Fadel, A. EVMPSJ 2021; 17:20-34
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12-15 Eylül 2017 Tarihleri Arasında Üniversitemiz Ahmet Muhip Dıranas Uygulama Oteli’Nde Gerçekleştirilen “19
s u s e m p 2 0 1 7 . s i n o 19. ULUSAL SU ÜRÜNLERİ SEMPOZYUMU p . e d u . t r BİLDİRİ ÖZET KİTABI 19. ULUSAL SU ÜRÜNLERİ SEMPOZYUMU BİLDİRİ ÖZET KİTABI 19. Ulusal Su Ürünleri Sempozyumu Bildiri Özet Kitabı'nda yayınlanan bildiri özetlerinin bilimsel içeriğine ilişkin her türlü hukuki sorumluluk ve imla hatalarının sorumluluğu yazarlara aittir. SUNUŞ Üniversitemiz her geçen gün gelişen ve büyüyen yapısıyla öğrencilerine kaliteli bir eğitim sunarken diğer yandan bölgesinin bilimsel ve sektörel gelişimi için de önemli faaliyetler yürütmektedir. Sinop Üniversitesi olarak; her yıl iki sempozyum, iki çalıştay ve iki bilimsel toplantı yapmayı hedeflemekte; düzenlenen her bilimsel organizasyon ile şehrimize ve bölgemize değer katmayı amaçlamaktayız. Bu kapsamda 12-15 Eylül 2017 tarihleri arasında Üniversitemiz Ahmet Muhip Dıranas Uygulama Oteli’nde gerçekleştirilen “19. Ulusal Su Ürünleri Sempozyumu” akademisyenleri ve sektör temsilcilerini Karadeniz’in incisi Sinop’ta bir araya getirmiştir. Sempozyuma su ürünlerinin çok çeşitli alanlarında yapılan araştırmaları ile katılan değerli bilim insanları, sektör temsilcileri ve tüm katılımcıları Sinop Üniversitesi bünyesinde ve Sinop’ta ağırlamaktan mutluluk duyduğumu belirtmek isterim. Ayrıca, sempozyumun düzenlenmesinde emeği geçen tüm çalışma arkadaşlarıma, kurumlara ve sektör mensuplarına üniversitem ve şahsım adına teşekkür ediyorum. Sempozyumda sunulan bildiri özetlerinden oluşan, 19. Ulusal Su Ürünleri Sempozyumu Bildiri Kitabı’nın, su ürünleri alanında yapılacak yeni çalışmalara ve sektöre -
A Cryptic Complex of Species Related to Transversotrema Licinum Manter, 1970 from Fishes of the Indo-West Pacific, Including
Zootaxa 3176: 1–44 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) A cryptic complex of species related to Transversotrema licinum Manter, 1970 from fishes of the Indo-West Pacific, including descriptions of ten new species of Transversotrema Witenberg, 1944 (Digenea: Transversotrematidae) JANET A. HUNTER1 & THOMAS H. CRIBB2 School of Biological Sciences. The University of Queensland, Brisbane, Queensland, 4072, Australia. E-mail: [email protected]; [email protected]. Table of contents Abstract . 2 Introduction . 2 Material and methods . 3 Results . 6 Molecular analyses . 11 Host and geographical distribution . 15 Intensities. 15 Morphology . 17 Family Transversotrematidae Witenberg, 1944. 17 Genus Transversotrema Witenberg, 1944 . 17 Transversotrema licinum Manter, 1970. 17 Transversotrema atkinsoni n. sp. 20 Transversotrema borboleta n. sp. 21 Transversotrema cardinalis n. sp. 24 Transversotrema carmenae n. sp. 26 Transversotrema damsella n. sp . 27 Transversotrema espanola n. sp . 29 Transversotrema fusilieri n. sp . 30 Transversotrema manteri n. sp . 31 Transversotrema nova n. sp. 33 Transversotrema witenbergi n. sp. 34 Unnamed species . 36 Transversotrema sp. A . 36 Transversotrema sp. B . 36 Transversotrema sp. C . 36 Transversotrema sp. D . 36 Discussion . 37 Acknowledgments . 42 References . 42 Accepted by N. Dronen: 15 Nov. 2011; published: 27 Jan. 2012 1 Abstract Transversotrema licinum Manter, 1970 was described from two species of fishes from Moreton Bay, Queensland, and sub- sequently reported from 13 further species from six families in the Indo–West Pacific region. This study records specimens morphologically similar to T. licinum from 48 fish species from 11 families. -
Disentangling the Genetics of Coevolution in Potamopyrgus
DISENTANGLING THE GENETICS OF COEVOLUTION IN POTAMOPYRGUS ANTIPODARUM AND MICROPHALLUS SP. By CHRISTINA E JENKINS A dissertation submitted in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY WASHINGTON STATE UNIVERSITY School of Biological Sciences JULY 2016 © Copyright by CHRISTINA E JENKINS, 2016 All Rights Reserved © Copyright by CHRISTINA E JENKINS, 2016 All Rights Reserved To the Faculty of Washington State University: The members of the Committee appointed to examine the dissertation of CHRISTINA E JENKINS find it satisfactory and recommend that it be accepted. Mark Dybdahl, Ph.D., Chair Scott Nuismer, Ph.D. Joanna Kelley, Ph.D. Jeb Owen, Ph.D. ii Acknowledgement First and foremost, I need to thank my committee, Mark Dybdahl, Scott Nuismer, Joanna Kelley and Jeb Owen. They have put in a considerable amount of time helping me grow and learn as a scientist, and have consistently challenged me to be better during my Ph.D. studies. I cannot find words to thank them enough, so for now, “thank you” will need to suffice. I especially thank Mark and Scott; coadvising was an adventure and one I embarked on gladly. Thank you for all the input and effort, even when it made all three of us cranky. I need to thank the undergraduates and field assistants that have worked for and with me to collect data, process samples, plan field seasons and generally make my life easier. Thanks to Jared and Caitlin for their tireless work (seriously, hours upon hours of their time) running flow cytometry to answer questions about polyploidy. Thank you to Meredith and Jordan for collecting snails, through sand flies, rain, hangovers, and occasionally hypothermia. -
Parasites and Cleaning Behaviour in Damselfishes Derek
Parasites and cleaning behaviour in damselfishes Derek Sun BMarSt, Honours I A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2015 School of Biological Sciences i Abstract Pomacentrids (damselfishes) are one of the most common and diverse group of marine fishes found on coral reefs. However, their digenean fauna and cleaning interactions with the bluestreak cleaner wrasse, Labroides dimidiatus, are poorly studied. This thesis explores the digenean trematode fauna in damselfishes from Lizard Island, Great Barrier Reef (GBR), Australia and examines several aspects of the role of L. dimidiatus in the recruitment of young damselfishes. My first study aimed to expand our current knowledge of the digenean trematode fauna of damselfishes by examining this group of fishes from Lizard Island on the northern GBR. In a comprehensive study of the digenean trematodes of damselfishes, 358 individuals from 32 species of damselfishes were examined. I found 19 species of digeneans, 54 host/parasite combinations, 18 were new host records, and three were new species (Fellodistomidae n. sp., Gyliauchenidae n. sp. and Pseudobacciger cheneyae). Combined molecular and morphological analyses show that Hysterolecitha nahaensis, the single most common trematode, comprises a complex of cryptic species rather than just one species. This work highlights the importance of using both techniques in conjunction in order to identify digenean species. The host-specificity of digeneans within this group of fishes is relatively low. Most of the species possess either euryxenic (infecting multiple related species) or stenoxenic (infecting a diverse range of hosts) specificity, with only a handful of species being convincingly oioxenic (only found in one host species). -
Two Known and One New Species of Proctoeces from Australian Teleosts
ÔØ ÅÒÙ×Ö ÔØ Two known and one new species of Proctoeces from Australian teleosts: Vari- able host-specificity for closely related species identified through multi-locus molecular data Nicholas Q-X. Wee, Thomas H. Cribb, Rodney A. Bray, Scott C. Cut- more PII: S1383-5769(16)30180-5 DOI: doi: 10.1016/j.parint.2016.11.008 Reference: PARINT 1601 To appear in: Parasitology International Received date: 8 June 2016 Revised date: 4 November 2016 Accepted date: 4 November 2016 Please cite this article as: Wee Nicholas Q-X., Cribb Thomas H., Bray Rodney A., Cut- more Scott C., Two known and one new species of Proctoeces from Australian teleosts: Variable host-specificity for closely related species identified through multi-locus molec- ular data, Parasitology International (2016), doi: 10.1016/j.parint.2016.11.008 This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. ACCEPTED MANUSCRIPT Two known and one new species of Proctoeces from Australian teleosts: variable host- specificity for closely related species identified through multi-locus molecular data Nicholas Q-X. Wee a, Thomas H. Cribb a,*, Rodney A. Bray b, and Scott C. Cutmore a a The University of Queensland, School of Biological Sciences, St Lucia, Queensland, 4072, Australia b Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom * Corresponding author at: The University of Queensland, School of Biological Sciences, St Lucia, Queensland, 4072, Australia. -
307979 1 En Bookbackmatter 631..693
Appendix Host–Parasite list: Indian Marine fish hosts and their digenean parasites in alpha- betical order Host taxon Digenean Phylum: Chordata (Craniata) Class Chondrichthyes Family Dasyatidae Brevitrygon imbricatus Orchispirium heterovitellatum Himantura uarnak Petalodistomum yamagutia Family Carcharhinidae Galeocerdo cuvier Anaporrhutum gigas, Staphylorchis cymatodes Galeocerdo tigrinus Scoliodon dumerilii Anaporrhutum stunkardi Scoliodon laticaudus Staphylorchis cymatodes Scoliodon sorrakowah Anaporrhutum scoliodoni Family Myliobatidae Mobula mobular Anaporrhutum narayani Sphyrnidae Sphyrna zygaenae Family Stegostomidae Prosogonotrema zygaenae Stegostoma faciatum Anaporrhutum largum (Hermann) Family Torpedinidae Anaporrhutum albidum Narcine timlei Family Trigonidae Petalodistomum hanumanthai, Petalodistomum singhi Trigon imbricatus Lecithocladium excisiforme Trigon sp. Class Actinopterygii Family Acanthuridae (continued) © Crown 2018 631 R. Madhavi and R. Bray, Digenetic Trematodes of Indian Marine Fishes, https://doi.org/10.1007/978-94-024-1535-3 632 Appendix (continued) Host taxon Digenean Aanthurus berda Erilepturus berda (=E. hamati), E. orientalis (=E. hamati) Acanthurus bleekeri Aponurus theraponi Acanthurus mata Aponurus laguncula, Opisthogonoporoides acanthuri, Opisthogonoporoides hanumnthai, Pseudocreadium indicium Acanthurus sandvicensis Haplosplanchnus stunkardi (=H. caudatus); Helostomatis simhai Acanthurus triostegus Haplosplanchnus bengalensis, Haplosplanchnus caudatus, Haplosplanchnus stunkardi, Helostomatis simhai, Stomachicola -
Pholeter Gastrophilus, from Cetaceans
RESEARCH ARTICLE Long-Distance Travellers: Phylogeography of a Generalist Parasite, Pholeter gastrophilus, from Cetaceans Natalia Fraija-FernaÂndez1☯*, Mercedes FernaÂndez1☯, Kristina Lehnert2, Juan Antonio Raga1, Ursula Siebert2, Francisco Javier Aznar1☯ 1 Cavanilles Institute of Biodiversity and Evolutionary Biology, Science Park, University of Valencia, Paterna, Valencia, Spain, 2 Institute for Terrestrial and Aquatic Wildlife Research, University of Veterinary Medicine Hannover, Werftstrasse, BuÈsum, Germany a1111111111 a1111111111 ☯ These authors contributed equally to this work. a1111111111 * [email protected] a1111111111 a1111111111 Abstract We studied the phylogeography and historical demography of the most generalist digenean from cetaceans, Pholeter gastrophilus, exploring the effects of isolation by distance, ecologi- OPEN ACCESS cal barriers and hosts' dispersal ability on the population structure of this parasite. The ITS2 Citation: Fraija-FernaÂndez N, FernaÂndez M, Lehnert K, Raga JA, Siebert U, Aznar FJ (2017) Long- rDNA, and the mitochondrial COI and ND1 from 68 individual parasites were analysed. Distance Travellers: Phylogeography of a Generalist Worms were collected from seven oceanic and coastal cetacean species from the south Parasite, Pholeter gastrophilus, from Cetaceans. western Atlantic (SWA), central eastern Atlantic, north eastern Atlantic (NEA), and Mediter- PLoS ONE 12(1): e0170184. doi:10.1371/journal. ranean Sea. Pholeter gastrophilus was considered a single lineage because reciprocal pone.0170184 monophyly -
Small Subunit Rdna and the Platyhelminthes: Signal, Noise, Conflict and Compromise
Chapter 25 In: Interrelationships of the Platyhelminthes (eds. D.T.J. Littlewood & R.A. Bray) ____________________________________________________________________________________________________________ 25 SMALL SUBUNIT RDNA AND THE PLATYHELMINTHES: SIGNAL, NOISE, CONFLICT AND COMPROMISE D. Timothy J. Littlewood and Peter D. Olson The strategies of gene sequencing and gene characterisation in phylogenetic studies are frequently determined by a balance between cost and benefit, where benefit is measured in terms of the amount of phylogenetic signal resolved for a given problem at a specific taxonomic level. Generally, cost is far easier to predict than benefit. Building upon existing databases is a cost-effective means by which molecular data may rapidly contribute to addressing systematic problems. As technology advances and gene sequencing becomes more affordable and accessible to many researchers, it may be surprising that certain genes and gene products remain favoured targets for systematic and phylogenetic studies. In particular, ribosomal DNA (rDNA), and the various RNA products transcribed from it continue to find utility in wide ranging groups of organisms. The small (SSU) and large subunit (LSU) rDNA fragments especially lend themselves to study as they provide an attractive mix of constant sites that enable multiple alignments between homologues, and variable sites that provide phylogenetic signal (Hillis and Dixon 1991; Dixon and Hillis 1993). Ribosomal RNA (rRNA) is also the commonest nucleic acid in any cell and thus was the prime target for sequencing in both eukaryotes and prokaryotes during the early history of SSU nucleotide based molecular systematics (Olsen and Woese 1993). In particular, the SSU gene (rDNA) and gene product (SSU rRNA1) have become such established sources of taxonomic and systematic markers among some taxa that databanks dedicated to the topic have been developed and maintained with international and governmental funding (e.g. -
Bio 207 Course Title: Lower Invertebrates
NATIONAL OPEN UNIVERSITY OF NIGERIA COURSE CODE : BIO 207 COURSE TITLE: LOWER INVERTEBRATES Course Code & Course Title: BIO 207: Lower Invertebrates Course Writer: Dr. Patrick A. Audu Course Editor Programme Leader Dr. Ado Baba Ahmed National Open University of Nigeria, Lagos Course Coordinator Mr. Adams, Abiodun E National Open University of Nigeria, Lagos NATIONAL OPEN UNIVERSITY OF NIGERIA (NOUN) TABLE OF CONTENTS CONTENTS PAGE GENERAL INTRODUCTION …………………………………………… 1 MODULE 1: TAXONOMY OF INVERTEBRATES …………………… 2 Unit 1: Classification of Organisms …………………………………. 3 Unit 2: General Classification of Invertebrates…………………….. 7 Unit 3: A Systematic Approach to Lower Invertebrate Structure and Levels of Organization …………………………………. 10 Unit 4: Phylum Sarcomastigophora ………………………………… 16 Unit 5: Phylum Ciliophora …………………………………………... 21 MODULE 2: THE STRUCTURE AND LEVEL OF ORGANIZATION OF THE MESOZOA, PARAZOA AND METAZOA ……. 26 Unit 1: Mesozoa ………………………………………………………. 26 Unit 2: Parazoa ……………………………………………………….. 30 Unit 3: Classification and Characteristics of the Poriferans ………. 37 Unit 4: The Metazoa ………………………………………………….. 41 Unit 5: The phylum Cnidaria ………………………………………... 47 MODULE 3: STRUCTURE AND LEVELS OF ORGANIZATION OF THE PLATYHELMINTHES …………………………… 52 Unit 1: The Phylum Platyhelminthes …………………………………. 52 Unit 2: The Turbellaria ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,, 55 Unit 3: The Trematoda …………………………………………………. 60 Unit 4: Class Cestoidea (Cestoda) ……………………………………… 64 Unit 5: The Phylum Nematoda ………………………………………… 71 THE LOWER INVERTEBRATES General Introduction Earlier, you studied all animals together under the broad subject Animalia. From this level on, we shall be examining their classification, characteristics and economic importance. All animals along with the animal like organisms can be classified into two main groups, namely invertebrates - animals (and animal-like organisms) without backbone and vertebrates - animals with backbone. The invertebrates are grouped into two; the lower invertebrates and the higher invertebrates. -
RVC OPEN ACCESS REPOSITORY – COPYRIGHT NOTICE This Is The
RVC OPEN ACCESS REPOSITORY – COPYRIGHT NOTICE This is the peer reviewed version of the following article: Cribb, T H and Bott, N J and Bray, R A and McNamara, M K A and Miller, T L and Nolan, M J and Cutmore, S C (2014) Trematodes of the Great Barrier Reef, Australia: emerging patterns of diversity and richness in coral reef fishes. International Journal for Parasitology, 44 (12). pp. 929-939 The final publication is available from the journal site via http://dx.doi.org/10.1016/j.ijpara.2014.08.002 The full details of the published version of the article are as follows: TITLE: Trematodes of the Great Barrier Reef, Australia: emerging patterns of diversity and richness in coral reef fishes AUTHORS: Thomas H. Cribb, Nathan J. Bott, Rodney A. Bray, Marissa K.A. McNamara, Terrence L. Miller, Mathew J. Nolan, Scott C. Cutmore JOURNAL TITLE: International Journal for Parasitology VOLUME/EDITION: 44/12 PUBLICATION DATE: October 2014 DOI: 10.1016/j.ijpara.2014.08.002 © 2015. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/ 1 Trematodes of the Great Barrier Reef, Australia: emerging patterns of diversity and 2 richness in coral reef fishes 3 4 Thomas H. Cribba,*, Nathan J. Bottb, Rodney A. Brayc, Marissa K. A. McNamarad, Terrence 5 L. Millere, Mathew J. Nolanf, Scott C. Cutmorea 6 7 a The University of Queensland, School of Biological Sciences, Brisbane, Queensland 4072, 8 Australia 9 b School of Applied Sciences, RMIT University, PO Box 71, Bundoora, Victoria 3083, 10 Australia 11 c Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, 12 United Kingdom 13 d Natural Environments Program, Queensland Museum, South Brisbane, Queensland 4101, 14 Australia 15 e School of Marine and Tropical Biology, James Cook University, Cairns, Queensland 4878, 16 Australia 17 f Department of Pathology and Pathogen Biology, Royal Veterinary College, Hawkshead 18 Lane, North Mymms, Hatfield, Hertfordshire AL9 7TA, United Kingdom 19 20 * Corresponding author. -
Population Biology and Landscape Ecology of Digenetic
POPULATION BIOLOGY AND LANDSCAPE ECOLOGY OF DIGENETIC TREMATODE PARASITES IN THEIR GASTROPOD HOSTS, WITH SPECIAL EMPHASIS ON ECHINOSTOMA SPP. BY MICHAEL R. ZIMMERMANN A Dissertation Submitted to the Graduate Faculty of WAKE FOREST UNIVERSITY GRADUATE SCHOOL OF ARTS AND SCIENCE in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY Biology May 2014 Winston-Salem, North Carolina Approved By: Gerald W. Esch, Ph.D., Advisor Michael V. K. Sukhdeo, Ph.D., Chair Herman E. Eure, Ph.D. Erik C. Johnson, Ph.D. Miles Silman, Ph.D. Clifford W. Zeyl, Ph.D. ACKNOWLEDGEMENTS This dissertation could not have been completed without the help of a number of people along the way. First and foremost, this body of work would not have been the same without the collaboration and mentorship of Dr. Esch. His knowledge of parasitology, ecology, and sheer excitement for biology and discovering the unknown after nearly 50 years of mentorship were truly inspiring and helped shape me into the biologist, researcher, and person I am today. I will forever be grateful for his influence. I also would like to thank my committee members, Drs Eure, Johnson, Silman, Sukhdeo, and Zeyl for providing feedback, lab space , and endless banter that have greatly improved this dissertation. Additionally, I am also grateful to have spent my time at Wake Forest during both my Master’s degree and Ph.D. with fellow lab mate Kyle Luth. His input into data interpretation, statistical analyses, and writing has greatly improved my skills as a scientist. If you are going to spend 10 weeks in a van collecting snails, fishing, and camping with somebody, you better get along with them, and Kyle and I have become great friends as a result. -
Review of the Impacts of Introduced Ornamental Fish Species That Have Established Wild Populations in Australia
REPORT TO THE AUSTRALIAN GOVERNMENT DEPARTMENT OF THE ENVIRONMENT, WATER, HERITAGE AND THE ARTS Review of the impacts of introduced ornamental fish species that have established wild populations in Australia Prepared by: J. Corfield, NIWA Australia B. Diggles, DigsFish Services C. Jubb, Burnbank Consulting R. M. McDowall, NIWA A. Moore, Spring Creek Environmental Consulting A. Richards, Meyrick & Associates D. K. Rowe, NIWA © Commonwealth of Australia. Published May 2008. Information contained in this publication may be copied or reproduced for study, research, information or educational purposes, subject to inclusion of an acknowledgment of the source. This report should be cited as: Corfield, J., Diggles, B., Jubb, C., McDowall, R. M., Moore, A., Richards, A. and Rowe, D. K. (2008). Review of the impacts of introduced ornamental fish species that have established wild populations in Australia’. Prepared for the Australian Government Department of the Environment, Water, Heritage and the Arts. The views and opinions expressed in this publication are those of the authors and do not necessarily reflect those of the Commonwealth Government or the Commonwealth Minister for the Environment, Heritage and the Arts. While reasonable efforts have been made to ensure that the contents of this publication are factually correct, the Commonwealth does not accept responsibility for the accuracy or completeness of the contents, and shall not be liable for any loss or damage that may be occasioned directly or indirectly through the use of, or reliance on, the contents of this publication. Copies available at www.environment.gov.au/biodiversity/publications/index.html Author affiliations: J. Corfield. NIWA Australia Pty.