, Morelia, Michoacán, Mexico. * Corresponding author: E-mail: [email protected] Abstract Pyropia raulaguilarii sp. nov. is described from Michoacán, tropical Mexican Pacific, on basis of comparative morphology and nrSSU, rbcL sequence analysis. It is distinguished from other Pyropia species by the foliose and lanceolate gametophyte, a monoecious thallus and the zygotosporangia in packets of 2x2x4. The phylogenetic analysis showed that the two Pacific Mexican samples, from Caletilla and Carrizalillo (Michoacán), were almost identical and formed a distinctive and well supported clade segregated from other species of Pyropia from Brazil, USA and Mexico. The Mexican entity is morphologically and genetically distinct from other Pyropia species, suggesting that this species should be assigned to a new taxon. Key words: Bangiales, molecular phylogeny, nrSSU, rbcL, marine red algae. Introduction Species of Porphyra C.Agardh have few characters for distinguishing species, however, these characters alone have proved to be misleading based on the discovery, using molecular sequences, of many cryptic taxa among species with very similar morphologies (e.g. -
Population Genetics and Desiccation Stress of Porphyra Umbilicalis Kützing in the Gulf of Maine
University of New Hampshire University of New Hampshire Scholars' Repository Doctoral Dissertations Student Scholarship Winter 2018 POPULATION GENETICS AND DESICCATION STRESS OF PORPHYRA UMBILICALIS KÜTZING IN THE GULF OF MAINE Yuanyu Cao University of New Hampshire, Durham Follow this and additional works at: https://scholars.unh.edu/dissertation Recommended Citation Cao, Yuanyu, "POPULATION GENETICS AND DESICCATION STRESS OF PORPHYRA UMBILICALIS KÜTZING IN THE GULF OF MAINE" (2018). Doctoral Dissertations. 2429. https://scholars.unh.edu/dissertation/2429 This Dissertation is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. POPULATION GENETICS AND DESICCATION STRESS OF PORPHYRA UMBILICALIS KÜTZING IN THE GULF OF MAINE BY YUANYU CAO B.A., Jimei University, Xiamen, Fujian, Peoples Republic of China, 2008 M. S., Jimei University, Xiamen, Fujian, Peoples Republic of China, 2013 DISSERTATION Submitted to the University of New Hampshire in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Genetics December 2018 This dissertation has been examined and approved in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Genetics by: Dissertation Dir. Anita S. Klein, Assoc. Professor of Biological Sciences Estelle M. Hrabak, Assoc. Professor of Molecular, Cellular, & Biomedical Sci. Matthew D. MacManes, Asst. Professor of Molecular, Cellular, & Biomedical Sci. Arthur Mathieson, Professor of Plant Biology W. Kelley Thomas, Professor of Molecular, Cellular, & Biomedical Sci. On September 13, 2018 ii DEDICATION To my husband, Mengmeng. -
Marine Species Distributions: from Data to Predictive Models
Marine Species Distributions: From data to predictive models Samuel Bosch Promoter: Prof. Dr. Olivier De Clerck Thesis submitted in partial fulfilment of the requirements for the degree of Doctor (PhD) in Science – Biology Academic year 2016-2017 Members of the examination committee Prof. Dr. Olivier De Clerck - Ghent University (Promoter)* Prof. Dr. Tom Moens – Ghent University (Chairman) Prof. Dr. Elie Verleyen – Ghent University (Secretary) Prof. Dr. Frederik Leliaert – Botanic Garden Meise / Ghent University Dr. Tom Webb – University of Sheffield Dr. Lennert Tyberghein - Vlaams Instituut voor de Zee * non-voting members Financial support This thesis was funded by the ERANET INVASIVES project (EU FP7 SEAS-ERA/INVASIVES SD/ER/010) and by VLIZ as part of the Flemish contribution to the LifeWatch ESFRI. Table of contents Chapter 1 General Introduction 7 Chapter 2 Fishing for data and sorting the catch: assessing the 25 data quality, completeness and fitness for use of data in marine biogeographic databases Chapter 3 sdmpredictors: an R package for species distribution 49 modelling predictor datasets Chapter 4 In search of relevant predictors for marine species 61 distribution modelling using the MarineSPEED benchmark dataset Chapter 5 Spatio-temporal patterns of introduced seaweeds in 97 European waters, a critical review Chapter 6 A risk assessment of aquarium trade introductions of 119 seaweed in European waters Chapter 7 Modelling the past, present and future distribution of 147 invasive seaweeds in Europe Chapter 8 General discussion 179 References 193 Summary 225 Samenvatting 229 Acknowledgements 233 Chapter 1 General Introduction 8 | C h a p t e r 1 Species distribution modelling Throughout most of human history knowledge of species diversity and their respective distributions was an essential skill for survival and civilization. -
Genetic and Morphological Differentiation of Porphyra And
Genetic and morphological differentiation of Porphyra and Pyropia species (Bangiales, Rhodophyta) coexisting in a rocky intertidal in Central Chile Andrés Meynard, Javier Zapata, Nicolás Salas, Claudia Betancourtt, Gabriel Pérez-lara, Francisco Castañeda, María Eliana Ramírez, Cristian Bulboa Contador, Marie-laure Guillemin, Loretto Contreras-porcia To cite this version: Andrés Meynard, Javier Zapata, Nicolás Salas, Claudia Betancourtt, Gabriel Pérez-lara, et al.. Ge- netic and morphological differentiation of Porphyra and Pyropia species (Bangiales, Rhodophyta) coexisting in a rocky intertidal in Central Chile. Journal of Phycology, Wiley, 2019, 55 (2), pp.297- 313. 10.1111/jpy.12829. hal-02147670 HAL Id: hal-02147670 https://hal.sorbonne-universite.fr/hal-02147670 Submitted on 4 Jun 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Journal of Phycology Genetic and morphological differentiation of Porphyra and Pyropia species (Bangiales, Rhodophyta) coexisting in a rocky intertidal in Central Chile Journal: Journal of Phycology Manuscript ID -
Rhodophyta, Bangiaceae) Based on a Population Previously Known As Porphyra Columbina from the Central Coast of Chile
Phytotaxa 158 (2): 133–153 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Article PHYTOTAXA Copyright © 2014 Magnolia Press ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.158.2.2 Pyropia orbicularis sp. nov. (Rhodophyta, Bangiaceae) based on a population previously known as Porphyra columbina from the central coast of Chile MARÍA ELIANA RAMÍREZ1, LORETTO CONTRERAS-PORCIA2,*, MARIE-LAURE GUILLEMIN3, JULIET BRODIE4, CATALINA VALDIVIA2, MARÍA ROSA FLORES-MOLINA5, ALEJANDRA NÚÑEZ2, CRISTIAN BULBOA CONTADOR6 & CARLOS LOVAZZANO2 1Museo Nacional de Historia Natural, Área Botánica, Casilla 787, Santiago, Chile 2Departamento de Ecología y Biodiversidad, Facultad de Ecología y Recursos Naturales, Universidad Andres Bello, República 470, Santiago, Chile 3Instituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Casilla 567 Valdivia, Chile 4Natural History Museum, Department of Life Sciences, Cromwell Road, London SW7 5BD, UK 5Instituto de Ciencias Marinas y Limnológicas, Facultad de Ciencias, Universidad Austral de Chile, Casilla 567, Valdivia, Chile 6Ingeniería en Acuicultura, Facultad de Ecología y Recursos Naturales, Universidad Andres Bello, República 470, 8370251 Santiago, Chile * Corresponding author: Loretto Contreras-Porcia. [email protected] Abstract A new species of bladed Bangiales, Pyropia orbicularis sp. nov., has been described for the first time from the central coast of Chile based on morphology and molecular analyses. The new species was incorrectly known previously as Porphyra columbina (now Pyropia columbina), and it can be distinguished from other species of Pyropia through a range of morphological characteristics, including the shape, texture and colour of the thallus, and the arrangement of the reproductive structures on the foliose thalli. Molecular phylogenies based on both the mitochondrial COI and plastid rbcL gene regions enable this species to be distinguished from other species within Pyropia. -
Diploid Apogamy in Red Algal Species of the Genus Pyropia
NorCal Open Access Publications Journal of Aquatic Research and Marine Sciences NORCAL Volume 2019; Issue 3 OPEN ACCESS PUBLICATION Mikami K Opinion Article Diploid Apogamy in Red Algal Species of the Genus Pyropia Koji Mikami* Faculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho, Hakodate 041-08611, Japan *Corresponding author: Koji Mikami, Faculty of Fisheries Sciences, Hokkaido University, 3-1-1 Minato-cho, Hakodate 041-8611, Japan, Tel/Fax: +81-138-40-8899; E-mail: [email protected] Received Date: 24 July, 2019; Accepted Date: 31 July, 2019; Published Date: 05 August, 2019 Bangiales is an order of red algae in the class for reproduction from somatic cells without ploidy change Bangiophyceae of the division Rhodophyta [1,2] that has [8,23], a phenomenon that has been observed primarily in ferns and vascular plants [22,24-26]. Bangia, Pyropia, Porphyra, and Boreophyllum [3]. Most In seaweeds, production of sporophytes from somatic recentlyseaweeds beenin the subdividedBangiales feature into fifteena heteromorphic genera including haploid- cells has been observed in thalli of P. yezoensis treated diploid life cycle wherein both the haploid gametophyte and with hydrogen peroxide [10] and laboratory-cultured the diploid sporophyte develop multicellular bodies that female gametophytes of P. haitanensis [27]. Although appear in temporally distinct periods of the year [4-6]. In these phenomena were initially described as apogamy most plants and seaweeds, transitions from gametophyte to sporophyte and from sporophyte to gametophyte are misnomers. In the case of P. yezoensis, although the triggered by fertilization of male and female gametes or parthenogenesis [10,27], these definitions may be and meiosis, respectively [4-8].