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Checklist of the Mammals of Indonesia
CHECKLIST OF THE MAMMALS OF INDONESIA Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation i ii CHECKLIST OF THE MAMMALS OF INDONESIA Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation By Ibnu Maryanto Maharadatunkamsi Anang Setiawan Achmadi Sigit Wiantoro Eko Sulistyadi Masaaki Yoneda Agustinus Suyanto Jito Sugardjito RESEARCH CENTER FOR BIOLOGY INDONESIAN INSTITUTE OF SCIENCES (LIPI) iii © 2019 RESEARCH CENTER FOR BIOLOGY, INDONESIAN INSTITUTE OF SCIENCES (LIPI) Cataloging in Publication Data. CHECKLIST OF THE MAMMALS OF INDONESIA: Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation/ Ibnu Maryanto, Maharadatunkamsi, Anang Setiawan Achmadi, Sigit Wiantoro, Eko Sulistyadi, Masaaki Yoneda, Agustinus Suyanto, & Jito Sugardjito. ix+ 66 pp; 21 x 29,7 cm ISBN: 978-979-579-108-9 1. Checklist of mammals 2. Indonesia Cover Desain : Eko Harsono Photo : I. Maryanto Third Edition : December 2019 Published by: RESEARCH CENTER FOR BIOLOGY, INDONESIAN INSTITUTE OF SCIENCES (LIPI). Jl Raya Jakarta-Bogor, Km 46, Cibinong, Bogor, Jawa Barat 16911 Telp: 021-87907604/87907636; Fax: 021-87907612 Email: [email protected] . iv PREFACE TO THIRD EDITION This book is a third edition of checklist of the Mammals of Indonesia. The new edition provides remarkable information in several ways compare to the first and second editions, the remarks column contain the abbreviation of the specific island distributions, synonym and specific location. Thus, in this edition we are also corrected the distribution of some species including some new additional species in accordance with the discovery of new species in Indonesia. -
Quaternary Murid Rodents of Timor Part I: New Material of Coryphomys Buehleri Schaub, 1937, and Description of a Second Species of the Genus
QUATERNARY MURID RODENTS OF TIMOR PART I: NEW MATERIAL OF CORYPHOMYS BUEHLERI SCHAUB, 1937, AND DESCRIPTION OF A SECOND SPECIES OF THE GENUS K. P. APLIN Australian National Wildlife Collection, CSIRO Division of Sustainable Ecosystems, Canberra and Division of Vertebrate Zoology (Mammalogy) American Museum of Natural History ([email protected]) K. M. HELGEN Department of Vertebrate Zoology National Museum of Natural History Smithsonian Institution, Washington and Division of Vertebrate Zoology (Mammalogy) American Museum of Natural History ([email protected]) BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY Number 341, 80 pp., 21 figures, 4 tables Issued July 21, 2010 Copyright E American Museum of Natural History 2010 ISSN 0003-0090 CONTENTS Abstract.......................................................... 3 Introduction . ...................................................... 3 The environmental context ........................................... 5 Materialsandmethods.............................................. 7 Systematics....................................................... 11 Coryphomys Schaub, 1937 ........................................... 11 Coryphomys buehleri Schaub, 1937 . ................................... 12 Extended description of Coryphomys buehleri............................ 12 Coryphomys musseri, sp.nov.......................................... 25 Description.................................................... 26 Coryphomys, sp.indet.............................................. 34 Discussion . .................................................... -
Diversification of Muroid Rodents Driven by the Late Miocene Global Cooling Nelish Pradhan University of Vermont
University of Vermont ScholarWorks @ UVM Graduate College Dissertations and Theses Dissertations and Theses 2018 Diversification Of Muroid Rodents Driven By The Late Miocene Global Cooling Nelish Pradhan University of Vermont Follow this and additional works at: https://scholarworks.uvm.edu/graddis Part of the Biochemistry, Biophysics, and Structural Biology Commons, Evolution Commons, and the Zoology Commons Recommended Citation Pradhan, Nelish, "Diversification Of Muroid Rodents Driven By The Late Miocene Global Cooling" (2018). Graduate College Dissertations and Theses. 907. https://scholarworks.uvm.edu/graddis/907 This Dissertation is brought to you for free and open access by the Dissertations and Theses at ScholarWorks @ UVM. It has been accepted for inclusion in Graduate College Dissertations and Theses by an authorized administrator of ScholarWorks @ UVM. For more information, please contact [email protected]. DIVERSIFICATION OF MUROID RODENTS DRIVEN BY THE LATE MIOCENE GLOBAL COOLING A Dissertation Presented by Nelish Pradhan to The Faculty of the Graduate College of The University of Vermont In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Specializing in Biology May, 2018 Defense Date: January 8, 2018 Dissertation Examination Committee: C. William Kilpatrick, Ph.D., Advisor David S. Barrington, Ph.D., Chairperson Ingi Agnarsson, Ph.D. Lori Stevens, Ph.D. Sara I. Helms Cahan, Ph.D. Cynthia J. Forehand, Ph.D., Dean of the Graduate College ABSTRACT Late Miocene, 8 to 6 million years ago (Ma), climatic changes brought about dramatic floral and faunal changes. Cooler and drier climates that prevailed in the Late Miocene led to expansion of grasslands and retreat of forests at a global scale. -
Isolation by Marine Barriers and Climate Explain Areas of Endemism in an Island Rodent
Received: 9 January 2018 | Revised: 9 April 2018 | Accepted: 6 May 2018 DOI: 10.1111/jbi.13392 RESEARCH PAPER Isolation by marine barriers and climate explain areas of endemism in an island rodent Thomas C. Giarla1 | Sean P. Maher2 | Anang S. Achmadi3 | Meagan K. Moore4 | Mark T. Swanson4,5 | Kevin C. Rowe6,7 | Jacob A. Esselstyn4,5 1Department of Biology, Siena College, Loudonville, New York Abstract 2Department of Biology, Missouri State Aim: The Indonesian island of Sulawesi is home to thousands of endemic terrestrial University, Springfield, Missouri animal species. Phylogeographical studies of some of these taxa revealed concordant 3Museum Zoologicum Bogoriense, Research Center for Biology, Cibinong, Indonesia distribution patterns (areas of endemism; AoEs), suggestive of a shared evolutionary 4Museum of Natural Science, Louisiana or ecological mechanism driving divergence among various terrestrial taxa. Generally, State University, Baton Rouge, Louisiana AoEs have been attributed to Pleistocene marine incursions, geological fault zones 5 Department of Biological Sciences, ’ Louisiana State University, Baton Rouge, and Sulawesi s history as an archipelago. We test, for the first time, the hypothesis Louisiana that population divergences are associated with unsuitable climate spaces at the 6 Sciences Department, Museums Victoria, boundaries between these areas. Melbourne, VIC, Australia Location: Sulawesi, Indonesia. 7BioSciences, University of Melbourne, Melbourne, VIC, Australia Taxon: Maxomys musschenbroekii, a common murid rodent endemic to Sulawesi. Methods: We sequenced a mitochondrial gene, four nuclear protein-coding genes Correspondence Thomas C. Giarla, Siena College, 515 Loudon and hundreds of ultraconserved elements from individuals sampled across the island, Rd, Loudonville, NY 12211. which we used to build intraspecific phylogenies and identify population structure. -
View Preprint
A peer-reviewed version of this preprint was published in PeerJ on 8 October 2019. View the peer-reviewed version (peerj.com/articles/7858), which is the preferred citable publication unless you specifically need to cite this preprint. Camacho-Sanchez M, Hawkins MTR, Tuh Yit Yu F, Maldonado JE, Leonard JA. 2019. Endemism and diversity of small mammals along two neighboring Bornean mountains. PeerJ 7:e7858 https://doi.org/10.7717/peerj.7858 Small mammal diversity along two neighboring Bornean mountains Melissa T. R. Hawkins Corresp., 1, 2, 3 , Miguel Camacho-Sanchez 4 , Fred Tuh Yit Yuh 5 , Jesus E Maldonado 1 , Jennifer A Leonard 4 1 Center for Conservation Genomics, Smithsonian Conservation Biology Institute, National Zoological Park, Washington DC, United States 2 Department of Biological Sciences, Humboldt State University, Arcata, California, United States 3 Division of Mammals, National Museum of Natural History, Washington DC, United States 4 Conservation and Evolutionary Genetics Group, Doñana Biological Station (EBD-CSIC), Sevilla, Spain 5 Sabah Parks, Kota Kinabalu, Sabah, Malaysia Corresponding Author: Melissa T. R. Hawkins Email address: [email protected] Biodiversity across elevational gradients generally follows patterns, the evolutionary origins of which are debated. We trapped small non-volant mammals across an elevational gradient on Mount (Mt.) Kinabalu (4,101 m) and Mt. Tambuyukon (2,579 m), two neighboring mountains in Borneo, Malaysia. We also included visual records and camera trap data from Mt. Tambuyukon. On Mt. Tambuyukon we trapped a total of 299 individuals from 23 species in 6,187 trap nights (4.8% success rate). For Mt. Kinabalu we trapped a total 213 animals from 19 species, in 2,044 trap nights, a 10.4% success rate. -
Rodents of Ndola (Copperbelt Province, Zambia)
Rodents of Ndola (Copperbelt Province, Zambia) Inaugural-Dissertation zur Erlangung des Doktorgrades Dr. rer. nat. des Fachbereichs Bio- und Geografie, an der Universität - Duisburg-Essen vorgelegt von Mathias Kawalika, MSc. aus Chipata (Sambia) Juli 2004 2 Die der vorliegenden Arbeit zugrundeliegenden Untersuchungen wurden unter direkter Betreuung von Herrn Prof. Dr. Hynek Burda, FB Bio- und Geowissenschaften, Land- schaftsarchitektur der Universität Duisburg-Essen, im Freiland und in Laboratory Sec- tion von Ndola City Council sowie im Labor Kafubu Water and Sewerage Co. Ltd. in Ndola (Sambia) durchgeführt. 1. Gutachter: Prof. Dr. Hynek Burda (Univ. Duisburg-Essen) 2. Gutachter: Prof. Dr. Herwig Leirs (Univ. Antwerpen) 3. Gutachter: prof. Dr. Friedemann Schrenk (Univ. Frankfurt am Main) Vorsitzender des Prüfungsausschusses: Prof. Dr. Guido Benno Feige (Univ. Duisburg-Essen) Tag der mündlichen Prüfung: 23. November 2004 3 I dedicate this thesis to my spiritual guide and mentor Sant Thakar Singh, my lovely wife Doyen, the children Enid, Clara, Jean, Henry, Margaret, Mirriam and Luwin and also my father Mr. Henry Chimpumba Kawalika. They all felt I deserved this one. 4 Abstract The present thesis deals with rodents of Ndola, capital of the Copperbelt Prov- ince, Zambia, and its surroundings. The study area is located approximately 13 o South and 28 o 35 East, about 1,300 m above sea level, is characterised by average monthly rainfall of 1,198 mm (with a highly variable rain: monthly range 0-283 mm, with 5 to 7 virtually rainless months per year). The region exhibits a mosaic of built up areas, culti- vated fields, forests and natural habitats of the original Zambezian savannah woodland. -
A Case Study on the Genetic Diversity of Small Mammal Communities in the Lower Kinabatangan Floodplain on Borneo, Sabah, Malaysia
UNIVERSITY OF VETERINARY MEDICINE HANNOVER Institute of Zoology Effects of habitat fragmentation in a tropical rain forest ecosystem: a case study on the genetic diversity of small mammal communities in the Lower Kinabatangan floodplain on Borneo, Sabah, Malaysia THESIS Submitted in partial fulfilment of the requirements of the degree of Doctor of Natural Sciences Doctor rerum naturalium (Dr. rer. nat.) by Jennifer Brunke Gronau/Leine Hannover, Germany 2020 Scientific Supervision: Prof. Dr. Ute Radespiel, University of Veterinary Medicine Hannover, Germany 1st Evaluation: Prof. Dr. Ute Radespiel Institute of Zoology University of Veterinary Medicine Hannover, Germany 2nd Evaluation: PD Dr. Christian Roos Primate Genetics Laboratory German Primate Centre Göttingen, Germany Day of oral exam: 02.11.2020 Sponsorship: German Academic Exchange Service (DAAD) Calenberg Grubenhagensche Landschaft Table of contents Table of contents i Previously published excerpts of this thesis iii Summary iv Zusammenfassung vii Chapter 1 General introduction 1 1.1 Southeast Asia, a leading hotspot of biodiversity 1 1.2 The Bornean rain forest, a vanishing ecosystem under pressure 2 1.3 Impacts of deforestation and forest fragmentation 3 1.4 Molecular markers in conservation genetics 6 1.5 Lower Kinabatangan Wildlife Sanctuary 7 1.6 Bornean small mammal community 9 1.7 Aims and Hypotheses 11 1.8 References 12 Chapter 2 Messing about on the river: The role of geographic barriers in shaping the genetic structure of Bornean small mammals in a fragmented landscape -
Oceanic Islands of Wallacea As a Source for Dispersal and Diversification of Murine Rodents
Received: 1 April 2019 | Revised: 14 August 2019 | Accepted: 28 August 2019 DOI: 10.1111/jbi.13720 RESEARCH PAPER Oceanic islands of Wallacea as a source for dispersal and diversification of murine rodents Kevin C. Rowe1,2 | Anang S. Achmadi3 | Pierre‐Henri Fabre4 | John J. Schenk5 | Scott J. Steppan6 | Jacob A. Esselstyn7,8 1Sciences Department, Museums Victoria, Melbourne, Vic., Australia Abstract 2School of BioSciences, The Univeristy of Aim: To determine the historical dynamics of colonization and whether the relative Melbourne, Parkvillie, Vic., Australia timing of colonization predicts diversification rate in the species‐rich, murine rodent 3Museum Zoologicum Bogoriense, Research Center For Biology, Indonesian Institute of communities of Indo‐Australia. Sciences (LIPI), Cibinong, Indonesia Location: Indo‐Australian Archipelago including the Sunda shelf of continental Asia, 4 Institut des Sciences de Sahul shelf of continental Australia, the Philippines and Wallacea of Indonesia. l'Evolution de Montpellier (ISEM), CNRS, IRD, EPHE, Université de Taxon: Order Rodentia, Family Muridae. Montpellier, Montpellier, France Methods: We used a fossil‐calibrated molecular phylogeny and Bayesian biogeo‐ 5Department of Environmental and Plant graphical modelling to infer the frequency and temporal sequence of biogeographical Biology, Ohio University, Athens, OH, USA 6Department of Biological Science, Florida transitions among Sunda, Sahul, the Philippines and Wallacea. We estimated diver‐ State University, Tallahassee, FL, USA sification rates for each colonizing lineage using a method‐of‐moments estimator of 7 Museum of Natural Science, Louisiana State net diversification and Bayesian mixture model estimates of diversification rate shifts. University, Baton Rouge, LA, USA 8Department of Biological Results: We identified 17 biogeographical transitions, including nine originating from Sciences, Louisiana State University, Baton Sunda, seven originating from Sulawesi and broader Wallacea and one originating Rouge, LA, USA from Sahul. -
(Genus Maxomys) with Descriptions of Two New Species From
Morphological and molecular systematics of Southeast Asian spiny rats (genus Maxomys) with descriptions of two new Title species from Indonesia Author(s) ACHMADI, ANANG SETIAWAN Citation 北海道大学. 博士(環境科学) 乙第7016号 Issue Date 2017-03-23 DOI 10.14943/doctoral.r7016 Doc URL http://hdl.handle.net/2115/68320 Type theses (doctoral) File Information Anang_SetiawanAchmadi.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP Morphological and molecular systematics of Southeast Asian spiny rats (genus Maxomys) with descriptions of two new species from Indonesia Anang Setiawan Achmadi A Thesis Presented to Graduate School of Environmental Science, Hokkaido University, for the Degree of PhD January 2017 Contents SUMMARY 1 PREFACE 4 GENERAL INTRODUCTION 6 CHAPTER I 10 Taxonomic status of spiny rats (Maxomys Jentink, Rodentia) from Indonesia and Malaysia based on morphological study 10 I.1 Introduction 10 I.2 Materials and Methods 12 I.3 Results and Discussion 13 Univariate statistics 13 Multiple regression 13 Morphological variation within genus Maxomys 14 Geographical variation within Maxomys whiteheadi based on morphological characters 15 CHAPTER II 20 Quantitative color variation among species of the Southeast Asian spiny rats genus Maxomys (Rodentia: Muridae) using spectrophotometry 20 II.1 Introduction 20 II.2 Materials and Methods 22 II.3 Results 23 Descriptive analysis 23 PCA and DFA analyses 24 II.4 Discussion 25 CHAPTER III 28 Phylogeny, diversity, and biogeography of Southeast Asian spiny rats (Maxomys) 28 III.1 Introduction 28 III.2 Materials and Methods 31 III.3 Results 35 III.4 Discussion 38 CHAPTER IV 43 Descriptions of two new species of the genus Maxomys from East Kalimantan, Borneo Island and Mount Tompotika, Sulawesi Island 43 IV.1 Introduction 43 IV.2 Materials and Methods 46 Study area and fieldwork 46 Morphological data and analyses 47 IV.3 Results 48 IV.3.1 Description of new species of M. -
YUS Landscape Plan 2013-2015 2 2 YUS LANDSCAPE PLAN Yopno Valley
YUS Landscape Plan 2013-2015 Yopno Valley. Photo: Zachary Wells YUS Landscape Plan 2013-2015 Citation: A landscape plan prepared by Dr. Ashley Brooks (Woodland TKCP (2012) YUS Landscape Plan 2013-2015, Tree Kangaroo Park Zoo’s Tree Kangaroo Conservation Program, Conservation Program, Lae, Papua New Guinea. Landscape and Management Planner), for the people of the YUS Landscape, Morobe Province, Papua New Guinea, 2012. Design: Suzanne Ashmore Graphic Design Acknowledgements: http://www.suzanneashmore.com.au/ The financial support of the German Government within the framework of the International Climate Initiative of the Maps: Federal Ministry for Environment Nature Conservation and All maps prepared by Karau Kuna, TKCP GIS and Mapping Nuclear Safety (BMU), and through KfW Entwicklungbank Coordinator. is gratefully acknowledged as is Conservation International. Additionally the following individuals are thanked for their invaluable contributions throughout the preparation of For further information, contact: this Plan: TKCP, P.O. Box 360, Lae, Morobe Province, Zachary Wells (TKCP), Dr. Lisa Dabek (WPZ), Karua Kuna Papua New Guinea (TKCP), Benjamin Sipa (TKCP), Tingke Dope (TKCP), Ruby Phone: +675 472 7226 Yamuna (TKCP), Danny Samandingke (TKCP), Mikal Nolan Program Manager: [email protected] (TKCP), James Sabi (PNG DEC), Benside Thomas (PNG DEC), Dr. Bruce Beehler (CI). YUS LANDSCAPE PLANYUS 2 Foreword Building on the YUS Conservation Area as the first protected area in Papua New Guinea (PNG) under the PNG Conservation Areas Act, the YUS Landscape Plan is another first for YUS and for PNG. This comprehensive and detailed Plan serves both as a management tool for the YUS Conservation Area as well as a strategic guide for integrated efforts in YUS. -
1 Murinae (Old World Rats and Mice)
Retrieved from "http://en.wikipedia.org/wiki/Murinae" 1 Murinae (Old World rats and mice) 1.1 Fossils 1.2 Scientific classification 1.3 Taxonomy and list of Genera 1.4 References The Old World rats and mice, part of the subfamily Murinae in the family Muridae, comprise at least 519 species. This subfamily is larger than all mammal families except the Cricetidae, and is larger than all mammal orders except the bats and the remainder of the rodents. The Murinae are native to Africa, Europe, Asia, and Australia. They are the only terrestrial placental mammals native to Australia. They have also been introduced to all continents except Antarctica, and are serious pest animals. This is particularly true in island communities where they have contributed to the endangerment and extinction of many native animals. Two prominent murine human commensals have become vital laboratory animals. The Brown Rat and House Mouse are both used as medical subjects and are among a handful of animals where the full genome has been sequenced. The murines have a distinctive molar pattern that involves three rows of cusps instead of two, the primitive pattern seen most frequently in muroid rodents. 1.1 FOSSILS Fossils ranges Middle Miocene – Recent. The first known appearance of the Murinae in the fossil record is about 14 million years ago with the fossil genus Antemus. Antemus is thought to derive directly from Potwarmus, which has a more primitive tooth pattern. Likewise, two genera, Progonomys and Karnimata are thought to derive directly from Antemus. Progonomys is thought to be the ancestor of Mus and relatives, while Karnimata is thought to lead to Rattus and relatives. -
Rodents a World Survey of Species of Conservation Concern
Rodents A World Survey of Species of Conservation Concern Edited by William Z. Lidicker, Jr. IUCN/SSC Rodent Specialist Group Occasional Papers of the IUCN Species Survival Commission (SSC) No. 4 IUCN–The World Conservation Union IUCN Species Survival Commission Role of the SSC 4. To provide advice, information, and expertise to the Secretariat of the The Species Survival Commission (SSC) is IUCN's primary source of the Convention on International Trade in Endangered Species of Wild Fauna scientific and technical information required for the maintenance of biological and Flora (CITES) and other international agreements affecting conser- diversity through the conservation of endangered and vulnerable species of vation of species or biological diversity. fauna and flora, whilst recommending and promoting measures for their con- 5. To carry out specific tasks on behalf of the Union, including: servation, and for the management of other species of conservation concern. • coordination of a programme of activities for the conservation of Its objective is to mobilize action to prevent the extinction of species, sub- biological diversity within the framework of the IUCN Conserva- species and discrete populations of fauna and flora, thereby not only maintain- tion Programme. ing biological diversity but improving the status of endangered and vulnerable species. • promotion of the maintenance of biological diversity by monitor- ing the status of species and populations of conservation concern. • development and review of conservation action plans and priorities Objectives of the SSC for species and their populations. 1. To participate in the further development, promotion and implementa- tion of the World Conservation Strategy; to advise on the development • promotion of implementation of species-oriented conservation of IUCN's Conservation Programme; to support the implementation of action plans and response to related issues.