An Extended Correlation Dimension of Complex Networks
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Evolving Networks and Social Network Analysis Methods And
DOI: 10.5772/intechopen.79041 ProvisionalChapter chapter 7 Evolving Networks andand SocialSocial NetworkNetwork AnalysisAnalysis Methods and Techniques Mário Cordeiro, Rui P. Sarmento,Sarmento, PavelPavel BrazdilBrazdil andand João Gama Additional information isis available atat thethe endend ofof thethe chapterchapter http://dx.doi.org/10.5772/intechopen.79041 Abstract Evolving networks by definition are networks that change as a function of time. They are a natural extension of network science since almost all real-world networks evolve over time, either by adding or by removing nodes or links over time: elementary actor-level network measures like network centrality change as a function of time, popularity and influence of individuals grow or fade depending on processes, and events occur in net- works during time intervals. Other problems such as network-level statistics computation, link prediction, community detection, and visualization gain additional research impor- tance when applied to dynamic online social networks (OSNs). Due to their temporal dimension, rapid growth of users, velocity of changes in networks, and amount of data that these OSNs generate, effective and efficient methods and techniques for small static networks are now required to scale and deal with the temporal dimension in case of streaming settings. This chapter reviews the state of the art in selected aspects of evolving social networks presenting open research challenges related to OSNs. The challenges suggest that significant further research is required in evolving social networks, i.e., existent methods, techniques, and algorithms must be rethought and designed toward incremental and dynamic versions that allow the efficient analysis of evolving networks. Keywords: evolving networks, social network analysis 1. -
Spatial Accessibility to Amenities in Fractal and Non Fractal Urban Patterns Cécile Tannier, Gilles Vuidel, Hélène Houot, Pierre Frankhauser
Spatial accessibility to amenities in fractal and non fractal urban patterns Cécile Tannier, Gilles Vuidel, Hélène Houot, Pierre Frankhauser To cite this version: Cécile Tannier, Gilles Vuidel, Hélène Houot, Pierre Frankhauser. Spatial accessibility to amenities in fractal and non fractal urban patterns. Environment and Planning B: Planning and Design, SAGE Publications, 2012, 39 (5), pp.801-819. 10.1068/b37132. hal-00804263 HAL Id: hal-00804263 https://hal.archives-ouvertes.fr/hal-00804263 Submitted on 14 Jun 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. TANNIER C., VUIDEL G., HOUOT H., FRANKHAUSER P. (2012), Spatial accessibility to amenities in fractal and non fractal urban patterns, Environment and Planning B: Planning and Design, vol. 39, n°5, pp. 801-819. EPB 137-132: Spatial accessibility to amenities in fractal and non fractal urban patterns Cécile TANNIER* ([email protected]) - corresponding author Gilles VUIDEL* ([email protected]) Hélène HOUOT* ([email protected]) Pierre FRANKHAUSER* ([email protected]) * ThéMA, CNRS - University of Franche-Comté 32 rue Mégevand F-25 030 Besançon Cedex, France Tel: +33 381 66 54 81 Fax: +33 381 66 53 55 1 Spatial accessibility to amenities in fractal and non fractal urban patterns Abstract One of the challenges of urban planning and design is to come up with an optimal urban form that meets all of the environmental, social and economic expectations of sustainable urban development. -
Package 'Qgraph'
Package ‘qgraph’ January 28, 2021 Type Package Title Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation Version 1.6.9 Maintainer Sacha Epskamp <[email protected]> Depends R (>= 3.0.0) Imports Rcpp (>= 1.0.0), methods, grDevices, psych, lavaan, plyr, Hmisc, igraph, jpeg, png, colorspace, Matrix, corpcor, reshape2, ggplot2, glasso, fdrtool, gtools, parallel, pbapply, abind, dplyr ByteCompile yes Description Weighted network visualization and analysis, as well as Gaussian graphical model com- putation. See Epskamp et al. (2012) <doi:10.18637/jss.v048.i04>. BugReports https://github.com/SachaEpskamp/qgraph License GPL-2 LazyLoad yes LinkingTo Rcpp Suggests BDgraph, huge NeedsCompilation yes Author Sacha Epskamp [aut, cre], Giulio Costantini [aut], Jonas Haslbeck [aut], Adela Isvoranu [aut], Angelique O. J. Cramer [ctb], Lourens J. Waldorp [ctb], Verena D. Schmittmann [ctb], Denny Borsboom [ctb] Repository CRAN Date/Publication 2021-01-28 20:20:02 UTC 1 2 as.igraph.qgraph R topics documented: as.igraph.qgraph . .2 averageLayout . .3 big5.............................................4 big5groups . .4 centrality . .5 centrality and clustering plots . .7 centrality_auto . .8 clustcoef_auto . 10 cor_auto . 12 EBICglasso . 14 FDRnetwork . 16 flow ............................................. 18 getWmat . 19 ggmFit . 20 ggmModSelect . 21 makeBW . 23 mat2vec . 24 mutualInformation . 25 pathways . 25 plot.qgraph . 26 print.qgraph . 27 qgraph . 28 qgraph.animate . 45 qgraph.layout.fruchtermanreingold . 49 qgraph.loadings -
Sparsity of Weighted Networks: Measures and Applications
Sparsity of weighted networks: measures and applications Swati Goswamiab*, Asit K. Dasa, Subhas C. Nandyb aDepartment of Computer Science and Technology, Indian Institute of Engineering Science and Technology, Shibpur, Howrah – 711103, India bAdvanced Computing and Microelectronics Unit, Indian Statistical Institute, Kolkata, India, Pin 700108 Abstract A majority of real-life networks are weighted and sparse. The present article aims at characterization of weighted networks based on sparsity, as an indicator of inherent diversity of different network parameters. The measure called sparsity index defined on ordered degree sequence of simple networks is extended and new properties of this index are derived. The range of possible values of sparsity index of any connected network, with edge-count in specific intervals, is worked out analytically in terms of node-count and a pattern is uncovered in corresponding degree sequences. Given the edge-weight frequency distribution of a network, an expression of the sparsity index of edge- weights is formulated. Its properties are analyzed under different distributions of edge-weights. For example, the upper and lower bounds of sparsity index of edge-weights of a network, with all distinct edge-weights, is determined in terms of its node-count and edge-density. The article highlights that this summary index with low computational cost, computed on different network parameters, is useful to reveal different structural and organizational aspects of networks for performing analysis. An application of this index is demonstrated through devising a new overlapping community detection method. The results validated on artificial and real-world networks show its efficacy. Keywords Sparsity Index, Sparsity Measure, Gini Index, Edge Weight Distribution, Overlapping Community Detection, Community Detection in Weighted Networks 1. -
Fractal Geometry and Applications in Forest Science
ACKNOWLEDGMENTS Egolfs V. Bakuzis, Professor Emeritus at the University of Minnesota, College of Natural Resources, collected most of the information upon which this review is based. We express our sincere appreciation for his investment of time and energy in collecting these articles and books, in organizing the diverse material collected, and in sacrificing his personal research time to have weekly meetings with one of us (N.L.) to discuss the relevance and importance of each refer- enced paper and many not included here. Besides his interdisciplinary ap- proach to the scientific literature, his extensive knowledge of forest ecosystems and his early interest in nonlinear dynamics have helped us greatly. We express appreciation to Kevin Nimerfro for generating Diagrams 1, 3, 4, 5, and the cover using the programming package Mathematica. Craig Loehle and Boris Zeide provided review comments that significantly improved the paper. Funded by cooperative agreement #23-91-21, USDA Forest Service, North Central Forest Experiment Station, St. Paul, Minnesota. Yg._. t NAVE A THREE--PART QUE_.gTION,, F_-ACHPARToF:WHICH HA# "THREEPAP,T_.<.,EACFi PART" Of:: F_.AC.HPART oF wHIct4 HA.5 __ "1t4REE MORE PARTS... t_! c_4a EL o. EP-.ACTAL G EOPAgTI_YCoh_FERENCE I G;:_.4-A.-Ti_E AT THB Reprinted courtesy of Omni magazine, June 1994. VoL 16, No. 9. CONTENTS i_ Introduction ....................................................................................................... I 2° Description of Fractals .................................................................................... -
Weighted Network Analysis Steve Horvath
Weighted Network Analysis Steve Horvath Weighted Network Analysis Applications in Genomics and Systems Biology ABC Steve Horvath Professor of Human Genetics and Biostatistics University of California, Los Angeles Los Angeles, CA 90095-7088, USA [email protected] ISBN 978-1-4419-8818-8 e-ISBN 978-1-4419-8819-5 DOI 10.1007/978-1-4419-8819-5 Springer New York Dordrecht Heidelberg London Library of Congress Control Number: 2011925163 c Springer Science+Business Media, LLC 2011 All rights reserved. This work may not be translated or copied in whole or in part without the written permission of the publisher (Springer Science+Business Media, LLC, 233 Spring Street, New York, NY 10013, USA), except for brief excerpts in connection with reviews or scholarly analysis. Use in connection with any form of information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed is forbidden. The use in this publication of trade names, trademarks, service marks, and similar terms, even if they are not identified as such, is not to be taken as an expression of opinion as to whether or not they are subject to proprietary rights. Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) To Lora, my brother Markus, my parents, Joseph O’Brien and Joerg Zimmermann Preface The past decade has seen an incredible growth of network methods following publications by Laszlo Barabasi and others. Excellent text books exist on general networks and graph theory, but these books typically describe unweighted networks. -
Equivalent Relation Between Normalized Spatial Entropy and Fractal Dimension
Equivalent Relation between Normalized Spatial Entropy and Fractal Dimension Yanguang Chen (Department of Geography, College of Urban and Environmental Sciences, Peking University, Beijing 100871, P.R. China. E-mail: [email protected]) Abstract: Fractal dimension is defined on the base of entropy, including macro state entropy and information entropy. The generalized correlation dimension of multifractals is based on Renyi entropy. However, the mathematical transform from entropy to fractal dimension is not yet clear in both theory and practice. This paper is devoted to revealing the new equivalence relation between spatial entropy and fractal dimension using functional box-counting method. Based on varied regular fractals, the numerical relationship between spatial entropy and fractal dimension is examined. The results show that the ratio of actual entropy (Mq) to the maximum entropy (Mmax) equals the ratio of actual dimension (Dq) to the maximum dimension (Dmax). The spatial entropy and fractal dimension of complex spatial systems can be converted into one another by means of functional box-counting method. The theoretical inference is verified by observational data of urban form. A conclusion is that normalized spatial entropy is equal to normalized fractal dimension. Fractal dimensions proved to be the characteristic values of entropies. In empirical studies, if the linear size of spatial measurement is small enough, a normalized entropy value is infinitely approximate to the corresponding normalized fractal dimension value. Based on the theoretical result, new spatial measurements of urban space filling can be defined, and multifractal parameters can be generalized to describe both simple systems and complex systems. Key words: spatial entropy; multifractals; functional box-counting method; space filling; urban form; Chinese cities 2 1. -
Determination of Lyapunov Exponents in Discrete Chaotic Models
International Journal of Theoretical & Applied Sciences, 4(2): 89-94(2012) ISSN No. (Print) : 0975-1718 ISSN No. (Online) : 2249-3247 DeterminationISSN No. (Print) of Lyapunov: 0975-1718 Exponents in Discrete Chaotic Models ISSN No. (Online) : 2249-3247 Dr. Nabajyoti Das Department of Mathematics, J.N. College Kamrup, Assam, India (Received 21 October, 2012, Accepted 02 November, 2012) ABSTRACT: This paper discusses the Lyapunov exponents as a quantifier of chaos with two dimensional discrete chaotic model: F(x,y) = (y, µx+λy – y3 ), Where, µ and λ are adjustable parameters. Our prime objective is to find First Lyapunov exponent, Second Lyapunov exponent and Maximal Lyapunov exponent as the notion of exponential divergence of nearby trajectories indicating the existence of chaos in our concerned map. Moreover, these results have paused many challenging open problems in our field of research. Key Words: Discrete System/ Lyapunov Exponent / Quantifier of Chaos 2010 AMS Subject Classification : 37 G 15, 37 G 35, 37 C 45 I. INTRODUCTION component in the direction associated with the MLE, Distinguishing deterministic chaos from noise has and because of the exponential growth rate the effect become an important problem in many diverse fields of the other exponents will be obliterated over time. This is due, in part, to the availability of numerical For a dynamical system with evolution equation ft in algorithms for quantifying chaos using experimental a n–dimensional phase space, the spectrum of time series. In particular, methods exist for Lyapunov exponents in general, depends on the calculating correlation dimension (D2) Kolmogorov starting point x0. However, we are usually interested entropy, and Lyapunov exponents. -
Correlation Dimension for Self-Similar Cantor Sets with Overlaps
FUNDAMENTA MATHEMATICAE 155 (1998) Correlation dimension for self-similar Cantor sets with overlaps by K´arolyS i m o n (Miskolc) and Boris S o l o m y a k (Seattle, Wash.) Abstract. We consider self-similar Cantor sets Λ ⊂ R which are either homogeneous and Λ − Λ is an interval, or not homogeneous but having thickness greater than one. We have a natural labeling of the points of Λ which comes from its construction. In case of overlaps among the cylinders of Λ, there are some “bad” pairs (τ, ω) of labels such that τ and ω label the same point of Λ. We express how much the correlation dimension of Λ is smaller than the similarity dimension in terms of the size of the set of “bad” pairs of labels. 1. Introduction. In the literature there are some results (see [Fa1], [PS] or [Si] for a survey) which show that for a family of Cantor sets of overlapping construction on R, the dimension (Hausdorff or box counting) is almost surely equal to the similarity dimension, that is, the overlap between the cylinders typically does not lead to dimension drop. However, we do not understand the cause of the decrease of dimension in the exceptional cases. In this paper we consider self-similar Cantor sets Λ on R for which either the thickness of Λ is greater than one or Λ is homogeneous and Λ − Λ is an interval. We prove that the only reason for the drop of the correlation dimension is the size of the set of those pairs of symbolic sequences which label the same point of the Cantor set. -
Knowledge Discovery in Scientific Databases Using Text Mining and Social Network Analysis
2012 IEEE Conference on Control, Systems and Industrial Informatics (ICCSII) Bandung, Indonesia, September 23-26,2012 Knowledge Discovery in Scientific Databases Using Text Mining and Social Network Analysis Ammar lalalimanesh Information Engineering Department Iranian Research Institute for Information Science and Technology Tehran, Iran [email protected] Abstract-This paper introduces a novel methodology to extract IRANDOC duties, and thereforeo, analyzing theses contents is core concepts from text corpus. This methodology is based on an interesting research domain for it. text mining and social network analysis. At the text mining phase the keywords are extracted by tokenizing, removing stop-lists In this research we tried to discover core concepts from and generating N-grams. Network analysis phase includes co theses repository by applying text mining methods and SNA word occurrence extraction, network representation of linked techniques. Accordingly 650 M.Sc and PhD theses were terms and calculating centrality measure. We applied our selected as test corpus. The text mining routines were applied methodology on a text corpus including 650 thesis titles in the on theses titles. First, key phrases were extracted from theses domain of Industrial engineering. Interpreting enriched titles. Next the network of co-word occurrence was drawn. networks was interesting and gave us valuable knowledge about Finally centrality measures were calculated for central words. corpus content. To conclude we tried to demonstrate these measures visually and to interpret them by exploring enriched network. Keywords-Text nunmg; Social network analysis,' Industrial engineering; concept mapping; Knowledge discovery The organization of this paper is as follows. In the second section, we review related works and experiences in the context I. -
Assortativity Measures for Weighted and Directed Networks
Assortativity measures for weighted and directed networks Yelie Yuan1, Jun Yan1, and Panpan Zhang2,∗ 1Department of Statistics, University of Connecticut, Storrs, CT 06269 2Department of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA 19104 ∗Corresponding author: [email protected] January 15, 2021 arXiv:2101.05389v1 [stat.AP] 13 Jan 2021 Abstract Assortativity measures the tendency of a vertex in a network being connected by other ver- texes with respect to some vertex-specific features. Classical assortativity coefficients are defined for unweighted and undirected networks with respect to vertex degree. We propose a class of assortativity coefficients that capture the assortative characteristics and structure of weighted and directed networks more precisely. The vertex-to-vertex strength correlation is used as an example, but the proposed measure can be applied to any pair of vertex-specific features. The effectiveness of the proposed measure is assessed through extensive simula- tions based on prevalent random network models in comparison with existing assortativity measures. In application World Input-Ouput Networks, the new measures reveal interesting insights that would not be obtained by using existing ones. An implementation is publicly available in a R package wdnet. 1 Introduction In traditional network analysis, assortativity or assortative mixing (Newman, 2002) is a mea- sure assessing the preference of a vertex being connected (by edges) with other vertexes in a network. The measure reflects the principle of homophily (McPherson et al., 2001)|the tendency of the entities to be associated with similar partners in a social network. The prim- itive assortativity measure proposed by Newman(2002) was defined to study the tendency of connections between nodes based on their degrees, which is why it is also called degree-degree correlation (van der Hofstad and Litvak, 2014). -
Arxiv:2010.07103V2 [Physics.Data-An] 4 Dec 2020 Often Shows Superior Performance
Breaking Symmetries of the Reservoir Equations in Echo State Networks Joschka Herteux1, a) and Christoph R¨ath1, b) Institut f¨urMaterialphysik im Weltraum, Deutsches Zentrum f¨urLuft- und Raumfahrt, M¨unchnerStr. 20, 82234 Wessling, Germany (Dated: 7 December 2020) Reservoir computing has repeatedly been shown to be extremely successful in the prediction of nonlinear time-series. However, there is no complete understanding of the proper design of a reservoir yet. We find that the simplest popular setup has a harmful symmetry, which leads to the prediction of what we call mirror- attractor. We prove this analytically. Similar problems can arise in a general context, and we use them to explain the success or failure of some designs. The symmetry is a direct consequence of the hyperbolic tangent activation function. Further, four ways to break the symmetry are compared numerically: A bias in the output, a shift in the input, a quadratic term in the readout, and a mixture of even and odd activation functions. Firstly, we test their susceptibility to the mirror-attractor. Secondly, we evaluate their performance on the task of predicting Lorenz data with the mean shifted to zero. The short-time prediction is measured with the forecast horizon while the largest Lyapunov exponent and the correlation dimension are used to represent the climate. Finally, the same analysis is repeated on a combined dataset of the Lorenz attractor and the Halvorsen attractor, which we designed to reveal potential problems with symmetry. We find that all methods except the output bias are able to fully break the symmetry with input shift and quadratic readout performing the best overall.